Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0795960 | XP_003611279.1 | 95.862 | 290 | 8 | 2 | 1 | 286 | 1 | 290 | 0.0 | 564 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0795960 | G7JW04 | 95.862 | 290 | 8 | 2 | 1 | 286 | 1 | 290 | 0.0 | 564 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0036430 | Msa0795960 | 0.801775 | 7.681036e-49 | -8.615850e-47 |
| Msa0631120 | Msa0795960 | 0.804554 | 2.042918e-49 | -8.615850e-47 |
| Msa0741900 | Msa0795960 | 0.836229 | 1.057335e-56 | -8.615850e-47 |
| Msa0750880 | Msa0795960 | 0.802734 | 4.874957e-49 | -8.615850e-47 |
| Msa0754230 | Msa0795960 | 0.961265 | 1.676112e-119 | -8.615850e-47 |
| Msa0795960 | Msa0810020 | 0.840047 | 1.099685e-57 | -8.615850e-47 |
| Msa0795960 | Msa0850500 | 0.805934 | 1.050414e-49 | -8.615850e-47 |
| Msa0795960 | Msa0853320 | 0.801182 | 1.015932e-48 | -8.615850e-47 |
| Msa0795960 | Msa0862100 | 0.832513 | 9.059149e-56 | -8.615850e-47 |
| Msa0795960 | Msa0885060 | 0.812763 | 3.598725e-51 | -8.615850e-47 |
| Msa0795960 | Msa0896750 | 0.809135 | 2.197756e-50 | -8.615850e-47 |
| Msa0795960 | Msa0923330 | 0.800969 | 1.122835e-48 | -8.615850e-47 |
| Msa0795960 | Msa0936340 | 0.800526 | 1.383128e-48 | -8.615850e-47 |
| Msa0795960 | Msa0936410 | 0.800720 | 1.262401e-48 | -8.615850e-47 |
| Msa0795960 | Msa0937550 | 0.813907 | 2.018511e-51 | -8.615850e-47 |
| Msa0795960 | Msa0961690 | 0.829304 | 5.547933e-55 | -8.615850e-47 |
| Msa0795960 | Msa1037920 | 0.818077 | 2.365454e-52 | -8.615850e-47 |
| Msa0795960 | Msa1073350 | 0.802085 | 6.630411e-49 | -8.615850e-47 |
| Msa0795960 | Msa1113850 | 0.806711 | 7.203204e-50 | -8.615850e-47 |
| Msa0795960 | Msa1129980 | 0.820828 | 5.579219e-53 | -8.615850e-47 |
| Msa0795960 | Msa1139810 | 0.815875 | 7.388438e-52 | -8.615850e-47 |
| Msa0795960 | Msa1303250 | 0.808812 | 2.577195e-50 | -8.615850e-47 |
| Msa0795960 | Msa1353060 | 0.801643 | 8.173156e-49 | -8.615850e-47 |
| Msa0795960 | Msa1420060 | 0.822683 | 2.077593e-53 | -8.615850e-47 |
| Msa0130570 | Msa0795960 | 0.812430 | 4.256507e-51 | -8.615850e-47 |
| Msa0191040 | Msa0795960 | 0.800012 | 1.759307e-48 | -8.615850e-47 |
| Msa0197930 | Msa0795960 | 0.811205 | 7.865672e-51 | -8.615850e-47 |
| Msa0203030 | Msa0795960 | 0.808281 | 3.345693e-50 | -8.615850e-47 |
| Msa0219190 | Msa0795960 | 0.809474 | 1.858618e-50 | -8.615850e-47 |
| Msa0392490 | Msa0795960 | 0.800122 | 1.671208e-48 | -8.615850e-47 |
| Msa0436500 | Msa0795960 | 0.820402 | 6.988930e-53 | -8.615850e-47 |
| Msa0464540 | Msa0795960 | 0.800923 | 1.147604e-48 | -8.615850e-47 |
| Msa0317280 | Msa0795960 | 0.806550 | 7.791317e-50 | -8.615850e-47 |
| Msa0487630 | Msa0795960 | 0.800169 | 1.634683e-48 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0795960 | MtrunA17_Chr5g0399041 | 95.862 | 290 | 8 | 2 | 1 | 286 | 1 | 290 | 0.0 | 564 |
| Msa0795960 | MtrunA17_Chr4g0056461 | 66.667 | 291 | 76 | 8 | 1 | 286 | 1 | 275 | 9.42e-120 | 344 |
| Msa0795960 | MtrunA17_Chr1g0156521 | 39.614 | 207 | 101 | 7 | 101 | 286 | 198 | 401 | 8.17e-36 | 132 |
| Msa0795960 | MtrunA17_Chr3g0114991 | 37.674 | 215 | 100 | 8 | 101 | 285 | 240 | 450 | 9.42e-33 | 125 |
| Msa0795960 | MtrunA17_Chr4g0042091 | 34.375 | 224 | 94 | 7 | 101 | 285 | 227 | 436 | 9.48e-31 | 119 |
| Msa0795960 | MtrunA17_Chr3g0104431 | 37.963 | 216 | 98 | 7 | 101 | 284 | 176 | 387 | 9.87e-30 | 115 |
| Msa0795960 | MtrunA17_Chr2g0280501 | 31.111 | 225 | 99 | 8 | 101 | 285 | 168 | 376 | 1.85e-21 | 92.8 |
| Msa0795960 | MtrunA17_Chr8g0376191 | 34.118 | 170 | 78 | 8 | 144 | 286 | 4 | 166 | 2.36e-15 | 72.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0795960 | AT1G62520.1 | 55.892 | 297 | 103 | 6 | 1 | 286 | 1 | 280 | 1.77e-96 | 285 |
| Msa0795960 | AT4G22560.1 | 53.425 | 292 | 102 | 9 | 1 | 286 | 1 | 264 | 4.42e-88 | 263 |
| Msa0795960 | AT4G12450.1 | 50.000 | 300 | 113 | 7 | 1 | 286 | 1 | 277 | 6.58e-83 | 251 |
| Msa0795960 | AT4G27240.1 | 40.094 | 212 | 99 | 6 | 101 | 285 | 220 | 430 | 6.49e-31 | 120 |
| Msa0795960 | AT5G54630.1 | 37.156 | 218 | 103 | 6 | 101 | 285 | 255 | 471 | 7.55e-30 | 117 |
| Msa0795960 | AT2G29660.1 | 36.957 | 230 | 91 | 9 | 101 | 284 | 150 | 371 | 2.58e-28 | 112 |
| Msa0795960 | AT1G75710.1 | 32.773 | 238 | 102 | 8 | 101 | 286 | 228 | 459 | 8.26e-28 | 112 |
| Msa0795960 | AT4G27240.2 | 40.000 | 185 | 89 | 5 | 101 | 264 | 220 | 403 | 6.22e-24 | 100 |
Find 98 sgRNAs with CRISPR-Local
Find 214 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CATTGTTTGGGACCCACTTC+TGG | 0.228821 | 5_3:-7973448 | Msa0795960:CDS |
| TGTGCTTCTTGAACGGTTTA+TGG | 0.289550 | 5_3:+7973768 | None:intergenic |
| ACCCAAACCGTTTGCGGGTC+GGG | 0.301222 | 5_3:-7973617 | Msa0795960:CDS |
| GCTTGTGTGGGGTCGTTTCC+AGG | 0.316873 | 5_3:-7973406 | Msa0795960:CDS |
| CTCCTCATGGTTCCTCGACC+CGG | 0.330062 | 5_3:+7973513 | None:intergenic |
| GTAAACATCTTCAAATGCTT+TGG | 0.334000 | 5_3:+7973951 | None:intergenic |
| AGTGATGAGGTTTCATTGTT+TGG | 0.348388 | 5_3:-7973461 | Msa0795960:CDS |
| AACCCGACCCGCAAACGGTT+TGG | 0.361036 | 5_3:+7973615 | None:intergenic |
| AGGGTTTGTGGATTCGTTGT+TGG | 0.361387 | 5_3:-7973254 | Msa0795960:CDS |
| ACCCGACCCGCAAACGGTTT+GGG | 0.370093 | 5_3:+7973616 | None:intergenic |
| TTCGAAGCGGGTAGGGTTTG+TGG | 0.380582 | 5_3:-7973266 | Msa0795960:CDS |
| ATGGTTCCTCGACCCGGGTT+GGG | 0.387318 | 5_3:+7973519 | None:intergenic |
| GATAATCTTTCACACTAGTT+GGG | 0.396532 | 5_3:-7973641 | Msa0795960:CDS |
| TGGGGACCCAAACCGTTTGC+GGG | 0.398572 | 5_3:-7973622 | Msa0795960:CDS |
| TGTTGTTATGGCTGGTGGGT+GGG | 0.398664 | 5_3:-7973995 | None:intergenic |
| GTGATGAGGTTTCATTGTTT+GGG | 0.398926 | 5_3:-7973460 | Msa0795960:CDS |
| CCCTACGGTGGAGCTTGTGT+GGG | 0.404750 | 5_3:-7973418 | Msa0795960:CDS |
| CGTTGTTGGATGGACGAGTT+GGG | 0.407087 | 5_3:-7973240 | Msa0795960:CDS |
| GTTTATGGTAGTTTCAAAAT+CGG | 0.417278 | 5_3:+7973783 | None:intergenic |
| AGATAATCTTTCACACTAGT+TGG | 0.417289 | 5_3:-7973642 | Msa0795960:CDS |
| AAGGGCTATGTTGGTTTGTC+GGG | 0.421378 | 5_3:-7973305 | Msa0795960:CDS |
| ATCTCCACCACATTCCTTGA+AGG | 0.423726 | 5_3:+7973661 | None:intergenic |
| CATGGTTCCTCGACCCGGGT+TGG | 0.429191 | 5_3:+7973518 | None:intergenic |
| CTCATGTGCTCCACCGCTGC+CGG | 0.432603 | 5_3:+7973351 | None:intergenic |
| GAAGGGCTATGTTGGTTTGT+CGG | 0.434234 | 5_3:-7973306 | Msa0795960:CDS |
| GACTCGGTGAGTGGTGATAA+TGG | 0.435923 | 5_3:-7973214 | Msa0795960:CDS |
| GTTTCCAGGTGGGAAAGGTT+CGG | 0.438560 | 5_3:-7973392 | Msa0795960:CDS |
| TTGGGGACCCAAACCGTTTG+CGG | 0.438771 | 5_3:-7973623 | Msa0795960:CDS |
| CGAAATATTATTCCGGTTGG+TGG | 0.441912 | 5_3:+7973738 | None:intergenic |
| TTAATGAAGGTCATCCTTCA+AGG | 0.453362 | 5_3:-7973675 | Msa0795960:CDS |
| GAGAGTTCCGGTGGTGGTAG+AGG | 0.460397 | 5_3:-7973331 | Msa0795960:CDS |
| TTGTCGGGTCATAGCGGGTA+GGG | 0.463168 | 5_3:-7973290 | Msa0795960:CDS |
| GGTGGAGCACATGAGAGTTC+CGG | 0.463301 | 5_3:-7973343 | Msa0795960:CDS |
| TGGTGATAATGGTGAGTTGT+TGG | 0.464789 | 5_3:-7973203 | Msa0795960:CDS |
| TTGTTGTTATGGCTGGTGGG+TGG | 0.471689 | 5_3:-7973996 | None:intergenic |
| ACGGCATCGAAATATTATTC+CGG | 0.472801 | 5_3:+7973731 | None:intergenic |
| TTTGTCGGGTCATAGCGGGT+AGG | 0.473834 | 5_3:-7973291 | Msa0795960:CDS |
| CACACCTTGCATTCTCCTCA+TGG | 0.473982 | 5_3:+7973500 | None:intergenic |
| GACCCAAACCGTTTGCGGGT+CGG | 0.474386 | 5_3:-7973618 | Msa0795960:CDS |
| TCCTCATGGTTCCTCGACCC+GGG | 0.476091 | 5_3:+7973514 | None:intergenic |
| GGTAGGGTTTCGAAGCGGGT+AGG | 0.482433 | 5_3:-7973274 | Msa0795960:CDS |
| AGAGAAGAGAAACGTGGGTC+CGG | 0.483126 | 5_3:+7973706 | None:intergenic |
| TAGAGGAAGAAGGGCTATGT+TGG | 0.483392 | 5_3:-7973314 | Msa0795960:CDS |
| TCCCTACGGTGGAGCTTGTG+TGG | 0.487032 | 5_3:-7973419 | Msa0795960:CDS |
| GGGTCGTTTCCAGGTGGGAA+AGG | 0.487990 | 5_3:-7973397 | Msa0795960:CDS |
| TAATATTTCGATGCCGTCAC+CGG | 0.489394 | 5_3:-7973725 | Msa0795960:CDS |
| GTAGGGTTTCGAAGCGGGTA+GGG | 0.492035 | 5_3:-7973273 | Msa0795960:CDS |
| AGCGGGTAGGGTTTCGAAGC+GGG | 0.501775 | 5_3:-7973278 | Msa0795960:CDS |
| TTGGTTTGTCGGGTCATAGC+GGG | 0.503925 | 5_3:-7973295 | Msa0795960:CDS |
| ATCTCAACCCGACCCGCAAA+CGG | 0.507441 | 5_3:+7973610 | None:intergenic |
| GCACAAACTCAACCACCAAC+CGG | 0.509332 | 5_3:-7973750 | Msa0795960:CDS |
| TTGGGACCCACTTCTGGTGG+TGG | 0.510353 | 5_3:-7973442 | Msa0795960:CDS |
| TCGTTGTTGGATGGACGAGT+TGG | 0.513717 | 5_3:-7973241 | Msa0795960:CDS |
| ACTTCTGGTGGTGGTCCCTA+CGG | 0.521381 | 5_3:-7973433 | Msa0795960:CDS |
| CCCACGTTTCTCTTCTCTCA+CGG | 0.532875 | 5_3:-7973701 | Msa0795960:CDS |
| TGAAAACCCAACCCGGGTCG+AGG | 0.534115 | 5_3:-7973525 | Msa0795960:CDS |
| TTTGTGGATTCGTTGTTGGA+TGG | 0.534647 | 5_3:-7973250 | Msa0795960:CDS |
| GAGAAACGTGGGTCCGGTGA+CGG | 0.545198 | 5_3:+7973712 | None:intergenic |
| CATCGAAATATTATTCCGGT+TGG | 0.548232 | 5_3:+7973735 | None:intergenic |
| TTGAGTTTGTGCTTCTTGAA+CGG | 0.549453 | 5_3:+7973761 | None:intergenic |
| GCCGCCGAACCTTTCCCACC+TGG | 0.550223 | 5_3:+7973388 | None:intergenic |
| GTGTGGGGTCGTTTCCAGGT+GGG | 0.566405 | 5_3:-7973402 | Msa0795960:CDS |
| TCTCTCACGGAGCTTAATGA+AGG | 0.572488 | 5_3:-7973688 | Msa0795960:CDS |
| CCTTCTTCCTCTACCACCAC+CGG | 0.573313 | 5_3:+7973324 | None:intergenic |
| CCCACACAAGCTCCACCGTA+GGG | 0.579037 | 5_3:+7973418 | None:intergenic |
| CCGGTGGTGGTAGAGGAAGA+AGG | 0.582346 | 5_3:-7973324 | Msa0795960:CDS |
| AATGCAAGGTGTGTTGCGGA+TGG | 0.588283 | 5_3:-7973490 | Msa0795960:CDS |
| GCACATGAGAGTTCCGGTGG+TGG | 0.588850 | 5_3:-7973337 | Msa0795960:CDS |
| ATAATCTTTCACACTAGTTG+GGG | 0.589146 | 5_3:-7973640 | Msa0795960:CDS |
| CTATAAATGATAAGAAAACA+AGG | 0.599360 | 5_3:+7973157 | None:intergenic |
| GAAACGGTGAAAACCCAACC+CGG | 0.600453 | 5_3:-7973532 | Msa0795960:CDS |
| CGGTGGTGGTAGAGGAAGAA+GGG | 0.604170 | 5_3:-7973323 | Msa0795960:CDS |
| GTTTGAAGAGTATCGCGAAA+CGG | 0.606536 | 5_3:-7973548 | Msa0795960:CDS |
| ATGGTTCAAGAACGGTGACT+CGG | 0.611808 | 5_3:-7973570 | Msa0795960:CDS |
| TGTGTGGGGTCGTTTCCAGG+TGG | 0.612180 | 5_3:-7973403 | Msa0795960:CDS |
| GTAGGGACCACCACCAGAAG+TGG | 0.616997 | 5_3:+7973435 | None:intergenic |
| CCCCACACAAGCTCCACCGT+AGG | 0.618087 | 5_3:+7973417 | None:intergenic |
| TGTTTGGGACCCACTTCTGG+TGG | 0.623982 | 5_3:-7973445 | Msa0795960:CDS |
| TCTGGTGGTGGTCCCTACGG+TGG | 0.625406 | 5_3:-7973430 | Msa0795960:CDS |
| TCCAGGTGGGAAAGGTTCGG+CGG | 0.625704 | 5_3:-7973389 | Msa0795960:CDS |
| CGGATGGGAATGAAGTGATG+AGG | 0.625916 | 5_3:-7973474 | Msa0795960:CDS |
| GGAGCACATGAGAGTTCCGG+TGG | 0.627301 | 5_3:-7973340 | Msa0795960:CDS |
| TCATCCTTCAAGGAATGTGG+TGG | 0.632490 | 5_3:-7973665 | Msa0795960:CDS |
| AGGTCATCCTTCAAGGAATG+TGG | 0.641561 | 5_3:-7973668 | Msa0795960:CDS |
| ATGCAAGGTGTGTTGCGGAT+GGG | 0.645575 | 5_3:-7973489 | Msa0795960:CDS |
| GGTTCACAATGGTTCAAGAA+CGG | 0.647332 | 5_3:-7973578 | Msa0795960:CDS |
| GTTGGTTTGTCGGGTCATAG+CGG | 0.647807 | 5_3:-7973296 | Msa0795960:CDS |
| GGAACCATGAGGAGAATGCA+AGG | 0.648204 | 5_3:-7973504 | Msa0795960:CDS |
| CCTACGGTGGAGCTTGTGTG+GGG | 0.648346 | 5_3:-7973417 | Msa0795960:CDS |
| AAACGGTGAAAACCCAACCC+GGG | 0.661312 | 5_3:-7973531 | Msa0795960:CDS |
| TAGGGACCACCACCAGAAGT+GGG | 0.662068 | 5_3:+7973436 | None:intergenic |
| GGAGAATGCAAGGTGTGTTG+CGG | 0.683843 | 5_3:-7973494 | Msa0795960:CDS |
| GTTGGGATTGACTCGGTGAG+TGG | 0.684359 | 5_3:-7973223 | Msa0795960:CDS |
| CCGTGAGAGAAGAGAAACGT+GGG | 0.690837 | 5_3:+7973701 | None:intergenic |
| TCCGTGAGAGAAGAGAAACG+TGG | 0.707164 | 5_3:+7973700 | None:intergenic |
| TGGACGAGTTGGGATTGACT+CGG | 0.715365 | 5_3:-7973230 | Msa0795960:CDS |
| TAGCGGGTAGGGTTTCGAAG+CGG | 0.715503 | 5_3:-7973279 | Msa0795960:CDS |
| ACCCGGGTCGAGGAACCATG+AGG | 0.720452 | 5_3:-7973515 | Msa0795960:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | CTATAAATGATAAGAAAACA+AGG | + | chr5_3:7973984-7974003 | None:intergenic | 20.0% |
| !!! | CTTGTTTTCTTATCATTTAT+AGG | - | chr5_3:7973982-7974001 | Msa0795960:CDS | 20.0% |
| !! | CTATAAATGATAAGAAAACA+AGG | + | chr5_3:7973984-7974003 | None:intergenic | 20.0% |
| !!! | CTTGTTTTCTTATCATTTAT+AGG | - | chr5_3:7973982-7974001 | Msa0795960:CDS | 20.0% |
| !!! | GTATTCTGTTTTTTGTGTTT+GGG | + | chr5_3:7973215-7973234 | None:intergenic | 25.0% |
| !!! | TGTATTCTGTTTTTTGTGTT+TGG | + | chr5_3:7973216-7973235 | None:intergenic | 25.0% |
| ! | GTTTATGGTAGTTTCAAAAT+CGG | + | chr5_3:7973358-7973377 | None:intergenic | 25.0% |
| !!! | GTATTCTGTTTTTTGTGTTT+GGG | + | chr5_3:7973215-7973234 | None:intergenic | 25.0% |
| !!! | TGTATTCTGTTTTTTGTGTT+TGG | + | chr5_3:7973216-7973235 | None:intergenic | 25.0% |
| ! | GTTTATGGTAGTTTCAAAAT+CGG | + | chr5_3:7973358-7973377 | None:intergenic | 25.0% |
| GTAAACATCTTCAAATGCTT+TGG | + | chr5_3:7973190-7973209 | None:intergenic | 30.0% | |
| !!! | ATGTTTTTGAAGCGGTTTTT+TGG | + | chr5_3:7973307-7973326 | None:intergenic | 30.0% |
| !! | GAACTATGATGTTTTTGAAG+CGG | + | chr5_3:7973315-7973334 | None:intergenic | 30.0% |
| AGATAATCTTTCACACTAGT+TGG | - | chr5_3:7973496-7973515 | Msa0795960:CDS | 30.0% | |
| GATAATCTTTCACACTAGTT+GGG | - | chr5_3:7973497-7973516 | Msa0795960:CDS | 30.0% | |
| ATAATCTTTCACACTAGTTG+GGG | - | chr5_3:7973498-7973517 | Msa0795960:CDS | 30.0% | |
| !! | ATGATTTTCAAGGTTCACAA+TGG | - | chr5_3:7973549-7973568 | Msa0795960:CDS | 30.0% |
| GTAAACATCTTCAAATGCTT+TGG | + | chr5_3:7973190-7973209 | None:intergenic | 30.0% | |
| !!! | ATGTTTTTGAAGCGGTTTTT+TGG | + | chr5_3:7973307-7973326 | None:intergenic | 30.0% |
| !! | GAACTATGATGTTTTTGAAG+CGG | + | chr5_3:7973315-7973334 | None:intergenic | 30.0% |
| AGATAATCTTTCACACTAGT+TGG | - | chr5_3:7973496-7973515 | Msa0795960:CDS | 30.0% | |
| GATAATCTTTCACACTAGTT+GGG | - | chr5_3:7973497-7973516 | Msa0795960:CDS | 30.0% | |
| ATAATCTTTCACACTAGTTG+GGG | - | chr5_3:7973498-7973517 | Msa0795960:CDS | 30.0% | |
| !! | ATGATTTTCAAGGTTCACAA+TGG | - | chr5_3:7973549-7973568 | Msa0795960:CDS | 30.0% |
| !!! | TGAAGCGGTTTTTTGGATTT+AGG | + | chr5_3:7973300-7973319 | None:intergenic | 35.0% |
| TTGAGTTTGTGCTTCTTGAA+CGG | + | chr5_3:7973380-7973399 | None:intergenic | 35.0% | |
| CATCGAAATATTATTCCGGT+TGG | + | chr5_3:7973406-7973425 | None:intergenic | 35.0% | |
| ! | ACGGCATCGAAATATTATTC+CGG | + | chr5_3:7973410-7973429 | None:intergenic | 35.0% |
| TTAATGAAGGTCATCCTTCA+AGG | - | chr5_3:7973463-7973482 | Msa0795960:CDS | 35.0% | |
| AGTGATGAGGTTTCATTGTT+TGG | - | chr5_3:7973677-7973696 | Msa0795960:CDS | 35.0% | |
| GTGATGAGGTTTCATTGTTT+GGG | - | chr5_3:7973678-7973697 | Msa0795960:CDS | 35.0% | |
| !!! | TGAAGCGGTTTTTTGGATTT+AGG | + | chr5_3:7973300-7973319 | None:intergenic | 35.0% |
| TTGAGTTTGTGCTTCTTGAA+CGG | + | chr5_3:7973380-7973399 | None:intergenic | 35.0% | |
| CATCGAAATATTATTCCGGT+TGG | + | chr5_3:7973406-7973425 | None:intergenic | 35.0% | |
| ! | ACGGCATCGAAATATTATTC+CGG | + | chr5_3:7973410-7973429 | None:intergenic | 35.0% |
| TTAATGAAGGTCATCCTTCA+AGG | - | chr5_3:7973463-7973482 | Msa0795960:CDS | 35.0% | |
| AGTGATGAGGTTTCATTGTT+TGG | - | chr5_3:7973677-7973696 | Msa0795960:CDS | 35.0% | |
| GTGATGAGGTTTCATTGTTT+GGG | - | chr5_3:7973678-7973697 | Msa0795960:CDS | 35.0% | |
| TGTGCTTCTTGAACGGTTTA+TGG | + | chr5_3:7973373-7973392 | None:intergenic | 40.0% | |
| CGAAATATTATTCCGGTTGG+TGG | + | chr5_3:7973403-7973422 | None:intergenic | 40.0% | |
| TAATATTTCGATGCCGTCAC+CGG | - | chr5_3:7973413-7973432 | Msa0795960:CDS | 40.0% | |
| !!! | TCGGGTTGAGATGATTTTCA+AGG | - | chr5_3:7973539-7973558 | Msa0795960:CDS | 40.0% |
| GGTTCACAATGGTTCAAGAA+CGG | - | chr5_3:7973560-7973579 | Msa0795960:CDS | 40.0% | |
| !! | GTTTGAAGAGTATCGCGAAA+CGG | - | chr5_3:7973590-7973609 | Msa0795960:CDS | 40.0% |
| TTTGTGGATTCGTTGTTGGA+TGG | - | chr5_3:7973888-7973907 | Msa0795960:CDS | 40.0% | |
| !! | TGGTGATAATGGTGAGTTGT+TGG | - | chr5_3:7973935-7973954 | Msa0795960:CDS | 40.0% |
| TGTGCTTCTTGAACGGTTTA+TGG | + | chr5_3:7973373-7973392 | None:intergenic | 40.0% | |
| CGAAATATTATTCCGGTTGG+TGG | + | chr5_3:7973403-7973422 | None:intergenic | 40.0% | |
| TAATATTTCGATGCCGTCAC+CGG | - | chr5_3:7973413-7973432 | Msa0795960:CDS | 40.0% | |
| !!! | TCGGGTTGAGATGATTTTCA+AGG | - | chr5_3:7973539-7973558 | Msa0795960:CDS | 40.0% |
| GGTTCACAATGGTTCAAGAA+CGG | - | chr5_3:7973560-7973579 | Msa0795960:CDS | 40.0% | |
| !! | GTTTGAAGAGTATCGCGAAA+CGG | - | chr5_3:7973590-7973609 | Msa0795960:CDS | 40.0% |
| TTTGTGGATTCGTTGTTGGA+TGG | - | chr5_3:7973888-7973907 | Msa0795960:CDS | 40.0% | |
| !! | TGGTGATAATGGTGAGTTGT+TGG | - | chr5_3:7973935-7973954 | Msa0795960:CDS | 40.0% |
| TCTCTCACGGAGCTTAATGA+AGG | - | chr5_3:7973450-7973469 | Msa0795960:CDS | 45.0% | |
| AGGTCATCCTTCAAGGAATG+TGG | - | chr5_3:7973470-7973489 | Msa0795960:CDS | 45.0% | |
| TCATCCTTCAAGGAATGTGG+TGG | - | chr5_3:7973473-7973492 | Msa0795960:CDS | 45.0% | |
| ATCTCCACCACATTCCTTGA+AGG | + | chr5_3:7973480-7973499 | None:intergenic | 45.0% | |
| ATGGTTCAAGAACGGTGACT+CGG | - | chr5_3:7973568-7973587 | Msa0795960:CDS | 45.0% | |
| TAGAGGAAGAAGGGCTATGT+TGG | - | chr5_3:7973824-7973843 | Msa0795960:CDS | 45.0% | |
| !! | GAAGGGCTATGTTGGTTTGT+CGG | - | chr5_3:7973832-7973851 | Msa0795960:CDS | 45.0% |
| !! | AAGGGCTATGTTGGTTTGTC+GGG | - | chr5_3:7973833-7973852 | Msa0795960:CDS | 45.0% |
| AGGGTTTGTGGATTCGTTGT+TGG | - | chr5_3:7973884-7973903 | Msa0795960:CDS | 45.0% | |
| TCTCTCACGGAGCTTAATGA+AGG | - | chr5_3:7973450-7973469 | Msa0795960:CDS | 45.0% | |
| AGGTCATCCTTCAAGGAATG+TGG | - | chr5_3:7973470-7973489 | Msa0795960:CDS | 45.0% | |
| TCATCCTTCAAGGAATGTGG+TGG | - | chr5_3:7973473-7973492 | Msa0795960:CDS | 45.0% | |
| ATCTCCACCACATTCCTTGA+AGG | + | chr5_3:7973480-7973499 | None:intergenic | 45.0% | |
| ATGGTTCAAGAACGGTGACT+CGG | - | chr5_3:7973568-7973587 | Msa0795960:CDS | 45.0% | |
| TAGAGGAAGAAGGGCTATGT+TGG | - | chr5_3:7973824-7973843 | Msa0795960:CDS | 45.0% | |
| !! | GAAGGGCTATGTTGGTTTGT+CGG | - | chr5_3:7973832-7973851 | Msa0795960:CDS | 45.0% |
| !! | AAGGGCTATGTTGGTTTGTC+GGG | - | chr5_3:7973833-7973852 | Msa0795960:CDS | 45.0% |
| AGGGTTTGTGGATTCGTTGT+TGG | - | chr5_3:7973884-7973903 | Msa0795960:CDS | 45.0% | |
| GCACAAACTCAACCACCAAC+CGG | - | chr5_3:7973388-7973407 | Msa0795960:CDS | 50.0% | |
| AGAGAAGAGAAACGTGGGTC+CGG | + | chr5_3:7973435-7973454 | None:intergenic | 50.0% | |
| CCGTGAGAGAAGAGAAACGT+GGG | + | chr5_3:7973440-7973459 | None:intergenic | 50.0% | |
| CCCACGTTTCTCTTCTCTCA+CGG | - | chr5_3:7973437-7973456 | Msa0795960:CDS | 50.0% | |
| TCCGTGAGAGAAGAGAAACG+TGG | + | chr5_3:7973441-7973460 | None:intergenic | 50.0% | |
| GAAACGGTGAAAACCCAACC+CGG | - | chr5_3:7973606-7973625 | Msa0795960:CDS | 50.0% | |
| AAACGGTGAAAACCCAACCC+GGG | - | chr5_3:7973607-7973626 | Msa0795960:CDS | 50.0% | |
| GGAACCATGAGGAGAATGCA+AGG | - | chr5_3:7973634-7973653 | Msa0795960:CDS | 50.0% | |
| CACACCTTGCATTCTCCTCA+TGG | + | chr5_3:7973641-7973660 | None:intergenic | 50.0% | |
| GGAGAATGCAAGGTGTGTTG+CGG | - | chr5_3:7973644-7973663 | Msa0795960:CDS | 50.0% | |
| AATGCAAGGTGTGTTGCGGA+TGG | - | chr5_3:7973648-7973667 | Msa0795960:CDS | 50.0% | |
| ATGCAAGGTGTGTTGCGGAT+GGG | - | chr5_3:7973649-7973668 | Msa0795960:CDS | 50.0% | |
| CGGATGGGAATGAAGTGATG+AGG | - | chr5_3:7973664-7973683 | Msa0795960:CDS | 50.0% | |
| ! | CATTGTTTGGGACCCACTTC+TGG | - | chr5_3:7973690-7973709 | Msa0795960:CDS | 50.0% |
| GTTTCCAGGTGGGAAAGGTT+CGG | - | chr5_3:7973746-7973765 | Msa0795960:CDS | 50.0% | |
| ! | ATCTGCACATTTTCCGGCAG+CGG | - | chr5_3:7973774-7973793 | Msa0795960:CDS | 50.0% |
| !! | GTTGGTTTGTCGGGTCATAG+CGG | - | chr5_3:7973842-7973861 | Msa0795960:CDS | 50.0% |
| !! | TTGGTTTGTCGGGTCATAGC+GGG | - | chr5_3:7973843-7973862 | Msa0795960:CDS | 50.0% |
| TCGTTGTTGGATGGACGAGT+TGG | - | chr5_3:7973897-7973916 | Msa0795960:CDS | 50.0% | |
| CGTTGTTGGATGGACGAGTT+GGG | - | chr5_3:7973898-7973917 | Msa0795960:CDS | 50.0% | |
| ! | TGGACGAGTTGGGATTGACT+CGG | - | chr5_3:7973908-7973927 | Msa0795960:CDS | 50.0% |
| !! | GACTCGGTGAGTGGTGATAA+TGG | - | chr5_3:7973924-7973943 | Msa0795960:CDS | 50.0% |
| GCACAAACTCAACCACCAAC+CGG | - | chr5_3:7973388-7973407 | Msa0795960:CDS | 50.0% | |
| AGAGAAGAGAAACGTGGGTC+CGG | + | chr5_3:7973435-7973454 | None:intergenic | 50.0% | |
| CCGTGAGAGAAGAGAAACGT+GGG | + | chr5_3:7973440-7973459 | None:intergenic | 50.0% | |
| CCCACGTTTCTCTTCTCTCA+CGG | - | chr5_3:7973437-7973456 | Msa0795960:CDS | 50.0% | |
| TCCGTGAGAGAAGAGAAACG+TGG | + | chr5_3:7973441-7973460 | None:intergenic | 50.0% | |
| GAAACGGTGAAAACCCAACC+CGG | - | chr5_3:7973606-7973625 | Msa0795960:CDS | 50.0% | |
| AAACGGTGAAAACCCAACCC+GGG | - | chr5_3:7973607-7973626 | Msa0795960:CDS | 50.0% | |
| GGAACCATGAGGAGAATGCA+AGG | - | chr5_3:7973634-7973653 | Msa0795960:CDS | 50.0% | |
| CACACCTTGCATTCTCCTCA+TGG | + | chr5_3:7973641-7973660 | None:intergenic | 50.0% | |
| GGAGAATGCAAGGTGTGTTG+CGG | - | chr5_3:7973644-7973663 | Msa0795960:CDS | 50.0% | |
| AATGCAAGGTGTGTTGCGGA+TGG | - | chr5_3:7973648-7973667 | Msa0795960:CDS | 50.0% | |
| ATGCAAGGTGTGTTGCGGAT+GGG | - | chr5_3:7973649-7973668 | Msa0795960:CDS | 50.0% | |
| CGGATGGGAATGAAGTGATG+AGG | - | chr5_3:7973664-7973683 | Msa0795960:CDS | 50.0% | |
| ! | CATTGTTTGGGACCCACTTC+TGG | - | chr5_3:7973690-7973709 | Msa0795960:CDS | 50.0% |
| GTTTCCAGGTGGGAAAGGTT+CGG | - | chr5_3:7973746-7973765 | Msa0795960:CDS | 50.0% | |
| ! | ATCTGCACATTTTCCGGCAG+CGG | - | chr5_3:7973774-7973793 | Msa0795960:CDS | 50.0% |
| !! | GTTGGTTTGTCGGGTCATAG+CGG | - | chr5_3:7973842-7973861 | Msa0795960:CDS | 50.0% |
| !! | TTGGTTTGTCGGGTCATAGC+GGG | - | chr5_3:7973843-7973862 | Msa0795960:CDS | 50.0% |
| TCGTTGTTGGATGGACGAGT+TGG | - | chr5_3:7973897-7973916 | Msa0795960:CDS | 50.0% | |
| CGTTGTTGGATGGACGAGTT+GGG | - | chr5_3:7973898-7973917 | Msa0795960:CDS | 50.0% | |
| ! | TGGACGAGTTGGGATTGACT+CGG | - | chr5_3:7973908-7973927 | Msa0795960:CDS | 50.0% |
| !! | GACTCGGTGAGTGGTGATAA+TGG | - | chr5_3:7973924-7973943 | Msa0795960:CDS | 50.0% |
| TTGGGGACCCAAACCGTTTG+CGG | - | chr5_3:7973515-7973534 | Msa0795960:CDS | 55.0% | |
| ATCTCAACCCGACCCGCAAA+CGG | + | chr5_3:7973531-7973550 | None:intergenic | 55.0% | |
| ! | TGTTTGGGACCCACTTCTGG+TGG | - | chr5_3:7973693-7973712 | Msa0795960:CDS | 55.0% |
| TAGGGACCACCACCAGAAGT+GGG | + | chr5_3:7973705-7973724 | None:intergenic | 55.0% | |
| !! | ACTTCTGGTGGTGGTCCCTA+CGG | - | chr5_3:7973705-7973724 | Msa0795960:CDS | 55.0% |
| ! | GCGGCGATCTGCACATTTTC+CGG | - | chr5_3:7973768-7973787 | Msa0795960:CDS | 55.0% |
| GGTGGAGCACATGAGAGTTC+CGG | - | chr5_3:7973795-7973814 | Msa0795960:CDS | 55.0% | |
| CCTTCTTCCTCTACCACCAC+CGG | + | chr5_3:7973817-7973836 | None:intergenic | 55.0% | |
| ! | CGGTGGTGGTAGAGGAAGAA+GGG | - | chr5_3:7973815-7973834 | Msa0795960:CDS | 55.0% |
| !! | TTTGTCGGGTCATAGCGGGT+AGG | - | chr5_3:7973847-7973866 | Msa0795960:CDS | 55.0% |
| !! | TTGTCGGGTCATAGCGGGTA+GGG | - | chr5_3:7973848-7973867 | Msa0795960:CDS | 55.0% |
| ! | TAGCGGGTAGGGTTTCGAAG+CGG | - | chr5_3:7973859-7973878 | Msa0795960:CDS | 55.0% |
| GTAGGGTTTCGAAGCGGGTA+GGG | - | chr5_3:7973865-7973884 | Msa0795960:CDS | 55.0% | |
| TTCGAAGCGGGTAGGGTTTG+TGG | - | chr5_3:7973872-7973891 | Msa0795960:CDS | 55.0% | |
| !! | GTTGGGATTGACTCGGTGAG+TGG | - | chr5_3:7973915-7973934 | Msa0795960:CDS | 55.0% |
| TTGGGGACCCAAACCGTTTG+CGG | - | chr5_3:7973515-7973534 | Msa0795960:CDS | 55.0% | |
| ATCTCAACCCGACCCGCAAA+CGG | + | chr5_3:7973531-7973550 | None:intergenic | 55.0% | |
| ! | TGTTTGGGACCCACTTCTGG+TGG | - | chr5_3:7973693-7973712 | Msa0795960:CDS | 55.0% |
| TAGGGACCACCACCAGAAGT+GGG | + | chr5_3:7973705-7973724 | None:intergenic | 55.0% | |
| !! | ACTTCTGGTGGTGGTCCCTA+CGG | - | chr5_3:7973705-7973724 | Msa0795960:CDS | 55.0% |
| ! | GCGGCGATCTGCACATTTTC+CGG | - | chr5_3:7973768-7973787 | Msa0795960:CDS | 55.0% |
| GGTGGAGCACATGAGAGTTC+CGG | - | chr5_3:7973795-7973814 | Msa0795960:CDS | 55.0% | |
| CCTTCTTCCTCTACCACCAC+CGG | + | chr5_3:7973817-7973836 | None:intergenic | 55.0% | |
| ! | CGGTGGTGGTAGAGGAAGAA+GGG | - | chr5_3:7973815-7973834 | Msa0795960:CDS | 55.0% |
| !! | TTTGTCGGGTCATAGCGGGT+AGG | - | chr5_3:7973847-7973866 | Msa0795960:CDS | 55.0% |
| !! | TTGTCGGGTCATAGCGGGTA+GGG | - | chr5_3:7973848-7973867 | Msa0795960:CDS | 55.0% |
| ! | TAGCGGGTAGGGTTTCGAAG+CGG | - | chr5_3:7973859-7973878 | Msa0795960:CDS | 55.0% |
| GTAGGGTTTCGAAGCGGGTA+GGG | - | chr5_3:7973865-7973884 | Msa0795960:CDS | 55.0% | |
| TTCGAAGCGGGTAGGGTTTG+TGG | - | chr5_3:7973872-7973891 | Msa0795960:CDS | 55.0% | |
| !! | GTTGGGATTGACTCGGTGAG+TGG | - | chr5_3:7973915-7973934 | Msa0795960:CDS | 55.0% |
| GAGAAACGTGGGTCCGGTGA+CGG | + | chr5_3:7973429-7973448 | None:intergenic | 60.0% | |
| TGGGGACCCAAACCGTTTGC+GGG | - | chr5_3:7973516-7973535 | Msa0795960:CDS | 60.0% | |
| GACCCAAACCGTTTGCGGGT+CGG | - | chr5_3:7973520-7973539 | Msa0795960:CDS | 60.0% | |
| ACCCAAACCGTTTGCGGGTC+GGG | - | chr5_3:7973521-7973540 | Msa0795960:CDS | 60.0% | |
| ACCCGACCCGCAAACGGTTT+GGG | + | chr5_3:7973525-7973544 | None:intergenic | 60.0% | |
| AACCCGACCCGCAAACGGTT+TGG | + | chr5_3:7973526-7973545 | None:intergenic | 60.0% | |
| TGAAAACCCAACCCGGGTCG+AGG | - | chr5_3:7973613-7973632 | Msa0795960:CDS | 60.0% | |
| ATGGTTCCTCGACCCGGGTT+GGG | + | chr5_3:7973622-7973641 | None:intergenic | 60.0% | |
| TCCTCATGGTTCCTCGACCC+GGG | + | chr5_3:7973627-7973646 | None:intergenic | 60.0% | |
| CTCCTCATGGTTCCTCGACC+CGG | + | chr5_3:7973628-7973647 | None:intergenic | 60.0% | |
| TTGGGACCCACTTCTGGTGG+TGG | - | chr5_3:7973696-7973715 | Msa0795960:CDS | 60.0% | |
| GTAGGGACCACCACCAGAAG+TGG | + | chr5_3:7973706-7973725 | None:intergenic | 60.0% | |
| TCCCTACGGTGGAGCTTGTG+TGG | - | chr5_3:7973719-7973738 | Msa0795960:CDS | 60.0% | |
| CCCACACAAGCTCCACCGTA+GGG | + | chr5_3:7973723-7973742 | None:intergenic | 60.0% | |
| CCCTACGGTGGAGCTTGTGT+GGG | - | chr5_3:7973720-7973739 | Msa0795960:CDS | 60.0% | |
| CCTACGGTGGAGCTTGTGTG+GGG | - | chr5_3:7973721-7973740 | Msa0795960:CDS | 60.0% | |
| GCTTGTGTGGGGTCGTTTCC+AGG | - | chr5_3:7973732-7973751 | Msa0795960:CDS | 60.0% | |
| TGTGTGGGGTCGTTTCCAGG+TGG | - | chr5_3:7973735-7973754 | Msa0795960:CDS | 60.0% | |
| GTGTGGGGTCGTTTCCAGGT+GGG | - | chr5_3:7973736-7973755 | Msa0795960:CDS | 60.0% | |
| GGGTCGTTTCCAGGTGGGAA+AGG | - | chr5_3:7973741-7973760 | Msa0795960:CDS | 60.0% | |
| TCCAGGTGGGAAAGGTTCGG+CGG | - | chr5_3:7973749-7973768 | Msa0795960:CDS | 60.0% | |
| ! | TGCACATTTTCCGGCAGCGG+TGG | - | chr5_3:7973777-7973796 | Msa0795960:CDS | 60.0% |
| GGAGCACATGAGAGTTCCGG+TGG | - | chr5_3:7973798-7973817 | Msa0795960:CDS | 60.0% | |
| GCACATGAGAGTTCCGGTGG+TGG | - | chr5_3:7973801-7973820 | Msa0795960:CDS | 60.0% | |
| ! | GAGAGTTCCGGTGGTGGTAG+AGG | - | chr5_3:7973807-7973826 | Msa0795960:CDS | 60.0% |
| ! | CCGGTGGTGGTAGAGGAAGA+AGG | - | chr5_3:7973814-7973833 | Msa0795960:CDS | 60.0% |
| AGCGGGTAGGGTTTCGAAGC+GGG | - | chr5_3:7973860-7973879 | Msa0795960:CDS | 60.0% | |
| GGTAGGGTTTCGAAGCGGGT+AGG | - | chr5_3:7973864-7973883 | Msa0795960:CDS | 60.0% | |
| GAGAAACGTGGGTCCGGTGA+CGG | + | chr5_3:7973429-7973448 | None:intergenic | 60.0% | |
| TGGGGACCCAAACCGTTTGC+GGG | - | chr5_3:7973516-7973535 | Msa0795960:CDS | 60.0% | |
| GACCCAAACCGTTTGCGGGT+CGG | - | chr5_3:7973520-7973539 | Msa0795960:CDS | 60.0% | |
| ACCCAAACCGTTTGCGGGTC+GGG | - | chr5_3:7973521-7973540 | Msa0795960:CDS | 60.0% | |
| ACCCGACCCGCAAACGGTTT+GGG | + | chr5_3:7973525-7973544 | None:intergenic | 60.0% | |
| AACCCGACCCGCAAACGGTT+TGG | + | chr5_3:7973526-7973545 | None:intergenic | 60.0% | |
| TGAAAACCCAACCCGGGTCG+AGG | - | chr5_3:7973613-7973632 | Msa0795960:CDS | 60.0% | |
| ATGGTTCCTCGACCCGGGTT+GGG | + | chr5_3:7973622-7973641 | None:intergenic | 60.0% | |
| TCCTCATGGTTCCTCGACCC+GGG | + | chr5_3:7973627-7973646 | None:intergenic | 60.0% | |
| CTCCTCATGGTTCCTCGACC+CGG | + | chr5_3:7973628-7973647 | None:intergenic | 60.0% | |
| TTGGGACCCACTTCTGGTGG+TGG | - | chr5_3:7973696-7973715 | Msa0795960:CDS | 60.0% | |
| GTAGGGACCACCACCAGAAG+TGG | + | chr5_3:7973706-7973725 | None:intergenic | 60.0% | |
| TCCCTACGGTGGAGCTTGTG+TGG | - | chr5_3:7973719-7973738 | Msa0795960:CDS | 60.0% | |
| CCCACACAAGCTCCACCGTA+GGG | + | chr5_3:7973723-7973742 | None:intergenic | 60.0% | |
| CCCTACGGTGGAGCTTGTGT+GGG | - | chr5_3:7973720-7973739 | Msa0795960:CDS | 60.0% | |
| CCTACGGTGGAGCTTGTGTG+GGG | - | chr5_3:7973721-7973740 | Msa0795960:CDS | 60.0% | |
| GCTTGTGTGGGGTCGTTTCC+AGG | - | chr5_3:7973732-7973751 | Msa0795960:CDS | 60.0% | |
| TGTGTGGGGTCGTTTCCAGG+TGG | - | chr5_3:7973735-7973754 | Msa0795960:CDS | 60.0% | |
| GTGTGGGGTCGTTTCCAGGT+GGG | - | chr5_3:7973736-7973755 | Msa0795960:CDS | 60.0% | |
| GGGTCGTTTCCAGGTGGGAA+AGG | - | chr5_3:7973741-7973760 | Msa0795960:CDS | 60.0% | |
| TCCAGGTGGGAAAGGTTCGG+CGG | - | chr5_3:7973749-7973768 | Msa0795960:CDS | 60.0% | |
| ! | TGCACATTTTCCGGCAGCGG+TGG | - | chr5_3:7973777-7973796 | Msa0795960:CDS | 60.0% |
| GGAGCACATGAGAGTTCCGG+TGG | - | chr5_3:7973798-7973817 | Msa0795960:CDS | 60.0% | |
| GCACATGAGAGTTCCGGTGG+TGG | - | chr5_3:7973801-7973820 | Msa0795960:CDS | 60.0% | |
| ! | GAGAGTTCCGGTGGTGGTAG+AGG | - | chr5_3:7973807-7973826 | Msa0795960:CDS | 60.0% |
| ! | CCGGTGGTGGTAGAGGAAGA+AGG | - | chr5_3:7973814-7973833 | Msa0795960:CDS | 60.0% |
| AGCGGGTAGGGTTTCGAAGC+GGG | - | chr5_3:7973860-7973879 | Msa0795960:CDS | 60.0% | |
| GGTAGGGTTTCGAAGCGGGT+AGG | - | chr5_3:7973864-7973883 | Msa0795960:CDS | 60.0% | |
| CATGGTTCCTCGACCCGGGT+TGG | + | chr5_3:7973623-7973642 | None:intergenic | 65.0% | |
| ACCCGGGTCGAGGAACCATG+AGG | - | chr5_3:7973623-7973642 | Msa0795960:CDS | 65.0% | |
| !! | TCTGGTGGTGGTCCCTACGG+TGG | - | chr5_3:7973708-7973727 | Msa0795960:CDS | 65.0% |
| CCCCACACAAGCTCCACCGT+AGG | + | chr5_3:7973724-7973743 | None:intergenic | 65.0% | |
| CTCATGTGCTCCACCGCTGC+CGG | + | chr5_3:7973790-7973809 | None:intergenic | 65.0% | |
| CATGGTTCCTCGACCCGGGT+TGG | + | chr5_3:7973623-7973642 | None:intergenic | 65.0% | |
| ACCCGGGTCGAGGAACCATG+AGG | - | chr5_3:7973623-7973642 | Msa0795960:CDS | 65.0% | |
| !! | TCTGGTGGTGGTCCCTACGG+TGG | - | chr5_3:7973708-7973727 | Msa0795960:CDS | 65.0% |
| CCCCACACAAGCTCCACCGT+AGG | + | chr5_3:7973724-7973743 | None:intergenic | 65.0% | |
| CTCATGTGCTCCACCGCTGC+CGG | + | chr5_3:7973790-7973809 | None:intergenic | 65.0% | |
| GCCGCCGAACCTTTCCCACC+TGG | + | chr5_3:7973753-7973772 | None:intergenic | 70.0% | |
| GCCGCCGAACCTTTCCCACC+TGG | + | chr5_3:7973753-7973772 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_3 | gene | 7973150 | 7974010 | 7973150 | ID=Msa0795960;Name=Msa0795960 |
| chr5_3 | mRNA | 7973150 | 7974010 | 7973150 | ID=Msa0795960-mRNA-1;Parent=Msa0795960;Name=Msa0795960-mRNA-1;_AED=0.00;_eAED=0.00;_QI=0|-1|0|1|-1|1|1|0|286 |
| chr5_3 | exon | 7973150 | 7974010 | 7973150 | ID=Msa0795960-mRNA-1:exon:3289;Parent=Msa0795960-mRNA-1 |
| chr5_3 | CDS | 7973150 | 7974010 | 7973150 | ID=Msa0795960-mRNA-1:cds;Parent=Msa0795960-mRNA-1 |
| Gene Sequence |
| Protein sequence |
