AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0741900


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0741900 MtrunA17_Chr5g0443341 98.513 538 8 0 1 538 1 538 0.0 1089
Msa0741900 MtrunA17_Chr3g0096481 70.280 535 147 4 1 531 1 527 0.0 756
Msa0741900 MtrunA17_Chr4g0005991 51.731 491 221 7 51 531 7 491 6.41e-167 482
Msa0741900 MtrunA17_Chr1g0170421 48.491 497 239 5 50 534 40 531 7.34e-166 483
Msa0741900 MtrunA17_Chr7g0241831 51.148 479 219 7 60 529 19 491 4.59e-159 462
Msa0741900 MtrunA17_Chr5g0425071 49.684 475 220 8 64 528 15 480 4.81e-159 462
Msa0741900 MtrunA17_Chr1g0194391 49.897 485 223 11 54 529 56 529 5.58e-157 459
Msa0741900 MtrunA17_Chr8g0348781 45.669 508 257 8 44 537 3 505 8.98e-152 444
Msa0741900 MtrunA17_Chr3g0096591 74.908 271 66 2 261 529 1 271 6.49e-146 420
Msa0741900 MtrunA17_Chr5g0435581 45.094 479 249 6 65 533 2 476 5.35e-141 416
Msa0741900 MtrunA17_Chr3g0096581 58.871 248 102 0 2 249 1 248 5.90e-101 305
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0741900 AT1G06520.1 57.850 586 190 11 1 530 1 585 0.0 645
Msa0741900 AT2G38110.1 49.287 491 231 8 51 529 10 494 8.27e-157 457
Msa0741900 AT1G02390.1 47.047 508 245 10 41 531 29 529 2.18e-149 439
Msa0741900 AT4G01950.1 46.838 506 247 13 39 531 23 519 2.65e-149 439
Msa0741900 AT4G01950.2 46.838 506 247 13 39 531 51 547 2.74e-148 437
Msa0741900 AT1G01610.1 45.545 505 256 10 44 536 3 500 9.28e-144 424
Msa0741900 AT4G00400.1 45.149 505 259 8 44 537 3 500 1.67e-141 418
Msa0741900 AT3G11430.1 46.311 488 246 8 61 537 7 489 1.57e-139 413
Msa0741900 AT5G06090.1 45.248 484 253 7 64 538 8 488 2.18e-136 405
Msa0741900 AT3G11325.2 43.542 271 113 3 267 533 142 376 3.48e-70 230
Msa0741900 AT3G11325.2 36.190 105 63 1 75 175 9 113 1.15e-13 73.2
Msa0741900 AT3G11325.1 43.542 271 113 3 267 533 139 373 3.84e-70 230
Msa0741900 AT3G11325.1 36.190 105 63 1 75 175 6 110 1.24e-13 73.2

Find 96 sgRNAs with CRISPR-Local

Find 276 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AGTTATCATATTCAAATTAT+TGG 0.142400 5_1:-61669518 Msa0741900:CDS
CTATATGTTACTGCAGTTAA+AGG 0.179926 5_1:+61669836 None:intergenic
AACAAGACCACAAATTAATT+TGG 0.182704 5_1:+61669226 None:intergenic
CTTCCATCATGAAATATTAA+TGG 0.211384 5_1:+61670121 None:intergenic
AGAGCACTTAAAGAGTATTT+TGG 0.236160 5_1:-61670623 Msa0741900:CDS
CCAGCACATGTAAGTTCTTT+AGG 0.256974 5_1:+61669488 None:intergenic
GGTGATAGAAAACCTGATAT+TGG 0.266071 5_1:-61670602 Msa0741900:CDS
TATGAGGTTCTTGCTTCAAC+TGG 0.280870 5_1:-61670800 Msa0741900:CDS
TGTTTCCAATGGTTCTTCTA+AGG 0.284116 5_1:-61671255 Msa0741900:CDS
TCTTCTAAGGCTTGTAGATT+TGG 0.285720 5_1:-61671242 Msa0741900:CDS
TCTCTACATGTTGTTCCTTC+AGG 0.287385 5_1:+61669695 None:intergenic
GCAATTTATAGAATCCTTCT+TGG 0.289025 5_1:-61670028 Msa0741900:CDS
AAACAATTGGGTGATGCTTT+GGG 0.291614 5_1:-61669428 Msa0741900:CDS
TACAAATTAGCACTTGAATT+AGG 0.294114 5_1:-61669992 Msa0741900:CDS
GAAACAATTGGGTGATGCTT+TGG 0.315610 5_1:-61669429 Msa0741900:CDS
GTTATCATATTCAAATTATT+GGG 0.317084 5_1:-61669517 Msa0741900:CDS
GTGGTCTTGTTTGTTCTTGT+TGG 0.324449 5_1:-61669214 Msa0741900:three_prime_UTR
TCATGAAATATTAATGGCTT+TGG 0.325007 5_1:+61670127 None:intergenic
TCCCTTGGCATGATTGAGTT+TGG 0.327913 5_1:+61670157 None:intergenic
AAAATGAATGAGACCTTAAT+AGG 0.327978 5_1:+61671038 None:intergenic
GAACTAAACCTTAACAAATA+TGG 0.328528 5_1:+61669671 None:intergenic
ACAAACAAAACACCTTTGTT+TGG 0.332605 5_1:+61669914 None:intergenic
GAAGTTCCAATTCCAATATC+AGG 0.337684 5_1:+61670590 None:intergenic
AGAAAACCTGATATTGGAAT+TGG 0.340801 5_1:-61670596 Msa0741900:CDS
AAAGCAACAAGCATGAAATA+AGG 0.355417 5_1:+61671013 None:intergenic
TAGCACTTGAATTAGGAGTT+TGG 0.358699 5_1:-61669985 Msa0741900:CDS
ACATTCATAGAGTCCTATTA+AGG 0.361276 5_1:-61671051 Msa0741900:CDS
GGCTTTGGATATTTGTCCCT+TGG 0.362641 5_1:+61670142 None:intergenic
AATTCAAGTGCTAATTTGTA+AGG 0.369177 5_1:+61669995 None:intergenic
GATAAGTATATGATGCTTGC+AGG 0.371641 5_1:-61669377 Msa0741900:CDS
GGCACAGAGTTACACACATT+TGG 0.377564 5_1:-61670695 Msa0741900:CDS
TAGTTCATTGTTTGCTGAGT+TGG 0.382543 5_1:-61669654 Msa0741900:CDS
ATTGAATCGGATGATTTAAT+CGG 0.391075 5_1:-61669084 Msa0741900:three_prime_UTR
TAATTATATACAGAAACAAT+TGG 0.393290 5_1:-61669441 Msa0741900:CDS
GTAGAGAACCATATTTGTTA+AGG 0.401265 5_1:-61669679 Msa0741900:CDS
AGCAAGCGGATTGAAGTGTT+TGG 0.402620 5_1:-61669573 Msa0741900:CDS
TGAATATGATAACTTGGCTT+AGG 0.405031 5_1:+61669527 None:intergenic
CTTTATTCTTAAACCACAAA+AGG 0.407515 5_1:+61670889 None:intergenic
TCTTAATCCTCAAGTTTATG+AGG 0.426090 5_1:-61670816 Msa0741900:CDS
CACAAGTGTGCCTAGAGTTA+TGG 0.426617 5_1:-61670762 Msa0741900:CDS
AGTATGAATTTGCAAGTAGT+TGG 0.435053 5_1:+61671212 None:intergenic
AATGACGTGCTTAAGAAAAC+AGG 0.451740 5_1:+61669866 None:intergenic
AGATTCTCTAAATAAAACTT+TGG 0.454948 5_1:+61670836 None:intergenic
GTGCCTAGAGTTATGGTAGA+AGG 0.456952 5_1:-61670755 Msa0741900:CDS
ATTGCTAAAATAATTCCAAT+TGG 0.461462 5_1:+61670046 None:intergenic
ACATTTGGTTGCTACTTCAC+TGG 0.463035 5_1:-61670680 Msa0741900:CDS
ATAATTTGAATATGATAACT+TGG 0.464884 5_1:+61669521 None:intergenic
ATGATGCTTGCAGGGAATGA+AGG 0.469185 5_1:-61669368 Msa0741900:CDS
CCTAAAGAACTTACATGTGC+TGG 0.479006 5_1:-61669488 Msa0741900:CDS
ATGCACACATAGGACATTGT+TGG 0.480393 5_1:-61669891 Msa0741900:CDS
TAAACATTCATGTGAGGGCT+AGG 0.484017 5_1:+61669118 None:intergenic
ATGTTCATGTGGCTACCAAT+TGG 0.484031 5_1:-61670061 Msa0741900:CDS
TTGGTTTCCAAATTAATTTG+TGG 0.500198 5_1:-61669233 Msa0741900:three_prime_UTR
TTTAAAACTTACCTTGCAAG+TGG 0.500492 5_1:+61670541 None:intergenic
TTGAAGGAATGAAAGTGTCT+TGG 0.509601 5_1:-61669167 Msa0741900:three_prime_UTR
AATTATATACAGAAACAATT+GGG 0.512388 5_1:-61669440 Msa0741900:CDS
GATTTAGTTGTTTGTCCTGA+AGG 0.517928 5_1:-61669710 Msa0741900:CDS
CAAGTGCTAATTTGTAAGGA+AGG 0.518754 5_1:+61669999 None:intergenic
TTTATGAGTTGTGACATTGA+AGG 0.520068 5_1:-61669183 Msa0741900:three_prime_UTR
ACAAGCCTTAGAAGAACCAT+TGG 0.520143 5_1:+61671250 None:intergenic
ATGAGGTTCTTGCTTCAACT+GGG 0.520195 5_1:-61670799 Msa0741900:CDS
TCATATTCAAATTATTGGGA+AGG 0.522054 5_1:-61669513 Msa0741900:CDS
AGGACATGGAAAATGTTTCA+AGG 0.522825 5_1:-61670868 Msa0741900:CDS
AACAATAAACATTCATGTGA+GGG 0.529496 5_1:+61669113 None:intergenic
TTGAAAGAGTATTTGAGTGT+CGG 0.531963 5_1:-61670728 Msa0741900:CDS
AATCCTTCTACCATAACTCT+AGG 0.533488 5_1:+61670752 None:intergenic
GGACATGGAAAATGTTTCAA+GGG 0.537352 5_1:-61670867 Msa0741900:CDS
AAATATCATGATGTTTCCAA+TGG 0.537685 5_1:-61671266 None:intergenic
TGATGCTTGCAGGGAATGAA+GGG 0.541271 5_1:-61669367 Msa0741900:CDS
AAGCCATTAATATTTCATGA+TGG 0.544073 5_1:-61670124 Msa0741900:CDS
TGATCACAAATCAAGAGTAA+AGG 0.545848 5_1:+61670944 None:intergenic
AACAATTGGGTGATGCTTTG+GGG 0.546847 5_1:-61669427 Msa0741900:CDS
CTATGCTTAACAAGTAAGCC+AGG 0.563130 5_1:+61670644 None:intergenic
ATGCAAAAGTTACTAAGAGA+AGG 0.576242 5_1:-61669734 Msa0741900:CDS
GTCCAAACTCAATCATGCCA+AGG 0.578628 5_1:-61670159 Msa0741900:CDS
GAACATGTAGAGTGTTGCTA+AGG 0.578977 5_1:+61670078 None:intergenic
AAACAATAAACATTCATGTG+AGG 0.581364 5_1:+61669112 None:intergenic
AAAGAACAAGGTTGATGAGG+TGG 0.586437 5_1:+61671130 None:intergenic
TGGTTTAAGAATAAAGGACA+TGG 0.587117 5_1:-61670882 Msa0741900:CDS
TAGAGTGTTGCTAAGGGTGT+TGG 0.593516 5_1:+61670085 None:intergenic
AGGAAAGTCAAGTGTTGAAG+TGG 0.599119 5_1:-61669465 Msa0741900:CDS
ACATGAGTATTCATTGCCAC+AGG 0.603998 5_1:+61669617 None:intergenic
GCAAGAACCTCATAAACTTG+AGG 0.607353 5_1:+61670809 None:intergenic
ATAAGTATATGATGCTTGCA+GGG 0.611754 5_1:-61669376 Msa0741900:CDS
ACACTTCAATCCGCTTGCTG+TGG 0.619110 5_1:+61669577 None:intergenic
AAGGAAGGAAAATACCAAGA+AGG 0.620364 5_1:+61670014 None:intergenic
TCCAAACTCAATCATGCCAA+GGG 0.637627 5_1:-61670158 Msa0741900:CDS
ACAAGAGACAGAAAACAAGA+TGG 0.639648 5_1:-61669764 Msa0741900:CDS
ATAACAAAATGTGATTTACA+AGG 0.641448 5_1:-61671100 Msa0741900:CDS
GGAAAAGAACAAGGTTGATG+AGG 0.647328 5_1:+61671127 None:intergenic
CAACACTCTACATGTTCATG+TGG 0.648188 5_1:-61670072 Msa0741900:CDS
AAAGAACTTACATGTGCTGG+AGG 0.654606 5_1:-61669485 Msa0741900:CDS
CTTGAATTAGGAGTTTGGAG+TGG 0.656078 5_1:-61669980 Msa0741900:CDS
GTTATACTAGGAAAAGAACA+AGG 0.671705 5_1:+61671118 None:intergenic
GGCTAATGAGATAGTGCCTG+TGG 0.689080 5_1:-61669633 Msa0741900:CDS
AACATGTAGAGTGTTGCTAA+GGG 0.697607 5_1:+61670079 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATTATTATTTTCTAACTATT+GGG - chr5_1:61669883-61669902 Msa0741900:CDS 10.0%
!! TAAAATTAAAATTCCAAATA+AGG + chr5_1:61670001-61670020 None:intergenic 10.0%
!! TAAATTAATTATGTTCTATA+TGG + chr5_1:61670059-61670078 None:intergenic 10.0%
!!! TACTTCATTTTATTTATTTT+TGG - chr5_1:61671086-61671105 Msa0741900:CDS 10.0%
!!! TATTGTTTTAAAAATTGAAT+CGG - chr5_1:61671241-61671260 Msa0741900:CDS 10.0%
!!! ATTATTATTTTCTAACTATT+GGG - chr5_1:61669883-61669902 Msa0741900:CDS 10.0%
!! TAAAATTAAAATTCCAAATA+AGG + chr5_1:61670001-61670020 None:intergenic 10.0%
!! TAAATTAATTATGTTCTATA+TGG + chr5_1:61670059-61670078 None:intergenic 10.0%
!!! TACTTCATTTTATTTATTTT+TGG - chr5_1:61671086-61671105 Msa0741900:CDS 10.0%
!!! TATTGTTTTAAAAATTGAAT+CGG - chr5_1:61671241-61671260 Msa0741900:CDS 10.0%
!!! CATTATTATTTTCTAACTAT+TGG - chr5_1:61669882-61669901 Msa0741900:CDS 15.0%
!!! AAGGAAATAATAATGTTTTT+TGG + chr5_1:61669982-61670001 None:intergenic 15.0%
!! AACATTATTATTTCCTTATT+TGG - chr5_1:61669985-61670004 Msa0741900:CDS 15.0%
!! ATAATTTGAATATGATAACT+TGG + chr5_1:61670820-61670839 None:intergenic 15.0%
!! AGTTATCATATTCAAATTAT+TGG - chr5_1:61670820-61670839 Msa0741900:CDS 15.0%
!! GTTATCATATTCAAATTATT+GGG - chr5_1:61670821-61670840 Msa0741900:CDS 15.0%
!! TAATTATATACAGAAACAAT+TGG - chr5_1:61670897-61670916 Msa0741900:CDS 15.0%
!! AATTATATACAGAAACAATT+GGG - chr5_1:61670898-61670917 Msa0741900:CDS 15.0%
!!! CATTATTATTTTCTAACTAT+TGG - chr5_1:61669882-61669901 Msa0741900:CDS 15.0%
!!! AAGGAAATAATAATGTTTTT+TGG + chr5_1:61669982-61670001 None:intergenic 15.0%
!! AACATTATTATTTCCTTATT+TGG - chr5_1:61669985-61670004 Msa0741900:CDS 15.0%
!! ATAATTTGAATATGATAACT+TGG + chr5_1:61670820-61670839 None:intergenic 15.0%
!! AGTTATCATATTCAAATTAT+TGG - chr5_1:61670820-61670839 Msa0741900:CDS 15.0%
!! GTTATCATATTCAAATTATT+GGG - chr5_1:61670821-61670840 Msa0741900:CDS 15.0%
!! TAATTATATACAGAAACAAT+TGG - chr5_1:61670897-61670916 Msa0741900:CDS 15.0%
!! AATTATATACAGAAACAATT+GGG - chr5_1:61670898-61670917 Msa0741900:CDS 15.0%
!!! AAATCACATTTTGTTATACT+AGG + chr5_1:61669235-61669254 None:intergenic 20.0%
!! ATAACAAAATGTGATTTACA+AGG - chr5_1:61669238-61669257 Msa0741900:three_prime_UTR 20.0%
!! AGATTCTCTAAATAAAACTT+TGG + chr5_1:61669505-61669524 None:intergenic 20.0%
!!! AACAAATTTTTTTAAAGGGT+TGG - chr5_1:61669818-61669837 Msa0741900:CDS 20.0%
!! ATTGCTAAAATAATTCCAAT+TGG + chr5_1:61670295-61670314 None:intergenic 20.0%
!!! TGTTTGGTTTTGTTTTTTTA+GGG + chr5_1:61670411-61670430 None:intergenic 20.0%
!!! TTGTTTGGTTTTGTTTTTTT+AGG + chr5_1:61670412-61670431 None:intergenic 20.0%
!! AAAAAAACAAAACCAAACAA+AGG - chr5_1:61670412-61670431 Msa0741900:intron 20.0%
!! GAAGTATAAAAAAAACAAGA+TGG + chr5_1:61671072-61671091 None:intergenic 20.0%
!!! AAATCACATTTTGTTATACT+AGG + chr5_1:61669235-61669254 None:intergenic 20.0%
!! ATAACAAAATGTGATTTACA+AGG - chr5_1:61669238-61669257 Msa0741900:three_prime_UTR 20.0%
!! AGATTCTCTAAATAAAACTT+TGG + chr5_1:61669505-61669524 None:intergenic 20.0%
!!! AACAAATTTTTTTAAAGGGT+TGG - chr5_1:61669818-61669837 Msa0741900:CDS 20.0%
!! ATTGCTAAAATAATTCCAAT+TGG + chr5_1:61670295-61670314 None:intergenic 20.0%
!!! TGTTTGGTTTTGTTTTTTTA+GGG + chr5_1:61670411-61670430 None:intergenic 20.0%
!!! TTGTTTGGTTTTGTTTTTTT+AGG + chr5_1:61670412-61670431 None:intergenic 20.0%
!! AAAAAAACAAAACCAAACAA+AGG - chr5_1:61670412-61670431 Msa0741900:intron 20.0%
!! GAAGTATAAAAAAAACAAGA+TGG + chr5_1:61671072-61671091 None:intergenic 20.0%
! GCAAGAAAAATGAAAAGTTA+TGG - chr5_1:61669157-61669176 Msa0741900:three_prime_UTR 25.0%
! AAAATGAATGAGACCTTAAT+AGG + chr5_1:61669303-61669322 None:intergenic 25.0%
!! ATGACTTTTATAACCTTTTG+TGG - chr5_1:61669436-61669455 Msa0741900:CDS 25.0%
! CTTTATTCTTAAACCACAAA+AGG + chr5_1:61669452-61669471 None:intergenic 25.0%
!! CTTTTGTGGTTTAAGAATAA+AGG - chr5_1:61669450-61669469 Msa0741900:CDS 25.0%
! TCATGAAATATTAATGGCTT+TGG + chr5_1:61670214-61670233 None:intergenic 25.0%
! AAGCCATTAATATTTCATGA+TGG - chr5_1:61670214-61670233 Msa0741900:intron 25.0%
! CTTCCATCATGAAATATTAA+TGG + chr5_1:61670220-61670239 None:intergenic 25.0%
!! AATTCAAGTGCTAATTTGTA+AGG + chr5_1:61670346-61670365 None:intergenic 25.0%
! TACAAATTAGCACTTGAATT+AGG - chr5_1:61670346-61670365 Msa0741900:intron 25.0%
! GAACTAAACCTTAACAAATA+TGG + chr5_1:61670670-61670689 None:intergenic 25.0%
! GGATTCATCAAGAAAAAAAT+AGG + chr5_1:61670793-61670812 None:intergenic 25.0%
! TCATATTCAAATTATTGGGA+AGG - chr5_1:61670825-61670844 Msa0741900:CDS 25.0%
!! TTGAGTGTACAAATTTTACT+AGG - chr5_1:61670935-61670954 Msa0741900:CDS 25.0%
!! TTGGTTTCCAAATTAATTTG+TGG - chr5_1:61671105-61671124 Msa0741900:CDS 25.0%
! AACAAGACCACAAATTAATT+TGG + chr5_1:61671115-61671134 None:intergenic 25.0%
! AACAATAAACATTCATGTGA+GGG + chr5_1:61671228-61671247 None:intergenic 25.0%
! AAACAATAAACATTCATGTG+AGG + chr5_1:61671229-61671248 None:intergenic 25.0%
! ATTGAATCGGATGATTTAAT+CGG - chr5_1:61671254-61671273 Msa0741900:CDS 25.0%
! GCAAGAAAAATGAAAAGTTA+TGG - chr5_1:61669157-61669176 Msa0741900:three_prime_UTR 25.0%
! AAAATGAATGAGACCTTAAT+AGG + chr5_1:61669303-61669322 None:intergenic 25.0%
!! ATGACTTTTATAACCTTTTG+TGG - chr5_1:61669436-61669455 Msa0741900:CDS 25.0%
! CTTTATTCTTAAACCACAAA+AGG + chr5_1:61669452-61669471 None:intergenic 25.0%
!! CTTTTGTGGTTTAAGAATAA+AGG - chr5_1:61669450-61669469 Msa0741900:CDS 25.0%
! TCATGAAATATTAATGGCTT+TGG + chr5_1:61670214-61670233 None:intergenic 25.0%
! AAGCCATTAATATTTCATGA+TGG - chr5_1:61670214-61670233 Msa0741900:intron 25.0%
! CTTCCATCATGAAATATTAA+TGG + chr5_1:61670220-61670239 None:intergenic 25.0%
!! AATTCAAGTGCTAATTTGTA+AGG + chr5_1:61670346-61670365 None:intergenic 25.0%
! TACAAATTAGCACTTGAATT+AGG - chr5_1:61670346-61670365 Msa0741900:intron 25.0%
! GAACTAAACCTTAACAAATA+TGG + chr5_1:61670670-61670689 None:intergenic 25.0%
! GGATTCATCAAGAAAAAAAT+AGG + chr5_1:61670793-61670812 None:intergenic 25.0%
! TCATATTCAAATTATTGGGA+AGG - chr5_1:61670825-61670844 Msa0741900:CDS 25.0%
!! TTGAGTGTACAAATTTTACT+AGG - chr5_1:61670935-61670954 Msa0741900:CDS 25.0%
!! TTGGTTTCCAAATTAATTTG+TGG - chr5_1:61671105-61671124 Msa0741900:CDS 25.0%
! AACAAGACCACAAATTAATT+TGG + chr5_1:61671115-61671134 None:intergenic 25.0%
! AACAATAAACATTCATGTGA+GGG + chr5_1:61671228-61671247 None:intergenic 25.0%
! AAACAATAAACATTCATGTG+AGG + chr5_1:61671229-61671248 None:intergenic 25.0%
! ATTGAATCGGATGATTTAAT+CGG - chr5_1:61671254-61671273 Msa0741900:CDS 25.0%
AGTATGAATTTGCAAGTAGT+TGG + chr5_1:61669129-61669148 None:intergenic 30.0%
GTTATACTAGGAAAAGAACA+AGG + chr5_1:61669223-61669242 None:intergenic 30.0%
ACATTCATAGAGTCCTATTA+AGG - chr5_1:61669287-61669306 Msa0741900:three_prime_UTR 30.0%
AAAGCAACAAGCATGAAATA+AGG + chr5_1:61669328-61669347 None:intergenic 30.0%
TGATCACAAATCAAGAGTAA+AGG + chr5_1:61669397-61669416 None:intergenic 30.0%
TGGTTTAAGAATAAAGGACA+TGG - chr5_1:61669456-61669475 Msa0741900:CDS 30.0%
TCTTAATCCTCAAGTTTATG+AGG - chr5_1:61669522-61669541 Msa0741900:CDS 30.0%
!! TTGAAAGAGTATTTGAGTGT+CGG - chr5_1:61669610-61669629 Msa0741900:CDS 30.0%
!!! AGAGCACTTAAAGAGTATTT+TGG - chr5_1:61669715-61669734 Msa0741900:CDS 30.0%
AGAAAACCTGATATTGGAAT+TGG - chr5_1:61669742-61669761 Msa0741900:CDS 30.0%
! TTTAAAACTTACCTTGCAAG+TGG + chr5_1:61669800-61669819 None:intergenic 30.0%
!!! TTTTTTTAAAGGGTTGGCAA+AGG - chr5_1:61669824-61669843 Msa0741900:CDS 30.0%
GCAATTTATAGAATCCTTCT+TGG - chr5_1:61670310-61670329 Msa0741900:intron 30.0%
GGCATAGATCTAAAAATCAA+AGG - chr5_1:61670379-61670398 Msa0741900:intron 30.0%
ACAAACAAAACACCTTTGTT+TGG + chr5_1:61670427-61670446 None:intergenic 30.0%
!! TTTTGTTTGTATGCACACAT+AGG - chr5_1:61670437-61670456 Msa0741900:intron 30.0%
CTATATGTTACTGCAGTTAA+AGG + chr5_1:61670505-61670524 None:intergenic 30.0%
!!! GTTAATCTCACTGTTTTGAT+TGG + chr5_1:61670556-61670575 None:intergenic 30.0%
ATGCAAAAGTTACTAAGAGA+AGG - chr5_1:61670604-61670623 Msa0741900:CDS 30.0%
! GTAGAGAACCATATTTGTTA+AGG - chr5_1:61670659-61670678 Msa0741900:CDS 30.0%
TGAATATGATAACTTGGCTT+AGG + chr5_1:61670814-61670833 None:intergenic 30.0%
! AGTGTACAAATTTTACTAGG+AGG - chr5_1:61670938-61670957 Msa0741900:CDS 30.0%
! GTGTACAAATTTTACTAGGA+GGG - chr5_1:61670939-61670958 Msa0741900:CDS 30.0%
ATAAGTATATGATGCTTGCA+GGG - chr5_1:61670962-61670981 Msa0741900:CDS 30.0%
TTTATGAGTTGTGACATTGA+AGG - chr5_1:61671155-61671174 Msa0741900:CDS 30.0%
AGTATGAATTTGCAAGTAGT+TGG + chr5_1:61669129-61669148 None:intergenic 30.0%
GTTATACTAGGAAAAGAACA+AGG + chr5_1:61669223-61669242 None:intergenic 30.0%
ACATTCATAGAGTCCTATTA+AGG - chr5_1:61669287-61669306 Msa0741900:three_prime_UTR 30.0%
AAAGCAACAAGCATGAAATA+AGG + chr5_1:61669328-61669347 None:intergenic 30.0%
TGATCACAAATCAAGAGTAA+AGG + chr5_1:61669397-61669416 None:intergenic 30.0%
TGGTTTAAGAATAAAGGACA+TGG - chr5_1:61669456-61669475 Msa0741900:CDS 30.0%
TCTTAATCCTCAAGTTTATG+AGG - chr5_1:61669522-61669541 Msa0741900:CDS 30.0%
!! TTGAAAGAGTATTTGAGTGT+CGG - chr5_1:61669610-61669629 Msa0741900:CDS 30.0%
!!! AGAGCACTTAAAGAGTATTT+TGG - chr5_1:61669715-61669734 Msa0741900:CDS 30.0%
AGAAAACCTGATATTGGAAT+TGG - chr5_1:61669742-61669761 Msa0741900:CDS 30.0%
! TTTAAAACTTACCTTGCAAG+TGG + chr5_1:61669800-61669819 None:intergenic 30.0%
!!! TTTTTTTAAAGGGTTGGCAA+AGG - chr5_1:61669824-61669843 Msa0741900:CDS 30.0%
GCAATTTATAGAATCCTTCT+TGG - chr5_1:61670310-61670329 Msa0741900:intron 30.0%
GGCATAGATCTAAAAATCAA+AGG - chr5_1:61670379-61670398 Msa0741900:intron 30.0%
ACAAACAAAACACCTTTGTT+TGG + chr5_1:61670427-61670446 None:intergenic 30.0%
!! TTTTGTTTGTATGCACACAT+AGG - chr5_1:61670437-61670456 Msa0741900:intron 30.0%
CTATATGTTACTGCAGTTAA+AGG + chr5_1:61670505-61670524 None:intergenic 30.0%
!!! GTTAATCTCACTGTTTTGAT+TGG + chr5_1:61670556-61670575 None:intergenic 30.0%
ATGCAAAAGTTACTAAGAGA+AGG - chr5_1:61670604-61670623 Msa0741900:CDS 30.0%
! GTAGAGAACCATATTTGTTA+AGG - chr5_1:61670659-61670678 Msa0741900:CDS 30.0%
TGAATATGATAACTTGGCTT+AGG + chr5_1:61670814-61670833 None:intergenic 30.0%
! AGTGTACAAATTTTACTAGG+AGG - chr5_1:61670938-61670957 Msa0741900:CDS 30.0%
! GTGTACAAATTTTACTAGGA+GGG - chr5_1:61670939-61670958 Msa0741900:CDS 30.0%
ATAAGTATATGATGCTTGCA+GGG - chr5_1:61670962-61670981 Msa0741900:CDS 30.0%
TTTATGAGTTGTGACATTGA+AGG - chr5_1:61671155-61671174 Msa0741900:CDS 30.0%
TGTTTCCAATGGTTCTTCTA+AGG - chr5_1:61669083-61669102 Msa0741900:three_prime_UTR 35.0%
!! TCTTCTAAGGCTTGTAGATT+TGG - chr5_1:61669096-61669115 Msa0741900:three_prime_UTR 35.0%
!!! TTCATGCTTGTTGCTTTTGA+AGG - chr5_1:61669331-61669350 Msa0741900:CDS 35.0%
AGGACATGGAAAATGTTTCA+AGG - chr5_1:61669470-61669489 Msa0741900:CDS 35.0%
GGACATGGAAAATGTTTCAA+GGG - chr5_1:61669471-61669490 Msa0741900:CDS 35.0%
AATCCTTCTACCATAACTCT+AGG + chr5_1:61669589-61669608 None:intergenic 35.0%
GGTGATAGAAAACCTGATAT+TGG - chr5_1:61669736-61669755 Msa0741900:CDS 35.0%
GAAGTTCCAATTCCAATATC+AGG + chr5_1:61669751-61669770 None:intergenic 35.0%
! TCTTTTCATTTCCACTTGCA+AGG - chr5_1:61669786-61669805 Msa0741900:CDS 35.0%
!! AACATGTAGAGTGTTGCTAA+GGG + chr5_1:61670262-61670281 None:intergenic 35.0%
AAGGAAGGAAAATACCAAGA+AGG + chr5_1:61670327-61670346 None:intergenic 35.0%
! CAAGTGCTAATTTGTAAGGA+AGG + chr5_1:61670342-61670361 None:intergenic 35.0%
TAGCACTTGAATTAGGAGTT+TGG - chr5_1:61670353-61670372 Msa0741900:intron 35.0%
AATGACGTGCTTAAGAAAAC+AGG + chr5_1:61670475-61670494 None:intergenic 35.0%
ACAAGAGACAGAAAACAAGA+TGG - chr5_1:61670574-61670593 Msa0741900:CDS 35.0%
GATTTAGTTGTTTGTCCTGA+AGG - chr5_1:61670628-61670647 Msa0741900:CDS 35.0%
! TAGTTCATTGTTTGCTGAGT+TGG - chr5_1:61670684-61670703 Msa0741900:CDS 35.0%
! ACTCATGTCAGCATGTTTTA+TGG - chr5_1:61670736-61670755 Msa0741900:CDS 35.0%
! CTCATGTCAGCATGTTTTAT+GGG - chr5_1:61670737-61670756 Msa0741900:CDS 35.0%
AAACAATTGGGTGATGCTTT+GGG - chr5_1:61670910-61670929 Msa0741900:CDS 35.0%
GATAAGTATATGATGCTTGC+AGG - chr5_1:61670961-61670980 Msa0741900:CDS 35.0%
!! TTGAAGGAATGAAAGTGTCT+TGG - chr5_1:61671171-61671190 Msa0741900:CDS 35.0%
TGTTTCCAATGGTTCTTCTA+AGG - chr5_1:61669083-61669102 Msa0741900:three_prime_UTR 35.0%
!! TCTTCTAAGGCTTGTAGATT+TGG - chr5_1:61669096-61669115 Msa0741900:three_prime_UTR 35.0%
!!! TTCATGCTTGTTGCTTTTGA+AGG - chr5_1:61669331-61669350 Msa0741900:CDS 35.0%
AGGACATGGAAAATGTTTCA+AGG - chr5_1:61669470-61669489 Msa0741900:CDS 35.0%
GGACATGGAAAATGTTTCAA+GGG - chr5_1:61669471-61669490 Msa0741900:CDS 35.0%
AATCCTTCTACCATAACTCT+AGG + chr5_1:61669589-61669608 None:intergenic 35.0%
GGTGATAGAAAACCTGATAT+TGG - chr5_1:61669736-61669755 Msa0741900:CDS 35.0%
GAAGTTCCAATTCCAATATC+AGG + chr5_1:61669751-61669770 None:intergenic 35.0%
! TCTTTTCATTTCCACTTGCA+AGG - chr5_1:61669786-61669805 Msa0741900:CDS 35.0%
!! AACATGTAGAGTGTTGCTAA+GGG + chr5_1:61670262-61670281 None:intergenic 35.0%
AAGGAAGGAAAATACCAAGA+AGG + chr5_1:61670327-61670346 None:intergenic 35.0%
! CAAGTGCTAATTTGTAAGGA+AGG + chr5_1:61670342-61670361 None:intergenic 35.0%
TAGCACTTGAATTAGGAGTT+TGG - chr5_1:61670353-61670372 Msa0741900:intron 35.0%
AATGACGTGCTTAAGAAAAC+AGG + chr5_1:61670475-61670494 None:intergenic 35.0%
ACAAGAGACAGAAAACAAGA+TGG - chr5_1:61670574-61670593 Msa0741900:CDS 35.0%
GATTTAGTTGTTTGTCCTGA+AGG - chr5_1:61670628-61670647 Msa0741900:CDS 35.0%
! TAGTTCATTGTTTGCTGAGT+TGG - chr5_1:61670684-61670703 Msa0741900:CDS 35.0%
! ACTCATGTCAGCATGTTTTA+TGG - chr5_1:61670736-61670755 Msa0741900:CDS 35.0%
! CTCATGTCAGCATGTTTTAT+GGG - chr5_1:61670737-61670756 Msa0741900:CDS 35.0%
AAACAATTGGGTGATGCTTT+GGG - chr5_1:61670910-61670929 Msa0741900:CDS 35.0%
GATAAGTATATGATGCTTGC+AGG - chr5_1:61670961-61670980 Msa0741900:CDS 35.0%
!! TTGAAGGAATGAAAGTGTCT+TGG - chr5_1:61671171-61671190 Msa0741900:CDS 35.0%
ACAAGCCTTAGAAGAACCAT+TGG + chr5_1:61669091-61669110 None:intergenic 40.0%
!! AAAGAACAAGGTTGATGAGG+TGG + chr5_1:61669211-61669230 None:intergenic 40.0%
!! GGAAAAGAACAAGGTTGATG+AGG + chr5_1:61669214-61669233 None:intergenic 40.0%
!!! ATGCTTGTTGCTTTTGAAGG+TGG - chr5_1:61669334-61669353 Msa0741900:CDS 40.0%
GCAAGAACCTCATAAACTTG+AGG + chr5_1:61669532-61669551 None:intergenic 40.0%
TATGAGGTTCTTGCTTCAAC+TGG - chr5_1:61669538-61669557 Msa0741900:CDS 40.0%
ATGAGGTTCTTGCTTCAACT+GGG - chr5_1:61669539-61669558 Msa0741900:CDS 40.0%
!!! TTGAGTGTCGGTGATGTTTT+AGG - chr5_1:61669622-61669641 Msa0741900:CDS 40.0%
! ACATTTGGTTGCTACTTCAC+TGG - chr5_1:61669658-61669677 Msa0741900:CDS 40.0%
CTATGCTTAACAAGTAAGCC+AGG + chr5_1:61669697-61669716 None:intergenic 40.0%
! TGTGTGAGTGTTGTAAACCT+GGG - chr5_1:61669933-61669952 Msa0741900:CDS 40.0%
TTCCTGTCATAATCATGCAG+AGG + chr5_1:61670125-61670144 None:intergenic 40.0%
TCCAAACTCAATCATGCCAA+GGG - chr5_1:61670180-61670199 Msa0741900:CDS 40.0%
!! GAACATGTAGAGTGTTGCTA+AGG + chr5_1:61670263-61670282 None:intergenic 40.0%
CAACACTCTACATGTTCATG+TGG - chr5_1:61670266-61670285 Msa0741900:intron 40.0%
ATGTTCATGTGGCTACCAAT+TGG - chr5_1:61670277-61670296 Msa0741900:intron 40.0%
CTTGAATTAGGAGTTTGGAG+TGG - chr5_1:61670358-61670377 Msa0741900:intron 40.0%
ATGCACACATAGGACATTGT+TGG - chr5_1:61670447-61670466 Msa0741900:intron 40.0%
TCTCTACATGTTGTTCCTTC+AGG + chr5_1:61670646-61670665 None:intergenic 40.0%
ACATGAGTATTCATTGCCAC+AGG + chr5_1:61670724-61670743 None:intergenic 40.0%
CCAGCACATGTAAGTTCTTT+AGG + chr5_1:61670853-61670872 None:intergenic 40.0%
CCTAAAGAACTTACATGTGC+TGG - chr5_1:61670850-61670869 Msa0741900:CDS 40.0%
AAAGAACTTACATGTGCTGG+AGG - chr5_1:61670853-61670872 Msa0741900:CDS 40.0%
!! AGGAAAGTCAAGTGTTGAAG+TGG - chr5_1:61670873-61670892 Msa0741900:CDS 40.0%
GAAACAATTGGGTGATGCTT+TGG - chr5_1:61670909-61670928 Msa0741900:CDS 40.0%
AACAATTGGGTGATGCTTTG+GGG - chr5_1:61670911-61670930 Msa0741900:CDS 40.0%
!! GTGGTCTTGTTTGTTCTTGT+TGG - chr5_1:61671124-61671143 Msa0741900:CDS 40.0%
TAAACATTCATGTGAGGGCT+AGG + chr5_1:61671223-61671242 None:intergenic 40.0%
ACAAGCCTTAGAAGAACCAT+TGG + chr5_1:61669091-61669110 None:intergenic 40.0%
!! AAAGAACAAGGTTGATGAGG+TGG + chr5_1:61669211-61669230 None:intergenic 40.0%
!! GGAAAAGAACAAGGTTGATG+AGG + chr5_1:61669214-61669233 None:intergenic 40.0%
!!! ATGCTTGTTGCTTTTGAAGG+TGG - chr5_1:61669334-61669353 Msa0741900:CDS 40.0%
GCAAGAACCTCATAAACTTG+AGG + chr5_1:61669532-61669551 None:intergenic 40.0%
TATGAGGTTCTTGCTTCAAC+TGG - chr5_1:61669538-61669557 Msa0741900:CDS 40.0%
ATGAGGTTCTTGCTTCAACT+GGG - chr5_1:61669539-61669558 Msa0741900:CDS 40.0%
!!! TTGAGTGTCGGTGATGTTTT+AGG - chr5_1:61669622-61669641 Msa0741900:CDS 40.0%
! ACATTTGGTTGCTACTTCAC+TGG - chr5_1:61669658-61669677 Msa0741900:CDS 40.0%
CTATGCTTAACAAGTAAGCC+AGG + chr5_1:61669697-61669716 None:intergenic 40.0%
! TGTGTGAGTGTTGTAAACCT+GGG - chr5_1:61669933-61669952 Msa0741900:CDS 40.0%
TTCCTGTCATAATCATGCAG+AGG + chr5_1:61670125-61670144 None:intergenic 40.0%
TCCAAACTCAATCATGCCAA+GGG - chr5_1:61670180-61670199 Msa0741900:CDS 40.0%
!! GAACATGTAGAGTGTTGCTA+AGG + chr5_1:61670263-61670282 None:intergenic 40.0%
CAACACTCTACATGTTCATG+TGG - chr5_1:61670266-61670285 Msa0741900:intron 40.0%
ATGTTCATGTGGCTACCAAT+TGG - chr5_1:61670277-61670296 Msa0741900:intron 40.0%
CTTGAATTAGGAGTTTGGAG+TGG - chr5_1:61670358-61670377 Msa0741900:intron 40.0%
ATGCACACATAGGACATTGT+TGG - chr5_1:61670447-61670466 Msa0741900:intron 40.0%
TCTCTACATGTTGTTCCTTC+AGG + chr5_1:61670646-61670665 None:intergenic 40.0%
ACATGAGTATTCATTGCCAC+AGG + chr5_1:61670724-61670743 None:intergenic 40.0%
CCAGCACATGTAAGTTCTTT+AGG + chr5_1:61670853-61670872 None:intergenic 40.0%
CCTAAAGAACTTACATGTGC+TGG - chr5_1:61670850-61670869 Msa0741900:CDS 40.0%
AAAGAACTTACATGTGCTGG+AGG - chr5_1:61670853-61670872 Msa0741900:CDS 40.0%
!! AGGAAAGTCAAGTGTTGAAG+TGG - chr5_1:61670873-61670892 Msa0741900:CDS 40.0%
GAAACAATTGGGTGATGCTT+TGG - chr5_1:61670909-61670928 Msa0741900:CDS 40.0%
AACAATTGGGTGATGCTTTG+GGG - chr5_1:61670911-61670930 Msa0741900:CDS 40.0%
!! GTGGTCTTGTTTGTTCTTGT+TGG - chr5_1:61671124-61671143 Msa0741900:CDS 40.0%
TAAACATTCATGTGAGGGCT+AGG + chr5_1:61671223-61671242 None:intergenic 40.0%
CACAAGTGTGCCTAGAGTTA+TGG - chr5_1:61669576-61669595 Msa0741900:CDS 45.0%
GTGCCTAGAGTTATGGTAGA+AGG - chr5_1:61669583-61669602 Msa0741900:CDS 45.0%
GGCACAGAGTTACACACATT+TGG - chr5_1:61669643-61669662 Msa0741900:CDS 45.0%
!!! ACTGGTTTTCTCACTAGTCC+TGG - chr5_1:61669676-61669695 Msa0741900:CDS 45.0%
! GTGTGTGAGTGTTGTAAACC+TGG - chr5_1:61669932-61669951 Msa0741900:CDS 45.0%
! GTGTGAGTGTTGTAAACCTG+GGG - chr5_1:61669934-61669953 Msa0741900:CDS 45.0%
GAAATCGAACTCAATACCCC+AGG + chr5_1:61669953-61669972 None:intergenic 45.0%
CTGTCATAATCATGCAGAGG+TGG + chr5_1:61670122-61670141 None:intergenic 45.0%
CACCTCTGCATGATTATGAC+AGG - chr5_1:61670120-61670139 Msa0741900:CDS 45.0%
GTCCAAACTCAATCATGCCA+AGG - chr5_1:61670179-61670198 Msa0741900:CDS 45.0%
TCCCTTGGCATGATTGAGTT+TGG + chr5_1:61670184-61670203 None:intergenic 45.0%
!! GGCTTTGGATATTTGTCCCT+TGG + chr5_1:61670199-61670218 None:intergenic 45.0%
!! TAGAGTGTTGCTAAGGGTGT+TGG + chr5_1:61670256-61670275 None:intergenic 45.0%
! TTTTATGGGACCACAGCAAG+CGG - chr5_1:61670751-61670770 Msa0741900:CDS 45.0%
!! AGCAAGCGGATTGAAGTGTT+TGG - chr5_1:61670765-61670784 Msa0741900:CDS 45.0%
ATGATGCTTGCAGGGAATGA+AGG - chr5_1:61670970-61670989 Msa0741900:CDS 45.0%
TGATGCTTGCAGGGAATGAA+GGG - chr5_1:61670971-61670990 Msa0741900:CDS 45.0%
CACAAGTGTGCCTAGAGTTA+TGG - chr5_1:61669576-61669595 Msa0741900:CDS 45.0%
GTGCCTAGAGTTATGGTAGA+AGG - chr5_1:61669583-61669602 Msa0741900:CDS 45.0%
GGCACAGAGTTACACACATT+TGG - chr5_1:61669643-61669662 Msa0741900:CDS 45.0%
!!! ACTGGTTTTCTCACTAGTCC+TGG - chr5_1:61669676-61669695 Msa0741900:CDS 45.0%
! GTGTGTGAGTGTTGTAAACC+TGG - chr5_1:61669932-61669951 Msa0741900:CDS 45.0%
! GTGTGAGTGTTGTAAACCTG+GGG - chr5_1:61669934-61669953 Msa0741900:CDS 45.0%
GAAATCGAACTCAATACCCC+AGG + chr5_1:61669953-61669972 None:intergenic 45.0%
CTGTCATAATCATGCAGAGG+TGG + chr5_1:61670122-61670141 None:intergenic 45.0%
CACCTCTGCATGATTATGAC+AGG - chr5_1:61670120-61670139 Msa0741900:CDS 45.0%
GTCCAAACTCAATCATGCCA+AGG - chr5_1:61670179-61670198 Msa0741900:CDS 45.0%
TCCCTTGGCATGATTGAGTT+TGG + chr5_1:61670184-61670203 None:intergenic 45.0%
!! GGCTTTGGATATTTGTCCCT+TGG + chr5_1:61670199-61670218 None:intergenic 45.0%
!! TAGAGTGTTGCTAAGGGTGT+TGG + chr5_1:61670256-61670275 None:intergenic 45.0%
! TTTTATGGGACCACAGCAAG+CGG - chr5_1:61670751-61670770 Msa0741900:CDS 45.0%
!! AGCAAGCGGATTGAAGTGTT+TGG - chr5_1:61670765-61670784 Msa0741900:CDS 45.0%
ATGATGCTTGCAGGGAATGA+AGG - chr5_1:61670970-61670989 Msa0741900:CDS 45.0%
TGATGCTTGCAGGGAATGAA+GGG - chr5_1:61670971-61670990 Msa0741900:CDS 45.0%
!!! TTTTAAACAAATTTTTTTAA+AGG - chr5_1:61669813-61669832 Msa0741900:CDS 5.0%
!!! TTTAAACAAATTTTTTTAAA+GGG - chr5_1:61669814-61669833 Msa0741900:CDS 5.0%
!!! TTTTAAACAAATTTTTTTAA+AGG - chr5_1:61669813-61669832 Msa0741900:CDS 5.0%
!!! TTTAAACAAATTTTTTTAAA+GGG - chr5_1:61669814-61669833 Msa0741900:CDS 5.0%
TTGGGTCTAGCGCAAGTAGT+TGG - chr5_1:61669901-61669920 Msa0741900:CDS 50.0%
GGCTAATGAGATAGTGCCTG+TGG - chr5_1:61670705-61670724 Msa0741900:CDS 50.0%
! ACACTTCAATCCGCTTGCTG+TGG + chr5_1:61670764-61670783 None:intergenic 50.0%
TTGGGTCTAGCGCAAGTAGT+TGG - chr5_1:61669901-61669920 Msa0741900:CDS 50.0%
GGCTAATGAGATAGTGCCTG+TGG - chr5_1:61670705-61670724 Msa0741900:CDS 50.0%
! ACACTTCAATCCGCTTGCTG+TGG + chr5_1:61670764-61670783 None:intergenic 50.0%
Chromosome Type Strat End Strand Name
chr5_1 gene 61669079 61671281 61669079 ID=Msa0741900;Name=Msa0741900
chr5_1 mRNA 61669079 61671281 61669079 ID=Msa0741900-mRNA-1;Parent=Msa0741900;Name=Msa0741900-mRNA-1;_AED=0.01;_eAED=0.01;_QI=0|1|0.5|1|1|1|2|249|539
chr5_1 exon 61669079 61670218 61669079 ID=Msa0741900-mRNA-1:exon:17885;Parent=Msa0741900-mRNA-1
chr5_1 exon 61670553 61671281 61670553 ID=Msa0741900-mRNA-1:exon:17884;Parent=Msa0741900-mRNA-1
chr5_1 CDS 61670553 61671281 61670553 ID=Msa0741900-mRNA-1:cds;Parent=Msa0741900-mRNA-1
chr5_1 CDS 61669328 61670218 61669328 ID=Msa0741900-mRNA-1:cds;Parent=Msa0741900-mRNA-1
chr5_1 three_prime_UTR 61669079 61669327 61669079 ID=Msa0741900-mRNA-1:three_prime_utr;Parent=Msa0741900-mRNA-1
Gene Sequence

>Msa0741900

ATGATGTTTCCAATGGTTCTTCTAAGGCTTGTAGATTTGGTTTTGTACCAACTACTTGCAAATTCATACTATAGAGCTGCAAGAAAAATGAAAAGTTATGGTTTTAATTTAGCTTATCTTTCATCTAAACCACCTCATCAACCTTGTTCTTTTCCTAGTATAACAAAATGTGATTTACAAGGTAGAATGTCACAAACAATTGTTTGTGACATTCATAGAGTCCTATTAAGGTCTCATTCATTTTTTCCTTATTTCATGCTTGTTGCTTTTGAAGGTGGCAGCATTTTTAGAGCATTTTTCTTGCTTATGTCTTGTCCTTTACTCTTGATTTGTGATCATGAGTTAAAACTAAAGATTATGACTTTTATAACCTTTTGTGGTTTAAGAATAAAGGACATGGAAAATGTTTCAAGGGCTGTTTTACCAAAGTTTTATTTAGAGAATCTTAATCCTCAAGTTTATGAGGTTCTTGCTTCAACTGGGTCAAAAGTTGTTATCACAAGTGTGCCTAGAGTTATGGTAGAAGGATTTTTGAAAGAGTATTTGAGTGTCGGTGATGTTTTAGGCACAGAGTTACACACATTTGGTTGCTACTTCACTGGTTTTCTCACTAGTCCTGGCTTACTTGTTAAGCATAGAGCACTTAAAGAGTATTTTGGTGATAGAAAACCTGATATTGGAATTGGAACTTCAAGTTTACATCATCATCTTTTCATTTCCACTTGCAAGGAAGCTTATGTTGTGAACAATGAAGAAAACAAGAATAGTCCAAACTCAATCATGCCAAGGGACAAATATCCAAAGCCATTAATATTTCATGATGGAAGATTAGCATTCTTGCCAACACCCTTAGCAACACTCTACATGTTCATGTGGCTACCAATTGGAATTATTTTAGCAATTTATAGAATCCTTCTTGGTATTTTCCTTCCTTACAAATTAGCACTTGAATTAGGAGTTTGGAGTGGCATAGATCTAAAAATCAAAGGCACTATCCCTAAAAAAACAAAACCAAACAAAGGTGTTTTGTTTGTATGCACACATAGGACATTGTTGGATCCTGTTTTCTTAAGCACGTCATTAGCAAAACCTTTAACTGCAGTAACATATAGTTTAAGCAAAGTTTCTGAGTTCATAGCACCAATCAAAACAGTGAGATTAACAAGAGACAGAAAACAAGATGGTGAAACAATGCAAAAGTTACTAAGAGAAGGTGATTTAGTTGTTTGTCCTGAAGGAACAACATGTAGAGAACCATATTTGTTAAGGTTTAGTTCATTGTTTGCTGAGTTGGCTAATGAGATAGTGCCTGTGGCAATGAATACTCATGTCAGCATGTTTTATGGGACCACAGCAAGCGGATTGAAGTGTTTGGATCCTATTTTTTTCTTGATGAATCCTAAGCCAAGTTATCATATTCAAATTATTGGGAAGGTACCTAAAGAACTTACATGTGCTGGAGGAAAGTCAAGTGTTGAAGTGGCTAATTATATACAGAAACAATTGGGTGATGCTTTGGGGTTTGAGTGTACAAATTTTACTAGGAGGGATAAGTATATGATGCTTGCAGGGAATGAAGGGATTGTTCAACAAGTTAGTGATTTGAAAAAATGCTCTTGA

Protein sequence

>Msa0741900

MMFPMVLLRLVDLVLYQLLANSYYRAARKMKSYGFNLAYLSSKPPHQPCSFPSITKCDLQGRMSQTIVCDIHRVLLRSHSFFPYFMLVAFEGGSIFRAFFLLMSCPLLLICDHELKLKIMTFITFCGLRIKDMENVSRAVLPKFYLENLNPQVYEVLASTGSKVVITSVPRVMVEGFLKEYLSVGDVLGTELHTFGCYFTGFLTSPGLLVKHRALKEYFGDRKPDIGIGTSSLHHHLFISTCKEAYVVNNEENKNSPNSIMPRDKYPKPLIFHDGRLAFLPTPLATLYMFMWLPIGIILAIYRILLGIFLPYKLALELGVWSGIDLKIKGTIPKKTKPNKGVLFVCTHRTLLDPVFLSTSLAKPLTAVTYSLSKVSEFIAPIKTVRLTRDRKQDGETMQKLLREGDLVVCPEGTTCREPYLLRFSSLFAELANEIVPVAMNTHVSMFYGTTASGLKCLDPIFFLMNPKPSYHIQIIGKVPKELTCAGGKSSVEVANYIQKQLGDALGFECTNFTRRDKYMMLAGNEGIVQQVSDLKKCS*