Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0803600 | XP_003613048.2 | 94.217 | 709 | 28 | 3 | 1 | 700 | 1 | 705 | 0.0 | 1375 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0803600 | sp|Q56X46|MSL2_ARATH | 54.622 | 714 | 255 | 13 | 1 | 700 | 1 | 659 | 0.0 | 731 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0803600 | G7JWE5 | 94.217 | 709 | 28 | 3 | 1 | 700 | 1 | 705 | 0.0 | 1375 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0011410 | Msa0803600 | 0.828267 | 9.887256e-55 | -8.615850e-47 |
| Msa0011440 | Msa0803600 | 0.821933 | 3.102247e-53 | -8.615850e-47 |
| Msa0011450 | Msa0803600 | 0.853113 | 2.960783e-61 | -8.615850e-47 |
| Msa0044530 | Msa0803600 | 0.804858 | 1.764960e-49 | -8.615850e-47 |
| Msa0066890 | Msa0803600 | 0.808132 | 3.599329e-50 | -8.615850e-47 |
| Msa0091240 | Msa0803600 | 0.803599 | 3.228040e-49 | -8.615850e-47 |
| Msa0105140 | Msa0803600 | 0.809709 | 1.655102e-50 | -8.615850e-47 |
| Msa0803600 | Msa0866580 | 0.980384 | 4.282689e-150 | -8.615850e-47 |
| Msa0803600 | Msa1011140 | 0.809711 | 1.653039e-50 | -8.615850e-47 |
| Msa0803600 | Msa1219530 | 0.805526 | 1.279350e-49 | -8.615850e-47 |
| Msa0803600 | Msa1332340 | 0.804180 | 2.444821e-49 | -8.615850e-47 |
| Msa0803600 | Msa1333220 | 0.805107 | 1.566228e-49 | -8.615850e-47 |
| Msa0803600 | Msa1409360 | 0.804783 | 1.830294e-49 | -8.615850e-47 |
| Msa0151380 | Msa0803600 | 0.835713 | 1.429885e-56 | -8.615850e-47 |
| Msa0151510 | Msa0803600 | 0.842215 | 2.962280e-58 | -8.615850e-47 |
| Msa0154890 | Msa0803600 | 0.800442 | 1.438798e-48 | -8.615850e-47 |
| Msa0371290 | Msa0803600 | 0.848769 | 4.961044e-60 | -8.615850e-47 |
| Msa0375930 | Msa0803600 | 0.806077 | 9.801772e-50 | -8.615850e-47 |
| Msa0424570 | Msa0803600 | 0.808587 | 2.878734e-50 | -8.615850e-47 |
| Msa0516000 | Msa0803600 | 0.808155 | 3.558578e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0803600 | MtrunA17_Chr5g0412241 | 94.217 | 709 | 28 | 3 | 1 | 700 | 1 | 705 | 0.0 | 1375 |
| Msa0803600 | MtrunA17_Chr3g0132931 | 54.621 | 725 | 264 | 18 | 1 | 696 | 12 | 700 | 0.0 | 728 |
| Msa0803600 | MtrunA17_Chr3g0132961 | 58.932 | 487 | 181 | 5 | 76 | 550 | 86 | 565 | 0.0 | 587 |
| Msa0803600 | MtrunA17_Chr3g0132941 | 37.017 | 181 | 77 | 6 | 302 | 472 | 133 | 286 | 8.16e-19 | 88.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0803600 | AT5G10490.1 | 54.622 | 714 | 255 | 13 | 1 | 700 | 1 | 659 | 0.0 | 731 |
| Msa0803600 | AT5G10490.3 | 54.391 | 706 | 253 | 13 | 9 | 700 | 7 | 657 | 0.0 | 719 |
| Msa0803600 | AT5G10490.2 | 54.745 | 685 | 241 | 13 | 30 | 700 | 2 | 631 | 0.0 | 707 |
| Msa0803600 | AT1G58200.2 | 54.147 | 639 | 251 | 10 | 48 | 670 | 48 | 660 | 0.0 | 648 |
| Msa0803600 | AT1G58200.1 | 54.147 | 639 | 251 | 10 | 48 | 670 | 48 | 660 | 0.0 | 648 |
Find 190 sgRNAs with CRISPR-Local
Find 554 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTCCTGCTGTGACCCATTTC+TGG | 0.154402 | 5_3:-18845317 | None:intergenic |
| TTCATTGTTTATGGAATTGC+TGG | 0.209952 | 5_3:+18845284 | Msa0803600:CDS |
| CCCTGAAAATCAGGCGCTTA+TGG | 0.229014 | 5_3:+18846112 | Msa0803600:CDS |
| CCCGGTCTTTATTGCTGTTC+AGG | 0.249011 | 5_3:-18841697 | None:intergenic |
| TGGGTCACAGCAGGAGGTTT+TGG | 0.264140 | 5_3:+18845324 | Msa0803600:CDS |
| CTTGAAGAGAATATAGTTCT+AGG | 0.264601 | 5_3:+18848790 | Msa0803600:CDS |
| AAACAGCTTTGCCTGCAAAT+TGG | 0.292527 | 5_3:-18845236 | None:intergenic |
| TTGATTTGATACAATAATAA+TGG | 0.300417 | 5_3:+18841625 | Msa0803600:exon |
| CTGGAGCCGTACTTATTTGC+AGG | 0.302317 | 5_3:+18843073 | Msa0803600:CDS |
| CAGATGGGATTCCAATTTGC+AGG | 0.306719 | 5_3:+18845225 | Msa0803600:intron |
| AGAAATCCATGATAGTAAAT+TGG | 0.317491 | 5_3:-18849180 | None:intergenic |
| ACAACAGGAAACTATACTAT+TGG | 0.323288 | 5_3:+18848114 | Msa0803600:intron |
| CCTGCAACTGTCTCATGGGC+TGG | 0.329194 | 5_3:+18841661 | Msa0803600:CDS |
| TTCACTGTAAATTTGTGGTT+TGG | 0.331136 | 5_3:-18845819 | None:intergenic |
| ACTTCGAACTCCAAAGTAAC+TGG | 0.333268 | 5_3:+18848574 | Msa0803600:CDS |
| AAGCTGTTTATTCTGCAGTA+TGG | 0.334963 | 5_3:+18845250 | Msa0803600:CDS |
| TGAAGAATATTTGTGTGTTA+AGG | 0.336393 | 5_3:+18847223 | Msa0803600:CDS |
| GGTGAATCAATCACTAATAA+TGG | 0.340030 | 5_3:-18848280 | None:intergenic |
| CTCATGGGCTGGGACTTTGC+AGG | 0.348404 | 5_3:+18841672 | Msa0803600:CDS |
| CACGGCAAGATTGAAAATTC+TGG | 0.351780 | 5_3:+18840731 | Msa0803600:five_prime_UTR |
| ACATTCCCATCTGAAGCCTT+TGG | 0.359063 | 5_3:-18848922 | None:intergenic |
| GCGCAGAATTTCGACACTTT+CGG | 0.360962 | 5_3:+18840753 | Msa0803600:five_prime_UTR |
| CACAACAGTCTGTACTCTAT+AGG | 0.361922 | 5_3:-18841564 | None:intergenic |
| TCCTGCTGTGACCCATTTCT+GGG | 0.363829 | 5_3:-18845316 | None:intergenic |
| TCATCTGCATTGTTCTTGTA+AGG | 0.368675 | 5_3:-18848301 | None:intergenic |
| AGAAGCTAGCCAGGCTGTTA+AGG | 0.368941 | 5_3:+18843224 | Msa0803600:CDS |
| TTCGAAGTAGAAGACATTTC+CGG | 0.370534 | 5_3:-18848559 | None:intergenic |
| ATCCATTCATTTACCACAAA+AGG | 0.372902 | 5_3:-18845536 | None:intergenic |
| CAACATAAACCCTGAAAATC+AGG | 0.374249 | 5_3:+18846103 | Msa0803600:CDS |
| GTTCCTCTAACCTTAGTATC+TGG | 0.375006 | 5_3:-18848433 | None:intergenic |
| GCTGCATCCCAGGGTGGAAA+TGG | 0.375974 | 5_3:+18848895 | Msa0803600:CDS |
| CCAGCCCATGAGACAGTTGC+AGG | 0.377482 | 5_3:-18841661 | None:intergenic |
| GGTTCCCTGCAACTGTCTCA+TGG | 0.378252 | 5_3:+18841656 | Msa0803600:CDS |
| CATGGTTTGCAGAGGGTAAA+GGG | 0.378613 | 5_3:+18841796 | Msa0803600:intron |
| ATTTACATCTAAATGACTAA+TGG | 0.383147 | 5_3:-18845895 | None:intergenic |
| GCTTCTGTAGGTAGAATTAC+TGG | 0.386567 | 5_3:-18843207 | None:intergenic |
| ACAACAGTCTGTACTCTATA+GGG | 0.399252 | 5_3:-18841563 | None:intergenic |
| TTTGACATGGATGTCCTTCA+TGG | 0.400435 | 5_3:-18848617 | None:intergenic |
| ATACTGCCAATTTACTATCA+TGG | 0.402919 | 5_3:+18849174 | Msa0803600:three_prime_UTR |
| AAAGGAAATGGCTGCATCCC+AGG | 0.406454 | 5_3:+18848885 | Msa0803600:CDS |
| CAACATTCACTGTAAATTTG+TGG | 0.406561 | 5_3:-18845824 | None:intergenic |
| TCCACTGCAGTTCATGAAAC+AGG | 0.407725 | 5_3:+18842519 | Msa0803600:intron |
| TGGAGATCCATTTCCACCCT+GGG | 0.408019 | 5_3:-18848902 | None:intergenic |
| CTGCAACTGTCTCATGGGCT+GGG | 0.410328 | 5_3:+18841662 | Msa0803600:CDS |
| GAACTCCAAAGTAACTGGTT+TGG | 0.416317 | 5_3:+18848579 | Msa0803600:CDS |
| ACTATATTCTCTTCAAGAAC+AGG | 0.420455 | 5_3:-18848784 | None:intergenic |
| TTAACTAGGTAGTTGTTTGA+AGG | 0.422202 | 5_3:+18848994 | Msa0803600:three_prime_UTR |
| CTGCTATGCAGCATGTTGGC+TGG | 0.422368 | 5_3:+18845748 | Msa0803600:intron |
| TTCTGAGTCGACGTTTGGCT+TGG | 0.422652 | 5_3:-18848668 | None:intergenic |
| TTCCTTGTCTGAAACATCAA+TGG | 0.423767 | 5_3:-18842868 | None:intergenic |
| AACTCAAGAGGCAAAGGAAA+TGG | 0.428446 | 5_3:+18848873 | Msa0803600:CDS |
| TTCTCTTACTAGCCAAGATC+AGG | 0.428796 | 5_3:+18849199 | Msa0803600:three_prime_UTR |
| TACATCCAAACCAGTTACTT+TGG | 0.431492 | 5_3:-18848584 | None:intergenic |
| ATGCCCTTCCTATCCAGTTT+CGG | 0.431692 | 5_3:+18841846 | Msa0803600:CDS |
| ACAATAATAATGGCTCTTCC+TGG | 0.432880 | 5_3:+18841635 | Msa0803600:exon |
| AATTGCGCTTCCTTCTGTTA+AGG | 0.434176 | 5_3:+18842648 | Msa0803600:CDS |
| GAATTTCGACACTTTCGGTT+GGG | 0.434680 | 5_3:+18840758 | Msa0803600:five_prime_UTR |
| GGAATCAACTTTACAATGAC+TGG | 0.435897 | 5_3:-18842805 | None:intergenic |
| TTGCAAGCCGGGCCCGGTGA+TGG | 0.436371 | 5_3:-18848156 | None:intergenic |
| ACGGACTGGTGTTGCAAGCC+GGG | 0.443801 | 5_3:-18848167 | None:intergenic |
| AACACCTCCATCATATAAAC+AGG | 0.444100 | 5_3:+18842557 | Msa0803600:CDS |
| TATATACAGCTTCTCAATGA+TGG | 0.449718 | 5_3:-18849065 | None:intergenic |
| TCTTCACCTCGTATAATTGT+TGG | 0.451139 | 5_3:-18845777 | None:intergenic |
| TATTATTGTATCAAATCAAA+TGG | 0.452211 | 5_3:-18841621 | None:intergenic |
| GTGTCGATCTCATCATTGAT+AGG | 0.453284 | 5_3:-18848844 | None:intergenic |
| GTTCCCTGCAACTGTCTCAT+GGG | 0.456123 | 5_3:+18841657 | Msa0803600:CDS |
| TCATGGTTTGCAGAGGGTAA+AGG | 0.457739 | 5_3:+18841795 | Msa0803600:intron |
| TACGGACTGGTGTTGCAAGC+CGG | 0.459422 | 5_3:-18848168 | None:intergenic |
| AGAGTTAGATGCCATGACTT+TGG | 0.460895 | 5_3:-18848479 | None:intergenic |
| AGAACAGGCCTGGGTGCAGC+AGG | 0.461011 | 5_3:-18848769 | None:intergenic |
| CATGAATCATTGCGCTTGAA+AGG | 0.462593 | 5_3:-18845505 | None:intergenic |
| CTGGTGTTGCAAGCCGGGCC+CGG | 0.463501 | 5_3:-18848162 | None:intergenic |
| TGCAGAAGAGTGATAATAGT+TGG | 0.463555 | 5_3:+18842992 | Msa0803600:intron |
| GGCATACCTTGATAAACAAT+AGG | 0.464220 | 5_3:-18843295 | None:intergenic |
| ATTCTCTTCAAGAACAGGCC+TGG | 0.464804 | 5_3:-18848779 | None:intergenic |
| AGAATTTCGACACTTTCGGT+TGG | 0.465603 | 5_3:+18840757 | Msa0803600:five_prime_UTR |
| TTCTCTTCAAGAACAGGCCT+GGG | 0.467602 | 5_3:-18848778 | None:intergenic |
| TCTACCTACAGAAGCTAGCC+AGG | 0.470503 | 5_3:+18843215 | Msa0803600:CDS |
| TTGTTTAAATTTGATTTCAG+TGG | 0.471535 | 5_3:-18848520 | None:intergenic |
| CAAGGCAAACGTGGAGGTGC+CGG | 0.471773 | 5_3:+18848540 | Msa0803600:CDS |
| AATAATGGACGGTTAGATAC+TGG | 0.471945 | 5_3:-18848265 | None:intergenic |
| TCAAAATCTGCAATACTACT+TGG | 0.473494 | 5_3:+18841598 | Msa0803600:five_prime_UTR |
| GCACCAGATACTAAGGTTAG+AGG | 0.473803 | 5_3:+18848430 | Msa0803600:CDS |
| GTTCTAGGTGTTGCATTGGA+TGG | 0.475070 | 5_3:+18848805 | Msa0803600:CDS |
| CAATCTTGCCGTGTCAGCCA+TGG | 0.475221 | 5_3:-18840721 | None:intergenic |
| TTGAGCAGCAGAGGTTGCAC+AGG | 0.475903 | 5_3:+18846066 | Msa0803600:CDS |
| TTGGAGATCCATTTCCACCC+TGG | 0.477458 | 5_3:-18848903 | None:intergenic |
| TCAGCAGTGTACTTAAAAGT+TGG | 0.478903 | 5_3:-18849026 | None:intergenic |
| GATTCCACATTCAATGGTGC+TGG | 0.479877 | 5_3:+18848241 | Msa0803600:CDS |
| TTATCAGCCATCACCGGGCC+CGG | 0.485518 | 5_3:+18848149 | Msa0803600:CDS |
| GGAAGCGCAATTCGTTCGCC+TGG | 0.491141 | 5_3:-18842637 | None:intergenic |
| CAACAAAACAGCAAGGAGAA+AGG | 0.493006 | 5_3:+18848743 | Msa0803600:CDS |
| TATTAATTGATTATTGATTG+TGG | 0.495435 | 5_3:-18840782 | None:intergenic |
| AGTTCATGAAACAGGACTAC+AGG | 0.497346 | 5_3:+18842527 | Msa0803600:intron |
| GTCAGTGCTGTTTGTTGATG+AGG | 0.497401 | 5_3:-18848701 | None:intergenic |
| TCATTGTTTATGGAATTGCT+GGG | 0.497570 | 5_3:+18845285 | Msa0803600:CDS |
| TCCTTGTCTGAAACATCAAT+GGG | 0.500430 | 5_3:-18842867 | None:intergenic |
| TTAGAGTTATCAGCCATCAC+CGG | 0.505279 | 5_3:+18848143 | Msa0803600:CDS |
| TGATACTAAGACAGATGATA+AGG | 0.506673 | 5_3:+18848393 | Msa0803600:CDS |
| ATTGAAGGATATGAGGTGTC+TGG | 0.508645 | 5_3:+18845569 | Msa0803600:CDS |
| TTAGTATCTGGTGCTCCGAT+TGG | 0.509276 | 5_3:-18848421 | None:intergenic |
| TATAGTTCTAGGTGTTGCAT+TGG | 0.512352 | 5_3:+18848801 | Msa0803600:CDS |
| AACGAAGATTGAAGGATATG+AGG | 0.513606 | 5_3:+18845562 | Msa0803600:CDS |
| TGGATTCAAACGAAGATTGA+AGG | 0.514774 | 5_3:+18845554 | Msa0803600:CDS |
| TACGCAGATTCCACATTCAA+TGG | 0.517140 | 5_3:+18848235 | Msa0803600:CDS |
| TGAGACAGTTGCAGGGAACC+AGG | 0.519352 | 5_3:-18841653 | None:intergenic |
| GATGATAAGGTTGAACCAAT+CGG | 0.521027 | 5_3:+18848406 | Msa0803600:CDS |
| ACCCAGAAATGGGTCACAGC+AGG | 0.524431 | 5_3:+18845315 | Msa0803600:CDS |
| ACCTGAACAGCAATAAAGAC+CGG | 0.528072 | 5_3:+18841696 | Msa0803600:CDS |
| AATATATGCTGATGCCGACT+TGG | 0.529619 | 5_3:+18848201 | Msa0803600:CDS |
| AGTTATCAGTGAGTTTAACT+AGG | 0.534077 | 5_3:+18848980 | Msa0803600:three_prime_UTR |
| GGATCTCCAAAGGCTTCAGA+TGG | 0.535083 | 5_3:+18848916 | Msa0803600:CDS |
| TAGAGTTATCAGCCATCACC+GGG | 0.538032 | 5_3:+18848144 | Msa0803600:CDS |
| GCGTTGACCTGTTTATATGA+TGG | 0.539034 | 5_3:-18842564 | None:intergenic |
| AAAGTCGTTCCTTAACAGCC+TGG | 0.540283 | 5_3:-18843233 | None:intergenic |
| TGCTGACATGCGGAAAGTAT+TGG | 0.540499 | 5_3:+18846028 | Msa0803600:CDS |
| TGCGCTTCCTTCTGTTAAGG+TGG | 0.542081 | 5_3:+18842651 | Msa0803600:CDS |
| CATACCGAAACTGGATAGGA+AGG | 0.542460 | 5_3:-18841850 | None:intergenic |
| TAAATGACTAATGGCTAGGT+GGG | 0.548938 | 5_3:-18845886 | None:intergenic |
| AATCGGAGCACCAGATACTA+AGG | 0.549308 | 5_3:+18848423 | Msa0803600:CDS |
| ACCTTCGACCACTACTGTTG+TGG | 0.550457 | 5_3:+18843049 | Msa0803600:CDS |
| TAAATCATTGTCGACTGTAG+TGG | 0.552113 | 5_3:+18843266 | Msa0803600:CDS |
| AACTCAAGATGAATCTGAAG+TGG | 0.554331 | 5_3:+18848453 | Msa0803600:CDS |
| AATCAAATCCATGGCTGACA+CGG | 0.554843 | 5_3:+18840713 | Msa0803600:five_prime_UTR |
| TGTAGATAATTCAACCATGA+AGG | 0.555353 | 5_3:+18848603 | Msa0803600:CDS |
| AACCTCTGCTGCTCAACTTG+AGG | 0.556309 | 5_3:-18846059 | None:intergenic |
| CATCCATGTCAAACAATCCA+AGG | 0.556452 | 5_3:+18848627 | Msa0803600:CDS |
| GCCCATTGATGTTTCAGACA+AGG | 0.557479 | 5_3:+18842866 | Msa0803600:CDS |
| ATCCTCAAGTTGAGCAGCAG+AGG | 0.557486 | 5_3:+18846057 | Msa0803600:CDS |
| CATCTAAATGACTAATGGCT+AGG | 0.558832 | 5_3:-18845890 | None:intergenic |
| GTGAAACCTGCAAATAAGTA+CGG | 0.563725 | 5_3:-18843079 | None:intergenic |
| AGAACATACCGAAACTGGAT+AGG | 0.565614 | 5_3:-18841854 | None:intergenic |
| GACCCTTGGATTGTTTGACA+TGG | 0.566336 | 5_3:-18848630 | None:intergenic |
| CGACCACTACTGTTGTGGAC+TGG | 0.567856 | 5_3:+18843054 | Msa0803600:CDS |
| GTAAAGTTGATTCCCGCCGT+TGG | 0.568974 | 5_3:+18842814 | Msa0803600:CDS |
| GTGAATTAATTCATATACGA+GGG | 0.571486 | 5_3:-18849113 | None:intergenic |
| GTTCATGAAACAGGACTACA+GGG | 0.577067 | 5_3:+18842528 | Msa0803600:intron |
| CTAAATGACTAATGGCTAGG+TGG | 0.579708 | 5_3:-18845887 | None:intergenic |
| AAGGAAATGGCTGCATCCCA+GGG | 0.591945 | 5_3:+18848886 | Msa0803600:CDS |
| TTTCCTGCTATGCAGCATGT+TGG | 0.592657 | 5_3:+18845744 | Msa0803600:intron |
| CTATGCAGCATGTTGGCTGG+TGG | 0.593054 | 5_3:+18845751 | Msa0803600:intron |
| GTTGACTCTTGCTGGTCGTG+AGG | 0.596075 | 5_3:+18845356 | Msa0803600:CDS |
| TGGTCCAGCACCATTGAATG+TGG | 0.597823 | 5_3:-18848245 | None:intergenic |
| AGATGACAAGACAACTGTGC+GGG | 0.598292 | 5_3:+18848363 | Msa0803600:CDS |
| ACACGTGGAAATCAAATCCA+TGG | 0.602278 | 5_3:+18840704 | Msa0803600:five_prime_UTR |
| ACTTTATCAATCTTTCAACT+CGG | 0.604859 | 5_3:-18841522 | None:intergenic |
| TGAAGTGGATGCCAAAGTCA+TGG | 0.606315 | 5_3:+18848468 | Msa0803600:CDS |
| AAAGGAAACCTGCTGCACCC+AGG | 0.609838 | 5_3:+18848761 | Msa0803600:CDS |
| CAGAAATGGGTCACAGCAGG+AGG | 0.610702 | 5_3:+18845318 | Msa0803600:CDS |
| GTAGTAGCCACCTTAACAGA+AGG | 0.612590 | 5_3:-18842658 | None:intergenic |
| CGACACTGTGACAACTCAAG+AGG | 0.612765 | 5_3:+18848861 | Msa0803600:CDS |
| CAAATATTCTTCAAAATGTG+AGG | 0.613476 | 5_3:-18847213 | None:intergenic |
| GGGTGGAAATGGATCTCCAA+AGG | 0.613690 | 5_3:+18848906 | Msa0803600:CDS |
| ACAGCCTGGCTAGCTTCTGT+AGG | 0.614293 | 5_3:-18843219 | None:intergenic |
| TGTGACAACTCAAGAGGCAA+AGG | 0.614507 | 5_3:+18848867 | Msa0803600:CDS |
| AAAATGATAATGCCAACGGC+GGG | 0.615340 | 5_3:-18842826 | None:intergenic |
| TTTGTGACCTAACTCAACAA+TGG | 0.618240 | 5_3:-18840899 | None:intergenic |
| AACAGCACTGACAAAACCAA+TGG | 0.619573 | 5_3:+18848712 | Msa0803600:CDS |
| CCTGAACAGCAATAAAGACC+GGG | 0.619667 | 5_3:+18841697 | Msa0803600:CDS |
| TGATAAAATGAAAAGTCGAT+CGG | 0.619705 | 5_3:+18848321 | Msa0803600:CDS |
| AATTTACAGTGAATGTTGTG+CGG | 0.627582 | 5_3:+18845829 | Msa0803600:CDS |
| ATGGTTTGCAGAGGGTAAAG+GGG | 0.628389 | 5_3:+18841797 | Msa0803600:intron |
| GATCTCCAAAGGCTTCAGAT+GGG | 0.629921 | 5_3:+18848917 | Msa0803600:CDS |
| AAGATTGTAGATGCTACAAG+AGG | 0.630653 | 5_3:+18848950 | Msa0803600:exon |
| AATCAATCACTAATAATGGA+CGG | 0.634189 | 5_3:-18848276 | None:intergenic |
| GCTCCAGTCCACAACAGTAG+TGG | 0.636987 | 5_3:-18843057 | None:intergenic |
| TTGACCTGTTTATATGATGG+AGG | 0.637854 | 5_3:-18842561 | None:intergenic |
| ATGGCATCTAACTCTGATGT+TGG | 0.638476 | 5_3:+18848487 | Msa0803600:CDS |
| TCCACAACAGTAGTGGTCGA+AGG | 0.642801 | 5_3:-18843050 | None:intergenic |
| TGAAGTTACTATGTAATGAG+TGG | 0.643990 | 5_3:-18843025 | None:intergenic |
| ATCCATGTCAAACAATCCAA+GGG | 0.645943 | 5_3:+18848628 | Msa0803600:CDS |
| AAATTTAAACAAGGCAAACG+TGG | 0.647403 | 5_3:+18848531 | Msa0803600:CDS |
| TTGAATGTGGAATCTGCGTA+TGG | 0.650833 | 5_3:-18848232 | None:intergenic |
| GTATGGTATGTTGTCCAAGT+CGG | 0.651077 | 5_3:-18848215 | None:intergenic |
| CAGCCCATGAGACAGTTGCA+GGG | 0.673799 | 5_3:-18841660 | None:intergenic |
| TGAATTAATTCATATACGAG+GGG | 0.674455 | 5_3:-18849112 | None:intergenic |
| TGAGGTGTCTGGCACTGTTG+AGG | 0.674638 | 5_3:+18845580 | Msa0803600:CDS |
| ATACCGAAACTGGATAGGAA+GGG | 0.676356 | 5_3:-18841849 | None:intergenic |
| AGTGAATTAATTCATATACG+AGG | 0.679712 | 5_3:-18849114 | None:intergenic |
| TTTGTCTATCTGCTTCTACG+AGG | 0.681568 | 5_3:-18840873 | None:intergenic |
| ACTGAAATCAAATTTAAACA+AGG | 0.682136 | 5_3:+18848522 | Msa0803600:CDS |
| AGAACATTGTTGCTGACATG+CGG | 0.687401 | 5_3:+18846018 | Msa0803600:intron |
| AATATGCCAACAAAACAGCA+AGG | 0.689521 | 5_3:+18848736 | Msa0803600:CDS |
| TTTAAACAAGGCAAACGTGG+AGG | 0.690639 | 5_3:+18848534 | Msa0803600:CDS |
| TGGCTACTACAGTACTGACA+AGG | 0.701942 | 5_3:+18842671 | Msa0803600:CDS |
| GAACGTTTGAAGTAGACACG+TGG | 0.721212 | 5_3:+18840689 | None:intergenic |
| GAAATGGCTGCATCCCAGGG+TGG | 0.725308 | 5_3:+18848889 | Msa0803600:CDS |
| TGGTCACCAACAATTATACG+AGG | 0.753319 | 5_3:+18845771 | Msa0803600:CDS |
| AAGATGACAAGACAACTGTG+CGG | 0.761123 | 5_3:+18848362 | Msa0803600:CDS |
| TTCATGAAACAGGACTACAG+GGG | 0.786260 | 5_3:+18842529 | Msa0803600:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTAAAAATAATAGACAAT+CGG | - | chr5_3:18843438-18843457 | None:intergenic | 10.0% |
| !! | AACAATATCAATTAATATAT+GGG | - | chr5_3:18844538-18844557 | None:intergenic | 10.0% |
| !! | AAACAATATCAATTAATATA+TGG | - | chr5_3:18844539-18844558 | None:intergenic | 10.0% |
| !! | AAAATATCATAAAACAATAT+TGG | - | chr5_3:18845968-18845987 | None:intergenic | 10.0% |
| !!! | ATTACTTCTTTATTTTTATA+AGG | - | chr5_3:18846870-18846889 | None:intergenic | 10.0% |
| !! | AAAAAAGAATAAAATAAGTT+TGG | + | chr5_3:18849228-18849247 | Msa0803600:three_prime_UTR | 10.0% |
| !!! | TATTAATTGATTATTGATTG+TGG | - | chr5_3:18840785-18840804 | None:intergenic | 15.0% |
| !! | TATTATTGTATCAAATCAAA+TGG | - | chr5_3:18841624-18841643 | None:intergenic | 15.0% |
| !!! | TTGATTTGATACAATAATAA+TGG | + | chr5_3:18841625-18841644 | Msa0803600:exon | 15.0% |
| !! | TTCTTAAAAACATTAAGATA+TGG | + | chr5_3:18841873-18841892 | Msa0803600:intron | 15.0% |
| !! | ATTCAAATTTCAAAGAAAAT+GGG | - | chr5_3:18841977-18841996 | None:intergenic | 15.0% |
| !! | AATTCAAATTTCAAAGAAAA+TGG | - | chr5_3:18841978-18841997 | None:intergenic | 15.0% |
| !!! | TACTATTCAATTTTGATTAT+TGG | + | chr5_3:18842088-18842107 | Msa0803600:intron | 15.0% |
| !! | ACTGATGTTATATATATAAA+AGG | + | chr5_3:18843740-18843759 | Msa0803600:intron | 15.0% |
| !! | CTGATGTTATATATATAAAA+GGG | + | chr5_3:18843741-18843760 | Msa0803600:intron | 15.0% |
| !! | TGATGTTATATATATAAAAG+GGG | + | chr5_3:18843742-18843761 | Msa0803600:intron | 15.0% |
| !!! | TTTTTACTTAAAATCAATAC+CGG | - | chr5_3:18844615-18844634 | None:intergenic | 15.0% |
| !! | TTTCTTAATAATGTAAGTAA+TGG | - | chr5_3:18844797-18844816 | None:intergenic | 15.0% |
| !! | GTACAAATTATCAATTTATT+TGG | - | chr5_3:18846831-18846850 | None:intergenic | 15.0% |
| !!! | AATGATCAAATATATTTTGT+AGG | - | chr5_3:18847432-18847451 | None:intergenic | 15.0% |
| !! | TATATTTCTTAACTACCAAA+TGG | - | chr5_3:18841108-18841127 | None:intergenic | 20.0% |
| !!! | ATTTGGTAGTTAAGAAATAT+AGG | + | chr5_3:18841107-18841126 | Msa0803600:intron | 20.0% |
| !!! | TTTGGTAGTTAAGAAATATA+GGG | + | chr5_3:18841108-18841127 | Msa0803600:intron | 20.0% |
| !! | TTGTAGATAGTAAAAAATAG+CGG | + | chr5_3:18841221-18841240 | Msa0803600:intron | 20.0% |
| !! | TTTAACAATACTAGACTATT+CGG | + | chr5_3:18841351-18841370 | Msa0803600:intron | 20.0% |
| !! | ACTTATATATTGTTAGTGAT+TGG | + | chr5_3:18842415-18842434 | Msa0803600:intron | 20.0% |
| !! | CAATTTCTTTAATCTAGAAA+AGG | - | chr5_3:18842455-18842474 | None:intergenic | 20.0% |
| !!! | TAACCATTAATTTGATCTAA+TGG | - | chr5_3:18844458-18844477 | None:intergenic | 20.0% |
| !! | AGATTAGAAGAAATCTTAAT+GGG | - | chr5_3:18843976-18843995 | None:intergenic | 20.0% |
| !! | TCCTAAATTATGTTGAAAAA+TGG | + | chr5_3:18844077-18844096 | Msa0803600:intron | 20.0% |
| !!! | TCCATTTTTCAACATAATTT+AGG | - | chr5_3:18844081-18844100 | None:intergenic | 20.0% |
| !!! | ACGCTTTTAAAAAATATTGA+AGG | + | chr5_3:18844353-18844372 | Msa0803600:intron | 20.0% |
| !!! | CGCTTTTAAAAAATATTGAA+GGG | + | chr5_3:18844354-18844373 | Msa0803600:intron | 20.0% |
| !! | ATTAGATCAAATTAATGGTT+AGG | - | chr5_3:18843820-18843839 | None:intergenic | 20.0% |
| !!! | TAACCATTAATTTGATCTAA+TGG | + | chr5_3:18844458-18844477 | Msa0803600:intron | 20.0% |
| !! | ATTAATTGATATTGTTTAGC+TGG | + | chr5_3:18844542-18844561 | Msa0803600:intron | 20.0% |
| !!! | TTTTACTTAAAATCAATACC+GGG | - | chr5_3:18844614-18844633 | None:intergenic | 20.0% |
| !! | TTAACTAAGAGTCTTAATTA+GGG | + | chr5_3:18844828-18844847 | Msa0803600:intron | 20.0% |
| !!! | TGAGCAAAAATAATTCATTT+TGG | + | chr5_3:18845029-18845048 | Msa0803600:intron | 20.0% |
| !!! | TCCTTTTAATTATTGAATGT+TGG | + | chr5_3:18845616-18845635 | Msa0803600:intron | 20.0% |
| !! | TCCAACATTCAATAATTAAA+AGG | - | chr5_3:18845620-18845639 | None:intergenic | 20.0% |
| !! | ATTTACATCTAAATGACTAA+TGG | - | chr5_3:18845898-18845917 | None:intergenic | 20.0% |
| !!! | TTTTTCCTCTGTATTTTTTA+TGG | - | chr5_3:18846259-18846278 | None:intergenic | 20.0% |
| !!! | AATTTTTCCTCTATATATCT+AGG | - | chr5_3:18846401-18846420 | None:intergenic | 20.0% |
| !!! | TACACGTTAAAATGTTATTT+AGG | - | chr5_3:18846596-18846615 | None:intergenic | 20.0% |
| !! | GAACATATAATAAATGCAAA+GGG | - | chr5_3:18847709-18847728 | None:intergenic | 20.0% |
| !! | TGAACATATAATAAATGCAA+AGG | - | chr5_3:18847710-18847729 | None:intergenic | 20.0% |
| !! | ATTTATTATATGTTCAATCC+TGG | + | chr5_3:18847714-18847733 | Msa0803600:intron | 20.0% |
| !! | TTTATTATATGTTCAATCCT+GGG | + | chr5_3:18847715-18847734 | Msa0803600:intron | 20.0% |
| !! | TTTAGATGTAATTCATTTGA+CGG | + | chr5_3:18847776-18847795 | Msa0803600:intron | 20.0% |
| !!! | TTGTTTAAATTTGATTTCAG+TGG | - | chr5_3:18848523-18848542 | None:intergenic | 20.0% |
| !! | ACTGAAATCAAATTTAAACA+AGG | + | chr5_3:18848522-18848541 | Msa0803600:CDS | 20.0% |
| ! | AGTCTAGTATTGTTAAATAG+CGG | - | chr5_3:18841348-18841367 | None:intergenic | 25.0% |
| ! | ACTTTATCAATCTTTCAACT+CGG | - | chr5_3:18841525-18841544 | None:intergenic | 25.0% |
| ! | AATTTGAATTATAGACTTCG+TGG | + | chr5_3:18841988-18842007 | Msa0803600:intron | 25.0% |
| ! | ATCAAAATTGAATAGTACCA+AGG | - | chr5_3:18842085-18842104 | None:intergenic | 25.0% |
| !! | TGAAATTTTATGCTAGTGAT+GGG | - | chr5_3:18842265-18842284 | None:intergenic | 25.0% |
| !! | ATGAAATTTTATGCTAGTGA+TGG | - | chr5_3:18842266-18842285 | None:intergenic | 25.0% |
| ! | TTGTAAACCTGATTTAATGA+TGG | + | chr5_3:18842379-18842398 | Msa0803600:intron | 25.0% |
| !!! | CATTATCATTTTTGCAGTAT+GGG | + | chr5_3:18842837-18842856 | Msa0803600:CDS | 25.0% |
| !!! | ATTATCATTTTTGCAGTATG+GGG | + | chr5_3:18842838-18842857 | Msa0803600:CDS | 25.0% |
| !!! | TTTTCAGGTTATTTAGCAAT+CGG | + | chr5_3:18842897-18842916 | Msa0803600:intron | 25.0% |
| ! | GTTCAAATTGATGAATTGTT+TGG | + | chr5_3:18843342-18843361 | Msa0803600:intron | 25.0% |
| ! | CCTAGTTAATTAAGCTATTT+CGG | + | chr5_3:18843380-18843399 | Msa0803600:intron | 25.0% |
| !! | CTAGTTAATTAAGCTATTTC+GGG | + | chr5_3:18843381-18843400 | Msa0803600:intron | 25.0% |
| ! | AAATAATAGACAATCGGATA+AGG | - | chr5_3:18843432-18843451 | None:intergenic | 25.0% |
| ! | GCAGTTAGACAAAAAAAAAT+AGG | - | chr5_3:18843470-18843489 | None:intergenic | 25.0% |
| ! | TAGCCATTAGATCAAATTAA+TGG | + | chr5_3:18843815-18843834 | Msa0803600:intron | 25.0% |
| !! | TACTGAAGATGGTAAATTTT+GGG | - | chr5_3:18843943-18843962 | None:intergenic | 25.0% |
| !! | TTACTGAAGATGGTAAATTT+TGG | - | chr5_3:18843944-18843963 | None:intergenic | 25.0% |
| ! | GAGATTAGAAGAAATCTTAA+TGG | - | chr5_3:18843977-18843996 | None:intergenic | 25.0% |
| ! | ATAATTAGTCAAATGGAGAA+AGG | - | chr5_3:18844005-18844024 | None:intergenic | 25.0% |
| !!! | ACTTGATTGCTACTTTTTTT+TGG | - | chr5_3:18844304-18844323 | None:intergenic | 25.0% |
| ! | AAGCCATTAGATCAAATTAA+TGG | - | chr5_3:18844464-18844483 | None:intergenic | 25.0% |
| ! | TAAAAGTTGTGCAATATAGT+TGG | + | chr5_3:18844568-18844587 | Msa0803600:intron | 25.0% |
| ! | CATTATATGCATGTAATTTC+AGG | - | chr5_3:18844706-18844725 | None:intergenic | 25.0% |
| !!! | TTCAATGTCCTTTTTTTCTA+TGG | + | chr5_3:18844738-18844757 | Msa0803600:intron | 25.0% |
| !! | AACTTGTTCCATAGAAAAAA+AGG | - | chr5_3:18844749-18844768 | None:intergenic | 25.0% |
| ! | GTTAACTAAGAGTCTTAATT+AGG | + | chr5_3:18844827-18844846 | Msa0803600:intron | 25.0% |
| !!! | AAGTAATGGTGTTTTTGTTT+AGG | + | chr5_3:18844889-18844908 | Msa0803600:intron | 25.0% |
| ! | CAATCAAGTCATATTAATCT+TGG | - | chr5_3:18844927-18844946 | None:intergenic | 25.0% |
| !!! | TTATTTTTGCTCATATACCT+GGG | - | chr5_3:18845022-18845041 | None:intergenic | 25.0% |
| !!! | ATTATTTTTGCTCATATACC+TGG | - | chr5_3:18845023-18845042 | None:intergenic | 25.0% |
| ! | AGATAACAATTGTAGAAACA+TGG | + | chr5_3:18845117-18845136 | Msa0803600:intron | 25.0% |
| !!! | AATTATCTGTTTTTGTCAGA+TGG | + | chr5_3:18845209-18845228 | Msa0803600:intron | 25.0% |
| !!! | ATTATCTGTTTTTGTCAGAT+GGG | + | chr5_3:18845210-18845229 | Msa0803600:intron | 25.0% |
| ! | TTGTAAAGTACAACAGAATT+GGG | - | chr5_3:18845410-18845429 | None:intergenic | 25.0% |
| ! | ATTGTAAAGTACAACAGAAT+TGG | - | chr5_3:18845411-18845430 | None:intergenic | 25.0% |
| !! | ATATTTTTCCCAATGACAAA+TGG | + | chr5_3:18845981-18846000 | Msa0803600:intron | 25.0% |
| ! | AACATATCCTAGATATATAG+AGG | + | chr5_3:18846391-18846410 | Msa0803600:intron | 25.0% |
| !! | TAGCACATTGATGATAATAT+GGG | - | chr5_3:18847108-18847127 | None:intergenic | 25.0% |
| !! | ATAGCACATTGATGATAATA+TGG | - | chr5_3:18847109-18847128 | None:intergenic | 25.0% |
| ! | CAAATATTCTTCAAAATGTG+AGG | - | chr5_3:18847216-18847235 | None:intergenic | 25.0% |
| ! | TGAAGAATATTTGTGTGTTA+AGG | + | chr5_3:18847223-18847242 | Msa0803600:CDS | 25.0% |
| ! | GTAAGAATACTTCTTATCTA+TGG | + | chr5_3:18847245-18847264 | Msa0803600:intron | 25.0% |
| !! | TTCTACTGATTAATACTAGA+CGG | - | chr5_3:18847555-18847574 | None:intergenic | 25.0% |
| ! | TAGTATTAATCAGTAGAAGA+TGG | + | chr5_3:18847557-18847576 | Msa0803600:intron | 25.0% |
| !! | ATCAATGACTGCAATTTTAT+GGG | - | chr5_3:18847663-18847682 | None:intergenic | 25.0% |
| ! | ATATAATAAATGCAAAGGGT+TGG | - | chr5_3:18847705-18847724 | None:intergenic | 25.0% |
| ! | TGTTGTTAAAATCCAATAGA+TGG | - | chr5_3:18848100-18848119 | None:intergenic | 25.0% |
| !!! | ATCTATTGGATTTTAACAAC+AGG | + | chr5_3:18848099-18848118 | Msa0803600:intron | 25.0% |
| !! | AATCAATCACTAATAATGGA+CGG | - | chr5_3:18848279-18848298 | None:intergenic | 25.0% |
| ! | TGATAAAATGAAAAGTCGAT+CGG | + | chr5_3:18848321-18848340 | Msa0803600:CDS | 25.0% |
| ! | TGAATTAATTCATATACGAG+GGG | - | chr5_3:18849115-18849134 | None:intergenic | 25.0% |
| ! | GTGAATTAATTCATATACGA+GGG | - | chr5_3:18849116-18849135 | None:intergenic | 25.0% |
| ! | AGTGAATTAATTCATATACG+AGG | - | chr5_3:18849117-18849136 | None:intergenic | 25.0% |
| ! | AGAAATCCATGATAGTAAAT+TGG | - | chr5_3:18849183-18849202 | None:intergenic | 25.0% |
| CAAAAATCCATTGTTGAGTT+AGG | + | chr5_3:18840892-18840911 | Msa0803600:five_prime_UTR | 30.0% | |
| ATAACGAATGTGACATGAAT+TGG | - | chr5_3:18841011-18841030 | None:intergenic | 30.0% | |
| ! | GTTGATGAAATTGTTCCATT+TGG | + | chr5_3:18841090-18841109 | Msa0803600:intron | 30.0% |
| TCAAAATCTGCAATACTACT+TGG | + | chr5_3:18841598-18841617 | Msa0803600:five_prime_UTR | 30.0% | |
| !!! | CACTTTTTTTTACCACTTCA+TGG | + | chr5_3:18841778-18841797 | Msa0803600:intron | 30.0% |
| !! | TTTTAAGAACATACCGAAAC+TGG | - | chr5_3:18841862-18841881 | None:intergenic | 30.0% |
| CTGTTAATTCAACGTGTAAT+TGG | + | chr5_3:18841908-18841927 | Msa0803600:intron | 30.0% | |
| !!! | CTTCGTGGTACTTTTTTTAT+AGG | + | chr5_3:18842003-18842022 | Msa0803600:intron | 30.0% |
| ! | AGTTTTCAGTTTTCAAAGTC+TGG | + | chr5_3:18842056-18842075 | Msa0803600:intron | 30.0% |
| ATGTGCAGCTGATATAATAT+TGG | + | chr5_3:18842178-18842197 | Msa0803600:intron | 30.0% | |
| TGTGCAGCTGATATAATATT+GGG | + | chr5_3:18842179-18842198 | Msa0803600:intron | 30.0% | |
| CCTGACAATATTATAGATAC+TGG | - | chr5_3:18842338-18842357 | None:intergenic | 30.0% | |
| CCAGTATCTATAATATTGTC+AGG | + | chr5_3:18842335-18842354 | Msa0803600:intron | 30.0% | |
| CATTCAACCATCATTAAATC+AGG | - | chr5_3:18842389-18842408 | None:intergenic | 30.0% | |
| ! | TGCAAAAATGATAATGCCAA+CGG | - | chr5_3:18842833-18842852 | None:intergenic | 30.0% |
| !! | GCATTATCATTTTTGCAGTA+TGG | + | chr5_3:18842836-18842855 | Msa0803600:CDS | 30.0% |
| TGAAGTTACTATGTAATGAG+TGG | - | chr5_3:18843028-18843047 | None:intergenic | 30.0% | |
| ! | CTTTTGCCTATTGTTTATCA+AGG | + | chr5_3:18843289-18843308 | Msa0803600:CDS | 30.0% |
| !! | TATTCTGAAGTTAAGGAAAC+AGG | - | chr5_3:18843319-18843338 | None:intergenic | 30.0% |
| !! | GAACAGATATTCTGAAGTTA+AGG | - | chr5_3:18843326-18843345 | None:intergenic | 30.0% |
| CCGAAATAGCTTAATTAACT+AGG | - | chr5_3:18843383-18843402 | None:intergenic | 30.0% | |
| GCTACAATAATGATGTATCT+TGG | - | chr5_3:18843535-18843554 | None:intergenic | 30.0% | |
| AAATTGGATCCAAAGATTTG+GGG | - | chr5_3:18843573-18843592 | None:intergenic | 30.0% | |
| CAAATTGGATCCAAAGATTT+GGG | - | chr5_3:18843574-18843593 | None:intergenic | 30.0% | |
| ! | AGCACACAACAATTAGTTTA+CGG | - | chr5_3:18843619-18843638 | None:intergenic | 30.0% |
| ! | GGTACCTTTTCTATATGTTA+AGG | + | chr5_3:18843715-18843734 | Msa0803600:intron | 30.0% |
| GTTGCCTTAACATATAGAAA+AGG | - | chr5_3:18843722-18843741 | None:intergenic | 30.0% | |
| AAGAGTAGTTAAAATGAGAG+AGG | + | chr5_3:18843778-18843797 | Msa0803600:intron | 30.0% | |
| CACAGTCATAATTAGTCAAA+TGG | - | chr5_3:18844012-18844031 | None:intergenic | 30.0% | |
| ! | TAATGGACACAAGGAAAAAA+GGG | - | chr5_3:18844115-18844134 | None:intergenic | 30.0% |
| ! | TTAATGGACACAAGGAAAAA+AGG | - | chr5_3:18844116-18844135 | None:intergenic | 30.0% |
| CGGATTATATGTACGATTAA+TGG | - | chr5_3:18844132-18844151 | None:intergenic | 30.0% | |
| !! | TTCAATCACACATTTGTTGT+CGG | + | chr5_3:18844182-18844201 | Msa0803600:intron | 30.0% |
| AATGCGAGGAAAAAAATCAT+AGG | + | chr5_3:18844382-18844401 | Msa0803600:intron | 30.0% | |
| TAGTTAAAATGAGAGATGAG+AGG | - | chr5_3:18844496-18844515 | None:intergenic | 30.0% | |
| !!! | TTTTGGCTTATAATTGAGAC+CGG | + | chr5_3:18844863-18844882 | Msa0803600:intron | 30.0% |
| AAAAACACCATTACTTCATC+CGG | - | chr5_3:18844885-18844904 | None:intergenic | 30.0% | |
| AATTGCTTGTTTATTAGCTG+TGG | + | chr5_3:18845149-18845168 | Msa0803600:intron | 30.0% | |
| !!! | TGCTGCTTTTTCATTGTTTA+TGG | + | chr5_3:18845275-18845294 | Msa0803600:CDS | 30.0% |
| TTCATTGTTTATGGAATTGC+TGG | + | chr5_3:18845284-18845303 | Msa0803600:CDS | 30.0% | |
| TCATTGTTTATGGAATTGCT+GGG | + | chr5_3:18845285-18845304 | Msa0803600:CDS | 30.0% | |
| AATAAGTTCCACAATATCAC+AGG | - | chr5_3:18845448-18845467 | None:intergenic | 30.0% | |
| ATCCATTCATTTACCACAAA+AGG | - | chr5_3:18845539-18845558 | None:intergenic | 30.0% | |
| TTCACTGTAAATTTGTGGTT+TGG | - | chr5_3:18845822-18845841 | None:intergenic | 30.0% | |
| CAACATTCACTGTAAATTTG+TGG | - | chr5_3:18845827-18845846 | None:intergenic | 30.0% | |
| AATTTACAGTGAATGTTGTG+CGG | + | chr5_3:18845829-18845848 | Msa0803600:CDS | 30.0% | |
| GCATTAAACCATTTGTCATT+GGG | - | chr5_3:18845992-18846011 | None:intergenic | 30.0% | |
| AGCATTAAACCATTTGTCAT+TGG | - | chr5_3:18845993-18846012 | None:intergenic | 30.0% | |
| TTGCACCATAAAAAATACAG+AGG | + | chr5_3:18846251-18846270 | Msa0803600:intron | 30.0% | |
| CTACAATCTAAACAAACAGA+AGG | - | chr5_3:18846284-18846303 | None:intergenic | 30.0% | |
| ACTGTATTCACTACCAAAAT+AGG | + | chr5_3:18846752-18846771 | Msa0803600:intron | 30.0% | |
| CTGTATTCACTACCAAAATA+GGG | + | chr5_3:18846753-18846772 | Msa0803600:intron | 30.0% | |
| ! | ATGTAGAATCTACCCTATTT+TGG | - | chr5_3:18846768-18846787 | None:intergenic | 30.0% |
| AGTAGATTCACACGTAATTA+AGG | - | chr5_3:18846961-18846980 | None:intergenic | 30.0% | |
| GAACAAAAAAAGAAACGTAC+AGG | - | chr5_3:18847012-18847031 | None:intergenic | 30.0% | |
| AATGTGAATCAAAGAGTTGT+TGG | + | chr5_3:18847328-18847347 | Msa0803600:intron | 30.0% | |
| !!! | GAGAAGTACTTGTTTTTATG+TGG | - | chr5_3:18847379-18847398 | None:intergenic | 30.0% |
| AATAGAACTCATGAGTAATC+AGG | + | chr5_3:18847454-18847473 | Msa0803600:intron | 30.0% | |
| ! | ACACTAGAAAGTTGATTGTA+AGG | - | chr5_3:18847511-18847530 | None:intergenic | 30.0% |
| ! | TCTACTGATTAATACTAGAC+GGG | - | chr5_3:18847554-18847573 | None:intergenic | 30.0% |
| ! | TCATATTTGTAGGTTGGATT+TGG | + | chr5_3:18847598-18847617 | Msa0803600:intron | 30.0% |
| AATGGCTATAACTCATTCAA+AGG | - | chr5_3:18847626-18847645 | None:intergenic | 30.0% | |
| ! | CATCAATGACTGCAATTTTA+TGG | - | chr5_3:18847664-18847683 | None:intergenic | 30.0% |
| CATAAAATTGCAGTCATTGA+TGG | + | chr5_3:18847662-18847681 | Msa0803600:intron | 30.0% | |
| TTGATGTGCATTTGAACTTA+AGG | + | chr5_3:18847743-18847762 | Msa0803600:intron | 30.0% | |
| CATTTGAACTTAAGGACTTA+AGG | + | chr5_3:18847751-18847770 | Msa0803600:intron | 30.0% | |
| AACTTTCAAGCATCTGATAT+CGG | - | chr5_3:18847827-18847846 | None:intergenic | 30.0% | |
| AGAGGTTGTTTACTTCTTTA+TGG | - | chr5_3:18847873-18847892 | None:intergenic | 30.0% | |
| !! | GCTTCTAGAACACTATAAAT+AGG | - | chr5_3:18847983-18848002 | None:intergenic | 30.0% |
| TCCAAATATGATCTTAGTTC+TGG | + | chr5_3:18848037-18848056 | Msa0803600:intron | 30.0% | |
| !! | TAAGCTGATTTTCCATCTAT+TGG | + | chr5_3:18848085-18848104 | Msa0803600:intron | 30.0% |
| ACAACAGGAAACTATACTAT+TGG | + | chr5_3:18848114-18848133 | Msa0803600:intron | 30.0% | |
| ! | ATCAGCATATATTTTCTGCA+GGG | - | chr5_3:18848194-18848213 | None:intergenic | 30.0% |
| GGTGAATCAATCACTAATAA+TGG | - | chr5_3:18848283-18848302 | None:intergenic | 30.0% | |
| TGATACTAAGACAGATGATA+AGG | + | chr5_3:18848393-18848412 | Msa0803600:CDS | 30.0% | |
| AAATTTAAACAAGGCAAACG+TGG | + | chr5_3:18848531-18848550 | Msa0803600:CDS | 30.0% | |
| TGTAGATAATTCAACCATGA+AGG | + | chr5_3:18848603-18848622 | Msa0803600:CDS | 30.0% | |
| !! | GTTTTTAATTGTTTGACCCT+TGG | - | chr5_3:18848647-18848666 | None:intergenic | 30.0% |
| ! | TTTTGTTGGCATATTTCCAT+TGG | - | chr5_3:18848731-18848750 | None:intergenic | 30.0% |
| ACTATATTCTCTTCAAGAAC+AGG | - | chr5_3:18848787-18848806 | None:intergenic | 30.0% | |
| CTTGAAGAGAATATAGTTCT+AGG | + | chr5_3:18848790-18848809 | Msa0803600:CDS | 30.0% | |
| AGTTATCAGTGAGTTTAACT+AGG | + | chr5_3:18848980-18848999 | Msa0803600:three_prime_UTR | 30.0% | |
| TTAACTAGGTAGTTGTTTGA+AGG | + | chr5_3:18848994-18849013 | Msa0803600:three_prime_UTR | 30.0% | |
| TATATACAGCTTCTCAATGA+TGG | - | chr5_3:18849068-18849087 | None:intergenic | 30.0% | |
| ATACTGCCAATTTACTATCA+TGG | + | chr5_3:18849174-18849193 | Msa0803600:three_prime_UTR | 30.0% | |
| !!! | TTTTTTCTCATTCCTGATCT+TGG | - | chr5_3:18849214-18849233 | None:intergenic | 30.0% |
| TTTGTGACCTAACTCAACAA+TGG | - | chr5_3:18840902-18840921 | None:intergenic | 35.0% | |
| ! | TTTTTCTTTGTCTTCATCGC+AGG | + | chr5_3:18840928-18840947 | Msa0803600:five_prime_UTR | 35.0% |
| TTGTCAAATAACTGCTGTAG+TGG | - | chr5_3:18841267-18841286 | None:intergenic | 35.0% | |
| ! | AACTAGCTCTTGAATCTTGA+TGG | - | chr5_3:18841399-18841418 | None:intergenic | 35.0% |
| ! | AGAGCTAGTTTCAGATATTC+CGG | + | chr5_3:18841409-18841428 | Msa0803600:intron | 35.0% |
| TTTCAGATATTCCGGAGTTA+AGG | + | chr5_3:18841417-18841436 | Msa0803600:intron | 35.0% | |
| ! | ATGAAGCATCACAAAGGTTA+AGG | - | chr5_3:18841469-18841488 | None:intergenic | 35.0% |
| ! | AATCACATGAAGCATCACAA+AGG | - | chr5_3:18841475-18841494 | None:intergenic | 35.0% |
| ! | ATTAATATCAGTGTTGCTGC+AGG | + | chr5_3:18841496-18841515 | Msa0803600:intron | 35.0% |
| ACAACAGTCTGTACTCTATA+GGG | - | chr5_3:18841566-18841585 | None:intergenic | 35.0% | |
| ACAATAATAATGGCTCTTCC+TGG | + | chr5_3:18841635-18841654 | Msa0803600:exon | 35.0% | |
| !! | CTGAATGTATTTCTAGTACC+CGG | - | chr5_3:18841718-18841737 | None:intergenic | 35.0% |
| TACGTTCTTTGTTCAGGTAT+CGG | + | chr5_3:18841741-18841760 | Msa0803600:intron | 35.0% | |
| ! | TTTTCAAAGTCTGGATTCCT+TGG | + | chr5_3:18842065-18842084 | Msa0803600:intron | 35.0% |
| GCTGATATAATATTGGGTCT+TGG | + | chr5_3:18842185-18842204 | Msa0803600:intron | 35.0% | |
| !! | TTATGCTAGTGATGGGTTAA+TGG | - | chr5_3:18842258-18842277 | None:intergenic | 35.0% |
| AACACCTCCATCATATAAAC+AGG | + | chr5_3:18842557-18842576 | Msa0803600:CDS | 35.0% | |
| TTGACCTGTTTATATGATGG+AGG | - | chr5_3:18842564-18842583 | None:intergenic | 35.0% | |
| !!! | TGTCATTGTTTTTTAGTGCC+AGG | + | chr5_3:18842619-18842638 | Msa0803600:CDS | 35.0% |
| ACTTAAATTTGTGCGCTTGA+TGG | - | chr5_3:18842717-18842736 | None:intergenic | 35.0% | |
| GGAATCAACTTTACAATGAC+TGG | - | chr5_3:18842808-18842827 | None:intergenic | 35.0% | |
| ! | AAAAATGATAATGCCAACGG+CGG | - | chr5_3:18842830-18842849 | None:intergenic | 35.0% |
| ! | TCCTTGTCTGAAACATCAAT+GGG | - | chr5_3:18842870-18842889 | None:intergenic | 35.0% |
| ! | TTCCTTGTCTGAAACATCAA+TGG | - | chr5_3:18842871-18842890 | None:intergenic | 35.0% |
| !!! | GACAAGGAAACTGTTTTTTC+AGG | + | chr5_3:18842882-18842901 | Msa0803600:CDS | 35.0% |
| TGCAGAAGAGTGATAATAGT+TGG | + | chr5_3:18842992-18843011 | Msa0803600:intron | 35.0% | |
| GTGAAACCTGCAAATAAGTA+CGG | - | chr5_3:18843082-18843101 | None:intergenic | 35.0% | |
| ! | TAAATCATTGTCGACTGTAG+TGG | + | chr5_3:18843266-18843285 | Msa0803600:CDS | 35.0% |
| GGCATACCTTGATAAACAAT+AGG | - | chr5_3:18843298-18843317 | None:intergenic | 35.0% | |
| TCATTATTGTAGCATGCTTG+AGG | + | chr5_3:18843542-18843561 | Msa0803600:intron | 35.0% | |
| GCAAATTGGATCCAAAGATT+TGG | - | chr5_3:18843575-18843594 | None:intergenic | 35.0% | |
| TTACGGAAGCAAAACAGAAT+AGG | - | chr5_3:18843602-18843621 | None:intergenic | 35.0% | |
| AACTACTCTTCTCACTTGAT+AGG | - | chr5_3:18843768-18843787 | None:intergenic | 35.0% | |
| TAGTTAAAATGAGAGAGGAG+AGG | + | chr5_3:18843783-18843802 | Msa0803600:intron | 35.0% | |
| AGTTAAAATGAGAGAGGAGA+GGG | + | chr5_3:18843784-18843803 | Msa0803600:intron | 35.0% | |
| ! | TGAAGATGGTAAATTTTGGG+CGG | - | chr5_3:18843940-18843959 | None:intergenic | 35.0% |
| TTTACCATCTTCAGTAAGCA+AGG | + | chr5_3:18843947-18843966 | Msa0803600:intron | 35.0% | |
| TTACCATCTTCAGTAAGCAA+GGG | + | chr5_3:18843948-18843967 | Msa0803600:intron | 35.0% | |
| ! | ATGTACGATTAATGGACACA+AGG | - | chr5_3:18844124-18844143 | None:intergenic | 35.0% |
| TGTTCGTTAGTTGCAACAAA+GGG | - | chr5_3:18844210-18844229 | None:intergenic | 35.0% | |
| ! | AAGTTGTGACCTTTTCATCA+GGG | - | chr5_3:18844240-18844259 | None:intergenic | 35.0% |
| ! | AAAGTTGTGACCTTTTCATC+AGG | - | chr5_3:18844241-18844260 | None:intergenic | 35.0% |
| TGATGAAAAGGTCACAACTT+TGG | + | chr5_3:18844240-18844259 | Msa0803600:intron | 35.0% | |
| GATGAAAAGGTCACAACTTT+GGG | + | chr5_3:18844241-18844260 | Msa0803600:intron | 35.0% | |
| ATGAAAAGGTCACAACTTTG+GGG | + | chr5_3:18844242-18844261 | Msa0803600:intron | 35.0% | |
| GCAATCAAGTCATATGATCT+TGG | + | chr5_3:18844314-18844333 | Msa0803600:intron | 35.0% | |
| TCAAGTCATATGATCTTGGT+TGG | + | chr5_3:18844318-18844337 | Msa0803600:intron | 35.0% | |
| CAAGTCATATGATCTTGGTT+GGG | + | chr5_3:18844319-18844338 | Msa0803600:intron | 35.0% | |
| AGGAATGATGTCATTGAACA+TGG | - | chr5_3:18844686-18844705 | None:intergenic | 35.0% | |
| TTCTATGGAACAAGTTCTCA+TGG | + | chr5_3:18844753-18844772 | Msa0803600:intron | 35.0% | |
| GTCTTAATTAGGGTGACTTT+AGG | + | chr5_3:18844838-18844857 | Msa0803600:intron | 35.0% | |
| ! | TAGGGTGACTTTAGGTATTT+TGG | + | chr5_3:18844846-18844865 | Msa0803600:intron | 35.0% |
| ! | GAAAGAAAAGCATGTAGAAC+TGG | + | chr5_3:18844968-18844987 | Msa0803600:intron | 35.0% |
| TATAATATATGACAGCTCCC+AGG | + | chr5_3:18845002-18845021 | Msa0803600:intron | 35.0% | |
| GATGCATTATAGAAGACTAG+TGG | + | chr5_3:18845072-18845091 | Msa0803600:intron | 35.0% | |
| TGGTTCAATTTCATACGTCT+TGG | + | chr5_3:18845169-18845188 | Msa0803600:intron | 35.0% | |
| AAGCTGTTTATTCTGCAGTA+TGG | + | chr5_3:18845250-18845269 | Msa0803600:CDS | 35.0% | |
| ! | GACCTTTTGTGGTAAATGAA+TGG | + | chr5_3:18845534-18845553 | Msa0803600:CDS | 35.0% |
| TGGATTCAAACGAAGATTGA+AGG | + | chr5_3:18845554-18845573 | Msa0803600:CDS | 35.0% | |
| AACGAAGATTGAAGGATATG+AGG | + | chr5_3:18845562-18845581 | Msa0803600:CDS | 35.0% | |
| !!! | GATTTTGAGTTCTCTCAGTA+AGG | + | chr5_3:18845715-18845734 | Msa0803600:intron | 35.0% |
| TCTTCACCTCGTATAATTGT+TGG | - | chr5_3:18845780-18845799 | None:intergenic | 35.0% | |
| ACCTCACTCAAAAAACACAT+TGG | + | chr5_3:18845853-18845872 | Msa0803600:CDS | 35.0% | |
| !!! | TCCAATGTGTTTTTTGAGTG+AGG | - | chr5_3:18845857-18845876 | None:intergenic | 35.0% |
| TAAATGACTAATGGCTAGGT+GGG | - | chr5_3:18845889-18845908 | None:intergenic | 35.0% | |
| CATCTAAATGACTAATGGCT+AGG | - | chr5_3:18845893-18845912 | None:intergenic | 35.0% | |
| CAACATAAACCCTGAAAATC+AGG | + | chr5_3:18846103-18846122 | Msa0803600:CDS | 35.0% | |
| ATGATTCCGTGCTAAATTAC+AGG | + | chr5_3:18846168-18846187 | Msa0803600:intron | 35.0% | |
| TGATTCCGTGCTAAATTACA+GGG | + | chr5_3:18846169-18846188 | Msa0803600:intron | 35.0% | |
| GGCTAACAACTTCTATAAAG+AGG | - | chr5_3:18846221-18846240 | None:intergenic | 35.0% | |
| ATATACACGTAATTCTGTCC+TGG | - | chr5_3:18846319-18846338 | None:intergenic | 35.0% | |
| TACCACAATCTAAACAAACG+GGG | - | chr5_3:18846426-18846445 | None:intergenic | 35.0% | |
| CTACCACAATCTAAACAAAC+GGG | - | chr5_3:18846427-18846446 | None:intergenic | 35.0% | |
| GCTACCACAATCTAAACAAA+CGG | - | chr5_3:18846428-18846447 | None:intergenic | 35.0% | |
| ATATACACGTAATTCTGTCC+TGG | - | chr5_3:18846319-18846338 | None:intergenic | 35.0% | |
| CATTACACGTGATTCTATCT+AGG | - | chr5_3:18846541-18846560 | None:intergenic | 35.0% | |
| ACTGTGTACAATACACCAAA+TGG | + | chr5_3:18846623-18846642 | Msa0803600:intron | 35.0% | |
| TGTACAATACACCAAATGGT+GGG | + | chr5_3:18846627-18846646 | Msa0803600:intron | 35.0% | |
| ACATCATATTCGTACAACAG+AGG | + | chr5_3:18846913-18846932 | Msa0803600:intron | 35.0% | |
| TGAAATGTGGGTACACAAAT+CGG | - | chr5_3:18847043-18847062 | None:intergenic | 35.0% | |
| TGATTGTAAGGTTCAATGAG+TGG | - | chr5_3:18847499-18847518 | None:intergenic | 35.0% | |
| GATGACTGCTTCATATTTGT+AGG | + | chr5_3:18847588-18847607 | Msa0803600:intron | 35.0% | |
| ACTGCTTCATATTTGTAGGT+TGG | + | chr5_3:18847592-18847611 | Msa0803600:intron | 35.0% | |
| !!! | TGGGTTGGTTTTTCTATCAA+TGG | - | chr5_3:18847644-18847663 | None:intergenic | 35.0% |
| ! | ATGACTGCAATTTTATGGGT+TGG | - | chr5_3:18847659-18847678 | None:intergenic | 35.0% |
| ! | AGTCATTGATGGTTCAAGAT+CGG | + | chr5_3:18847673-18847692 | Msa0803600:intron | 35.0% |
| GCCAGAACTAAGATCATATT+TGG | - | chr5_3:18848041-18848060 | None:intergenic | 35.0% | |
| CAGCAGTTTATATTTGCTCA+AGG | + | chr5_3:18848060-18848079 | Msa0803600:intron | 35.0% | |
| ! | CATATATTTTCTGCAGGGTA+CGG | - | chr5_3:18848189-18848208 | None:intergenic | 35.0% |
| ! | CATCAGCATATATTTTCTGC+AGG | - | chr5_3:18848195-18848214 | None:intergenic | 35.0% |
| !! | AATAATGGACGGTTAGATAC+TGG | - | chr5_3:18848268-18848287 | None:intergenic | 35.0% |
| TCATCTGCATTGTTCTTGTA+AGG | - | chr5_3:18848304-18848323 | None:intergenic | 35.0% | |
| GATGATAAGGTTGAACCAAT+CGG | + | chr5_3:18848406-18848425 | Msa0803600:CDS | 35.0% | |
| AACTCAAGATGAATCTGAAG+TGG | + | chr5_3:18848453-18848472 | Msa0803600:CDS | 35.0% | |
| TTCGAAGTAGAAGACATTTC+CGG | - | chr5_3:18848562-18848581 | None:intergenic | 35.0% | |
| TACATCCAAACCAGTTACTT+TGG | - | chr5_3:18848587-18848606 | None:intergenic | 35.0% | |
| ATCCATGTCAAACAATCCAA+GGG | + | chr5_3:18848628-18848647 | Msa0803600:CDS | 35.0% | |
| AATATGCCAACAAAACAGCA+AGG | + | chr5_3:18848736-18848755 | Msa0803600:CDS | 35.0% | |
| !! | TATAGTTCTAGGTGTTGCAT+TGG | + | chr5_3:18848801-18848820 | Msa0803600:CDS | 35.0% |
| AAGATTGTAGATGCTACAAG+AGG | + | chr5_3:18848950-18848969 | Msa0803600:exon | 35.0% | |
| TCAGCAGTGTACTTAAAAGT+TGG | - | chr5_3:18849029-18849048 | None:intergenic | 35.0% | |
| ACACGTGGAAATCAAATCCA+TGG | + | chr5_3:18840704-18840723 | Msa0803600:five_prime_UTR | 40.0% | |
| AATCAAATCCATGGCTGACA+CGG | + | chr5_3:18840713-18840732 | Msa0803600:five_prime_UTR | 40.0% | |
| CACGGCAAGATTGAAAATTC+TGG | + | chr5_3:18840731-18840750 | Msa0803600:five_prime_UTR | 40.0% | |
| AGAATTTCGACACTTTCGGT+TGG | + | chr5_3:18840757-18840776 | Msa0803600:five_prime_UTR | 40.0% | |
| GAATTTCGACACTTTCGGTT+GGG | + | chr5_3:18840758-18840777 | Msa0803600:five_prime_UTR | 40.0% | |
| TTTGTCTATCTGCTTCTACG+AGG | - | chr5_3:18840876-18840895 | None:intergenic | 40.0% | |
| AGCTCTTGAATCTTGATGGA+AGG | - | chr5_3:18841395-18841414 | None:intergenic | 40.0% | |
| ACTTCACTAAGCCTTAACTC+CGG | - | chr5_3:18841431-18841450 | None:intergenic | 40.0% | |
| CACAACAGTCTGTACTCTAT+AGG | - | chr5_3:18841567-18841586 | None:intergenic | 40.0% | |
| ACCTGAACAGCAATAAAGAC+CGG | + | chr5_3:18841696-18841715 | Msa0803600:CDS | 40.0% | |
| CAGTTCTACGTTCTTTGTTC+AGG | + | chr5_3:18841735-18841754 | Msa0803600:intron | 40.0% | |
| ATACCGAAACTGGATAGGAA+GGG | - | chr5_3:18841852-18841871 | None:intergenic | 40.0% | |
| AGAACATACCGAAACTGGAT+AGG | - | chr5_3:18841857-18841876 | None:intergenic | 40.0% | |
| ACATACTACCCTTTGCTGAT+GGG | - | chr5_3:18842162-18842181 | None:intergenic | 40.0% | |
| TCCTGTTTAGCGCAATTGTT+GGG | - | chr5_3:18842226-18842245 | None:intergenic | 40.0% | |
| TTCCTGTTTAGCGCAATTGT+TGG | - | chr5_3:18842227-18842246 | None:intergenic | 40.0% | |
| !! | GTGATGGGTTAATGGATCTT+GGG | - | chr5_3:18842250-18842269 | None:intergenic | 40.0% |
| !! | AGTGATGGGTTAATGGATCT+TGG | - | chr5_3:18842251-18842270 | None:intergenic | 40.0% |
| !! | ATACTGGAAGAGTGCTGAAT+GGG | - | chr5_3:18842322-18842341 | None:intergenic | 40.0% |
| AGTTCATGAAACAGGACTAC+AGG | + | chr5_3:18842527-18842546 | Msa0803600:intron | 40.0% | |
| GTTCATGAAACAGGACTACA+GGG | + | chr5_3:18842528-18842547 | Msa0803600:intron | 40.0% | |
| TTCATGAAACAGGACTACAG+GGG | + | chr5_3:18842529-18842548 | Msa0803600:CDS | 40.0% | |
| ! | GCGTTGACCTGTTTATATGA+TGG | - | chr5_3:18842567-18842586 | None:intergenic | 40.0% |
| AATTGCGCTTCCTTCTGTTA+AGG | + | chr5_3:18842648-18842667 | Msa0803600:CDS | 40.0% | |
| ! | GCACTAACATACTTTTCTGC+AGG | + | chr5_3:18842758-18842777 | Msa0803600:intron | 40.0% |
| ! | AAAATGATAATGCCAACGGC+GGG | - | chr5_3:18842829-18842848 | None:intergenic | 40.0% |
| ! | ATTTTTGCAGTATGGGGTGT+TGG | + | chr5_3:18842844-18842863 | Msa0803600:CDS | 40.0% |
| GCTTCTGTAGGTAGAATTAC+TGG | - | chr5_3:18843210-18843229 | None:intergenic | 40.0% | |
| GGATAAGGCTTCTCATGAAA+GGG | - | chr5_3:18843417-18843436 | None:intergenic | 40.0% | |
| ! | ACAGAATAGGCACTGCAAAT+TGG | - | chr5_3:18843589-18843608 | None:intergenic | 40.0% |
| GTTAAAATGAGAGAGGAGAG+GGG | + | chr5_3:18843785-18843804 | Msa0803600:intron | 40.0% | |
| AGTCAAATGGAGAAAGGACT+AGG | - | chr5_3:18843999-18844018 | None:intergenic | 40.0% | |
| GTGTTCGTTAGTTGCAACAA+AGG | - | chr5_3:18844211-18844230 | None:intergenic | 40.0% | |
| ! | AGTTGTGACCTTTTCATCAG+GGG | - | chr5_3:18844239-18844258 | None:intergenic | 40.0% |
| TGAAAAGGTCACAACTTTGG+GGG | + | chr5_3:18844243-18844262 | Msa0803600:intron | 40.0% | |
| ! | CAACTTTGGGGGAATAAACA+TGG | + | chr5_3:18844254-18844273 | Msa0803600:intron | 40.0% |
| TCATATGATCTTGGTTGGGT+TGG | + | chr5_3:18844323-18844342 | Msa0803600:intron | 40.0% | |
| GCGAGGAAAAAAATCATAGG+CGG | + | chr5_3:18844385-18844404 | Msa0803600:intron | 40.0% | |
| TATGGAACAAGTTCTCATGG+AGG | + | chr5_3:18844756-18844775 | Msa0803600:intron | 40.0% | |
| ATGGAACAAGTTCTCATGGA+GGG | + | chr5_3:18844757-18844776 | Msa0803600:intron | 40.0% | |
| ATTGAGACCGGATGAAGTAA+TGG | + | chr5_3:18844875-18844894 | Msa0803600:intron | 40.0% | |
| AAACAGCTTTGCCTGCAAAT+TGG | - | chr5_3:18845239-18845258 | None:intergenic | 40.0% | |
| !!! | ACAGTTTTGTTGACTCTTGC+TGG | + | chr5_3:18845348-18845367 | Msa0803600:CDS | 40.0% |
| CGTAGTTACCTGTGATATTG+TGG | + | chr5_3:18845437-18845456 | Msa0803600:intron | 40.0% | |
| CATGAATCATTGCGCTTGAA+AGG | - | chr5_3:18845508-18845527 | None:intergenic | 40.0% | |
| ! | ATTGAAGGATATGAGGTGTC+TGG | + | chr5_3:18845569-18845588 | Msa0803600:CDS | 40.0% |
| TGGTCACCAACAATTATACG+AGG | + | chr5_3:18845771-18845790 | Msa0803600:CDS | 40.0% | |
| CTAAATGACTAATGGCTAGG+TGG | - | chr5_3:18845890-18845909 | None:intergenic | 40.0% | |
| AGAACATTGTTGCTGACATG+CGG | + | chr5_3:18846018-18846037 | Msa0803600:intron | 40.0% | |
| ! | CTGCTCAACTTGAGGATTTT+TGG | - | chr5_3:18846054-18846073 | None:intergenic | 40.0% |
| CGCTTATGGTATGTATGAAC+TGG | + | chr5_3:18846126-18846145 | Msa0803600:intron | 40.0% | |
| GATTCCGTGCTAAATTACAG+GGG | + | chr5_3:18846170-18846189 | Msa0803600:intron | 40.0% | |
| AAGACCCCTGTAATTTAGCA+CGG | - | chr5_3:18846177-18846196 | None:intergenic | 40.0% | |
| TTATGGTGCAACGATGTTTG+TGG | - | chr5_3:18846242-18846261 | None:intergenic | 40.0% | |
| TTGTAGTAGCTATCAGTACC+AGG | + | chr5_3:18846298-18846317 | Msa0803600:intron | 40.0% | |
| ACCACAATCTAAACAAACGG+GGG | - | chr5_3:18846425-18846444 | None:intergenic | 40.0% | |
| GTGTACAATACACCAAATGG+TGG | + | chr5_3:18846626-18846645 | Msa0803600:intron | 40.0% | |
| GGCATTTACAATGTAACCTC+AGG | - | chr5_3:18846701-18846720 | None:intergenic | 40.0% | |
| AGGTTACATTGTAAATGCCG+TGG | + | chr5_3:18846702-18846721 | Msa0803600:intron | 40.0% | |
| GATTCACACGTAATTAAGGC+AGG | - | chr5_3:18846957-18846976 | None:intergenic | 40.0% | |
| TGGGTACACAAATCGGATTT+GGG | - | chr5_3:18847036-18847055 | None:intergenic | 40.0% | |
| TTTGTGTACCCACATTTCAC+TGG | + | chr5_3:18847044-18847063 | Msa0803600:intron | 40.0% | |
| TGTTCCTACCAGTGAAATGT+GGG | - | chr5_3:18847055-18847074 | None:intergenic | 40.0% | |
| ATGTTCCTACCAGTGAAATG+TGG | - | chr5_3:18847056-18847075 | None:intergenic | 40.0% | |
| TTATGAGTTATGACTGCGTG+AGG | - | chr5_3:18847297-18847316 | None:intergenic | 40.0% | |
| ! | GTCATTGATGGTTCAAGATC+GGG | + | chr5_3:18847674-18847693 | Msa0803600:intron | 40.0% |
| AATGCACATCAATAACACCC+AGG | - | chr5_3:18847735-18847754 | None:intergenic | 40.0% | |
| TCAAGCATCTGATATCGGAT+TGG | - | chr5_3:18847822-18847841 | None:intergenic | 40.0% | |
| ! | GCGTGTTCTTGTTTGTTTGT+TGG | + | chr5_3:18848001-18848020 | Msa0803600:intron | 40.0% |
| TTAGAGTTATCAGCCATCAC+CGG | + | chr5_3:18848143-18848162 | Msa0803600:CDS | 40.0% | |
| ! | AATATATGCTGATGCCGACT+TGG | + | chr5_3:18848201-18848220 | Msa0803600:CDS | 40.0% |
| GTATGGTATGTTGTCCAAGT+CGG | - | chr5_3:18848218-18848237 | None:intergenic | 40.0% | |
| TTGAATGTGGAATCTGCGTA+TGG | - | chr5_3:18848235-18848254 | None:intergenic | 40.0% | |
| TACGCAGATTCCACATTCAA+TGG | + | chr5_3:18848235-18848254 | Msa0803600:CDS | 40.0% | |
| AAGATGACAAGACAACTGTG+CGG | + | chr5_3:18848362-18848381 | Msa0803600:CDS | 40.0% | |
| GTTCCTCTAACCTTAGTATC+TGG | - | chr5_3:18848436-18848455 | None:intergenic | 40.0% | |
| AGAGTTAGATGCCATGACTT+TGG | - | chr5_3:18848482-18848501 | None:intergenic | 40.0% | |
| ATGGCATCTAACTCTGATGT+TGG | + | chr5_3:18848487-18848506 | Msa0803600:CDS | 40.0% | |
| TTTAAACAAGGCAAACGTGG+AGG | + | chr5_3:18848534-18848553 | Msa0803600:CDS | 40.0% | |
| ACTTCGAACTCCAAAGTAAC+TGG | + | chr5_3:18848574-18848593 | Msa0803600:CDS | 40.0% | |
| GAACTCCAAAGTAACTGGTT+TGG | + | chr5_3:18848579-18848598 | Msa0803600:CDS | 40.0% | |
| TTTGACATGGATGTCCTTCA+TGG | - | chr5_3:18848620-18848639 | None:intergenic | 40.0% | |
| CATCCATGTCAAACAATCCA+AGG | + | chr5_3:18848627-18848646 | Msa0803600:CDS | 40.0% | |
| ! | AGATTTTCTGAGTCGACGTT+TGG | - | chr5_3:18848676-18848695 | None:intergenic | 40.0% |
| !! | AACAGCACTGACAAAACCAA+TGG | + | chr5_3:18848712-18848731 | Msa0803600:CDS | 40.0% |
| !!! | CTTTCTCCTTGCTGTTTTGT+TGG | - | chr5_3:18848745-18848764 | None:intergenic | 40.0% |
| CAACAAAACAGCAAGGAGAA+AGG | + | chr5_3:18848743-18848762 | Msa0803600:CDS | 40.0% | |
| ! | GTGTCGATCTCATCATTGAT+AGG | - | chr5_3:18848847-18848866 | None:intergenic | 40.0% |
| AACTCAAGAGGCAAAGGAAA+TGG | + | chr5_3:18848873-18848892 | Msa0803600:CDS | 40.0% | |
| TTCTCTTACTAGCCAAGATC+AGG | + | chr5_3:18849199-18849218 | Msa0803600:three_prime_UTR | 40.0% | |
| GCGCAGAATTTCGACACTTT+CGG | + | chr5_3:18840753-18840772 | Msa0803600:five_prime_UTR | 45.0% | |
| TAACTGCTGTAGTGGCATAG+CGG | - | chr5_3:18841259-18841278 | None:intergenic | 45.0% | |
| ! | GTTAAAGCGCTATAGCGTAG+CGG | - | chr5_3:18841324-18841343 | None:intergenic | 45.0% |
| CCTGAACAGCAATAAAGACC+GGG | + | chr5_3:18841697-18841716 | Msa0803600:CDS | 45.0% | |
| ! | TACCACTTCATGGTTTGCAG+AGG | + | chr5_3:18841788-18841807 | Msa0803600:intron | 45.0% |
| ! | ACCACTTCATGGTTTGCAGA+GGG | + | chr5_3:18841789-18841808 | Msa0803600:intron | 45.0% |
| ! | TCATGGTTTGCAGAGGGTAA+AGG | + | chr5_3:18841795-18841814 | Msa0803600:intron | 45.0% |
| ! | CATGGTTTGCAGAGGGTAAA+GGG | + | chr5_3:18841796-18841815 | Msa0803600:intron | 45.0% |
| ! | ATGGTTTGCAGAGGGTAAAG+GGG | + | chr5_3:18841797-18841816 | Msa0803600:intron | 45.0% |
| ATGCCCTTCCTATCCAGTTT+CGG | + | chr5_3:18841846-18841865 | Msa0803600:CDS | 45.0% | |
| CATACCGAAACTGGATAGGA+AGG | - | chr5_3:18841853-18841872 | None:intergenic | 45.0% | |
| TGTGCCAGCGTTGTTGTAAA+CGG | + | chr5_3:18841931-18841950 | Msa0803600:intron | 45.0% | |
| CACATACTACCCTTTGCTGA+TGG | - | chr5_3:18842163-18842182 | None:intergenic | 45.0% | |
| !! | GATACTGGAAGAGTGCTGAA+TGG | - | chr5_3:18842323-18842342 | None:intergenic | 45.0% |
| TCCACTGCAGTTCATGAAAC+AGG | + | chr5_3:18842519-18842538 | Msa0803600:intron | 45.0% | |
| TCCTGTTTCATGAACTGCAG+TGG | - | chr5_3:18842523-18842542 | None:intergenic | 45.0% | |
| GTAGTAGCCACCTTAACAGA+AGG | - | chr5_3:18842661-18842680 | None:intergenic | 45.0% | |
| !! | TGGCTACTACAGTACTGACA+AGG | + | chr5_3:18842671-18842690 | Msa0803600:CDS | 45.0% |
| GCCCATTGATGTTTCAGACA+AGG | + | chr5_3:18842866-18842885 | Msa0803600:CDS | 45.0% | |
| AAAGTCGTTCCTTAACAGCC+TGG | - | chr5_3:18843236-18843255 | None:intergenic | 45.0% | |
| CGGATAAGGCTTCTCATGAA+AGG | - | chr5_3:18843418-18843437 | None:intergenic | 45.0% | |
| GAGGACTTTCCCCAAATCTT+TGG | + | chr5_3:18843561-18843580 | Msa0803600:intron | 45.0% | |
| GCAAGCGAGACAAGAAATGT+TGG | + | chr5_3:18843694-18843713 | Msa0803600:intron | 45.0% | |
| TGTGGAGAGAGATTAGAAGG+GGG | - | chr5_3:18843872-18843891 | None:intergenic | 45.0% | |
| GTGTGGAGAGAGATTAGAAG+GGG | - | chr5_3:18843873-18843892 | None:intergenic | 45.0% | |
| CGTGTGGAGAGAGATTAGAA+GGG | - | chr5_3:18843874-18843893 | None:intergenic | 45.0% | |
| ! | AGCAGAAACTGAAGAAGCGT+AGG | - | chr5_3:18843897-18843916 | None:intergenic | 45.0% |
| GTTCCCTTGCTTACTGAAGA+TGG | - | chr5_3:18843954-18843973 | None:intergenic | 45.0% | |
| CACAATTCCCCCTGATGAAA+AGG | + | chr5_3:18844228-18844247 | Msa0803600:intron | 45.0% | |
| ! | GTTGTGACCTTTTCATCAGG+GGG | - | chr5_3:18844238-18844257 | None:intergenic | 45.0% |
| ATTGAAGGGAAGAGAATGCG+AGG | + | chr5_3:18844368-18844387 | Msa0803600:intron | 45.0% | |
| ACCCATCTATATACTTCGCC+CGG | + | chr5_3:18844593-18844612 | Msa0803600:intron | 45.0% | |
| ACCGGGCGAAGTATATAGAT+GGG | - | chr5_3:18844597-18844616 | None:intergenic | 45.0% | |
| TACCGGGCGAAGTATATAGA+TGG | - | chr5_3:18844598-18844617 | None:intergenic | 45.0% | |
| CAGATGGGATTCCAATTTGC+AGG | + | chr5_3:18845225-18845244 | Msa0803600:intron | 45.0% | |
| ! | TGGGCTTTTCTACCCAGAAA+TGG | + | chr5_3:18845304-18845323 | Msa0803600:CDS | 45.0% |
| ! | GGGCTTTTCTACCCAGAAAT+GGG | + | chr5_3:18845305-18845324 | Msa0803600:CDS | 45.0% |
| ! | TCATGCAACTCGACCTTTTG+TGG | + | chr5_3:18845523-18845542 | Msa0803600:CDS | 45.0% |
| TTTCCTGCTATGCAGCATGT+TGG | + | chr5_3:18845744-18845763 | Msa0803600:intron | 45.0% | |
| ! | TGCTGACATGCGGAAAGTAT+TGG | + | chr5_3:18846028-18846047 | Msa0803600:CDS | 45.0% |
| !!! | GTTGCACAGGAGAGTGTTTT+TGG | + | chr5_3:18846079-18846098 | Msa0803600:CDS | 45.0% |
| ! | CCATAAGCGCCTGATTTTCA+GGG | - | chr5_3:18846115-18846134 | None:intergenic | 45.0% |
| ! | ACCATAAGCGCCTGATTTTC+AGG | - | chr5_3:18846116-18846135 | None:intergenic | 45.0% |
| !! | TTAACGAAAGCACTCGTCGA+AGG | - | chr5_3:18846358-18846377 | None:intergenic | 45.0% |
| CCACAATCTAAACAAACGGG+GGG | - | chr5_3:18846424-18846443 | None:intergenic | 45.0% | |
| TTGTGGTAGCTATCAGTACC+AGG | + | chr5_3:18846438-18846457 | Msa0803600:intron | 45.0% | |
| AATGCCGTGGTCAAATGCTT+AGG | + | chr5_3:18846715-18846734 | Msa0803600:intron | 45.0% | |
| ATGCCGTGGTCAAATGCTTA+GGG | + | chr5_3:18846716-18846735 | Msa0803600:intron | 45.0% | |
| GTACCCTAAGCATTTGACCA+CGG | - | chr5_3:18846722-18846741 | None:intergenic | 45.0% | |
| GTGGGTACACAAATCGGATT+TGG | - | chr5_3:18847037-18847056 | None:intergenic | 45.0% | |
| TGTACCCACATTTCACTGGT+AGG | + | chr5_3:18847048-18847067 | Msa0803600:intron | 45.0% | |
| TCACTGGTAGGAACATTCGT+TGG | + | chr5_3:18847060-18847079 | Msa0803600:intron | 45.0% | |
| TAGAGTTATCAGCCATCACC+GGG | + | chr5_3:18848144-18848163 | Msa0803600:CDS | 45.0% | |
| GATTCCACATTCAATGGTGC+TGG | + | chr5_3:18848241-18848260 | Msa0803600:CDS | 45.0% | |
| AGATGACAAGACAACTGTGC+GGG | + | chr5_3:18848363-18848382 | Msa0803600:CDS | 45.0% | |
| TTAGTATCTGGTGCTCCGAT+TGG | - | chr5_3:18848424-18848443 | None:intergenic | 45.0% | |
| ! | AATCGGAGCACCAGATACTA+AGG | + | chr5_3:18848423-18848442 | Msa0803600:CDS | 45.0% |
| GCACCAGATACTAAGGTTAG+AGG | + | chr5_3:18848430-18848449 | Msa0803600:CDS | 45.0% | |
| TGAAGTGGATGCCAAAGTCA+TGG | + | chr5_3:18848468-18848487 | Msa0803600:CDS | 45.0% | |
| GACCCTTGGATTGTTTGACA+TGG | - | chr5_3:18848633-18848652 | None:intergenic | 45.0% | |
| !! | GTCAGTGCTGTTTGTTGATG+AGG | - | chr5_3:18848704-18848723 | None:intergenic | 45.0% |
| TTCTCTTCAAGAACAGGCCT+GGG | - | chr5_3:18848781-18848800 | None:intergenic | 45.0% | |
| ATTCTCTTCAAGAACAGGCC+TGG | - | chr5_3:18848782-18848801 | None:intergenic | 45.0% | |
| ! | GTTCTAGGTGTTGCATTGGA+TGG | + | chr5_3:18848805-18848824 | Msa0803600:CDS | 45.0% |
| TGTGACAACTCAAGAGGCAA+AGG | + | chr5_3:18848867-18848886 | Msa0803600:CDS | 45.0% | |
| GATCTCCAAAGGCTTCAGAT+GGG | + | chr5_3:18848917-18848936 | Msa0803600:CDS | 45.0% | |
| ! | ACATTCCCATCTGAAGCCTT+TGG | - | chr5_3:18848925-18848944 | None:intergenic | 45.0% |
| !! | ATAAAATTATTGAAAAATTT+GGG | - | chr5_3:18840979-18840998 | None:intergenic | 5.0% |
| !! | AATAAAATTATTGAAAAATT+TGG | - | chr5_3:18840980-18840999 | None:intergenic | 5.0% |
| !!! | ATTATTAATTTTTTTTTTAG+AGG | - | chr5_3:18847891-18847910 | None:intergenic | 5.0% |
| GTTCCCTGCAACTGTCTCAT+GGG | + | chr5_3:18841657-18841676 | Msa0803600:CDS | 50.0% | |
| ! | CCCGGTCTTTATTGCTGTTC+AGG | - | chr5_3:18841700-18841719 | None:intergenic | 50.0% |
| ACCCTCTGCAAACCATGAAG+TGG | - | chr5_3:18841793-18841812 | None:intergenic | 50.0% | |
| GCAACCGTTTACAACAACGC+TGG | - | chr5_3:18841938-18841957 | None:intergenic | 50.0% | |
| CGTTGTTGTAAACGGTTGCC+TGG | + | chr5_3:18841939-18841958 | Msa0803600:intron | 50.0% | |
| TTTGCCACACCCATCAGCAA+AGG | + | chr5_3:18842150-18842169 | Msa0803600:intron | 50.0% | |
| TTGCCACACCCATCAGCAAA+GGG | + | chr5_3:18842151-18842170 | Msa0803600:intron | 50.0% | |
| TATTGGGTCTTGGTCCTACG+TGG | + | chr5_3:18842195-18842214 | Msa0803600:intron | 50.0% | |
| ATTGTTGGGCGTAACCACGT+AGG | - | chr5_3:18842212-18842231 | None:intergenic | 50.0% | |
| GCCCAACAATTGCGCTAAAC+AGG | + | chr5_3:18842222-18842241 | Msa0803600:intron | 50.0% | |
| TGCGCTTCCTTCTGTTAAGG+TGG | + | chr5_3:18842651-18842670 | Msa0803600:CDS | 50.0% | |
| ! | GTAAAGTTGATTCCCGCCGT+TGG | + | chr5_3:18842814-18842833 | Msa0803600:CDS | 50.0% |
| ACCTTCGACCACTACTGTTG+TGG | + | chr5_3:18843049-18843068 | Msa0803600:CDS | 50.0% | |
| TCCACAACAGTAGTGGTCGA+AGG | - | chr5_3:18843053-18843072 | None:intergenic | 50.0% | |
| CTGGAGCCGTACTTATTTGC+AGG | + | chr5_3:18843073-18843092 | Msa0803600:CDS | 50.0% | |
| TCTACCTACAGAAGCTAGCC+AGG | + | chr5_3:18843215-18843234 | Msa0803600:CDS | 50.0% | |
| AGAAGCTAGCCAGGCTGTTA+AGG | + | chr5_3:18843224-18843243 | Msa0803600:CDS | 50.0% | |
| GCGTGTGGAGAGAGATTAGA+AGG | - | chr5_3:18843875-18843894 | None:intergenic | 50.0% | |
| ! | AATTTTGGGCGGTGATGTGC+AGG | - | chr5_3:18843929-18843948 | None:intergenic | 50.0% |
| TCCTGCTGTGACCCATTTCT+GGG | - | chr5_3:18845319-18845338 | None:intergenic | 50.0% | |
| !! | ATCCTCAAGTTGAGCAGCAG+AGG | + | chr5_3:18846057-18846076 | Msa0803600:CDS | 50.0% |
| AACCTCTGCTGCTCAACTTG+AGG | - | chr5_3:18846062-18846081 | None:intergenic | 50.0% | |
| CCCTGAAAATCAGGCGCTTA+TGG | + | chr5_3:18846112-18846131 | Msa0803600:CDS | 50.0% | |
| CCCCCCGTTTGTTTAGATTG+TGG | + | chr5_3:18846421-18846440 | Msa0803600:intron | 50.0% | |
| !! | TCAACGAAAGCACTCGTCGA+AGG | - | chr5_3:18846498-18846517 | None:intergenic | 50.0% |
| ACGAAAGGGATCCCACCATT+TGG | - | chr5_3:18846641-18846660 | None:intergenic | 50.0% | |
| CAATGTAACCTCAGGTCAGC+CGG | - | chr5_3:18846693-18846712 | None:intergenic | 50.0% | |
| CTCCTGCAAAGCTCTTGATC+AGG | + | chr5_3:18847396-18847415 | Msa0803600:intron | 50.0% | |
| AGCCTGATCAAGAGCTTTGC+AGG | - | chr5_3:18847401-18847420 | None:intergenic | 50.0% | |
| TCAATGAGTGGCACGTGGAA+GGG | - | chr5_3:18847487-18847506 | None:intergenic | 50.0% | |
| TTCAATGAGTGGCACGTGGA+AGG | - | chr5_3:18847488-18847507 | None:intergenic | 50.0% | |
| AAGGTTCAATGAGTGGCACG+TGG | - | chr5_3:18847492-18847511 | None:intergenic | 50.0% | |
| ! | ATTTTCTGCAGGGTACGGAC+TGG | - | chr5_3:18848184-18848203 | None:intergenic | 50.0% |
| TGGTCCAGCACCATTGAATG+TGG | - | chr5_3:18848248-18848267 | None:intergenic | 50.0% | |
| TTCTGAGTCGACGTTTGGCT+TGG | - | chr5_3:18848671-18848690 | None:intergenic | 50.0% | |
| CGACACTGTGACAACTCAAG+AGG | + | chr5_3:18848861-18848880 | Msa0803600:CDS | 50.0% | |
| AAAGGAAATGGCTGCATCCC+AGG | + | chr5_3:18848885-18848904 | Msa0803600:CDS | 50.0% | |
| AAGGAAATGGCTGCATCCCA+GGG | + | chr5_3:18848886-18848905 | Msa0803600:CDS | 50.0% | |
| TGGAGATCCATTTCCACCCT+GGG | - | chr5_3:18848905-18848924 | None:intergenic | 50.0% | |
| TTGGAGATCCATTTCCACCC+TGG | - | chr5_3:18848906-18848925 | None:intergenic | 50.0% | |
| GGGTGGAAATGGATCTCCAA+AGG | + | chr5_3:18848906-18848925 | Msa0803600:CDS | 50.0% | |
| GGATCTCCAAAGGCTTCAGA+TGG | + | chr5_3:18848916-18848935 | Msa0803600:CDS | 50.0% | |
| CAATCTTGCCGTGTCAGCCA+TGG | - | chr5_3:18840724-18840743 | None:intergenic | 55.0% | |
| TGAGACAGTTGCAGGGAACC+AGG | - | chr5_3:18841656-18841675 | None:intergenic | 55.0% | |
| GGTTCCCTGCAACTGTCTCA+TGG | + | chr5_3:18841656-18841675 | Msa0803600:CDS | 55.0% | |
| CAGCCCATGAGACAGTTGCA+GGG | - | chr5_3:18841663-18841682 | None:intergenic | 55.0% | |
| CTGCAACTGTCTCATGGGCT+GGG | + | chr5_3:18841662-18841681 | Msa0803600:CDS | 55.0% | |
| AATGGGCACAGTTGCATGCC+AGG | - | chr5_3:18841960-18841979 | None:intergenic | 55.0% | |
| ! | CTACCCTTTGCTGATGGGTG+TGG | - | chr5_3:18842157-18842176 | None:intergenic | 55.0% |
| CGACCACTACTGTTGTGGAC+TGG | + | chr5_3:18843054-18843073 | Msa0803600:CDS | 55.0% | |
| GCTCCAGTCCACAACAGTAG+TGG | - | chr5_3:18843060-18843079 | None:intergenic | 55.0% | |
| !! | ACAGCCTGGCTAGCTTCTGT+AGG | - | chr5_3:18843222-18843241 | None:intergenic | 55.0% |
| ! | ACTGAAGAAGCGTAGGCGTG+TGG | - | chr5_3:18843890-18843909 | None:intergenic | 55.0% |
| AATCCGATCCTACCCCACTG+TGG | + | chr5_3:18844146-18844165 | Msa0803600:intron | 55.0% | |
| CGGCGAGAGAGAGATCAGAA+GGG | + | chr5_3:18844405-18844424 | Msa0803600:intron | 55.0% | |
| GGCGAGAGAGAGATCAGAAG+GGG | + | chr5_3:18844406-18844425 | Msa0803600:intron | 55.0% | |
| GCGAGAGAGAGATCAGAAGG+GGG | + | chr5_3:18844407-18844426 | Msa0803600:intron | 55.0% | |
| ACCCAGAAATGGGTCACAGC+AGG | + | chr5_3:18845315-18845334 | Msa0803600:CDS | 55.0% | |
| CTCCTGCTGTGACCCATTTC+TGG | - | chr5_3:18845320-18845339 | None:intergenic | 55.0% | |
| CAGAAATGGGTCACAGCAGG+AGG | + | chr5_3:18845318-18845337 | Msa0803600:CDS | 55.0% | |
| ! | TGGGTCACAGCAGGAGGTTT+TGG | + | chr5_3:18845324-18845343 | Msa0803600:CDS | 55.0% |
| ! | GGGTCACAGCAGGAGGTTTT+GGG | + | chr5_3:18845325-18845344 | Msa0803600:CDS | 55.0% |
| ! | GTTGACTCTTGCTGGTCGTG+AGG | + | chr5_3:18845356-18845375 | Msa0803600:CDS | 55.0% |
| ! | TGAGGTGTCTGGCACTGTTG+AGG | + | chr5_3:18845580-18845599 | Msa0803600:CDS | 55.0% |
| CAGCCAACATGCTGCATAGC+AGG | - | chr5_3:18845750-18845769 | None:intergenic | 55.0% | |
| CTGCTATGCAGCATGTTGGC+TGG | + | chr5_3:18845748-18845767 | Msa0803600:intron | 55.0% | |
| ! | CTATGCAGCATGTTGGCTGG+TGG | + | chr5_3:18845751-18845770 | Msa0803600:intron | 55.0% |
| TTGAGCAGCAGAGGTTGCAC+AGG | + | chr5_3:18846066-18846085 | Msa0803600:CDS | 55.0% | |
| !! | CGAAAGCACTCGTCGAAGGT+CGG | - | chr5_3:18846354-18846373 | None:intergenic | 55.0% |
| !! | CGAAAGCACTCGTCGAAGGT+CGG | - | chr5_3:18846354-18846373 | None:intergenic | 55.0% |
| ACGTACGCAGGGTCACGAAA+GGG | - | chr5_3:18846655-18846674 | None:intergenic | 55.0% | |
| TTTCGTGACCCTGCGTACGT+GGG | + | chr5_3:18846655-18846674 | Msa0803600:intron | 55.0% | |
| CTTAAGCTCCCACGTACGCA+GGG | - | chr5_3:18846666-18846685 | None:intergenic | 55.0% | |
| ACTTAAGCTCCCACGTACGC+AGG | - | chr5_3:18846667-18846686 | None:intergenic | 55.0% | |
| ACGTGGGAGCTTAAGTGCAC+CGG | + | chr5_3:18846671-18846690 | Msa0803600:intron | 55.0% | |
| !! | TACGGACTGGTGTTGCAAGC+CGG | - | chr5_3:18848171-18848190 | None:intergenic | 55.0% |
| AAAGGAAACCTGCTGCACCC+AGG | + | chr5_3:18848761-18848780 | Msa0803600:CDS | 55.0% | |
| CCAGCCCATGAGACAGTTGC+AGG | - | chr5_3:18841664-18841683 | None:intergenic | 60.0% | |
| CCTGCAACTGTCTCATGGGC+TGG | + | chr5_3:18841661-18841680 | Msa0803600:CDS | 60.0% | |
| !! | CTCATGGGCTGGGACTTTGC+AGG | + | chr5_3:18841672-18841691 | Msa0803600:CDS | 60.0% |
| ! | GGAAGCGCAATTCGTTCGCC+TGG | - | chr5_3:18842640-18842659 | None:intergenic | 60.0% |
| CCACCACAGTGGGGTAGGAT+CGG | - | chr5_3:18844152-18844171 | None:intergenic | 60.0% | |
| ACGACCAAGCCACCACAGTG+GGG | - | chr5_3:18844161-18844180 | None:intergenic | 60.0% | |
| CACGACCAAGCCACCACAGT+GGG | - | chr5_3:18844162-18844181 | None:intergenic | 60.0% | |
| ACACGACCAAGCCACCACAG+TGG | - | chr5_3:18844163-18844182 | None:intergenic | 60.0% | |
| GCGGCGAGAGAGAGATCAGA+AGG | + | chr5_3:18844404-18844423 | Msa0803600:intron | 60.0% | |
| CACGTACGCAGGGTCACGAA+AGG | - | chr5_3:18846656-18846675 | None:intergenic | 60.0% | |
| CTTTCGTGACCCTGCGTACG+TGG | + | chr5_3:18846654-18846673 | Msa0803600:intron | 60.0% | |
| !! | TAAGTGCACCGGCTGACCTG+AGG | + | chr5_3:18846682-18846701 | Msa0803600:intron | 60.0% |
| TTATCAGCCATCACCGGGCC+CGG | + | chr5_3:18848149-18848168 | Msa0803600:CDS | 60.0% | |
| !! | ACGGACTGGTGTTGCAAGCC+GGG | - | chr5_3:18848170-18848189 | None:intergenic | 60.0% |
| ! | CAAGGCAAACGTGGAGGTGC+CGG | + | chr5_3:18848540-18848559 | Msa0803600:CDS | 60.0% |
| GAAATGGCTGCATCCCAGGG+TGG | + | chr5_3:18848889-18848908 | Msa0803600:CDS | 60.0% | |
| GCTGCATCCCAGGGTGGAAA+TGG | + | chr5_3:18848895-18848914 | Msa0803600:CDS | 60.0% | |
| CCGATCCTACCCCACTGTGG+TGG | + | chr5_3:18844149-18844168 | Msa0803600:intron | 65.0% | |
| CCAAGCCACCACAGTGGGGT+AGG | - | chr5_3:18844157-18844176 | None:intergenic | 65.0% | |
| CCTACCCCACTGTGGTGGCT+TGG | + | chr5_3:18844154-18844173 | Msa0803600:intron | 65.0% | |
| AGAACAGGCCTGGGTGCAGC+AGG | - | chr5_3:18848772-18848791 | None:intergenic | 65.0% | |
| TTGCAAGCCGGGCCCGGTGA+TGG | - | chr5_3:18848159-18848178 | None:intergenic | 70.0% | |
| !! | CTGGTGTTGCAAGCCGGGCC+CGG | - | chr5_3:18848165-18848184 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_3 | gene | 18840695 | 18849251 | 18840695 | ID=Msa0803600;Name=Msa0803600 |
| chr5_3 | mRNA | 18840695 | 18849251 | 18840695 | ID=Msa0803600-mRNA-1;Parent=Msa0803600;Name=Msa0803600-mRNA-1;_AED=0.10;_eAED=0.10;_QI=381|0.92|0.92|1|0.84|0.78|14|300|700 |
| chr5_3 | exon | 18840695 | 18840949 | 18840695 | ID=Msa0803600-mRNA-1:exon:7717;Parent=Msa0803600-mRNA-1 |
| chr5_3 | exon | 18841518 | 18841718 | 18841518 | ID=Msa0803600-mRNA-1:exon:7718;Parent=Msa0803600-mRNA-1 |
| chr5_3 | exon | 18841808 | 18841867 | 18841808 | ID=Msa0803600-mRNA-1:exon:7719;Parent=Msa0803600-mRNA-1 |
| chr5_3 | exon | 18842529 | 18842692 | 18842529 | ID=Msa0803600-mRNA-1:exon:7720;Parent=Msa0803600-mRNA-1 |
| chr5_3 | exon | 18842780 | 18842903 | 18842780 | ID=Msa0803600-mRNA-1:exon:7721;Parent=Msa0803600-mRNA-1 |
| chr5_3 | exon | 18842997 | 18843094 | 18842997 | ID=Msa0803600-mRNA-1:exon:7722;Parent=Msa0803600-mRNA-1 |
| chr5_3 | exon | 18843197 | 18843310 | 18843197 | ID=Msa0803600-mRNA-1:exon:7723;Parent=Msa0803600-mRNA-1 |
| chr5_3 | exon | 18843651 | 18843687 | 18843651 | ID=Msa0803600-mRNA-1:exon:7724;Parent=Msa0803600-mRNA-1 |
| chr5_3 | exon | 18845228 | 18845377 | 18845228 | ID=Msa0803600-mRNA-1:exon:7725;Parent=Msa0803600-mRNA-1 |
| chr5_3 | exon | 18845491 | 18845601 | 18845491 | ID=Msa0803600-mRNA-1:exon:7726;Parent=Msa0803600-mRNA-1 |
| chr5_3 | exon | 18845759 | 18845926 | 18845759 | ID=Msa0803600-mRNA-1:exon:7727;Parent=Msa0803600-mRNA-1 |
| chr5_3 | exon | 18846020 | 18846133 | 18846020 | ID=Msa0803600-mRNA-1:exon:7728;Parent=Msa0803600-mRNA-1 |
| chr5_3 | exon | 18847188 | 18847244 | 18847188 | ID=Msa0803600-mRNA-1:exon:7729;Parent=Msa0803600-mRNA-1 |
| chr5_3 | exon | 18848121 | 18849251 | 18848121 | ID=Msa0803600-mRNA-1:exon:7730;Parent=Msa0803600-mRNA-1 |
| chr5_3 | five_prime_UTR | 18840695 | 18840949 | 18840695 | ID=Msa0803600-mRNA-1:five_prime_utr;Parent=Msa0803600-mRNA-1 |
| chr5_3 | five_prime_UTR | 18841518 | 18841643 | 18841518 | ID=Msa0803600-mRNA-1:five_prime_utr;Parent=Msa0803600-mRNA-1 |
| chr5_3 | CDS | 18841644 | 18841718 | 18841644 | ID=Msa0803600-mRNA-1:cds;Parent=Msa0803600-mRNA-1 |
| chr5_3 | CDS | 18841808 | 18841867 | 18841808 | ID=Msa0803600-mRNA-1:cds;Parent=Msa0803600-mRNA-1 |
| chr5_3 | CDS | 18842529 | 18842692 | 18842529 | ID=Msa0803600-mRNA-1:cds;Parent=Msa0803600-mRNA-1 |
| chr5_3 | CDS | 18842780 | 18842903 | 18842780 | ID=Msa0803600-mRNA-1:cds;Parent=Msa0803600-mRNA-1 |
| chr5_3 | CDS | 18842997 | 18843094 | 18842997 | ID=Msa0803600-mRNA-1:cds;Parent=Msa0803600-mRNA-1 |
| chr5_3 | CDS | 18843197 | 18843310 | 18843197 | ID=Msa0803600-mRNA-1:cds;Parent=Msa0803600-mRNA-1 |
| chr5_3 | CDS | 18843651 | 18843687 | 18843651 | ID=Msa0803600-mRNA-1:cds;Parent=Msa0803600-mRNA-1 |
| chr5_3 | CDS | 18845228 | 18845377 | 18845228 | ID=Msa0803600-mRNA-1:cds;Parent=Msa0803600-mRNA-1 |
| chr5_3 | CDS | 18845491 | 18845601 | 18845491 | ID=Msa0803600-mRNA-1:cds;Parent=Msa0803600-mRNA-1 |
| chr5_3 | CDS | 18845759 | 18845926 | 18845759 | ID=Msa0803600-mRNA-1:cds;Parent=Msa0803600-mRNA-1 |
| chr5_3 | CDS | 18846020 | 18846133 | 18846020 | ID=Msa0803600-mRNA-1:cds;Parent=Msa0803600-mRNA-1 |
| chr5_3 | CDS | 18847188 | 18847244 | 18847188 | ID=Msa0803600-mRNA-1:cds;Parent=Msa0803600-mRNA-1 |
| chr5_3 | CDS | 18848121 | 18848951 | 18848121 | ID=Msa0803600-mRNA-1:cds;Parent=Msa0803600-mRNA-1 |
| chr5_3 | three_prime_UTR | 18848952 | 18849251 | 18848952 | ID=Msa0803600-mRNA-1:three_prime_utr;Parent=Msa0803600-mRNA-1 |
| Gene Sequence |
| Protein sequence |
