Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0866580 | XP_003613048.2 | 94.076 | 709 | 29 | 3 | 1 | 700 | 1 | 705 | 0.0 | 1373 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0866580 | sp|Q56X46|MSL2_ARATH | 54.622 | 714 | 255 | 13 | 1 | 700 | 1 | 659 | 0.0 | 731 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0866580 | G7JWE5 | 94.076 | 709 | 29 | 3 | 1 | 700 | 1 | 705 | 0.0 | 1373 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0011410 | Msa0866580 | 0.820799 | 5.665618e-53 | -8.615850e-47 |
| Msa0011440 | Msa0866580 | 0.809045 | 2.297347e-50 | -8.615850e-47 |
| Msa0011450 | Msa0866580 | 0.844185 | 8.840784e-59 | -8.615850e-47 |
| Msa0044530 | Msa0866580 | 0.800879 | 1.171814e-48 | -8.615850e-47 |
| Msa0066890 | Msa0866580 | 0.801141 | 1.035902e-48 | -8.615850e-47 |
| Msa0091240 | Msa0866580 | 0.804510 | 2.087164e-49 | -8.615850e-47 |
| Msa0105140 | Msa0866580 | 0.803541 | 3.318596e-49 | -8.615850e-47 |
| Msa0721420 | Msa0866580 | 0.805738 | 1.154710e-49 | -8.615850e-47 |
| Msa0803600 | Msa0866580 | 0.980384 | 4.282689e-150 | -8.615850e-47 |
| Msa0151380 | Msa0866580 | 0.829201 | 5.875874e-55 | -8.615850e-47 |
| Msa0151510 | Msa0866580 | 0.834750 | 2.501437e-56 | -8.615850e-47 |
| Msa0371290 | Msa0866580 | 0.836754 | 7.773318e-57 | -8.615850e-47 |
| Msa0375930 | Msa0866580 | 0.810945 | 8.954577e-51 | -8.615850e-47 |
| Msa0424570 | Msa0866580 | 0.813666 | 2.280699e-51 | -8.615850e-47 |
| Msa0463820 | Msa0866580 | 0.808134 | 3.594886e-50 | -8.615850e-47 |
| Msa0516000 | Msa0866580 | 0.812874 | 3.404162e-51 | -8.615850e-47 |
| Msa0866580 | Msa1011140 | 0.806502 | 7.973811e-50 | -8.615850e-47 |
| Msa0866580 | Msa1179680 | 0.800311 | 1.529936e-48 | -8.615850e-47 |
| Msa0866580 | Msa1219530 | 0.801186 | 1.014015e-48 | -8.615850e-47 |
| Msa0866580 | Msa1332340 | 0.806531 | 7.863826e-50 | -8.615850e-47 |
| Msa0866580 | Msa1333220 | 0.801518 | 8.668760e-49 | -8.615850e-47 |
| Msa0866580 | Msa1409360 | 0.800221 | 1.595408e-48 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0866580 | MtrunA17_Chr5g0412241 | 94.076 | 709 | 29 | 3 | 1 | 700 | 1 | 705 | 0.0 | 1373 |
| Msa0866580 | MtrunA17_Chr3g0132931 | 54.621 | 725 | 264 | 18 | 1 | 696 | 12 | 700 | 0.0 | 728 |
| Msa0866580 | MtrunA17_Chr3g0132961 | 58.932 | 487 | 181 | 5 | 76 | 550 | 86 | 565 | 0.0 | 586 |
| Msa0866580 | MtrunA17_Chr3g0132941 | 37.017 | 181 | 77 | 6 | 302 | 472 | 133 | 286 | 8.47e-19 | 88.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0866580 | AT5G10490.1 | 54.622 | 714 | 255 | 13 | 1 | 700 | 1 | 659 | 0.0 | 731 |
| Msa0866580 | AT5G10490.3 | 54.391 | 706 | 253 | 13 | 9 | 700 | 7 | 657 | 0.0 | 719 |
| Msa0866580 | AT5G10490.2 | 54.745 | 685 | 241 | 13 | 30 | 700 | 2 | 631 | 0.0 | 707 |
| Msa0866580 | AT1G58200.2 | 53.991 | 639 | 252 | 10 | 48 | 670 | 48 | 660 | 0.0 | 647 |
| Msa0866580 | AT1G58200.1 | 53.991 | 639 | 252 | 10 | 48 | 670 | 48 | 660 | 0.0 | 647 |
Find 189 sgRNAs with CRISPR-Local
Find 549 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTCCTGCTGTGACCCATTTC+TGG | 0.154402 | 5_4:+68343703 | None:intergenic |
| TTCATTGTTTATGGAATTGC+TGG | 0.209952 | 5_4:-68343736 | Msa0866580:CDS |
| CCCTGAAAATCAGGCGCTTA+TGG | 0.229014 | 5_4:-68342908 | Msa0866580:intron |
| TGGGTCACAGCAGGAGGTTT+TGG | 0.264140 | 5_4:-68343696 | Msa0866580:CDS |
| CTTGAAGAGAATATAGTTCT+AGG | 0.264601 | 5_4:-68340243 | Msa0866580:CDS |
| CCTGCAACTGTCTCATGGTC+TGG | 0.284110 | 5_4:-68347366 | Msa0866580:CDS |
| AAACAGCTTTGCCTGCAAAT+TGG | 0.292527 | 5_4:+68343784 | None:intergenic |
| TTGATTTGATACAATAATAA+TGG | 0.300417 | 5_4:-68347402 | Msa0866580:exon |
| CTGGAGCCGTACTTATTTGC+AGG | 0.302317 | 5_4:-68345954 | Msa0866580:intron |
| CAGATGGGATTCCAATTTGC+AGG | 0.306719 | 5_4:-68343795 | Msa0866580:CDS |
| AGAAATCCATGATAGTAAAT+TGG | 0.317491 | 5_4:+68339837 | None:intergenic |
| ACAACAGGAAACTATACTAT+TGG | 0.323288 | 5_4:-68340919 | Msa0866580:intron |
| TTCACTGTAAATTTGTGGTT+TGG | 0.331136 | 5_4:+68343201 | None:intergenic |
| ACTTCGAACTCCAAAGTAAC+TGG | 0.333268 | 5_4:-68340459 | Msa0866580:CDS |
| AAGCTGTTTATTCTGCAGTA+TGG | 0.334963 | 5_4:-68343770 | Msa0866580:CDS |
| TGAAGAATATTTGTGTGTTA+AGG | 0.336393 | 5_4:-68341814 | Msa0866580:intron |
| GGTGAATCAATCACTAATAA+TGG | 0.340030 | 5_4:+68340753 | None:intergenic |
| CTCATGGTCTGGGACTTTGC+AGG | 0.348404 | 5_4:-68347355 | Msa0866580:CDS |
| CACGGCAAGATTGAAAATTC+TGG | 0.351780 | 5_4:-68348293 | Msa0866580:five_prime_UTR |
| CCAGACCATGAGACAGTTGC+AGG | 0.359043 | 5_4:+68347366 | None:intergenic |
| ACATTCCCATCTGAAGCCTT+TGG | 0.359063 | 5_4:+68340111 | None:intergenic |
| GCGCAGAATTTCGACACTTT+CGG | 0.360962 | 5_4:-68348271 | Msa0866580:five_prime_UTR |
| CACAACAGTCTGTACTCTAT+AGG | 0.361922 | 5_4:+68347463 | None:intergenic |
| TCCTGCTGTGACCCATTTCT+GGG | 0.363829 | 5_4:+68343704 | None:intergenic |
| TCATCTGCATTGTTCTTGTA+AGG | 0.368675 | 5_4:+68340732 | None:intergenic |
| AGAAGCTAGCCAGGCTGTTA+AGG | 0.368941 | 5_4:-68345803 | Msa0866580:CDS |
| TTCGAAGTAGAAGACATTTC+CGG | 0.370534 | 5_4:+68340474 | None:intergenic |
| ATCCATTCATTTACCACAAA+AGG | 0.372902 | 5_4:+68343484 | None:intergenic |
| CAACATAAACCCTGAAAATC+AGG | 0.374249 | 5_4:-68342917 | Msa0866580:CDS |
| GTTCCTCTAACCTTAGTATC+TGG | 0.375006 | 5_4:+68340600 | None:intergenic |
| GCTGCATCCCAGGGTGGAAA+TGG | 0.375974 | 5_4:-68340138 | Msa0866580:CDS |
| CATGGTTTGCAGAGGGTAAA+GGG | 0.378613 | 5_4:-68347231 | Msa0866580:intron |
| ATTTACATCTAAATGACTAA+TGG | 0.383147 | 5_4:+68343125 | None:intergenic |
| GCTTCTGTAGGTAGAATTAC+TGG | 0.386567 | 5_4:+68345820 | None:intergenic |
| ACAACAGTCTGTACTCTATA+GGG | 0.399252 | 5_4:+68347464 | None:intergenic |
| TTTGACATGGATGTCCTTCA+TGG | 0.400435 | 5_4:+68340416 | None:intergenic |
| ATACTGCCAATTTACTATCA+TGG | 0.402919 | 5_4:-68339843 | Msa0866580:three_prime_UTR |
| AAAGGAAATGGCTGCATCCC+AGG | 0.406454 | 5_4:-68340148 | Msa0866580:CDS |
| CAACATTCACTGTAAATTTG+TGG | 0.406561 | 5_4:+68343196 | None:intergenic |
| TCCACTGCAGTTCATGAAAC+AGG | 0.407725 | 5_4:-68346508 | Msa0866580:intron |
| TGGAGATCCATTTCCACCCT+GGG | 0.408019 | 5_4:+68340131 | None:intergenic |
| GAACTCCAAAGTAACTGGTT+TGG | 0.416317 | 5_4:-68340454 | Msa0866580:CDS |
| CTGCAACTGTCTCATGGTCT+GGG | 0.419855 | 5_4:-68347365 | Msa0866580:CDS |
| ACTATATTCTCTTCAAGAAC+AGG | 0.420455 | 5_4:+68340249 | None:intergenic |
| TTAACTAGGTAGTTGTTTGA+AGG | 0.422202 | 5_4:-68340039 | Msa0866580:three_prime_UTR |
| CTGCTATGCAGCATGTTGGC+TGG | 0.422368 | 5_4:-68343272 | Msa0866580:intron |
| TTCTGAGTCGACGTTTGGCT+TGG | 0.422652 | 5_4:+68340365 | None:intergenic |
| TTCCTTGTCTGAAACATCAA+TGG | 0.423767 | 5_4:+68346159 | None:intergenic |
| AACTCAAGAGGCAAAGGAAA+TGG | 0.428446 | 5_4:-68340160 | Msa0866580:CDS |
| TTCTTTGTCTTCATCGTCGC+AGG | 0.428639 | 5_4:-68348090 | Msa0866580:intron |
| TACATCCAAACCAGTTACTT+TGG | 0.431492 | 5_4:+68340449 | None:intergenic |
| ATGCCCTTCCTATCCAGTTT+CGG | 0.431692 | 5_4:-68347181 | Msa0866580:intron |
| ACAATAATAATGGCTCTTCC+TGG | 0.432880 | 5_4:-68347392 | Msa0866580:exon |
| AATTGCGCTTCCTTCTGTTA+AGG | 0.434176 | 5_4:-68346379 | Msa0866580:CDS |
| TCAAAATTTGCAATACTACT+TGG | 0.434428 | 5_4:-68347429 | Msa0866580:five_prime_UTR |
| GAATTTCGACACTTTCGGTT+GGG | 0.434680 | 5_4:-68348266 | Msa0866580:five_prime_UTR |
| GGAATCAACTTTACAATGAC+TGG | 0.435897 | 5_4:+68346222 | None:intergenic |
| TTGCAAGCCGGGCCCGGTGA+TGG | 0.436371 | 5_4:+68340877 | None:intergenic |
| ACGGACTGGTGTTGCAAGCC+GGG | 0.443801 | 5_4:+68340866 | None:intergenic |
| AACACCTCCATCATATAAAC+AGG | 0.444100 | 5_4:-68346470 | Msa0866580:CDS |
| TATATACAGCTTCTCAATGA+TGG | 0.449718 | 5_4:+68339968 | None:intergenic |
| CCCGGTCTTTATTGCTGTTG+AGG | 0.450363 | 5_4:+68347330 | None:intergenic |
| TCTTCACCTCGTATAATTGT+TGG | 0.451139 | 5_4:+68343243 | None:intergenic |
| TATTATTGTATCAAATCAAA+TGG | 0.452211 | 5_4:+68347406 | None:intergenic |
| GTGTCGATCTCATCATTGAT+AGG | 0.453284 | 5_4:+68340189 | None:intergenic |
| TCATGGTTTGCAGAGGGTAA+AGG | 0.457739 | 5_4:-68347232 | Msa0866580:intron |
| TACGGACTGGTGTTGCAAGC+CGG | 0.459422 | 5_4:+68340865 | None:intergenic |
| AGAGTTAGATGCCATGACTT+TGG | 0.460895 | 5_4:+68340554 | None:intergenic |
| AGAACAGGCCTGGGTGCAGC+AGG | 0.461011 | 5_4:+68340264 | None:intergenic |
| CATGAATCATTGCGCTTGAA+AGG | 0.462593 | 5_4:+68343515 | None:intergenic |
| CTGGTGTTGCAAGCCGGGCC+CGG | 0.463501 | 5_4:+68340871 | None:intergenic |
| TGCAGAAGAGTGATAATAGT+TGG | 0.463555 | 5_4:-68346035 | Msa0866580:intron |
| GGCATACCTTGATAAACAAT+AGG | 0.464220 | 5_4:+68345732 | None:intergenic |
| ATTCTCTTCAAGAACAGGCC+TGG | 0.464804 | 5_4:+68340254 | None:intergenic |
| AGAATTTCGACACTTTCGGT+TGG | 0.465603 | 5_4:-68348267 | Msa0866580:five_prime_UTR |
| TTCTCTTCAAGAACAGGCCT+GGG | 0.467602 | 5_4:+68340255 | None:intergenic |
| GGTTCCCTGCAACTGTCTCA+TGG | 0.469167 | 5_4:-68347371 | Msa0866580:CDS |
| TCTACCTACAGAAGCTAGCC+AGG | 0.470503 | 5_4:-68345812 | Msa0866580:CDS |
| TTGTTTAAATTTGATTTCAG+TGG | 0.471535 | 5_4:+68340513 | None:intergenic |
| CAAGGCAAACGTGGAGGTGC+CGG | 0.471773 | 5_4:-68340493 | Msa0866580:CDS |
| AATAATGGACGGTTAGATAC+TGG | 0.471945 | 5_4:+68340768 | None:intergenic |
| GCACCAGATACTAAGGTTAG+AGG | 0.473803 | 5_4:-68340603 | Msa0866580:CDS |
| GTTCTAGGTGTTGCATTGGA+TGG | 0.475070 | 5_4:-68340228 | Msa0866580:CDS |
| CAATCTTGCCGTGTCAGCCA+TGG | 0.475221 | 5_4:+68348303 | None:intergenic |
| TTGAGCAGCAGAGGTTGCAC+AGG | 0.475903 | 5_4:-68342954 | Msa0866580:CDS |
| TTGGAGATCCATTTCCACCC+TGG | 0.477458 | 5_4:+68340130 | None:intergenic |
| TCAGCAGTGTACTTAAAAGT+TGG | 0.478903 | 5_4:+68340007 | None:intergenic |
| GATTCCACATTCAATGGTGC+TGG | 0.479877 | 5_4:-68340792 | Msa0866580:CDS |
| TTATCAGCCATCACCGGGCC+CGG | 0.485518 | 5_4:-68340884 | Msa0866580:CDS |
| GGAAGCGCAATTCGTTCGCC+TGG | 0.491141 | 5_4:+68346390 | None:intergenic |
| CAACAAAACAGCAAGGAGAA+AGG | 0.493006 | 5_4:-68340290 | Msa0866580:CDS |
| TATCAATTGATTATTGATTG+TGG | 0.496201 | 5_4:+68348242 | None:intergenic |
| AGTTCATGAAACAGGACTAC+AGG | 0.497346 | 5_4:-68346500 | Msa0866580:CDS |
| GTCAGTGCTGTTTGTTGATG+AGG | 0.497401 | 5_4:+68340332 | None:intergenic |
| TCATTGTTTATGGAATTGCT+GGG | 0.497570 | 5_4:-68343735 | Msa0866580:CDS |
| ATAAACCTCAAAACCTCTGA+GGG | 0.498349 | 5_4:+68339920 | None:intergenic |
| TCCTTGTCTGAAACATCAAT+GGG | 0.500430 | 5_4:+68346160 | None:intergenic |
| TTAGAGTTATCAGCCATCAC+CGG | 0.505279 | 5_4:-68340890 | Msa0866580:CDS |
| TGATACTAAGACAGATGATA+AGG | 0.506673 | 5_4:-68340640 | Msa0866580:CDS |
| ATTGAAGGATATGAGGTGTC+TGG | 0.508645 | 5_4:-68343451 | Msa0866580:CDS |
| TTAGTATCTGGTGCTCCGAT+TGG | 0.509276 | 5_4:+68340612 | None:intergenic |
| TATAGTTCTAGGTGTTGCAT+TGG | 0.512352 | 5_4:-68340232 | Msa0866580:CDS |
| AACGAAGATTGAAGGATATG+AGG | 0.513606 | 5_4:-68343458 | Msa0866580:CDS |
| TGGATTCAAACGAAGATTGA+AGG | 0.514774 | 5_4:-68343466 | Msa0866580:CDS |
| TACGCAGATTCCACATTCAA+TGG | 0.517140 | 5_4:-68340798 | Msa0866580:CDS |
| GATGATAAGGTTGAACCAAT+CGG | 0.521027 | 5_4:-68340627 | Msa0866580:CDS |
| ACCCAGAAATGGGTCACAGC+AGG | 0.524431 | 5_4:-68343705 | Msa0866580:CDS |
| ACCTCAACAGCAATAAAGAC+CGG | 0.528072 | 5_4:-68347331 | Msa0866580:CDS |
| AATATATGCTGATGCCGACT+TGG | 0.529619 | 5_4:-68340832 | Msa0866580:CDS |
| AGTTATCAGTGAGTTTAACT+AGG | 0.534077 | 5_4:-68340053 | Msa0866580:three_prime_UTR |
| GGATCTCCAAAGGCTTCAGA+TGG | 0.535083 | 5_4:-68340117 | Msa0866580:CDS |
| TAGAGTTATCAGCCATCACC+GGG | 0.538032 | 5_4:-68340889 | Msa0866580:CDS |
| GCGTTGACCTGTTTATATGA+TGG | 0.539034 | 5_4:+68346463 | None:intergenic |
| AAAGTCGTTCCTTAACAGCC+TGG | 0.540283 | 5_4:+68345794 | None:intergenic |
| TGCTGACATGCGGAAAGTAT+TGG | 0.540499 | 5_4:-68342992 | Msa0866580:CDS |
| TGAGACAGTTGCAGGGAACC+AGG | 0.541607 | 5_4:+68347374 | None:intergenic |
| TGCGCTTCCTTCTGTTAAGG+TGG | 0.542081 | 5_4:-68346376 | Msa0866580:CDS |
| CATACCGAAACTGGATAGGA+AGG | 0.542460 | 5_4:+68347177 | None:intergenic |
| TAAATGACTAATGGCTAGGT+GGG | 0.548938 | 5_4:+68343134 | None:intergenic |
| AATCGGAGCACCAGATACTA+AGG | 0.549308 | 5_4:-68340610 | Msa0866580:CDS |
| ACCTTCGACCACTACTGTTG+TGG | 0.550457 | 5_4:-68345978 | Msa0866580:CDS |
| TAAATCATTGTCGACTGTAG+TGG | 0.552113 | 5_4:-68345761 | Msa0866580:CDS |
| AATCAAATCCATGGCTGACA+CGG | 0.554843 | 5_4:-68348311 | Msa0866580:five_prime_UTR |
| TGTAGATAATTCAACCATGA+AGG | 0.555353 | 5_4:-68340430 | Msa0866580:CDS |
| AACCTCTGCTGCTCAACTTG+AGG | 0.556309 | 5_4:+68342961 | None:intergenic |
| CATCCATGTCAAACAATCCA+AGG | 0.556452 | 5_4:-68340406 | Msa0866580:CDS |
| GCCCATTGATGTTTCAGACA+AGG | 0.557479 | 5_4:-68346161 | Msa0866580:CDS |
| ATCCTCAAGTTGAGCAGCAG+AGG | 0.557486 | 5_4:-68342963 | Msa0866580:CDS |
| CATCTAAATGACTAATGGCT+AGG | 0.558832 | 5_4:+68343130 | None:intergenic |
| GTGAAACCTGCAAATAAGTA+CGG | 0.563725 | 5_4:+68345948 | None:intergenic |
| AGAACATACCGAAACTGGAT+AGG | 0.565614 | 5_4:+68347173 | None:intergenic |
| GACCCTTGGATTGTTTGACA+TGG | 0.566336 | 5_4:+68340403 | None:intergenic |
| CGACCACTACTGTTGTGGAC+TGG | 0.567856 | 5_4:-68345973 | Msa0866580:CDS |
| GTAAAGTTGATTCCCGCCGT+TGG | 0.568974 | 5_4:-68346213 | Msa0866580:CDS |
| GTTCATGAAACAGGACTACA+GGG | 0.577067 | 5_4:-68346499 | Msa0866580:CDS |
| CTAAATGACTAATGGCTAGG+TGG | 0.579708 | 5_4:+68343133 | None:intergenic |
| AAGGAAATGGCTGCATCCCA+GGG | 0.591945 | 5_4:-68340147 | Msa0866580:CDS |
| TTTCCTGCTATGCAGCATGT+TGG | 0.592657 | 5_4:-68343276 | Msa0866580:intron |
| CTATGCAGCATGTTGGCTGG+TGG | 0.593054 | 5_4:-68343269 | Msa0866580:intron |
| GTTGACTCTTGCTGGTCGTG+AGG | 0.596075 | 5_4:-68343664 | Msa0866580:intron |
| TGGTCCAGCACCATTGAATG+TGG | 0.597823 | 5_4:+68340788 | None:intergenic |
| AGATGACAAGACAACTGTGC+GGG | 0.598292 | 5_4:-68340670 | Msa0866580:CDS |
| ACACGTGGAAATCAAATCCA+TGG | 0.602278 | 5_4:-68348320 | Msa0866580:five_prime_UTR |
| AAAGGAAACCTGCTGCACCC+AGG | 0.609838 | 5_4:-68340272 | Msa0866580:CDS |
| CAGAAATGGGTCACAGCAGG+AGG | 0.610702 | 5_4:-68343702 | Msa0866580:CDS |
| GTAGTAGCCACCTTAACAGA+AGG | 0.612590 | 5_4:+68346369 | None:intergenic |
| CGACACTGTGACAACTCAAG+AGG | 0.612765 | 5_4:-68340172 | Msa0866580:CDS |
| CAAATATTCTTCAAAATGTG+AGG | 0.613476 | 5_4:+68341824 | None:intergenic |
| GGGTGGAAATGGATCTCCAA+AGG | 0.613690 | 5_4:-68340127 | Msa0866580:CDS |
| ACAGCCTGGCTAGCTTCTGT+AGG | 0.614293 | 5_4:+68345808 | None:intergenic |
| TGTGACAACTCAAGAGGCAA+AGG | 0.614507 | 5_4:-68340166 | Msa0866580:CDS |
| AAAATGATAATGCCAACGGC+GGG | 0.615340 | 5_4:+68346201 | None:intergenic |
| AACTCAAGATGAATCTGATG+TGG | 0.618277 | 5_4:-68340580 | Msa0866580:CDS |
| AACAGCACTGACAAAACCAA+TGG | 0.619573 | 5_4:-68340321 | Msa0866580:CDS |
| CCTCAACAGCAATAAAGACC+GGG | 0.619667 | 5_4:-68347330 | Msa0866580:intron |
| TGATAAAATGAAAAGTCGAT+CGG | 0.619705 | 5_4:-68340712 | Msa0866580:CDS |
| TTTGTGACCTAACACAACAA+TGG | 0.620723 | 5_4:+68348122 | None:intergenic |
| AATTTACAGTGAATGTTGTG+CGG | 0.627582 | 5_4:-68343191 | Msa0866580:CDS |
| ATGGTTTGCAGAGGGTAAAG+GGG | 0.628389 | 5_4:-68347230 | Msa0866580:intron |
| GATCTCCAAAGGCTTCAGAT+GGG | 0.629921 | 5_4:-68340116 | Msa0866580:CDS |
| AAGATTGTAGATGCTACAAG+AGG | 0.630653 | 5_4:-68340083 | Msa0866580:three_prime_UTR |
| AATCAATCACTAATAATGGA+CGG | 0.634189 | 5_4:+68340757 | None:intergenic |
| GCTCCAGTCCACAACAGTAG+TGG | 0.636987 | 5_4:+68345970 | None:intergenic |
| ACTTTGTCAATCTTTCAACT+CGG | 0.637694 | 5_4:+68347505 | None:intergenic |
| TTGACCTGTTTATATGATGG+AGG | 0.637854 | 5_4:+68346466 | None:intergenic |
| ATGGCATCTAACTCTGATGT+TGG | 0.638476 | 5_4:-68340546 | Msa0866580:CDS |
| TCCACAACAGTAGTGGTCGA+AGG | 0.642801 | 5_4:+68345977 | None:intergenic |
| TGAAGTTACTATGTAATGAG+TGG | 0.643990 | 5_4:+68346002 | None:intergenic |
| TTTGTCTATCTGCTTATACG+AGG | 0.645863 | 5_4:+68348148 | None:intergenic |
| ATCCATGTCAAACAATCCAA+GGG | 0.645943 | 5_4:-68340405 | Msa0866580:CDS |
| AAATTTAAACAAGGCAAACG+TGG | 0.647403 | 5_4:-68340502 | Msa0866580:CDS |
| TTGAATGTGGAATCTGCGTA+TGG | 0.650833 | 5_4:+68340801 | None:intergenic |
| GTATGGTATGTTGTCCAAGT+CGG | 0.651077 | 5_4:+68340818 | None:intergenic |
| TGATGTGGATGCCAAAGTCA+TGG | 0.662127 | 5_4:-68340565 | Msa0866580:CDS |
| TGAGGTGTCTGGCACTGTTG+AGG | 0.674638 | 5_4:-68343440 | Msa0866580:intron |
| ATACCGAAACTGGATAGGAA+GGG | 0.676356 | 5_4:+68347178 | None:intergenic |
| CAGACCATGAGACAGTTGCA+GGG | 0.680728 | 5_4:+68347367 | None:intergenic |
| ACTGAAATCAAATTTAAACA+AGG | 0.682136 | 5_4:-68340511 | Msa0866580:CDS |
| AGAACATTGTTGCTGACATG+CGG | 0.687401 | 5_4:-68343002 | Msa0866580:CDS |
| AATATGCCAACAAAACAGCA+AGG | 0.689521 | 5_4:-68340297 | Msa0866580:CDS |
| TTTAAACAAGGCAAACGTGG+AGG | 0.690639 | 5_4:-68340499 | Msa0866580:CDS |
| GTAATTCATATACCCCTCAG+AGG | 0.692022 | 5_4:-68339933 | Msa0866580:intron |
| TGGCTACTACAGTACTGACA+AGG | 0.701942 | 5_4:-68346356 | Msa0866580:intron |
| GAACGTTTGAAGTAGACACG+TGG | 0.721212 | 5_4:-68348335 | None:intergenic |
| GAAATGGCTGCATCCCAGGG+TGG | 0.725308 | 5_4:-68340144 | Msa0866580:CDS |
| TAAACCTCAAAACCTCTGAG+GGG | 0.734731 | 5_4:+68339921 | None:intergenic |
| TGGTCACCAACAATTATACG+AGG | 0.753319 | 5_4:-68343249 | Msa0866580:CDS |
| AAGATGACAAGACAACTGTG+CGG | 0.761123 | 5_4:-68340671 | Msa0866580:CDS |
| TTCATGAAACAGGACTACAG+GGG | 0.786260 | 5_4:-68346498 | Msa0866580:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTAAAAATAATAGACAAT+CGG | + | chr5_4:68342570-68342589 | None:intergenic | 10.0% |
| !! | AACAATATCAATTAATATAT+GGG | + | chr5_4:68343670-68343689 | None:intergenic | 10.0% |
| !! | AAACAATATCAATTAATATA+TGG | + | chr5_4:68343671-68343690 | None:intergenic | 10.0% |
| !! | ATAATGTAATAAAAAAGTAA+TGG | + | chr5_4:68343929-68343948 | None:intergenic | 10.0% |
| !! | AAAATATCATAAAACAATAT+TGG | + | chr5_4:68345107-68345126 | None:intergenic | 10.0% |
| !!! | ATTACTTCTTTATTTTTATA+AGG | + | chr5_4:68346012-68346031 | None:intergenic | 10.0% |
| !! | TATTATTGTATCAAATCAAA+TGG | + | chr5_4:68340756-68340775 | None:intergenic | 15.0% |
| !!! | TTGATTTGATACAATAATAA+TGG | - | chr5_4:68340757-68340776 | Msa0866580:CDS | 15.0% |
| !! | TTCTTAAAAACATTAAGATA+TGG | - | chr5_4:68341005-68341024 | Msa0866580:intron | 15.0% |
| !! | ATTCAAATTTCAAAGAAAAT+GGG | + | chr5_4:68341109-68341128 | None:intergenic | 15.0% |
| !! | AATTCAAATTTCAAAGAAAA+TGG | + | chr5_4:68341110-68341129 | None:intergenic | 15.0% |
| !!! | TACTATTCAATTTTGATTAT+TGG | - | chr5_4:68341220-68341239 | Msa0866580:intron | 15.0% |
| !! | ACTGATGTTATATATATAAA+AGG | - | chr5_4:68342872-68342891 | Msa0866580:intron | 15.0% |
| !! | CTGATGTTATATATATAAAA+GGG | - | chr5_4:68342873-68342892 | Msa0866580:intron | 15.0% |
| !! | TGATGTTATATATATAAAAG+GGG | - | chr5_4:68342874-68342893 | Msa0866580:intron | 15.0% |
| !!! | TTTTTACTTAAAATCAATAC+CGG | + | chr5_4:68343747-68343766 | None:intergenic | 15.0% |
| !! | GTACAAATTATCAATTTATT+TGG | + | chr5_4:68345973-68345992 | None:intergenic | 15.0% |
| !!! | AATGATCAAATATATTTTGT+AGG | + | chr5_4:68346554-68346573 | None:intergenic | 15.0% |
| !!! | TATCAATTGATTATTGATTG+TGG | + | chr5_4:68339920-68339939 | None:intergenic | 20.0% |
| !!! | TATATTTCTAAACTACCAAA+TGG | + | chr5_4:68340244-68340263 | None:intergenic | 20.0% |
| !!! | ATTTGGTAGTTTAGAAATAT+AGG | - | chr5_4:68340243-68340262 | Msa0866580:CDS | 20.0% |
| !!! | TTTGGTAGTTTAGAAATATA+GGG | - | chr5_4:68340244-68340263 | Msa0866580:CDS | 20.0% |
| !! | TTGTAGATAGTAAAAAATAG+CGG | - | chr5_4:68340353-68340372 | Msa0866580:CDS | 20.0% |
| !! | TTTAACAATACTAGACTATT+CGG | - | chr5_4:68340483-68340502 | Msa0866580:CDS | 20.0% |
| !! | CAATTTCTTTAATCTAGAAA+AGG | + | chr5_4:68341587-68341606 | None:intergenic | 20.0% |
| !!! | TAACCATTAATTTGATCTAA+TGG | + | chr5_4:68343590-68343609 | None:intergenic | 20.0% |
| !! | AGATTAGAAGAAATCTTAAT+GGG | + | chr5_4:68343108-68343127 | None:intergenic | 20.0% |
| !! | TCCTAAATTATGTTGAAAAA+TGG | - | chr5_4:68343209-68343228 | Msa0866580:CDS | 20.0% |
| !!! | TCCATTTTTCAACATAATTT+AGG | + | chr5_4:68343213-68343232 | None:intergenic | 20.0% |
| !!! | ACGCTTTTAAAAAATATTGA+AGG | - | chr5_4:68343485-68343504 | Msa0866580:CDS | 20.0% |
| !!! | CGCTTTTAAAAAATATTGAA+GGG | - | chr5_4:68343486-68343505 | Msa0866580:CDS | 20.0% |
| !! | ATTAGATCAAATTAATGGTT+AGG | + | chr5_4:68342952-68342971 | None:intergenic | 20.0% |
| !!! | TAACCATTAATTTGATCTAA+TGG | - | chr5_4:68343590-68343609 | Msa0866580:intron | 20.0% |
| !! | ATTAATTGATATTGTTTAGC+TGG | - | chr5_4:68343674-68343693 | Msa0866580:CDS | 20.0% |
| !!! | TTTTACTTAAAATCAATACC+GGG | + | chr5_4:68343746-68343765 | None:intergenic | 20.0% |
| !! | TTAACTAAGAGTCTTAATTA+GGG | - | chr5_4:68343967-68343986 | Msa0866580:intron | 20.0% |
| !!! | TGAGCAAAAATAATTCATTT+TGG | - | chr5_4:68344168-68344187 | Msa0866580:intron | 20.0% |
| !!! | TCCTTTTAATTATTGAATGT+TGG | - | chr5_4:68344755-68344774 | Msa0866580:intron | 20.0% |
| !! | TCCAACATTCAATAATTAAA+AGG | + | chr5_4:68344759-68344778 | None:intergenic | 20.0% |
| !! | ATTTACATCTAAATGACTAA+TGG | + | chr5_4:68345037-68345056 | None:intergenic | 20.0% |
| !!! | TTTTTCCTCTGTATTTTTTA+TGG | + | chr5_4:68345399-68345418 | None:intergenic | 20.0% |
| !!! | AATTTTTCCTCTATATATCT+AGG | + | chr5_4:68345541-68345560 | None:intergenic | 20.0% |
| !!! | TACACGTTAAAATGTTATTT+AGG | + | chr5_4:68345736-68345755 | None:intergenic | 20.0% |
| !! | GAACATATAATAAATGCAAA+GGG | + | chr5_4:68346836-68346855 | None:intergenic | 20.0% |
| !! | TGAACATATAATAAATGCAA+AGG | + | chr5_4:68346837-68346856 | None:intergenic | 20.0% |
| !! | ATTTATTATATGTTCAATCC+TGG | - | chr5_4:68346841-68346860 | Msa0866580:intron | 20.0% |
| !! | TTTATTATATGTTCAATCCT+GGG | - | chr5_4:68346842-68346861 | Msa0866580:intron | 20.0% |
| !! | TTAAGATGTAATTCATTTGA+CGG | - | chr5_4:68346903-68346922 | Msa0866580:intron | 20.0% |
| !!! | TTGTTTAAATTTGATTTCAG+TGG | + | chr5_4:68347649-68347668 | None:intergenic | 20.0% |
| !! | ACTGAAATCAAATTTAAACA+AGG | - | chr5_4:68347648-68347667 | Msa0866580:intron | 20.0% |
| ! | TCAAAATTTGCAATACTACT+TGG | - | chr5_4:68340730-68340749 | Msa0866580:CDS | 25.0% |
| ! | ATCAAAATTGAATAGTACCA+AGG | + | chr5_4:68341217-68341236 | None:intergenic | 25.0% |
| !! | TGAAATTTTATGCTAGTGAT+GGG | + | chr5_4:68341397-68341416 | None:intergenic | 25.0% |
| !! | ATGAAATTTTATGCTAGTGA+TGG | + | chr5_4:68341398-68341417 | None:intergenic | 25.0% |
| ! | TTGTAAACCTGATTTAATGA+TGG | - | chr5_4:68341511-68341530 | Msa0866580:intron | 25.0% |
| !! | TAAGTGCTCTATCTTTTAAT+TGG | - | chr5_4:68341864-68341883 | Msa0866580:intron | 25.0% |
| !!! | CATTATCATTTTTGCAGTAT+GGG | - | chr5_4:68341969-68341988 | Msa0866580:intron | 25.0% |
| !!! | ATTATCATTTTTGCAGTATG+GGG | - | chr5_4:68341970-68341989 | Msa0866580:intron | 25.0% |
| !!! | TTTTCAGGTTATTTAGCAAT+CGG | - | chr5_4:68342029-68342048 | Msa0866580:intron | 25.0% |
| ! | GTTCAAATTGATGAATTGTT+TGG | - | chr5_4:68342474-68342493 | Msa0866580:intron | 25.0% |
| ! | CCTAGTTAATTAAGCTATTT+CGG | - | chr5_4:68342512-68342531 | Msa0866580:intron | 25.0% |
| !! | CTAGTTAATTAAGCTATTTC+GGG | - | chr5_4:68342513-68342532 | Msa0866580:intron | 25.0% |
| ! | AAATAATAGACAATCGGATA+AGG | + | chr5_4:68342564-68342583 | None:intergenic | 25.0% |
| ! | GCAGTTAGACAAAAAAAAAT+AGG | + | chr5_4:68342602-68342621 | None:intergenic | 25.0% |
| ! | GCTAAAATAATGATGTATCT+TGG | + | chr5_4:68342667-68342686 | None:intergenic | 25.0% |
| ! | TAGCCATTAGATCAAATTAA+TGG | - | chr5_4:68342947-68342966 | Msa0866580:CDS | 25.0% |
| !! | TACTGAAGATGGTAAATTTT+GGG | + | chr5_4:68343075-68343094 | None:intergenic | 25.0% |
| !! | TTACTGAAGATGGTAAATTT+TGG | + | chr5_4:68343076-68343095 | None:intergenic | 25.0% |
| ! | GAGATTAGAAGAAATCTTAA+TGG | + | chr5_4:68343109-68343128 | None:intergenic | 25.0% |
| ! | ATAATTAGTCAAATGGAGAA+AGG | + | chr5_4:68343137-68343156 | None:intergenic | 25.0% |
| !!! | ACTTGATTGCTACTTTTTTT+TGG | + | chr5_4:68343436-68343455 | None:intergenic | 25.0% |
| ! | AAGCCATTAGATCAAATTAA+TGG | + | chr5_4:68343596-68343615 | None:intergenic | 25.0% |
| ! | TAAAAGTTGTGCAATATAGT+TGG | - | chr5_4:68343700-68343719 | Msa0866580:CDS | 25.0% |
| ! | CATTATATGCATGTAATTTC+AGG | + | chr5_4:68343838-68343857 | None:intergenic | 25.0% |
| !!! | TTCAATGTCCTTTTTTTCTA+TGG | - | chr5_4:68343870-68343889 | Msa0866580:intron | 25.0% |
| !! | AACTTGTTCCATAGAAAAAA+AGG | + | chr5_4:68343881-68343900 | None:intergenic | 25.0% |
| ! | GTTAACTAAGAGTCTTAATT+AGG | - | chr5_4:68343966-68343985 | Msa0866580:intron | 25.0% |
| !!! | AAGTAATGGTGTTTTTGTTT+AGG | - | chr5_4:68344028-68344047 | Msa0866580:intron | 25.0% |
| ! | CAATCAAGTCATATTAATCT+TGG | + | chr5_4:68344066-68344085 | None:intergenic | 25.0% |
| !!! | TTATTTTTGCTCATATACCT+GGG | + | chr5_4:68344161-68344180 | None:intergenic | 25.0% |
| !!! | ATTATTTTTGCTCATATACC+TGG | + | chr5_4:68344162-68344181 | None:intergenic | 25.0% |
| ! | AGATAACAATTGTAGAAACA+TGG | - | chr5_4:68344256-68344275 | Msa0866580:intron | 25.0% |
| !!! | AATTATCTGTTTTTGTCAGA+TGG | - | chr5_4:68344348-68344367 | Msa0866580:intron | 25.0% |
| !!! | ATTATCTGTTTTTGTCAGAT+GGG | - | chr5_4:68344349-68344368 | Msa0866580:intron | 25.0% |
| ! | TTGTTAAGTACAACAGAATT+GGG | + | chr5_4:68344549-68344568 | None:intergenic | 25.0% |
| ! | ATTGTTAAGTACAACAGAAT+TGG | + | chr5_4:68344550-68344569 | None:intergenic | 25.0% |
| !! | ATATTTTTCCCAATGACAAA+TGG | - | chr5_4:68345120-68345139 | Msa0866580:intron | 25.0% |
| ! | AACATATCCTAGATATATAG+AGG | - | chr5_4:68345531-68345550 | Msa0866580:intron | 25.0% |
| !! | TAGCACATTGATGATAATAT+GGG | + | chr5_4:68346230-68346249 | None:intergenic | 25.0% |
| !! | ATAGCACATTGATGATAATA+TGG | + | chr5_4:68346231-68346250 | None:intergenic | 25.0% |
| ! | CAAATATTCTTCAAAATGTG+AGG | + | chr5_4:68346338-68346357 | None:intergenic | 25.0% |
| ! | TGAAGAATATTTGTGTGTTA+AGG | - | chr5_4:68346345-68346364 | Msa0866580:intron | 25.0% |
| ! | GTAAGAATACTTCTTATCTA+TGG | - | chr5_4:68346367-68346386 | Msa0866580:CDS | 25.0% |
| ! | AATAGAACTCATTAGTAATC+AGG | - | chr5_4:68346576-68346595 | Msa0866580:intron | 25.0% |
| !! | TTCTACTGATTAATACTAGA+CGG | + | chr5_4:68346677-68346696 | None:intergenic | 25.0% |
| ! | TAGTATTAATCAGTAGAAGA+TGG | - | chr5_4:68346679-68346698 | Msa0866580:intron | 25.0% |
| !! | ATCAATGACTGCAATTTTAT+GGG | + | chr5_4:68346790-68346809 | None:intergenic | 25.0% |
| ! | ATATAATAAATGCAAAGGGT+TGG | + | chr5_4:68346832-68346851 | None:intergenic | 25.0% |
| ! | TGTTGTTAAAATCCAATAGA+TGG | + | chr5_4:68347226-68347245 | None:intergenic | 25.0% |
| !!! | ATCTATTGGATTTTAACAAC+AGG | - | chr5_4:68347225-68347244 | Msa0866580:intron | 25.0% |
| !! | AATCAATCACTAATAATGGA+CGG | + | chr5_4:68347405-68347424 | None:intergenic | 25.0% |
| ! | TGATAAAATGAAAAGTCGAT+CGG | - | chr5_4:68347447-68347466 | Msa0866580:five_prime_UTR | 25.0% |
| ! | AGAAATCCATGATAGTAAAT+TGG | + | chr5_4:68348325-68348344 | None:intergenic | 25.0% |
| CAAAAATCCATTGTTGTGTT+AGG | - | chr5_4:68340030-68340049 | Msa0866580:three_prime_UTR | 30.0% | |
| ATAACGAATGTGACATGAAT+TGG | + | chr5_4:68340152-68340171 | None:intergenic | 30.0% | |
| ! | GTTGATGAAATTGTTCCATT+TGG | - | chr5_4:68340226-68340245 | Msa0866580:CDS | 30.0% |
| ACTTTGTCAATCTTTCAACT+CGG | + | chr5_4:68340657-68340676 | None:intergenic | 30.0% | |
| !!! | CACTTTTTTTTACCACTTCA+TGG | - | chr5_4:68340910-68340929 | Msa0866580:CDS | 30.0% |
| !! | TTTTAAGAACATACCGAAAC+TGG | + | chr5_4:68340994-68341013 | None:intergenic | 30.0% |
| CTGTTAATTCAACGTGTAAT+TGG | - | chr5_4:68341040-68341059 | Msa0866580:intron | 30.0% | |
| AATTTGAATTACAGACTTCG+TGG | - | chr5_4:68341120-68341139 | Msa0866580:intron | 30.0% | |
| !!! | CTTCGTGGTACTTTTTTTAT+AGG | - | chr5_4:68341135-68341154 | Msa0866580:intron | 30.0% |
| ! | AGTTTTCAGTTTTCAAAGTC+TGG | - | chr5_4:68341188-68341207 | Msa0866580:intron | 30.0% |
| ATGTGCAGCTGATATAATAT+TGG | - | chr5_4:68341310-68341329 | Msa0866580:intron | 30.0% | |
| TGTGCAGCTGATATAATATT+GGG | - | chr5_4:68341311-68341330 | Msa0866580:intron | 30.0% | |
| CCTGACAATATTATAGATAC+TGG | + | chr5_4:68341470-68341489 | None:intergenic | 30.0% | |
| CCAGTATCTATAATATTGTC+AGG | - | chr5_4:68341467-68341486 | Msa0866580:intron | 30.0% | |
| CATTCAACCATCATTAAATC+AGG | + | chr5_4:68341521-68341540 | None:intergenic | 30.0% | |
| ! | TGCAAAAATGATAATGCCAA+CGG | + | chr5_4:68341965-68341984 | None:intergenic | 30.0% |
| !! | GCATTATCATTTTTGCAGTA+TGG | - | chr5_4:68341968-68341987 | Msa0866580:intron | 30.0% |
| TGAAGTTACTATGTAATGAG+TGG | + | chr5_4:68342160-68342179 | None:intergenic | 30.0% | |
| ! | CTTTTGCCTATTGTTTATCA+AGG | - | chr5_4:68342421-68342440 | Msa0866580:intron | 30.0% |
| !! | TATTCTGAAGTTAAGGAAAC+AGG | + | chr5_4:68342451-68342470 | None:intergenic | 30.0% |
| !! | GAACAGATATTCTGAAGTTA+AGG | + | chr5_4:68342458-68342477 | None:intergenic | 30.0% |
| CCGAAATAGCTTAATTAACT+AGG | + | chr5_4:68342515-68342534 | None:intergenic | 30.0% | |
| !!! | TCATTATTTTAGCATGCTTG+AGG | - | chr5_4:68342674-68342693 | Msa0866580:intron | 30.0% |
| AAATTGGATCCAAAGATTTG+GGG | + | chr5_4:68342705-68342724 | None:intergenic | 30.0% | |
| CAAATTGGATCCAAAGATTT+GGG | + | chr5_4:68342706-68342725 | None:intergenic | 30.0% | |
| ! | AGCACACAACAATTAGTTTA+CGG | + | chr5_4:68342751-68342770 | None:intergenic | 30.0% |
| ! | GGTACCTTTTCTATATGTTA+AGG | - | chr5_4:68342847-68342866 | Msa0866580:intron | 30.0% |
| GTTGCCTTAACATATAGAAA+AGG | + | chr5_4:68342854-68342873 | None:intergenic | 30.0% | |
| AAGAGTAGTTAAAATGAGAG+AGG | - | chr5_4:68342910-68342929 | Msa0866580:CDS | 30.0% | |
| CACAGTCATAATTAGTCAAA+TGG | + | chr5_4:68343144-68343163 | None:intergenic | 30.0% | |
| ! | TAATGGACACAAGGAAAAAA+GGG | + | chr5_4:68343247-68343266 | None:intergenic | 30.0% |
| ! | TTAATGGACACAAGGAAAAA+AGG | + | chr5_4:68343248-68343267 | None:intergenic | 30.0% |
| CGGATTATATGTACGATTAA+TGG | + | chr5_4:68343264-68343283 | None:intergenic | 30.0% | |
| !! | TTCAATCACACATTTGTTGT+CGG | - | chr5_4:68343314-68343333 | Msa0866580:intron | 30.0% |
| AATGCGAGGAAAAAAATCAT+AGG | - | chr5_4:68343514-68343533 | Msa0866580:CDS | 30.0% | |
| TAGTTAAAATGAGAGATGAG+AGG | + | chr5_4:68343628-68343647 | None:intergenic | 30.0% | |
| !!! | TTTTGGCTTATAATTGAGAC+CGG | - | chr5_4:68344002-68344021 | Msa0866580:intron | 30.0% |
| AAAAACACCATTACTTCATC+CGG | + | chr5_4:68344024-68344043 | None:intergenic | 30.0% | |
| AATTGCTTGTTTATTAGCTG+TGG | - | chr5_4:68344288-68344307 | Msa0866580:intron | 30.0% | |
| !!! | TGCTGCTTTTTCATTGTTTA+TGG | - | chr5_4:68344414-68344433 | Msa0866580:intron | 30.0% |
| TTCATTGTTTATGGAATTGC+TGG | - | chr5_4:68344423-68344442 | Msa0866580:intron | 30.0% | |
| TCATTGTTTATGGAATTGCT+GGG | - | chr5_4:68344424-68344443 | Msa0866580:intron | 30.0% | |
| AATAAGTTCCACAATATCAC+AGG | + | chr5_4:68344587-68344606 | None:intergenic | 30.0% | |
| ATCCATTCATTTACCACAAA+AGG | + | chr5_4:68344678-68344697 | None:intergenic | 30.0% | |
| TTCACTGTAAATTTGTGGTT+TGG | + | chr5_4:68344961-68344980 | None:intergenic | 30.0% | |
| CAACATTCACTGTAAATTTG+TGG | + | chr5_4:68344966-68344985 | None:intergenic | 30.0% | |
| AATTTACAGTGAATGTTGTG+CGG | - | chr5_4:68344968-68344987 | Msa0866580:intron | 30.0% | |
| GCATTAAACCATTTGTCATT+GGG | + | chr5_4:68345131-68345150 | None:intergenic | 30.0% | |
| AGCATTAAACCATTTGTCAT+TGG | + | chr5_4:68345132-68345151 | None:intergenic | 30.0% | |
| TTGCACCATAAAAAATACAG+AGG | - | chr5_4:68345391-68345410 | Msa0866580:intron | 30.0% | |
| CTACAATCTAAACAAACAGA+AGG | + | chr5_4:68345424-68345443 | None:intergenic | 30.0% | |
| TACCACAATCTAAACAAACA+GGG | + | chr5_4:68345566-68345585 | None:intergenic | 30.0% | |
| ACTGTATTCACTACCAAAAT+AGG | - | chr5_4:68345894-68345913 | Msa0866580:intron | 30.0% | |
| CTGTATTCACTACCAAAATA+GGG | - | chr5_4:68345895-68345914 | Msa0866580:intron | 30.0% | |
| ! | ATGTAGAATCTACCCTATTT+TGG | + | chr5_4:68345910-68345929 | None:intergenic | 30.0% |
| AGTAGATTCACACGTAATTA+AGG | + | chr5_4:68346083-68346102 | None:intergenic | 30.0% | |
| GAACAAAAAAAGAAACGTAC+AGG | + | chr5_4:68346134-68346153 | None:intergenic | 30.0% | |
| AATGTGAATCAAAGAGTTGT+TGG | - | chr5_4:68346450-68346469 | Msa0866580:CDS | 30.0% | |
| !!! | GAGAAGTACTTGTTTTTATG+TGG | + | chr5_4:68346501-68346520 | None:intergenic | 30.0% |
| ! | ACACTAGAAAGTTGATTGTA+AGG | + | chr5_4:68346633-68346652 | None:intergenic | 30.0% |
| ! | TCTACTGATTAATACTAGAC+GGG | + | chr5_4:68346676-68346695 | None:intergenic | 30.0% |
| ! | TCATATTTGTAGGTTGGATT+TGG | - | chr5_4:68346725-68346744 | Msa0866580:intron | 30.0% |
| AATGGCTATAACTCATTCAA+AGG | + | chr5_4:68346753-68346772 | None:intergenic | 30.0% | |
| ! | CATCAATGACTGCAATTTTA+TGG | + | chr5_4:68346791-68346810 | None:intergenic | 30.0% |
| CATAAAATTGCAGTCATTGA+TGG | - | chr5_4:68346789-68346808 | Msa0866580:intron | 30.0% | |
| TTGATGTGCATTTGAACTTA+AGG | - | chr5_4:68346870-68346889 | Msa0866580:intron | 30.0% | |
| CATTTGAACTTAAGGACTTA+AGG | - | chr5_4:68346878-68346897 | Msa0866580:intron | 30.0% | |
| AACTTTCAAGCATCTGATAT+CGG | + | chr5_4:68346954-68346973 | None:intergenic | 30.0% | |
| AGAGGTTGTTTACTTCTTTA+TGG | + | chr5_4:68347000-68347019 | None:intergenic | 30.0% | |
| !! | GCTTCTAGAACACTATAAAT+AGG | + | chr5_4:68347109-68347128 | None:intergenic | 30.0% |
| TCCAAATATGATCTTAGTTC+TGG | - | chr5_4:68347163-68347182 | Msa0866580:intron | 30.0% | |
| !! | TAAGCTGATTTTCCATCTAT+TGG | - | chr5_4:68347211-68347230 | Msa0866580:CDS | 30.0% |
| ACAACAGGAAACTATACTAT+TGG | - | chr5_4:68347240-68347259 | Msa0866580:intron | 30.0% | |
| ! | ATCAGCATATATTTTCTGCA+GGG | + | chr5_4:68347320-68347339 | None:intergenic | 30.0% |
| GGTGAATCAATCACTAATAA+TGG | + | chr5_4:68347409-68347428 | None:intergenic | 30.0% | |
| TGATACTAAGACAGATGATA+AGG | - | chr5_4:68347519-68347538 | Msa0866580:intron | 30.0% | |
| AAATTTAAACAAGGCAAACG+TGG | - | chr5_4:68347657-68347676 | Msa0866580:intron | 30.0% | |
| TGTAGATAATTCAACCATGA+AGG | - | chr5_4:68347729-68347748 | Msa0866580:intron | 30.0% | |
| !! | GTTTTTAATTGTTTGACCCT+TGG | + | chr5_4:68347773-68347792 | None:intergenic | 30.0% |
| ! | TTTTGTTGGCATATTTCCAT+TGG | + | chr5_4:68347857-68347876 | None:intergenic | 30.0% |
| ACTATATTCTCTTCAAGAAC+AGG | + | chr5_4:68347913-68347932 | None:intergenic | 30.0% | |
| CTTGAAGAGAATATAGTTCT+AGG | - | chr5_4:68347916-68347935 | Msa0866580:intron | 30.0% | |
| AGTTATCAGTGAGTTTAACT+AGG | - | chr5_4:68348106-68348125 | Msa0866580:five_prime_UTR | 30.0% | |
| TTAACTAGGTAGTTGTTTGA+AGG | - | chr5_4:68348120-68348139 | Msa0866580:five_prime_UTR | 30.0% | |
| TATATACAGCTTCTCAATGA+TGG | + | chr5_4:68348194-68348213 | None:intergenic | 30.0% | |
| ATACTGCCAATTTACTATCA+TGG | - | chr5_4:68348316-68348335 | Msa0866580:five_prime_UTR | 30.0% | |
| TTTGTCTATCTGCTTATACG+AGG | + | chr5_4:68340014-68340033 | None:intergenic | 35.0% | |
| TTTGTGACCTAACACAACAA+TGG | + | chr5_4:68340040-68340059 | None:intergenic | 35.0% | |
| ! | AACTAGCTCTTGAATCTTGA+TGG | + | chr5_4:68340531-68340550 | None:intergenic | 35.0% |
| ! | AGAGCTAGTTTCAGATATTC+CGG | - | chr5_4:68340541-68340560 | Msa0866580:CDS | 35.0% |
| TTTCAGATATTCCGGAGTTA+AGG | - | chr5_4:68340549-68340568 | Msa0866580:CDS | 35.0% | |
| ! | ATGAAGCATCACAAAGGTTA+AGG | + | chr5_4:68340601-68340620 | None:intergenic | 35.0% |
| ! | AATCACATGAAGCATCACAA+AGG | + | chr5_4:68340607-68340626 | None:intergenic | 35.0% |
| ! | ATTAATATCAGTGTTGCTGC+AGG | - | chr5_4:68340628-68340647 | Msa0866580:CDS | 35.0% |
| ACAACAGTCTGTACTCTATA+GGG | + | chr5_4:68340698-68340717 | None:intergenic | 35.0% | |
| ACAATAATAATGGCTCTTCC+TGG | - | chr5_4:68340767-68340786 | Msa0866580:CDS | 35.0% | |
| !! | CTGAATGTATTTCTAGTACC+CGG | + | chr5_4:68340850-68340869 | None:intergenic | 35.0% |
| TACGTTCTTTGTTCAGGTAT+TGG | - | chr5_4:68340873-68340892 | Msa0866580:CDS | 35.0% | |
| ! | TTTTCAAAGTCTGGATTCCT+TGG | - | chr5_4:68341197-68341216 | Msa0866580:intron | 35.0% |
| GCTGATATAATATTGGGTCT+TGG | - | chr5_4:68341317-68341336 | Msa0866580:intron | 35.0% | |
| !! | TTATGCTAGTGATGGGTTAA+TGG | + | chr5_4:68341390-68341409 | None:intergenic | 35.0% |
| AACACCTCCATCATATAAAC+AGG | - | chr5_4:68341689-68341708 | Msa0866580:intron | 35.0% | |
| TTGACCTGTTTATATGATGG+AGG | + | chr5_4:68341696-68341715 | None:intergenic | 35.0% | |
| !!! | TGTCATTGTTTTTTAGTGCC+AGG | - | chr5_4:68341751-68341770 | Msa0866580:intron | 35.0% |
| ACTTAAATTTGTGCGCTTGA+TGG | + | chr5_4:68341849-68341868 | None:intergenic | 35.0% | |
| GGAATCAACTTTACAATGAC+TGG | + | chr5_4:68341940-68341959 | None:intergenic | 35.0% | |
| ! | AAAAATGATAATGCCAACGG+CGG | + | chr5_4:68341962-68341981 | None:intergenic | 35.0% |
| ! | TCCTTGTCTGAAACATCAAT+GGG | + | chr5_4:68342002-68342021 | None:intergenic | 35.0% |
| ! | TTCCTTGTCTGAAACATCAA+TGG | + | chr5_4:68342003-68342022 | None:intergenic | 35.0% |
| !!! | GACAAGGAAACTGTTTTTTC+AGG | - | chr5_4:68342014-68342033 | Msa0866580:intron | 35.0% |
| TGCAGAAGAGTGATAATAGT+TGG | - | chr5_4:68342124-68342143 | Msa0866580:intron | 35.0% | |
| GTGAAACCTGCAAATAAGTA+CGG | + | chr5_4:68342214-68342233 | None:intergenic | 35.0% | |
| ! | TAAATCATTGTCGACTGTAG+TGG | - | chr5_4:68342398-68342417 | Msa0866580:intron | 35.0% |
| GGCATACCTTGATAAACAAT+AGG | + | chr5_4:68342430-68342449 | None:intergenic | 35.0% | |
| GCAAATTGGATCCAAAGATT+TGG | + | chr5_4:68342707-68342726 | None:intergenic | 35.0% | |
| AACTACTCTTCTCACTTGAT+AGG | + | chr5_4:68342900-68342919 | None:intergenic | 35.0% | |
| TAGTTAAAATGAGAGAGGAG+AGG | - | chr5_4:68342915-68342934 | Msa0866580:CDS | 35.0% | |
| AGTTAAAATGAGAGAGGAGA+GGG | - | chr5_4:68342916-68342935 | Msa0866580:CDS | 35.0% | |
| ! | TGAAGATGGTAAATTTTGGG+CGG | + | chr5_4:68343072-68343091 | None:intergenic | 35.0% |
| TTTACCATCTTCAGTAAGCA+AGG | - | chr5_4:68343079-68343098 | Msa0866580:intron | 35.0% | |
| TTACCATCTTCAGTAAGCAA+GGG | - | chr5_4:68343080-68343099 | Msa0866580:intron | 35.0% | |
| ! | ATGTACGATTAATGGACACA+AGG | + | chr5_4:68343256-68343275 | None:intergenic | 35.0% |
| TGTTCGTTAGTTGCAACAAA+GGG | + | chr5_4:68343342-68343361 | None:intergenic | 35.0% | |
| ! | AAGTTGTGACCTTTTCATCA+GGG | + | chr5_4:68343372-68343391 | None:intergenic | 35.0% |
| ! | AAAGTTGTGACCTTTTCATC+AGG | + | chr5_4:68343373-68343392 | None:intergenic | 35.0% |
| TGATGAAAAGGTCACAACTT+TGG | - | chr5_4:68343372-68343391 | Msa0866580:intron | 35.0% | |
| GATGAAAAGGTCACAACTTT+GGG | - | chr5_4:68343373-68343392 | Msa0866580:intron | 35.0% | |
| ATGAAAAGGTCACAACTTTG+GGG | - | chr5_4:68343374-68343393 | Msa0866580:intron | 35.0% | |
| GCAATCAAGTCATATGATCT+TGG | - | chr5_4:68343446-68343465 | Msa0866580:CDS | 35.0% | |
| TCAAGTCATATGATCTTGGT+TGG | - | chr5_4:68343450-68343469 | Msa0866580:CDS | 35.0% | |
| CAAGTCATATGATCTTGGTT+GGG | - | chr5_4:68343451-68343470 | Msa0866580:CDS | 35.0% | |
| AGGAATGATGTCATTGAACA+TGG | + | chr5_4:68343818-68343837 | None:intergenic | 35.0% | |
| TTCTATGGAACAAGTTCTCA+TGG | - | chr5_4:68343885-68343904 | Msa0866580:intron | 35.0% | |
| GTCTTAATTAGGGTGACTTT+AGG | - | chr5_4:68343977-68343996 | Msa0866580:intron | 35.0% | |
| ! | TAGGGTGACTTTAGGTATTT+TGG | - | chr5_4:68343985-68344004 | Msa0866580:intron | 35.0% |
| ! | GAAAGAAAAGCATGTAGAAC+TGG | - | chr5_4:68344107-68344126 | Msa0866580:intron | 35.0% |
| TATAATATATGACAGCTCCC+AGG | - | chr5_4:68344141-68344160 | Msa0866580:intron | 35.0% | |
| GATGCATTATAGAAGACTAG+TGG | - | chr5_4:68344211-68344230 | Msa0866580:intron | 35.0% | |
| TGGTTCAATTTCATACGTCT+TGG | - | chr5_4:68344308-68344327 | Msa0866580:intron | 35.0% | |
| AAGCTGTTTATTCTGCAGTA+TGG | - | chr5_4:68344389-68344408 | Msa0866580:intron | 35.0% | |
| ! | GACCTTTTGTGGTAAATGAA+TGG | - | chr5_4:68344673-68344692 | Msa0866580:intron | 35.0% |
| TGGATTCAAACGAAGATTGA+AGG | - | chr5_4:68344693-68344712 | Msa0866580:intron | 35.0% | |
| AACGAAGATTGAAGGATATG+AGG | - | chr5_4:68344701-68344720 | Msa0866580:intron | 35.0% | |
| !!! | GATTTTGAGTTCTCTCAGTA+AGG | - | chr5_4:68344854-68344873 | Msa0866580:intron | 35.0% |
| TCTTCACCTCGTATAATTGT+TGG | + | chr5_4:68344919-68344938 | None:intergenic | 35.0% | |
| ACCTCACTCAAAAAACACAT+TGG | - | chr5_4:68344992-68345011 | Msa0866580:intron | 35.0% | |
| !!! | TCCAATGTGTTTTTTGAGTG+AGG | + | chr5_4:68344996-68345015 | None:intergenic | 35.0% |
| TAAATGACTAATGGCTAGGT+GGG | + | chr5_4:68345028-68345047 | None:intergenic | 35.0% | |
| CATCTAAATGACTAATGGCT+AGG | + | chr5_4:68345032-68345051 | None:intergenic | 35.0% | |
| CAACATAAACCCTGAAAATC+AGG | - | chr5_4:68345242-68345261 | Msa0866580:intron | 35.0% | |
| ATGATTCCGTGCTAAATTAC+AGG | - | chr5_4:68345307-68345326 | Msa0866580:intron | 35.0% | |
| TGATTCCGTGCTAAATTACA+GGG | - | chr5_4:68345308-68345327 | Msa0866580:intron | 35.0% | |
| GGCTAACAACTTCTATAAAG+AGG | + | chr5_4:68345361-68345380 | None:intergenic | 35.0% | |
| ATATACACGTAATTCTGTCC+TGG | + | chr5_4:68345459-68345478 | None:intergenic | 35.0% | |
| ACCACAATCTAAACAAACAG+GGG | + | chr5_4:68345565-68345584 | None:intergenic | 35.0% | |
| CTACCACAATCTAAACAAAC+AGG | + | chr5_4:68345567-68345586 | None:intergenic | 35.0% | |
| ATATACACGTAATTCTGTCC+TGG | + | chr5_4:68345459-68345478 | None:intergenic | 35.0% | |
| CATTACACGTGATTCTATCT+AGG | + | chr5_4:68345681-68345700 | None:intergenic | 35.0% | |
| ACTGTGTACAATACACCAAA+TGG | - | chr5_4:68345763-68345782 | Msa0866580:CDS | 35.0% | |
| TGTACAATACACCAAATGGT+GGG | - | chr5_4:68345767-68345786 | Msa0866580:CDS | 35.0% | |
| ACATCATATTCGTACAACAG+AGG | - | chr5_4:68346035-68346054 | Msa0866580:intron | 35.0% | |
| TGAAATGTGGGTACACAAAT+CGG | + | chr5_4:68346165-68346184 | None:intergenic | 35.0% | |
| TGATTGTAAGGTTCAATGAG+TGG | + | chr5_4:68346621-68346640 | None:intergenic | 35.0% | |
| GATGACTGCTTCATATTTGT+AGG | - | chr5_4:68346715-68346734 | Msa0866580:intron | 35.0% | |
| ACTGCTTCATATTTGTAGGT+TGG | - | chr5_4:68346719-68346738 | Msa0866580:intron | 35.0% | |
| !!! | TGGGTTGGTTTTTCTATCAA+TGG | + | chr5_4:68346771-68346790 | None:intergenic | 35.0% |
| ! | ATGACTGCAATTTTATGGGT+TGG | + | chr5_4:68346786-68346805 | None:intergenic | 35.0% |
| ! | AGTCATTGATGGTTCAAGAT+CGG | - | chr5_4:68346800-68346819 | Msa0866580:intron | 35.0% |
| GCCAGAACTAAGATCATATT+TGG | + | chr5_4:68347167-68347186 | None:intergenic | 35.0% | |
| CAGCAGTTTATATTTGCTCA+AGG | - | chr5_4:68347186-68347205 | Msa0866580:CDS | 35.0% | |
| ! | CATATATTTTCTGCAGGGTA+CGG | + | chr5_4:68347315-68347334 | None:intergenic | 35.0% |
| ! | CATCAGCATATATTTTCTGC+AGG | + | chr5_4:68347321-68347340 | None:intergenic | 35.0% |
| !! | AATAATGGACGGTTAGATAC+TGG | + | chr5_4:68347394-68347413 | None:intergenic | 35.0% |
| TCATCTGCATTGTTCTTGTA+AGG | + | chr5_4:68347430-68347449 | None:intergenic | 35.0% | |
| GATGATAAGGTTGAACCAAT+CGG | - | chr5_4:68347532-68347551 | Msa0866580:intron | 35.0% | |
| AACTCAAGATGAATCTGATG+TGG | - | chr5_4:68347579-68347598 | Msa0866580:intron | 35.0% | |
| TTCGAAGTAGAAGACATTTC+CGG | + | chr5_4:68347688-68347707 | None:intergenic | 35.0% | |
| TACATCCAAACCAGTTACTT+TGG | + | chr5_4:68347713-68347732 | None:intergenic | 35.0% | |
| ATCCATGTCAAACAATCCAA+GGG | - | chr5_4:68347754-68347773 | Msa0866580:intron | 35.0% | |
| AATATGCCAACAAAACAGCA+AGG | - | chr5_4:68347862-68347881 | Msa0866580:intron | 35.0% | |
| !! | TATAGTTCTAGGTGTTGCAT+TGG | - | chr5_4:68347927-68347946 | Msa0866580:intron | 35.0% |
| AAGATTGTAGATGCTACAAG+AGG | - | chr5_4:68348076-68348095 | Msa0866580:intron | 35.0% | |
| TCAGCAGTGTACTTAAAAGT+TGG | + | chr5_4:68348155-68348174 | None:intergenic | 35.0% | |
| ATAAACCTCAAAACCTCTGA+GGG | + | chr5_4:68348242-68348261 | None:intergenic | 35.0% | |
| AATAAACCTCAAAACCTCTG+AGG | + | chr5_4:68348243-68348262 | None:intergenic | 35.0% | |
| ACACGTGGAAATCAAATCCA+TGG | - | chr5_4:68339839-68339858 | Msa0866580:three_prime_UTR | 40.0% | |
| AATCAAATCCATGGCTGACA+CGG | - | chr5_4:68339848-68339867 | Msa0866580:three_prime_UTR | 40.0% | |
| CACGGCAAGATTGAAAATTC+TGG | - | chr5_4:68339866-68339885 | Msa0866580:three_prime_UTR | 40.0% | |
| AGAATTTCGACACTTTCGGT+TGG | - | chr5_4:68339892-68339911 | Msa0866580:three_prime_UTR | 40.0% | |
| GAATTTCGACACTTTCGGTT+GGG | - | chr5_4:68339893-68339912 | Msa0866580:three_prime_UTR | 40.0% | |
| TTGTCGAATAACTGCTGTAG+TGG | + | chr5_4:68340399-68340418 | None:intergenic | 40.0% | |
| AGCTCTTGAATCTTGATGGA+AGG | + | chr5_4:68340527-68340546 | None:intergenic | 40.0% | |
| ACTTCACTAAGCCTTAACTC+CGG | + | chr5_4:68340563-68340582 | None:intergenic | 40.0% | |
| CACAACAGTCTGTACTCTAT+AGG | + | chr5_4:68340699-68340718 | None:intergenic | 40.0% | |
| ACCTCAACAGCAATAAAGAC+CGG | - | chr5_4:68340828-68340847 | Msa0866580:CDS | 40.0% | |
| CAGTTCTACGTTCTTTGTTC+AGG | - | chr5_4:68340867-68340886 | Msa0866580:CDS | 40.0% | |
| ATACCGAAACTGGATAGGAA+GGG | + | chr5_4:68340984-68341003 | None:intergenic | 40.0% | |
| AGAACATACCGAAACTGGAT+AGG | + | chr5_4:68340989-68341008 | None:intergenic | 40.0% | |
| ACATACTACCCTTTGCTGAT+GGG | + | chr5_4:68341294-68341313 | None:intergenic | 40.0% | |
| TCCTGTTTAGCGCAATTGTT+GGG | + | chr5_4:68341358-68341377 | None:intergenic | 40.0% | |
| TTCCTGTTTAGCGCAATTGT+TGG | + | chr5_4:68341359-68341378 | None:intergenic | 40.0% | |
| !! | GTGATGGGTTAATGGATCTT+GGG | + | chr5_4:68341382-68341401 | None:intergenic | 40.0% |
| !! | AGTGATGGGTTAATGGATCT+TGG | + | chr5_4:68341383-68341402 | None:intergenic | 40.0% |
| !! | ATACTGGAAGAGTGCTGAAT+GGG | + | chr5_4:68341454-68341473 | None:intergenic | 40.0% |
| AGTTCATGAAACAGGACTAC+AGG | - | chr5_4:68341659-68341678 | Msa0866580:intron | 40.0% | |
| GTTCATGAAACAGGACTACA+GGG | - | chr5_4:68341660-68341679 | Msa0866580:intron | 40.0% | |
| TTCATGAAACAGGACTACAG+GGG | - | chr5_4:68341661-68341680 | Msa0866580:intron | 40.0% | |
| ! | GCGTTGACCTGTTTATATGA+TGG | + | chr5_4:68341699-68341718 | None:intergenic | 40.0% |
| AATTGCGCTTCCTTCTGTTA+AGG | - | chr5_4:68341780-68341799 | Msa0866580:intron | 40.0% | |
| ! | GCACTAACATACTTTTCTGC+AGG | - | chr5_4:68341890-68341909 | Msa0866580:intron | 40.0% |
| ! | AAAATGATAATGCCAACGGC+GGG | + | chr5_4:68341961-68341980 | None:intergenic | 40.0% |
| ! | ATTTTTGCAGTATGGGGTGT+TGG | - | chr5_4:68341976-68341995 | Msa0866580:intron | 40.0% |
| GCTTCTGTAGGTAGAATTAC+TGG | + | chr5_4:68342342-68342361 | None:intergenic | 40.0% | |
| GGATAAGGCTTCTCATGAAA+GGG | + | chr5_4:68342549-68342568 | None:intergenic | 40.0% | |
| ! | ACAGAATAGGCACTGCAAAT+TGG | + | chr5_4:68342721-68342740 | None:intergenic | 40.0% |
| TTACGGAAGCGAAACAGAAT+AGG | + | chr5_4:68342734-68342753 | None:intergenic | 40.0% | |
| GTTAAAATGAGAGAGGAGAG+GGG | - | chr5_4:68342917-68342936 | Msa0866580:CDS | 40.0% | |
| AGTCAAATGGAGAAAGGACT+AGG | + | chr5_4:68343131-68343150 | None:intergenic | 40.0% | |
| GTGTTCGTTAGTTGCAACAA+AGG | + | chr5_4:68343343-68343362 | None:intergenic | 40.0% | |
| ! | AGTTGTGACCTTTTCATCAG+GGG | + | chr5_4:68343371-68343390 | None:intergenic | 40.0% |
| TGAAAAGGTCACAACTTTGG+GGG | - | chr5_4:68343375-68343394 | Msa0866580:intron | 40.0% | |
| ! | CAACTTTGGGGGAATAAACA+TGG | - | chr5_4:68343386-68343405 | Msa0866580:intron | 40.0% |
| TCATATGATCTTGGTTGGGT+TGG | - | chr5_4:68343455-68343474 | Msa0866580:CDS | 40.0% | |
| GCGAGGAAAAAAATCATAGG+CGG | - | chr5_4:68343517-68343536 | Msa0866580:CDS | 40.0% | |
| TATGGAACAAGTTCTCATGG+AGG | - | chr5_4:68343888-68343907 | Msa0866580:intron | 40.0% | |
| ATGGAACAAGTTCTCATGGA+GGG | - | chr5_4:68343889-68343908 | Msa0866580:intron | 40.0% | |
| ATTGAGACCGGATGAAGTAA+TGG | - | chr5_4:68344014-68344033 | Msa0866580:intron | 40.0% | |
| AAACAGCTTTGCCTGCAAAT+TGG | + | chr5_4:68344378-68344397 | None:intergenic | 40.0% | |
| !!! | ACAGTTTTGTTGACTCTTGC+TGG | - | chr5_4:68344487-68344506 | Msa0866580:intron | 40.0% |
| CGTAGTTACCTGTGATATTG+TGG | - | chr5_4:68344576-68344595 | Msa0866580:intron | 40.0% | |
| CATGAATCATTGCGCTTGAA+AGG | + | chr5_4:68344647-68344666 | None:intergenic | 40.0% | |
| ! | ATTGAAGGATATGAGGTGTC+TGG | - | chr5_4:68344708-68344727 | Msa0866580:intron | 40.0% |
| TGGTCACCAACAATTATACG+AGG | - | chr5_4:68344910-68344929 | Msa0866580:intron | 40.0% | |
| CTAAATGACTAATGGCTAGG+TGG | + | chr5_4:68345029-68345048 | None:intergenic | 40.0% | |
| AGAACATTGTTGCTGACATG+CGG | - | chr5_4:68345157-68345176 | Msa0866580:intron | 40.0% | |
| ! | CTGCTCAACTTGAGGATTTT+TGG | + | chr5_4:68345193-68345212 | None:intergenic | 40.0% |
| CGCTTATGGTATGTATGAAC+TGG | - | chr5_4:68345265-68345284 | Msa0866580:intron | 40.0% | |
| GATTCCGTGCTAAATTACAG+GGG | - | chr5_4:68345309-68345328 | Msa0866580:intron | 40.0% | |
| AAGACCCCTGTAATTTAGCA+CGG | + | chr5_4:68345316-68345335 | None:intergenic | 40.0% | |
| TTATGGTGCAACGATGTTTG+TGG | + | chr5_4:68345382-68345401 | None:intergenic | 40.0% | |
| TTGTAGTAGCTATCAGTACC+AGG | - | chr5_4:68345438-68345457 | Msa0866580:intron | 40.0% | |
| CCACAATCTAAACAAACAGG+GGG | + | chr5_4:68345564-68345583 | None:intergenic | 40.0% | |
| GTGTACAATACACCAAATGG+TGG | - | chr5_4:68345766-68345785 | Msa0866580:CDS | 40.0% | |
| GGCATTTACAATGTAACCTC+AGG | + | chr5_4:68345841-68345860 | None:intergenic | 40.0% | |
| GTTACATTGTAAATGCCGTG+TGG | - | chr5_4:68345844-68345863 | Msa0866580:intron | 40.0% | |
| GATTCACACGTAATTAAGGC+AGG | + | chr5_4:68346079-68346098 | None:intergenic | 40.0% | |
| TGGGTACACAAATCGGATTT+GGG | + | chr5_4:68346158-68346177 | None:intergenic | 40.0% | |
| TTTGTGTACCCACATTTCAC+TGG | - | chr5_4:68346166-68346185 | Msa0866580:CDS | 40.0% | |
| TGTTCCTACCAGTGAAATGT+GGG | + | chr5_4:68346177-68346196 | None:intergenic | 40.0% | |
| ATGTTCCTACCAGTGAAATG+TGG | + | chr5_4:68346178-68346197 | None:intergenic | 40.0% | |
| TTATGAGTTATGACTGCGTG+AGG | + | chr5_4:68346419-68346438 | None:intergenic | 40.0% | |
| ! | GTCATTGATGGTTCAAGATC+GGG | - | chr5_4:68346801-68346820 | Msa0866580:intron | 40.0% |
| AATGCACATCAATAACACCC+AGG | + | chr5_4:68346862-68346881 | None:intergenic | 40.0% | |
| TCAAGCATCTGATATCGGAT+TGG | + | chr5_4:68346949-68346968 | None:intergenic | 40.0% | |
| ! | GCGTGTTCTTGTTTGTTTGT+TGG | - | chr5_4:68347127-68347146 | Msa0866580:intron | 40.0% |
| TTAGAGTTATCAGCCATCAC+CGG | - | chr5_4:68347269-68347288 | Msa0866580:intron | 40.0% | |
| ! | AATATATGCTGATGCCGACT+TGG | - | chr5_4:68347327-68347346 | Msa0866580:intron | 40.0% |
| GTATGGTATGTTGTCCAAGT+CGG | + | chr5_4:68347344-68347363 | None:intergenic | 40.0% | |
| TTGAATGTGGAATCTGCGTA+TGG | + | chr5_4:68347361-68347380 | None:intergenic | 40.0% | |
| TACGCAGATTCCACATTCAA+TGG | - | chr5_4:68347361-68347380 | Msa0866580:CDS | 40.0% | |
| AAGATGACAAGACAACTGTG+CGG | - | chr5_4:68347488-68347507 | Msa0866580:five_prime_UTR | 40.0% | |
| GTTCCTCTAACCTTAGTATC+TGG | + | chr5_4:68347562-68347581 | None:intergenic | 40.0% | |
| AGAGTTAGATGCCATGACTT+TGG | + | chr5_4:68347608-68347627 | None:intergenic | 40.0% | |
| ATGGCATCTAACTCTGATGT+TGG | - | chr5_4:68347613-68347632 | Msa0866580:intron | 40.0% | |
| TTTAAACAAGGCAAACGTGG+AGG | - | chr5_4:68347660-68347679 | Msa0866580:intron | 40.0% | |
| ACTTCGAACTCCAAAGTAAC+TGG | - | chr5_4:68347700-68347719 | Msa0866580:intron | 40.0% | |
| GAACTCCAAAGTAACTGGTT+TGG | - | chr5_4:68347705-68347724 | Msa0866580:intron | 40.0% | |
| TTTGACATGGATGTCCTTCA+TGG | + | chr5_4:68347746-68347765 | None:intergenic | 40.0% | |
| CATCCATGTCAAACAATCCA+AGG | - | chr5_4:68347753-68347772 | Msa0866580:intron | 40.0% | |
| ! | AGATTTTCTGAGTCGACGTT+TGG | + | chr5_4:68347802-68347821 | None:intergenic | 40.0% |
| !! | AACAGCACTGACAAAACCAA+TGG | - | chr5_4:68347838-68347857 | Msa0866580:intron | 40.0% |
| !!! | CTTTCTCCTTGCTGTTTTGT+TGG | + | chr5_4:68347871-68347890 | None:intergenic | 40.0% |
| CAACAAAACAGCAAGGAGAA+AGG | - | chr5_4:68347869-68347888 | Msa0866580:intron | 40.0% | |
| ! | GTGTCGATCTCATCATTGAT+AGG | + | chr5_4:68347973-68347992 | None:intergenic | 40.0% |
| AACTCAAGAGGCAAAGGAAA+TGG | - | chr5_4:68347999-68348018 | Msa0866580:intron | 40.0% | |
| GTAATTCATATACCCCTCAG+AGG | - | chr5_4:68348226-68348245 | Msa0866580:five_prime_UTR | 40.0% | |
| TAAACCTCAAAACCTCTGAG+GGG | + | chr5_4:68348241-68348260 | None:intergenic | 40.0% | |
| GCGCAGAATTTCGACACTTT+CGG | - | chr5_4:68339888-68339907 | Msa0866580:three_prime_UTR | 45.0% | |
| TTCTTTGTCTTCATCGTCGC+AGG | - | chr5_4:68340069-68340088 | Msa0866580:three_prime_UTR | 45.0% | |
| TAACTGCTGTAGTGGCATAG+CGG | + | chr5_4:68340391-68340410 | None:intergenic | 45.0% | |
| ! | GTTAAAGCGCTATAGCGTAG+CGG | + | chr5_4:68340456-68340475 | None:intergenic | 45.0% |
| CCTCAACAGCAATAAAGACC+GGG | - | chr5_4:68340829-68340848 | Msa0866580:CDS | 45.0% | |
| ! | TACCACTTCATGGTTTGCAG+AGG | - | chr5_4:68340920-68340939 | Msa0866580:intron | 45.0% |
| ! | ACCACTTCATGGTTTGCAGA+GGG | - | chr5_4:68340921-68340940 | Msa0866580:intron | 45.0% |
| ! | TCATGGTTTGCAGAGGGTAA+AGG | - | chr5_4:68340927-68340946 | Msa0866580:intron | 45.0% |
| ! | CATGGTTTGCAGAGGGTAAA+GGG | - | chr5_4:68340928-68340947 | Msa0866580:intron | 45.0% |
| ! | ATGGTTTGCAGAGGGTAAAG+GGG | - | chr5_4:68340929-68340948 | Msa0866580:intron | 45.0% |
| ATGCCCTTCCTATCCAGTTT+CGG | - | chr5_4:68340978-68340997 | Msa0866580:intron | 45.0% | |
| CATACCGAAACTGGATAGGA+AGG | + | chr5_4:68340985-68341004 | None:intergenic | 45.0% | |
| TGTGCCAGCGTTGTTGTAAA+CGG | - | chr5_4:68341063-68341082 | Msa0866580:intron | 45.0% | |
| CACATACTACCCTTTGCTGA+TGG | + | chr5_4:68341295-68341314 | None:intergenic | 45.0% | |
| !! | GATACTGGAAGAGTGCTGAA+TGG | + | chr5_4:68341455-68341474 | None:intergenic | 45.0% |
| TCCACTGCAGTTCATGAAAC+AGG | - | chr5_4:68341651-68341670 | Msa0866580:intron | 45.0% | |
| TCCTGTTTCATGAACTGCAG+TGG | + | chr5_4:68341655-68341674 | None:intergenic | 45.0% | |
| GTAGTAGCCACCTTAACAGA+AGG | + | chr5_4:68341793-68341812 | None:intergenic | 45.0% | |
| !! | TGGCTACTACAGTACTGACA+AGG | - | chr5_4:68341803-68341822 | Msa0866580:intron | 45.0% |
| GCCCATTGATGTTTCAGACA+AGG | - | chr5_4:68341998-68342017 | Msa0866580:intron | 45.0% | |
| AAAGTCGTTCCTTAACAGCC+TGG | + | chr5_4:68342368-68342387 | None:intergenic | 45.0% | |
| CGGATAAGGCTTCTCATGAA+AGG | + | chr5_4:68342550-68342569 | None:intergenic | 45.0% | |
| GAGGACTTTCCCCAAATCTT+TGG | - | chr5_4:68342693-68342712 | Msa0866580:intron | 45.0% | |
| GCAAGCGAGACAAGAAATGT+TGG | - | chr5_4:68342826-68342845 | Msa0866580:intron | 45.0% | |
| CGTGTGGAGAGAGATTAGAA+GGG | + | chr5_4:68343006-68343025 | None:intergenic | 45.0% | |
| ! | AGCAGAAACTGAAGAAGCGT+AGG | + | chr5_4:68343029-68343048 | None:intergenic | 45.0% |
| GTTCCCTTGCTTACTGAAGA+TGG | + | chr5_4:68343086-68343105 | None:intergenic | 45.0% | |
| CACAATTCCCCCTGATGAAA+AGG | - | chr5_4:68343360-68343379 | Msa0866580:intron | 45.0% | |
| ! | GTTGTGACCTTTTCATCAGG+GGG | + | chr5_4:68343370-68343389 | None:intergenic | 45.0% |
| ATTGAAGGGAAGAGAATGCG+AGG | - | chr5_4:68343500-68343519 | Msa0866580:CDS | 45.0% | |
| ACCCATCTATATACTTCGCC+CGG | - | chr5_4:68343725-68343744 | Msa0866580:CDS | 45.0% | |
| ACCGGGCGAAGTATATAGAT+GGG | + | chr5_4:68343729-68343748 | None:intergenic | 45.0% | |
| TACCGGGCGAAGTATATAGA+TGG | + | chr5_4:68343730-68343749 | None:intergenic | 45.0% | |
| CAGATGGGATTCCAATTTGC+AGG | - | chr5_4:68344364-68344383 | Msa0866580:intron | 45.0% | |
| ! | TGGGCTTTTCTACCCAGAAA+TGG | - | chr5_4:68344443-68344462 | Msa0866580:intron | 45.0% |
| ! | GGGCTTTTCTACCCAGAAAT+GGG | - | chr5_4:68344444-68344463 | Msa0866580:intron | 45.0% |
| ! | TCATGCAACTCGACCTTTTG+TGG | - | chr5_4:68344662-68344681 | Msa0866580:intron | 45.0% |
| TTTCCTGCTATGCAGCATGT+TGG | - | chr5_4:68344883-68344902 | Msa0866580:intron | 45.0% | |
| ! | TGCTGACATGCGGAAAGTAT+TGG | - | chr5_4:68345167-68345186 | Msa0866580:intron | 45.0% |
| !!! | GTTGCACAGGAGAGTGTTTT+TGG | - | chr5_4:68345218-68345237 | Msa0866580:intron | 45.0% |
| ! | CCATAAGCGCCTGATTTTCA+GGG | + | chr5_4:68345254-68345273 | None:intergenic | 45.0% |
| ! | ACCATAAGCGCCTGATTTTC+AGG | + | chr5_4:68345255-68345274 | None:intergenic | 45.0% |
| !! | TTAACGAAAGCACTCGTCGA+AGG | + | chr5_4:68345498-68345517 | None:intergenic | 45.0% |
| CCCCCTGTTTGTTTAGATTG+TGG | - | chr5_4:68345561-68345580 | Msa0866580:intron | 45.0% | |
| TTGTGGTAGCTATCAGTACC+AGG | - | chr5_4:68345578-68345597 | Msa0866580:intron | 45.0% | |
| ACCCTAAGCATTTGACCACA+CGG | + | chr5_4:68345862-68345881 | None:intergenic | 45.0% | |
| GTGGGTACACAAATCGGATT+TGG | + | chr5_4:68346159-68346178 | None:intergenic | 45.0% | |
| TGTACCCACATTTCACTGGT+AGG | - | chr5_4:68346170-68346189 | Msa0866580:CDS | 45.0% | |
| TCACTGGTAGGAACATTCGT+TGG | - | chr5_4:68346182-68346201 | Msa0866580:CDS | 45.0% | |
| TATGAAGCAGTCATCGCTCA+TGG | + | chr5_4:68346710-68346729 | None:intergenic | 45.0% | |
| TAGAGTTATCAGCCATCACC+GGG | - | chr5_4:68347270-68347289 | Msa0866580:intron | 45.0% | |
| GATTCCACATTCAATGGTGC+TGG | - | chr5_4:68347367-68347386 | Msa0866580:CDS | 45.0% | |
| AGATGACAAGACAACTGTGC+GGG | - | chr5_4:68347489-68347508 | Msa0866580:five_prime_UTR | 45.0% | |
| TTAGTATCTGGTGCTCCGAT+TGG | + | chr5_4:68347550-68347569 | None:intergenic | 45.0% | |
| ! | AATCGGAGCACCAGATACTA+AGG | - | chr5_4:68347549-68347568 | Msa0866580:intron | 45.0% |
| GCACCAGATACTAAGGTTAG+AGG | - | chr5_4:68347556-68347575 | Msa0866580:intron | 45.0% | |
| TGATGTGGATGCCAAAGTCA+TGG | - | chr5_4:68347594-68347613 | Msa0866580:intron | 45.0% | |
| GACCCTTGGATTGTTTGACA+TGG | + | chr5_4:68347759-68347778 | None:intergenic | 45.0% | |
| !! | GTCAGTGCTGTTTGTTGATG+AGG | + | chr5_4:68347830-68347849 | None:intergenic | 45.0% |
| TTCTCTTCAAGAACAGGCCT+GGG | + | chr5_4:68347907-68347926 | None:intergenic | 45.0% | |
| ATTCTCTTCAAGAACAGGCC+TGG | + | chr5_4:68347908-68347927 | None:intergenic | 45.0% | |
| ! | GTTCTAGGTGTTGCATTGGA+TGG | - | chr5_4:68347931-68347950 | Msa0866580:intron | 45.0% |
| TGTGACAACTCAAGAGGCAA+AGG | - | chr5_4:68347993-68348012 | Msa0866580:intron | 45.0% | |
| GATCTCCAAAGGCTTCAGAT+GGG | - | chr5_4:68348043-68348062 | Msa0866580:intron | 45.0% | |
| ! | ACATTCCCATCTGAAGCCTT+TGG | + | chr5_4:68348051-68348070 | None:intergenic | 45.0% |
| ! | TATACCCCTCAGAGGTTTTG+AGG | - | chr5_4:68348234-68348253 | Msa0866580:five_prime_UTR | 45.0% |
| !! | ATAAAATTATTGAAAAATTT+GGG | + | chr5_4:68340120-68340139 | None:intergenic | 5.0% |
| !! | AATAAAATTATTGAAAAATT+TGG | + | chr5_4:68340121-68340140 | None:intergenic | 5.0% |
| !!! | TATTATTAATTTTTTTTTAG+AGG | + | chr5_4:68347018-68347037 | None:intergenic | 5.0% |
| CAGACCATGAGACAGTTGCA+GGG | + | chr5_4:68340795-68340814 | None:intergenic | 50.0% | |
| CTGCAACTGTCTCATGGTCT+GGG | - | chr5_4:68340794-68340813 | Msa0866580:CDS | 50.0% | |
| ! | CCCGGTCTTTATTGCTGTTG+AGG | + | chr5_4:68340832-68340851 | None:intergenic | 50.0% |
| ACCCTCTGCAAACCATGAAG+TGG | + | chr5_4:68340925-68340944 | None:intergenic | 50.0% | |
| GCAACCGTTTACAACAACGC+TGG | + | chr5_4:68341070-68341089 | None:intergenic | 50.0% | |
| CGTTGTTGTAAACGGTTGCC+TGG | - | chr5_4:68341071-68341090 | Msa0866580:intron | 50.0% | |
| TTTGCCACACCCATCAGCAA+AGG | - | chr5_4:68341282-68341301 | Msa0866580:intron | 50.0% | |
| TTGCCACACCCATCAGCAAA+GGG | - | chr5_4:68341283-68341302 | Msa0866580:intron | 50.0% | |
| TATTGGGTCTTGGTCCTACG+TGG | - | chr5_4:68341327-68341346 | Msa0866580:intron | 50.0% | |
| ATTGTTGGGCGTAACCACGT+AGG | + | chr5_4:68341344-68341363 | None:intergenic | 50.0% | |
| GCCCAACAATTGCGCTAAAC+AGG | - | chr5_4:68341354-68341373 | Msa0866580:intron | 50.0% | |
| TGCGCTTCCTTCTGTTAAGG+TGG | - | chr5_4:68341783-68341802 | Msa0866580:intron | 50.0% | |
| ! | GTAAAGTTGATTCCCGCCGT+TGG | - | chr5_4:68341946-68341965 | Msa0866580:intron | 50.0% |
| ACCTTCGACCACTACTGTTG+TGG | - | chr5_4:68342181-68342200 | Msa0866580:intron | 50.0% | |
| TCCACAACAGTAGTGGTCGA+AGG | + | chr5_4:68342185-68342204 | None:intergenic | 50.0% | |
| CTGGAGCCGTACTTATTTGC+AGG | - | chr5_4:68342205-68342224 | Msa0866580:intron | 50.0% | |
| TCTACCTACAGAAGCTAGCC+AGG | - | chr5_4:68342347-68342366 | Msa0866580:intron | 50.0% | |
| AGAAGCTAGCCAGGCTGTTA+AGG | - | chr5_4:68342356-68342375 | Msa0866580:intron | 50.0% | |
| GCGTGTGGAGAGAGATTAGA+AGG | + | chr5_4:68343007-68343026 | None:intergenic | 50.0% | |
| ! | AATTTTGGGCGGTGATGTGC+AGG | + | chr5_4:68343061-68343080 | None:intergenic | 50.0% |
| TCCTGCTGTGACCCATTTCT+GGG | + | chr5_4:68344458-68344477 | None:intergenic | 50.0% | |
| !! | ATCCTCAAGTTGAGCAGCAG+AGG | - | chr5_4:68345196-68345215 | Msa0866580:intron | 50.0% |
| AACCTCTGCTGCTCAACTTG+AGG | + | chr5_4:68345201-68345220 | None:intergenic | 50.0% | |
| CCCTGAAAATCAGGCGCTTA+TGG | - | chr5_4:68345251-68345270 | Msa0866580:intron | 50.0% | |
| !! | TCAACGAAAGCACTCGTCGA+AGG | + | chr5_4:68345638-68345657 | None:intergenic | 50.0% |
| ACGAAAGGGATCCCACCATT+TGG | + | chr5_4:68345781-68345800 | None:intergenic | 50.0% | |
| CAATGTAACCTCAGGTCAGC+CGG | + | chr5_4:68345833-68345852 | None:intergenic | 50.0% | |
| TGCCGTGTGGTCAAATGCTT+AGG | - | chr5_4:68345857-68345876 | Msa0866580:intron | 50.0% | |
| GCCGTGTGGTCAAATGCTTA+GGG | - | chr5_4:68345858-68345877 | Msa0866580:intron | 50.0% | |
| CTCCTGCAAAGCTCTTGATC+AGG | - | chr5_4:68346518-68346537 | Msa0866580:intron | 50.0% | |
| AGCCTGATCAAGAGCTTTGC+AGG | + | chr5_4:68346523-68346542 | None:intergenic | 50.0% | |
| TCAATGAGTGGCACGTGGAA+GGG | + | chr5_4:68346609-68346628 | None:intergenic | 50.0% | |
| TTCAATGAGTGGCACGTGGA+AGG | + | chr5_4:68346610-68346629 | None:intergenic | 50.0% | |
| AAGGTTCAATGAGTGGCACG+TGG | + | chr5_4:68346614-68346633 | None:intergenic | 50.0% | |
| ! | ATTTTCTGCAGGGTACGGAC+TGG | + | chr5_4:68347310-68347329 | None:intergenic | 50.0% |
| TGGTCCAGCACCATTGAATG+TGG | + | chr5_4:68347374-68347393 | None:intergenic | 50.0% | |
| TTCTGAGTCGACGTTTGGCT+TGG | + | chr5_4:68347797-68347816 | None:intergenic | 50.0% | |
| CGACACTGTGACAACTCAAG+AGG | - | chr5_4:68347987-68348006 | Msa0866580:intron | 50.0% | |
| AAAGGAAATGGCTGCATCCC+AGG | - | chr5_4:68348011-68348030 | Msa0866580:intron | 50.0% | |
| AAGGAAATGGCTGCATCCCA+GGG | - | chr5_4:68348012-68348031 | Msa0866580:intron | 50.0% | |
| TGGAGATCCATTTCCACCCT+GGG | + | chr5_4:68348031-68348050 | None:intergenic | 50.0% | |
| TTGGAGATCCATTTCCACCC+TGG | + | chr5_4:68348032-68348051 | None:intergenic | 50.0% | |
| GGGTGGAAATGGATCTCCAA+AGG | - | chr5_4:68348032-68348051 | Msa0866580:intron | 50.0% | |
| GGATCTCCAAAGGCTTCAGA+TGG | - | chr5_4:68348042-68348061 | Msa0866580:intron | 50.0% | |
| CAATCTTGCCGTGTCAGCCA+TGG | + | chr5_4:68339859-68339878 | None:intergenic | 55.0% | |
| TGAGACAGTTGCAGGGAACC+AGG | + | chr5_4:68340788-68340807 | None:intergenic | 55.0% | |
| GGTTCCCTGCAACTGTCTCA+TGG | - | chr5_4:68340788-68340807 | Msa0866580:CDS | 55.0% | |
| CCAGACCATGAGACAGTTGC+AGG | + | chr5_4:68340796-68340815 | None:intergenic | 55.0% | |
| CCTGCAACTGTCTCATGGTC+TGG | - | chr5_4:68340793-68340812 | Msa0866580:CDS | 55.0% | |
| ! | CTCATGGTCTGGGACTTTGC+AGG | - | chr5_4:68340804-68340823 | Msa0866580:CDS | 55.0% |
| AATGGGCACAGTTGCATGCC+AGG | + | chr5_4:68341092-68341111 | None:intergenic | 55.0% | |
| ! | CTACCCTTTGCTGATGGGTG+TGG | + | chr5_4:68341289-68341308 | None:intergenic | 55.0% |
| CGACCACTACTGTTGTGGAC+TGG | - | chr5_4:68342186-68342205 | Msa0866580:intron | 55.0% | |
| GCTCCAGTCCACAACAGTAG+TGG | + | chr5_4:68342192-68342211 | None:intergenic | 55.0% | |
| !! | ACAGCCTGGCTAGCTTCTGT+AGG | + | chr5_4:68342354-68342373 | None:intergenic | 55.0% |
| ! | ACTGAAGAAGCGTAGGCGTG+TGG | + | chr5_4:68343022-68343041 | None:intergenic | 55.0% |
| AATCCGATCCTACCCCACTG+TGG | - | chr5_4:68343278-68343297 | Msa0866580:intron | 55.0% | |
| CGGCGAGAGAGAGATCAGAA+GGG | - | chr5_4:68343537-68343556 | Msa0866580:intron | 55.0% | |
| GGCGAGAGAGAGATCAGAAG+GGG | - | chr5_4:68343538-68343557 | Msa0866580:intron | 55.0% | |
| GCGAGAGAGAGATCAGAAGG+GGG | - | chr5_4:68343539-68343558 | Msa0866580:intron | 55.0% | |
| ACCCAGAAATGGGTCACAGC+AGG | - | chr5_4:68344454-68344473 | Msa0866580:intron | 55.0% | |
| CTCCTGCTGTGACCCATTTC+TGG | + | chr5_4:68344459-68344478 | None:intergenic | 55.0% | |
| CAGAAATGGGTCACAGCAGG+AGG | - | chr5_4:68344457-68344476 | Msa0866580:intron | 55.0% | |
| ! | TGGGTCACAGCAGGAGGTTT+TGG | - | chr5_4:68344463-68344482 | Msa0866580:intron | 55.0% |
| ! | GGGTCACAGCAGGAGGTTTT+GGG | - | chr5_4:68344464-68344483 | Msa0866580:intron | 55.0% |
| ! | GTTGACTCTTGCTGGTCGTG+AGG | - | chr5_4:68344495-68344514 | Msa0866580:intron | 55.0% |
| ! | TGAGGTGTCTGGCACTGTTG+AGG | - | chr5_4:68344719-68344738 | Msa0866580:intron | 55.0% |
| CAGCCAACATGCTGCATAGC+AGG | + | chr5_4:68344889-68344908 | None:intergenic | 55.0% | |
| CTGCTATGCAGCATGTTGGC+TGG | - | chr5_4:68344887-68344906 | Msa0866580:intron | 55.0% | |
| ! | CTATGCAGCATGTTGGCTGG+TGG | - | chr5_4:68344890-68344909 | Msa0866580:intron | 55.0% |
| TTGAGCAGCAGAGGTTGCAC+AGG | - | chr5_4:68345205-68345224 | Msa0866580:intron | 55.0% | |
| !! | CGAAAGCACTCGTCGAAGGT+CGG | + | chr5_4:68345494-68345513 | None:intergenic | 55.0% |
| !! | CGAAAGCACTCGTCGAAGGT+CGG | + | chr5_4:68345494-68345513 | None:intergenic | 55.0% |
| ACGTACGCAGGGTCACGAAA+GGG | + | chr5_4:68345795-68345814 | None:intergenic | 55.0% | |
| TTTCGTGACCCTGCGTACGT+GGG | - | chr5_4:68345795-68345814 | Msa0866580:CDS | 55.0% | |
| CTTAAGCTCCCACGTACGCA+GGG | + | chr5_4:68345806-68345825 | None:intergenic | 55.0% | |
| ACTTAAGCTCCCACGTACGC+AGG | + | chr5_4:68345807-68345826 | None:intergenic | 55.0% | |
| ACGTGGGAGCTTAAGTGCAC+CGG | - | chr5_4:68345811-68345830 | Msa0866580:CDS | 55.0% | |
| !! | TACGGACTGGTGTTGCAAGC+CGG | + | chr5_4:68347297-68347316 | None:intergenic | 55.0% |
| AAAGGAAACCTGCTGCACCC+AGG | - | chr5_4:68347887-68347906 | Msa0866580:intron | 55.0% | |
| ! | GGAAGCGCAATTCGTTCGCC+TGG | + | chr5_4:68341772-68341791 | None:intergenic | 60.0% |
| CCACCACAGTGGGGTAGGAT+CGG | + | chr5_4:68343284-68343303 | None:intergenic | 60.0% | |
| ACGACCAAGCCACCACAGTG+GGG | + | chr5_4:68343293-68343312 | None:intergenic | 60.0% | |
| CACGACCAAGCCACCACAGT+GGG | + | chr5_4:68343294-68343313 | None:intergenic | 60.0% | |
| ACACGACCAAGCCACCACAG+TGG | + | chr5_4:68343295-68343314 | None:intergenic | 60.0% | |
| GCGGCGAGAGAGAGATCAGA+AGG | - | chr5_4:68343536-68343555 | Msa0866580:intron | 60.0% | |
| CACGTACGCAGGGTCACGAA+AGG | + | chr5_4:68345796-68345815 | None:intergenic | 60.0% | |
| CTTTCGTGACCCTGCGTACG+TGG | - | chr5_4:68345794-68345813 | Msa0866580:CDS | 60.0% | |
| !! | TAAGTGCACCGGCTGACCTG+AGG | - | chr5_4:68345822-68345841 | Msa0866580:CDS | 60.0% |
| TTATCAGCCATCACCGGGCC+CGG | - | chr5_4:68347275-68347294 | Msa0866580:intron | 60.0% | |
| !! | ACGGACTGGTGTTGCAAGCC+GGG | + | chr5_4:68347296-68347315 | None:intergenic | 60.0% |
| ! | CAAGGCAAACGTGGAGGTGC+CGG | - | chr5_4:68347666-68347685 | Msa0866580:intron | 60.0% |
| GAAATGGCTGCATCCCAGGG+TGG | - | chr5_4:68348015-68348034 | Msa0866580:intron | 60.0% | |
| GCTGCATCCCAGGGTGGAAA+TGG | - | chr5_4:68348021-68348040 | Msa0866580:intron | 60.0% | |
| CCGATCCTACCCCACTGTGG+TGG | - | chr5_4:68343281-68343300 | Msa0866580:intron | 65.0% | |
| CCAAGCCACCACAGTGGGGT+AGG | + | chr5_4:68343289-68343308 | None:intergenic | 65.0% | |
| CCTACCCCACTGTGGTGGCT+TGG | - | chr5_4:68343286-68343305 | Msa0866580:intron | 65.0% | |
| AGAACAGGCCTGGGTGCAGC+AGG | + | chr5_4:68347898-68347917 | None:intergenic | 65.0% | |
| TTGCAAGCCGGGCCCGGTGA+TGG | + | chr5_4:68347285-68347304 | None:intergenic | 70.0% | |
| !! | CTGGTGTTGCAAGCCGGGCC+CGG | + | chr5_4:68347291-68347310 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_4 | gene | 68339830 | 68348351 | 68339830 | ID=Msa0866580;Name=Msa0866580 |
| chr5_4 | mRNA | 68339830 | 68348351 | 68339830 | ID=Msa0866580-mRNA-1;Parent=Msa0866580;Name=Msa0866580-mRNA-1;_AED=0.11;_eAED=0.11;_QI=387|0.92|0.93|1|0.85|0.73|15|254|700 |
| chr5_4 | exon | 68339830 | 68339914 | 68339830 | ID=Msa0866580-mRNA-1:exon:21646;Parent=Msa0866580-mRNA-1 |
| chr5_4 | exon | 68339935 | 68340934 | 68339935 | ID=Msa0866580-mRNA-1:exon:21645;Parent=Msa0866580-mRNA-1 |
| chr5_4 | exon | 68341815 | 68341871 | 68341815 | ID=Msa0866580-mRNA-1:exon:21644;Parent=Msa0866580-mRNA-1 |
| chr5_4 | exon | 68342909 | 68343022 | 68342909 | ID=Msa0866580-mRNA-1:exon:21643;Parent=Msa0866580-mRNA-1 |
| chr5_4 | exon | 68343116 | 68343283 | 68343116 | ID=Msa0866580-mRNA-1:exon:21642;Parent=Msa0866580-mRNA-1 |
| chr5_4 | exon | 68343441 | 68343551 | 68343441 | ID=Msa0866580-mRNA-1:exon:21641;Parent=Msa0866580-mRNA-1 |
| chr5_4 | exon | 68343665 | 68343814 | 68343665 | ID=Msa0866580-mRNA-1:exon:21640;Parent=Msa0866580-mRNA-1 |
| chr5_4 | exon | 68345362 | 68345398 | 68345362 | ID=Msa0866580-mRNA-1:exon:21639;Parent=Msa0866580-mRNA-1 |
| chr5_4 | exon | 68345739 | 68345852 | 68345739 | ID=Msa0866580-mRNA-1:exon:21638;Parent=Msa0866580-mRNA-1 |
| chr5_4 | exon | 68345955 | 68346052 | 68345955 | ID=Msa0866580-mRNA-1:exon:21637;Parent=Msa0866580-mRNA-1 |
| chr5_4 | exon | 68346146 | 68346269 | 68346146 | ID=Msa0866580-mRNA-1:exon:21636;Parent=Msa0866580-mRNA-1 |
| chr5_4 | exon | 68346357 | 68346520 | 68346357 | ID=Msa0866580-mRNA-1:exon:21635;Parent=Msa0866580-mRNA-1 |
| chr5_4 | exon | 68347182 | 68347241 | 68347182 | ID=Msa0866580-mRNA-1:exon:21634;Parent=Msa0866580-mRNA-1 |
| chr5_4 | exon | 68347331 | 68347531 | 68347331 | ID=Msa0866580-mRNA-1:exon:21633;Parent=Msa0866580-mRNA-1 |
| chr5_4 | exon | 68348091 | 68348351 | 68348091 | ID=Msa0866580-mRNA-1:exon:21632;Parent=Msa0866580-mRNA-1 |
| chr5_4 | five_prime_UTR | 68348091 | 68348351 | 68348091 | ID=Msa0866580-mRNA-1:five_prime_utr;Parent=Msa0866580-mRNA-1 |
| chr5_4 | five_prime_UTR | 68347406 | 68347531 | 68347406 | ID=Msa0866580-mRNA-1:five_prime_utr;Parent=Msa0866580-mRNA-1 |
| chr5_4 | CDS | 68347331 | 68347405 | 68347331 | ID=Msa0866580-mRNA-1:cds;Parent=Msa0866580-mRNA-1 |
| chr5_4 | CDS | 68347182 | 68347241 | 68347182 | ID=Msa0866580-mRNA-1:cds;Parent=Msa0866580-mRNA-1 |
| chr5_4 | CDS | 68346357 | 68346520 | 68346357 | ID=Msa0866580-mRNA-1:cds;Parent=Msa0866580-mRNA-1 |
| chr5_4 | CDS | 68346146 | 68346269 | 68346146 | ID=Msa0866580-mRNA-1:cds;Parent=Msa0866580-mRNA-1 |
| chr5_4 | CDS | 68345955 | 68346052 | 68345955 | ID=Msa0866580-mRNA-1:cds;Parent=Msa0866580-mRNA-1 |
| chr5_4 | CDS | 68345739 | 68345852 | 68345739 | ID=Msa0866580-mRNA-1:cds;Parent=Msa0866580-mRNA-1 |
| chr5_4 | CDS | 68345362 | 68345398 | 68345362 | ID=Msa0866580-mRNA-1:cds;Parent=Msa0866580-mRNA-1 |
| chr5_4 | CDS | 68343665 | 68343814 | 68343665 | ID=Msa0866580-mRNA-1:cds;Parent=Msa0866580-mRNA-1 |
| chr5_4 | CDS | 68343441 | 68343551 | 68343441 | ID=Msa0866580-mRNA-1:cds;Parent=Msa0866580-mRNA-1 |
| chr5_4 | CDS | 68343116 | 68343283 | 68343116 | ID=Msa0866580-mRNA-1:cds;Parent=Msa0866580-mRNA-1 |
| chr5_4 | CDS | 68342909 | 68343022 | 68342909 | ID=Msa0866580-mRNA-1:cds;Parent=Msa0866580-mRNA-1 |
| chr5_4 | CDS | 68341815 | 68341871 | 68341815 | ID=Msa0866580-mRNA-1:cds;Parent=Msa0866580-mRNA-1 |
| chr5_4 | CDS | 68340104 | 68340934 | 68340104 | ID=Msa0866580-mRNA-1:cds;Parent=Msa0866580-mRNA-1 |
| chr5_4 | three_prime_UTR | 68339935 | 68340103 | 68339935 | ID=Msa0866580-mRNA-1:three_prime_utr;Parent=Msa0866580-mRNA-1 |
| chr5_4 | three_prime_UTR | 68339830 | 68339914 | 68339830 | ID=Msa0866580-mRNA-1:three_prime_utr;Parent=Msa0866580-mRNA-1 |
| Gene Sequence |
| Protein sequence |
