AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0424570


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0424570 MtrunA17_Chr3g0126401 98.249 514 9 0 1 514 1 514 0.0 1030
Msa0424570 MtrunA17_Chr3g0145921 28.819 288 200 3 229 514 287 571 2.75e-33 133
Msa0424570 MtrunA17_Chr7g0264491 31.000 300 202 4 216 513 257 553 3.38e-32 130
Msa0424570 MtrunA17_Chr1g0180881 28.819 288 200 3 216 501 261 545 1.18e-29 122
Msa0424570 MtrunA17_Chr4g0021031 30.565 301 181 10 222 505 204 493 1.46e-23 103
Msa0424570 MtrunA17_Chr3g0090001 32.394 213 140 3 305 514 192 403 3.90e-19 89.7
Msa0424570 MtrunA17_Chr1g0146481 25.954 262 180 6 256 513 296 547 6.00e-17 84.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0424570 AT5G24120.1 61.877 522 186 5 1 514 1 517 0.0 625
Msa0424570 AT5G24120.3 61.877 522 186 5 1 514 1 517 0.0 625
Msa0424570 AT5G24120.2 61.877 522 186 5 1 514 1 517 0.0 625
Msa0424570 AT2G36990.1 31.333 300 201 3 216 513 247 543 1.59e-35 139
Msa0424570 AT1G08540.1 30.903 288 194 3 229 514 285 569 3.78e-34 136
Msa0424570 AT5G13730.1 27.532 316 197 9 215 512 113 414 4.30e-21 95.9
Msa0424570 AT1G64860.1 28.094 299 191 8 222 505 202 491 1.15e-20 95.5
Msa0424570 AT1G64860.2 28.497 193 130 4 222 410 202 390 6.73e-16 80.9
Msa0424570 AT3G53920.1 25.614 285 196 7 237 513 293 569 3.17e-14 75.9

Find 137 sgRNAs with CRISPR-Local

Find 277 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TATGATCGTGAGTATTTAAA+TGG 0.229731 3_2:-74796533 None:intergenic
ATTACATCACGGTATCTTTC+AGG 0.229998 3_2:-74795425 None:intergenic
TTGTTAATCTCTTCTATATA+TGG 0.255988 3_2:+74796685 Msa0424570:three_prime_UTR
AGAAGATTGACGAACTTCTA+AGG 0.267064 3_2:+74793393 Msa0424570:CDS
CCGTTAACGGTAGCATTTAA+AGG 0.276378 3_2:+74792921 Msa0424570:CDS
AAGAGGATTTAAACAGTGAT+AGG 0.297201 3_2:+74793243 Msa0424570:CDS
CCTTTAAATGCTACCGTTAA+CGG 0.304115 3_2:-74792921 None:intergenic
GAGACAGCTCTTGGTTTCTT+AGG 0.309175 3_2:-74793050 None:intergenic
TTGAGCCAAACCGGAGATTT+CGG 0.320769 3_2:+74794710 Msa0424570:CDS
AATGAGCTTCTCACCTTCAT+TGG 0.323733 3_2:-74793521 None:intergenic
ATACTCAGTACCGGCTGATT+TGG 0.341811 3_2:+74793418 Msa0424570:CDS
CTCATCAAGATTCATCCGTT+TGG 0.343384 3_2:-74793291 None:intergenic
GTAAATCATCTTTCACTTGA+AGG 0.343761 3_2:-74793984 None:intergenic
AGCTTCTCACGTGTTCCCTT+TGG 0.354929 3_2:+74794793 Msa0424570:CDS
GTCTTGAATGCAGTGATAGA+AGG 0.357509 3_2:-74795463 None:intergenic
GTTGATGATGGTGGTGTTGA+TGG 0.360239 3_2:+74795521 Msa0424570:CDS
CCTAGAGATGTTCAAGTTTG+AGG 0.363298 3_2:-74796326 None:intergenic
CTTTGTCAGGCTGGAGTTAA+GGG 0.363815 3_2:+74794664 Msa0424570:CDS
TTTCAACCTACAGTCTGTTT+TGG 0.364864 3_2:+74794734 Msa0424570:CDS
TCTTTGTCAGGCTGGAGTTA+AGG 0.368656 3_2:+74794663 Msa0424570:CDS
GAGAATGAAAGAGAAATTAT+AGG 0.379992 3_2:-74792148 None:intergenic
TCCTCAGTGGAGACAGCTCT+TGG 0.384406 3_2:-74793059 None:intergenic
TGCAAGAAATAAGCTAATAA+AGG 0.388641 3_2:+74794104 Msa0424570:CDS
ATCAATGGGGTTGTTGATGA+TGG 0.389488 3_2:+74795509 Msa0424570:CDS
CGTCGCTATGTTGTATAAAT+CGG 0.401881 3_2:+74796418 Msa0424570:exon
TAACTGAAATTCGAAAATTA+CGG 0.403208 3_2:-74792106 None:intergenic
TGCTCCGAAGAAGGCAGAAC+TGG 0.403451 3_2:-74793473 None:intergenic
AATCTAGACAAAGAATCTAA+TGG 0.405112 3_2:-74792170 None:intergenic
ACCTCCAGTTCTGCCTTCTT+CGG 0.405115 3_2:+74793469 Msa0424570:CDS
AGAGAAATTATAGGTGTTTG+AGG 0.409965 3_2:-74792139 None:intergenic
ATAATCTGCATCACATATAT+CGG 0.410715 3_2:-74793162 None:intergenic
CTTGAACATCTCTAGGGAAA+TGG 0.415901 3_2:+74796333 Msa0424570:CDS
AGACAGAGGTTTGGACTTGA+TGG 0.418320 3_2:+74796274 Msa0424570:CDS
CAGCCAAGACGCACAAGAAA+AGG 0.419331 3_2:+74793006 Msa0424570:CDS
CCTCAAACTTGAACATCTCT+AGG 0.422830 3_2:+74796326 Msa0424570:CDS
ATGTACATTGTGCAATTTCA+AGG 0.427633 3_2:-74796583 None:intergenic
TTTCTTTCTAAACACTGATT+AGG 0.428773 3_2:+74792798 Msa0424570:five_prime_UTR
TCTATTATTTCTTCCTCCGT+TGG 0.435604 3_2:-74795386 None:intergenic
AATCTTCTCAATTCTACTCC+TGG 0.438326 3_2:-74793378 None:intergenic
CTGATTAGGCAAACTTGGTA+TGG 0.439102 3_2:+74792812 Msa0424570:exon
GGTAAGGGTGACAGAACTTT+GGG 0.439878 3_2:+74796295 Msa0424570:CDS
AGATTACATGTAACGTGTAT+AGG 0.456918 3_2:-74796611 None:intergenic
TTTCAAGATCTTTGTCAGGC+TGG 0.460093 3_2:+74794655 Msa0424570:CDS
CGCAAGAAGAGTTTATCAAT+GGG 0.461379 3_2:+74795495 Msa0424570:CDS
GAAAGCCGAAATCTCCGGTT+TGG 0.463173 3_2:-74794715 None:intergenic
TTGGTGATCAGACAGAGGTT+TGG 0.464083 3_2:+74796265 Msa0424570:CDS
AAACACTGATTAGGCAAACT+TGG 0.465435 3_2:+74792807 Msa0424570:five_prime_UTR
TGACAAAGATCTTGAAACCT+TGG 0.467823 3_2:-74794649 None:intergenic
CTGATCACCAAGTTCTCCTT+AGG 0.468005 3_2:-74796253 None:intergenic
GCTCAAGCATTCAGCTCGAT+TGG 0.469057 3_2:+74796387 Msa0424570:CDS
AAGGTTTCAAGATCTTTGTC+AGG 0.472724 3_2:+74794651 Msa0424570:CDS
TGGTAAGGGTGACAGAACTT+TGG 0.477364 3_2:+74796294 Msa0424570:CDS
ATCTTCTCAATTCTACTCCT+GGG 0.478589 3_2:-74793377 None:intergenic
ATAACTCAATCTTAGCTCTT+CGG 0.481173 3_2:-74795343 None:intergenic
TCAAGTAAAGAAAGCAATAG+AGG 0.482166 3_2:+74794071 Msa0424570:CDS
CATCACATATATCGGTTGTC+GGG 0.482870 3_2:-74793154 None:intergenic
TTACATCACGGTATCTTTCA+GGG 0.483805 3_2:-74795424 None:intergenic
TGTATTGAAGAGACCGTTAA+CGG 0.487228 3_2:+74792908 Msa0424570:CDS
CTGATTTGGTCAGTCTAGAC+TGG 0.488397 3_2:+74793432 Msa0424570:CDS
GCATCACATATATCGGTTGT+CGG 0.491957 3_2:-74793155 None:intergenic
TAATCCACATCCAATGAAGA+TGG 0.497477 3_2:-74793089 None:intergenic
TCTCGAAGGGGTAAGAAGAT+TGG 0.504636 3_2:+74793209 Msa0424570:CDS
GAAGGCAACCTGCTCTACTA+AGG 0.506636 3_2:+74795552 Msa0424570:CDS
TTGTACCTTTGATCTCTGAA+TGG 0.508503 3_2:-74792196 None:intergenic
AGAGCAAGCCTTAGTAGAGC+AGG 0.510037 3_2:-74795560 None:intergenic
CTCTACTATGTGACTAGGTA+AGG 0.512361 3_2:-74796491 None:intergenic
GTTAACGGTCTCTTCAATAC+AGG 0.512611 3_2:-74792906 None:intergenic
ACGCAAGAAGAGTTTATCAA+TGG 0.515058 3_2:+74795494 Msa0424570:CDS
TGAGAAGCTTGCGAGGGTCA+TGG 0.515197 3_2:-74794779 None:intergenic
AGATGATTTACAGAAGGAGC+TGG 0.516579 3_2:+74793996 Msa0424570:CDS
ATTGTGCTGTTGCAGGAACT+TGG 0.521028 3_2:+74792753 Msa0424570:intron
GATTGGTGATGTAAGTAAAG+AGG 0.522341 3_2:+74793226 Msa0424570:CDS
GAGGTTTGGACTTGATGGTA+AGG 0.523710 3_2:+74796279 Msa0424570:CDS
CTGTTTCAAGCTCAGCTGCT+CGG 0.525455 3_2:+74792844 Msa0424570:CDS
GACAAAGATCTTGAAACCTT+GGG 0.527279 3_2:-74794648 None:intergenic
ATCGTGAGTATTTAAATGGC+CGG 0.531263 3_2:-74796529 None:intergenic
GTAAAGAAAGCAATAGAGGT+TGG 0.531566 3_2:+74794075 Msa0424570:CDS
TCTGAAGCCTAAGGAGAACT+TGG 0.533811 3_2:+74796246 Msa0424570:CDS
TCTTGAATGCAGTGATAGAA+GGG 0.536462 3_2:-74795462 None:intergenic
GAAGATTGACGAACTTCTAA+GGG 0.538367 3_2:+74793394 Msa0424570:CDS
CATCACTCTACTATGTGACT+AGG 0.539134 3_2:-74796496 None:intergenic
GCTTGATTCTCTGAAGCCTA+AGG 0.542662 3_2:+74796237 Msa0424570:intron
CTCAAACTTGAACATCTCTA+GGG 0.544621 3_2:+74796327 Msa0424570:CDS
AGTTATCATTTCAGCTTCAG+AGG 0.545216 3_2:+74795360 Msa0424570:CDS
ACCAGAAAACAAAAGCCAAA+CGG 0.546934 3_2:+74793276 Msa0424570:CDS
CAAGTTGATGCAACCAATGA+AGG 0.548325 3_2:+74793508 Msa0424570:CDS
GGAGCTGGAAAGAGAGCCTA+CGG 0.552589 3_2:+74794011 Msa0424570:CDS
AAGATACCGTGATGTAATGA+AGG 0.553790 3_2:+74795430 Msa0424570:CDS
TGTTCCCTTTGGACTTGAGT+CGG 0.554834 3_2:+74794804 Msa0424570:CDS
AATGGGGTTGTTGATGATGG+TGG 0.565643 3_2:+74795512 Msa0424570:CDS
AGAGGATTTAAACAGTGATA+GGG 0.568935 3_2:+74793244 Msa0424570:CDS
AGTGAAAGATGATTTACAGA+AGG 0.573532 3_2:+74793990 Msa0424570:CDS
TCAGCTGCTCGGACTCCACT+AGG 0.575229 3_2:+74792855 Msa0424570:CDS
TACTATGTGACTAGGTAAGG+TGG 0.576171 3_2:-74796488 None:intergenic
AGAGTGATGATTTGCATCAC+CGG 0.577731 3_2:+74796510 Msa0424570:three_prime_UTR
CATACCGACTCAAGTCCAAA+GGG 0.580195 3_2:-74794808 None:intergenic
GGTGAGAAAGCACGAAGTCA+AGG 0.585592 3_2:+74796354 Msa0424570:CDS
GAACACGTGAGAAGCTTGCG+AGG 0.589931 3_2:-74794786 None:intergenic
TTCTTCCATTCAGAGATCAA+AGG 0.591840 3_2:+74792191 Msa0424570:five_prime_UTR
AGGTTGAAAGCCGAAATCTC+CGG 0.593857 3_2:-74794720 None:intergenic
GTGTTGATGGCGATAACAGA+AGG 0.598234 3_2:+74795534 Msa0424570:CDS
GATCAAAAGAGTCTCTCGAA+GGG 0.598531 3_2:+74793196 Msa0424570:CDS
AACTTTGTATTCAATCCTAG+TGG 0.599283 3_2:-74792870 None:intergenic
AGGTTTGGACTTGATGGTAA+GGG 0.603110 3_2:+74796280 Msa0424570:CDS
TGATTAGGCAAACTTGGTAT+GGG 0.604520 3_2:+74792813 Msa0424570:exon
TCAGCTATTTCATCCTCCGT+AGG 0.604604 3_2:-74794027 None:intergenic
TCTAAGGGAATACTCAGTAC+CGG 0.605704 3_2:+74793409 Msa0424570:CDS
AGCTTGCGAGGGTCATGGAA+CGG 0.606319 3_2:-74794774 None:intergenic
ACATACCGACTCAAGTCCAA+AGG 0.607252 3_2:-74794809 None:intergenic
ACTATGTGACTAGGTAAGGT+GGG 0.607499 3_2:-74796487 None:intergenic
AGGTAAGGTGGGACTACCAC+GGG 0.608326 3_2:-74796476 None:intergenic
TTGATGCCTTCATTACATCA+CGG 0.616848 3_2:-74795436 None:intergenic
TACATCACGGTATCTTTCAG+GGG 0.616885 3_2:-74795423 None:intergenic
AACGGATGAATCTTGATGAG+AGG 0.617893 3_2:+74793294 Msa0424570:CDS
ATTGATAAACTCTTCTTGCG+TGG 0.621610 3_2:-74795492 None:intergenic
AGATCAAAAGAGTCTCTCGA+AGG 0.624213 3_2:+74793195 Msa0424570:CDS
TCTTATCCAAAACAGACTGT+AGG 0.625554 3_2:-74794740 None:intergenic
AAGGCTTGCTCTTGATGATG+TGG 0.625750 3_2:+74795571 Msa0424570:CDS
GTGAAGATGTCATTCCAACT+CGG 0.626818 3_2:+74793342 Msa0424570:CDS
TAAACAGAATGACACAGCGT+TGG 0.627600 3_2:+74792947 Msa0424570:CDS
CTTGAATGCAGTGATAGAAG+GGG 0.628428 3_2:-74795461 None:intergenic
TCCGAAGAAGGCAGAACTGG+AGG 0.632944 3_2:-74793470 None:intergenic
TCAGCTTCAGAGGTCACCAA+CGG 0.634098 3_2:+74795370 Msa0424570:CDS
GGATTTAAACAGTGATAGGG+TGG 0.634412 3_2:+74793247 Msa0424570:CDS
TGATCACGAACAAGACAAGC+CGG 0.636977 3_2:-74794597 None:intergenic
TCTAGACTGACCAAATCAGC+CGG 0.641619 3_2:-74793428 None:intergenic
ATCAAAAGAGTCTCTCGAAG+GGG 0.655049 3_2:+74793197 Msa0424570:CDS
TACAGAAATACATGTGCCCG+TGG 0.657647 3_2:+74796460 Msa0424570:three_prime_UTR
AACACGTGAGAAGCTTGCGA+GGG 0.668557 3_2:-74794785 None:intergenic
ACGGTCTCTTCAATACAGGA+TGG 0.670415 3_2:-74792902 None:intergenic
TAGGTAAGGTGGGACTACCA+CGG 0.670858 3_2:-74796477 None:intergenic
TTACATGTAACGTGTATAGG+TGG 0.675107 3_2:-74796608 None:intergenic
GCTTCAGAGGTCACCAACGG+AGG 0.677471 3_2:+74795373 Msa0424570:CDS
AGAACTTGGTGATCAGACAG+AGG 0.691541 3_2:+74796260 Msa0424570:CDS
GCAAGAAGAGTTTATCAATG+GGG 0.710931 3_2:+74795496 Msa0424570:CDS
ACCAAGAGCTGTCTCCACTG+AGG 0.712371 3_2:+74793058 Msa0424570:CDS
GCTGGAAAGAGAGCCTACGG+AGG 0.718077 3_2:+74794014 Msa0424570:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATATTTGAAACTAAATTGAA+TGG + chr3_2:74792645-74792664 Msa0424570:intron 15.0%
!!! TTTGTATATATTTTCAAGTA+TGG - chr3_2:74793129-74793148 None:intergenic 15.0%
!! TTACATCAATAATTAAGAAA+TGG + chr3_2:74794545-74794564 Msa0424570:intron 15.0%
!! CAATTTATTACAATACATAT+AGG - chr3_2:74794994-74795013 None:intergenic 15.0%
!! AAAAATTGTGAAATATCATT+AGG + chr3_2:74795754-74795773 Msa0424570:intron 15.0%
!! AATAGAATGAATCAAATCAA+AGG + chr3_2:74792396-74792415 Msa0424570:intron 20.0%
!!! ATTGTTTTTCCTTTCTAATT+TGG + chr3_2:74792471-74792490 Msa0424570:intron 20.0%
!! TACCAATGATTATATGTATA+AGG + chr3_2:74792526-74792545 Msa0424570:intron 20.0%
!! TTCCTTATACATATAATCAT+TGG - chr3_2:74792531-74792550 None:intergenic 20.0%
!! TGAAATTCATGCATATAATA+TGG + chr3_2:74793757-74793776 Msa0424570:intron 20.0%
!!! AGATACATTTGTTAATTTTC+AGG + chr3_2:74793957-74793976 Msa0424570:intron 20.0%
!! GACTTTGTAATCTTTAAATT+TGG + chr3_2:74794486-74794505 Msa0424570:intron 20.0%
!! TTTATTACAATACATATAGG+TGG - chr3_2:74794991-74795010 None:intergenic 20.0%
!! CAATGAAAATATTATTGGAT+CGG - chr3_2:74795172-74795191 None:intergenic 20.0%
!! TTGTTAATCTCTTCTATATA+TGG + chr3_2:74796685-74796704 Msa0424570:three_prime_UTR 20.0%
! GAGAATGAAAGAGAAATTAT+AGG - chr3_2:74792151-74792170 None:intergenic 25.0%
! AATCTAGACAAAGAATCTAA+TGG - chr3_2:74792173-74792192 None:intergenic 25.0%
! TTATATGTATAAGGAATCAC+TGG + chr3_2:74792535-74792554 Msa0424570:intron 25.0%
!! TTTCTTTCTAAACACTGATT+AGG + chr3_2:74792798-74792817 Msa0424570:five_prime_UTR 25.0%
! ATAATCTGCATCACATATAT+CGG - chr3_2:74793165-74793184 None:intergenic 25.0%
! TATTGGAAATATTGTTGACA+TGG - chr3_2:74793882-74793901 None:intergenic 25.0%
! CAACAATATTTCCAATATAG+TGG + chr3_2:74793885-74793904 Msa0424570:intron 25.0%
! TGCAAGAAATAAGCTAATAA+AGG + chr3_2:74794104-74794123 Msa0424570:CDS 25.0%
! AAAGTCATCAGAAATTTCAA+TGG - chr3_2:74794472-74794491 None:intergenic 25.0%
! AACAATATCACTAAAAAGAG+AGG - chr3_2:74794512-74794531 None:intergenic 25.0%
!!! CTCTTTTTAGTGATATTGTT+TGG + chr3_2:74794512-74794531 Msa0424570:intron 25.0%
! CATCAATAATTAAGAAATGG+TGG + chr3_2:74794548-74794567 Msa0424570:intron 25.0%
!! AAATTCGATTTGTGATACTT+CGG + chr3_2:74795028-74795047 Msa0424570:intron 25.0%
!! CGATCCAATAATATTTTCAT+TGG + chr3_2:74795170-74795189 Msa0424570:intron 25.0%
! TTGGCCAATGAAAATATTAT+TGG - chr3_2:74795177-74795196 None:intergenic 25.0%
!! TATTTTCATTGGCCAATAAT+TGG + chr3_2:74795181-74795200 Msa0424570:intron 25.0%
!! ATATTTTCTTTGAATATCCC+AGG - chr3_2:74795228-74795247 None:intergenic 25.0%
! TGGGATATTCAAAGAAAATA+TGG + chr3_2:74795227-74795246 Msa0424570:intron 25.0%
! ATGAACTTGATTGATTGATT+TGG + chr3_2:74795276-74795295 Msa0424570:intron 25.0%
!! TGAACTTGATTGATTGATTT+GGG + chr3_2:74795277-74795296 Msa0424570:intron 25.0%
! TATTGTAAACAGTGTACATT+AGG + chr3_2:74795668-74795687 Msa0424570:intron 25.0%
!! ACTAAACATTGTTTCTCTTA+AGG + chr3_2:74795864-74795883 Msa0424570:intron 25.0%
! ATATGGTTTAATGAAACTGT+TGG - chr3_2:74796024-74796043 None:intergenic 25.0%
! CAGTTTCATTAAACCATATT+TGG + chr3_2:74796025-74796044 Msa0424570:intron 25.0%
! TAGTTCACATCTAATGATTT+GGG - chr3_2:74796091-74796110 None:intergenic 25.0%
!! GTTTTTAAATTGTGCGATTA+AGG + chr3_2:74796111-74796130 Msa0424570:intron 25.0%
! TATGATCGTGAGTATTTAAA+TGG - chr3_2:74796536-74796555 None:intergenic 25.0%
AGAGAAATTATAGGTGTTTG+AGG - chr3_2:74792142-74792161 None:intergenic 30.0%
TTTCCTTTCTAATTTGGTCT+AGG + chr3_2:74792477-74792496 Msa0424570:intron 30.0%
TGTTTGCATGTGCATTATTT+AGG + chr3_2:74792500-74792519 Msa0424570:intron 30.0%
!! ATGCTTAGAGTATGTTTTGA+TGG + chr3_2:74792580-74792599 Msa0424570:intron 30.0%
!!! TTAGAGTATGTTTTGATGGA+GGG + chr3_2:74792584-74792603 Msa0424570:intron 30.0%
! CAATTGATTCTTTGTGCTTA+CGG + chr3_2:74792673-74792692 Msa0424570:intron 30.0%
AACTTTGTATTCAATCCTAG+TGG - chr3_2:74792873-74792892 None:intergenic 30.0%
! GGAAAATTTTCCATCTTCAT+TGG + chr3_2:74793079-74793098 Msa0424570:CDS 30.0%
AAGAGGATTTAAACAGTGAT+AGG + chr3_2:74793243-74793262 Msa0424570:CDS 30.0%
AGAGGATTTAAACAGTGATA+GGG + chr3_2:74793244-74793263 Msa0424570:CDS 30.0%
GAGTAAATTGAAAGAAAGTG+TGG - chr3_2:74793567-74793586 None:intergenic 30.0%
TATATGCATGAATTTCAGCA+TGG - chr3_2:74793754-74793773 None:intergenic 30.0%
AACATCATTGACCACTATAT+TGG - chr3_2:74793899-74793918 None:intergenic 30.0%
ATATAGTGGTCAATGATGTT+AGG + chr3_2:74793899-74793918 Msa0424570:intron 30.0%
GTAAATCATCTTTCACTTGA+AGG - chr3_2:74793987-74794006 None:intergenic 30.0%
AGTGAAAGATGATTTACAGA+AGG + chr3_2:74793990-74794009 Msa0424570:CDS 30.0%
TCAAGTAAAGAAAGCAATAG+AGG + chr3_2:74794071-74794090 Msa0424570:CDS 30.0%
! TGTTCAATTCTTTTACAGCT+TGG + chr3_2:74794137-74794156 Msa0424570:intron 30.0%
ATCTAACTAATGAGTTCTTC+TGG + chr3_2:74794196-74794215 Msa0424570:intron 30.0%
TAGTCAACTCAACTTATGAT+AGG + chr3_2:74794222-74794241 Msa0424570:intron 30.0%
AGTCAACTCAACTTATGATA+GGG + chr3_2:74794223-74794242 Msa0424570:intron 30.0%
TCAACTTATGATAGGGATTT+AGG + chr3_2:74794230-74794249 Msa0424570:intron 30.0%
! AGAGTATCTACAGTCATATT+TGG + chr3_2:74794307-74794326 Msa0424570:intron 30.0%
CTATATCCTTCTAACTTTGA+TGG + chr3_2:74794346-74794365 Msa0424570:intron 30.0%
ACTACTATTGCTGTGAATAT+TGG - chr3_2:74794386-74794405 None:intergenic 30.0%
AGTTGAGTTTACATGGTTAT+AGG + chr3_2:74794433-74794452 Msa0424570:intron 30.0%
ATCAGAAATTTCAATGGAAG+AGG - chr3_2:74794466-74794485 None:intergenic 30.0%
AAAACAATAATCAGCATGTG+TGG - chr3_2:74794848-74794867 None:intergenic 30.0%
GATGTAAAAATAACTGCTGT+AGG + chr3_2:74794948-74794967 Msa0424570:intron 30.0%
! AATTCGATTTGTGATACTTC+GGG + chr3_2:74795029-74795048 Msa0424570:intron 30.0%
TGTATAGTCCTACCAATTAT+TGG - chr3_2:74795196-74795215 None:intergenic 30.0%
ACTATACAAGATTTAAGCCT+GGG + chr3_2:74795208-74795227 Msa0424570:intron 30.0%
!!! GGTATCTTTTAATTTTGTGC+AGG + chr3_2:74795307-74795326 Msa0424570:intron 30.0%
! ATAACTCAATCTTAGCTCTT+CGG - chr3_2:74795346-74795365 None:intergenic 30.0%
AGTGTACATTAGGTATTTGT+TGG + chr3_2:74795678-74795697 Msa0424570:intron 30.0%
GGACTGCTATTAAGAATTTA+AGG + chr3_2:74795990-74796009 Msa0424570:intron 30.0%
CTGCTATTAAGAATTTAAGG+CGG + chr3_2:74795993-74796012 Msa0424570:intron 30.0%
CTATAAATCATGTCTCATCA+AGG - chr3_2:74796058-74796077 None:intergenic 30.0%
CTAGTTCACATCTAATGATT+TGG - chr3_2:74796092-74796111 None:intergenic 30.0%
TCAAACATTAGTTGCTAAGA+GGG - chr3_2:74796198-74796217 None:intergenic 30.0%
ATCAAACATTAGTTGCTAAG+AGG - chr3_2:74796199-74796218 None:intergenic 30.0%
ATGTACATTGTGCAATTTCA+AGG - chr3_2:74796586-74796605 None:intergenic 30.0%
AGATTACATGTAACGTGTAT+AGG - chr3_2:74796614-74796633 None:intergenic 30.0%
TTCTTCCATTCAGAGATCAA+AGG + chr3_2:74792191-74792210 Msa0424570:five_prime_UTR 35.0%
TTGTACCTTTGATCTCTGAA+TGG - chr3_2:74792199-74792218 None:intergenic 35.0%
ACACCTAGACCAAATTAGAA+AGG - chr3_2:74792483-74792502 None:intergenic 35.0%
! GAATCACTGGTTAATCAATG+TGG + chr3_2:74792548-74792567 Msa0424570:intron 35.0%
!!! CTTAGAGTATGTTTTGATGG+AGG + chr3_2:74792583-74792602 Msa0424570:intron 35.0%
GAAACGAAGCTCAATTGAAT+TGG + chr3_2:74792617-74792636 Msa0424570:intron 35.0%
! AAACACTGATTAGGCAAACT+TGG + chr3_2:74792807-74792826 Msa0424570:five_prime_UTR 35.0%
TGATTAGGCAAACTTGGTAT+GGG + chr3_2:74792813-74792832 Msa0424570:exon 35.0%
TGTATTGAAGAGACCGTTAA+CGG + chr3_2:74792908-74792927 Msa0424570:CDS 35.0%
CCTTTAAATGCTACCGTTAA+CGG - chr3_2:74792924-74792943 None:intergenic 35.0%
! AGATGGAAAATTTTCCTCAG+TGG - chr3_2:74793075-74793094 None:intergenic 35.0%
! TTTTCCATCTTCATTGGATG+TGG + chr3_2:74793085-74793104 Msa0424570:CDS 35.0%
TAATCCACATCCAATGAAGA+TGG - chr3_2:74793092-74793111 None:intergenic 35.0%
!! GATTGGTGATGTAAGTAAAG+AGG + chr3_2:74793226-74793245 Msa0424570:CDS 35.0%
!!! TGGCTTTTGTTTTCTGGTTT+CGG - chr3_2:74793274-74793293 None:intergenic 35.0%
ACCAGAAAACAAAAGCCAAA+CGG + chr3_2:74793276-74793295 Msa0424570:CDS 35.0%
!!! GGATTTCTTTTTTTCCGAGT+TGG - chr3_2:74793359-74793378 None:intergenic 35.0%
ATCTTCTCAATTCTACTCCT+GGG - chr3_2:74793380-74793399 None:intergenic 35.0%
AATCTTCTCAATTCTACTCC+TGG - chr3_2:74793381-74793400 None:intergenic 35.0%
AGAAGATTGACGAACTTCTA+AGG + chr3_2:74793393-74793412 Msa0424570:CDS 35.0%
GAAGATTGACGAACTTCTAA+GGG + chr3_2:74793394-74793413 Msa0424570:CDS 35.0%
TTGAAGGACGAATAAAGCAA+AGG + chr3_2:74793719-74793738 Msa0424570:intron 35.0%
CTTGATAAGCAAGGAATTCA+AGG + chr3_2:74793847-74793866 Msa0424570:intron 35.0%
GTAAAGAAAGCAATAGAGGT+TGG + chr3_2:74794075-74794094 Msa0424570:CDS 35.0%
TGACTGTAGATACTCTATTG+AGG - chr3_2:74794303-74794322 None:intergenic 35.0%
AGTCATATTTGGCGAATTCA+TGG + chr3_2:74794318-74794337 Msa0424570:intron 35.0%
GTCATATTTGGCGAATTCAT+GGG + chr3_2:74794319-74794338 Msa0424570:intron 35.0%
TCATATTTGGCGAATTCATG+GGG + chr3_2:74794320-74794339 Msa0424570:intron 35.0%
GTTTCTCCATCAAAGTTAGA+AGG - chr3_2:74794355-74794374 None:intergenic 35.0%
ACCATGAAGTTGAGTTTACA+TGG + chr3_2:74794426-74794445 Msa0424570:intron 35.0%
ACCATGTAAACTCAACTTCA+TGG - chr3_2:74794430-74794449 None:intergenic 35.0%
GACAAAGATCTTGAAACCTT+GGG - chr3_2:74794651-74794670 None:intergenic 35.0%
TGACAAAGATCTTGAAACCT+TGG - chr3_2:74794652-74794671 None:intergenic 35.0%
AAGGTTTCAAGATCTTTGTC+AGG + chr3_2:74794651-74794670 Msa0424570:CDS 35.0%
! TTTCAACCTACAGTCTGTTT+TGG + chr3_2:74794734-74794753 Msa0424570:CDS 35.0%
TCTTATCCAAAACAGACTGT+AGG - chr3_2:74794743-74794762 None:intergenic 35.0%
! TTGTCGTAAACAGTTTTCTC+GGG - chr3_2:74794919-74794938 None:intergenic 35.0%
! GTTGTCGTAAACAGTTTTCT+CGG - chr3_2:74794920-74794939 None:intergenic 35.0%
TTTCTTCGCTAGAAATAGCA+GGG + chr3_2:74795057-74795076 Msa0424570:intron 35.0%
TTCATTGGCCAATAATTGGT+AGG + chr3_2:74795185-74795204 Msa0424570:intron 35.0%
GACTATACAAGATTTAAGCC+TGG + chr3_2:74795207-74795226 Msa0424570:intron 35.0%
AGTTATCATTTCAGCTTCAG+AGG + chr3_2:74795360-74795379 Msa0424570:CDS 35.0%
! TCTATTATTTCTTCCTCCGT+TGG - chr3_2:74795389-74795408 None:intergenic 35.0%
TTACATCACGGTATCTTTCA+GGG - chr3_2:74795427-74795446 None:intergenic 35.0%
ATTACATCACGGTATCTTTC+AGG - chr3_2:74795428-74795447 None:intergenic 35.0%
AAGATACCGTGATGTAATGA+AGG + chr3_2:74795430-74795449 Msa0424570:CDS 35.0%
TTGATGCCTTCATTACATCA+CGG - chr3_2:74795439-74795458 None:intergenic 35.0%
TCTTGAATGCAGTGATAGAA+GGG - chr3_2:74795465-74795484 None:intergenic 35.0%
ATTGATAAACTCTTCTTGCG+TGG - chr3_2:74795495-74795514 None:intergenic 35.0%
ACGCAAGAAGAGTTTATCAA+TGG + chr3_2:74795494-74795513 Msa0424570:CDS 35.0%
CGCAAGAAGAGTTTATCAAT+GGG + chr3_2:74795495-74795514 Msa0424570:CDS 35.0%
GCAAGAAGAGTTTATCAATG+GGG + chr3_2:74795496-74795515 Msa0424570:CDS 35.0%
TATCACGAGTTGCTAAAAGT+TGG + chr3_2:74795705-74795724 Msa0424570:intron 35.0%
GATGTTGGAGTATGCAATTA+AGG + chr3_2:74795933-74795952 Msa0424570:intron 35.0%
AAATCATGTCTCATCAAGGA+AGG - chr3_2:74796054-74796073 None:intergenic 35.0%
TCAACGATATCATACTTCCA+TGG + chr3_2:74796164-74796183 Msa0424570:intron 35.0%
CTCAAACTTGAACATCTCTA+GGG + chr3_2:74796327-74796346 Msa0424570:CDS 35.0%
CGTCGCTATGTTGTATAAAT+CGG + chr3_2:74796418-74796437 Msa0424570:exon 35.0%
ATCGTGAGTATTTAAATGGC+CGG - chr3_2:74796532-74796551 None:intergenic 35.0%
TTACATGTAACGTGTATAGG+TGG - chr3_2:74796611-74796630 None:intergenic 35.0%
! TTTTGATGGAGGGTTTCTTG+AGG + chr3_2:74792594-74792613 Msa0424570:intron 40.0%
TTTGATGGAGGGTTTCTTGA+GGG + chr3_2:74792595-74792614 Msa0424570:intron 40.0%
CTGATTAGGCAAACTTGGTA+TGG + chr3_2:74792812-74792831 Msa0424570:exon 40.0%
GTTAACGGTCTCTTCAATAC+AGG - chr3_2:74792909-74792928 None:intergenic 40.0%
CCGTTAACGGTAGCATTTAA+AGG + chr3_2:74792921-74792940 Msa0424570:CDS 40.0%
TAAACAGAATGACACAGCGT+TGG + chr3_2:74792947-74792966 Msa0424570:CDS 40.0%
!!! TTGGCTGTTTTAACTTGCGT+AGG - chr3_2:74792993-74793012 None:intergenic 40.0%
! TATCCTTTTCTTGTGCGTCT+TGG - chr3_2:74793012-74793031 None:intergenic 40.0%
! CATCACATATATCGGTTGTC+GGG - chr3_2:74793157-74793176 None:intergenic 40.0%
! GCATCACATATATCGGTTGT+CGG - chr3_2:74793158-74793177 None:intergenic 40.0%
AGATCAAAAGAGTCTCTCGA+AGG + chr3_2:74793195-74793214 Msa0424570:CDS 40.0%
GATCAAAAGAGTCTCTCGAA+GGG + chr3_2:74793196-74793215 Msa0424570:CDS 40.0%
ATCAAAAGAGTCTCTCGAAG+GGG + chr3_2:74793197-74793216 Msa0424570:CDS 40.0%
GGATTTAAACAGTGATAGGG+TGG + chr3_2:74793247-74793266 Msa0424570:CDS 40.0%
!!! TCCGTTTGGCTTTTGTTTTC+TGG - chr3_2:74793280-74793299 None:intergenic 40.0%
CTCATCAAGATTCATCCGTT+TGG - chr3_2:74793294-74793313 None:intergenic 40.0%
AACGGATGAATCTTGATGAG+AGG + chr3_2:74793294-74793313 Msa0424570:CDS 40.0%
GTGAAGATGTCATTCCAACT+CGG + chr3_2:74793342-74793361 Msa0424570:CDS 40.0%
CTCGGAAAAAAAGAAATCCC+AGG + chr3_2:74793360-74793379 Msa0424570:CDS 40.0%
TCTAAGGGAATACTCAGTAC+CGG + chr3_2:74793409-74793428 Msa0424570:CDS 40.0%
!! CAAGTTGATGCAACCAATGA+AGG + chr3_2:74793508-74793527 Msa0424570:CDS 40.0%
AATGAGCTTCTCACCTTCAT+TGG - chr3_2:74793524-74793543 None:intergenic 40.0%
AGCAAGAAGCTTTCAACCTA+AGG + chr3_2:74793622-74793641 Msa0424570:intron 40.0%
GCAAGAAGCTTTCAACCTAA+GGG + chr3_2:74793623-74793642 Msa0424570:intron 40.0%
TTCAACCTAAGGGCTTAAGT+TGG + chr3_2:74793633-74793652 Msa0424570:intron 40.0%
TTTCATGTTAACTCCCTCTG+AGG + chr3_2:74793689-74793708 Msa0424570:intron 40.0%
AGATGATTTACAGAAGGAGC+TGG + chr3_2:74793996-74794015 Msa0424570:CDS 40.0%
! AGGGATTTAGGACTGAGTAA+CGG + chr3_2:74794242-74794261 Msa0424570:intron 40.0%
!! CTGAGTAACGGTCATTTTCA+TGG + chr3_2:74794254-74794273 Msa0424570:intron 40.0%
ACTTTGATGGAGAAACTCGA+TGG + chr3_2:74794359-74794378 Msa0424570:intron 40.0%
! ATCTTTTGCAGCACAATCTC+CGG + chr3_2:74794578-74794597 Msa0424570:intron 40.0%
! CAGATTTTGCTAATAGCCCA+AGG + chr3_2:74794632-74794651 Msa0424570:CDS 40.0%
TTTCAAGATCTTTGTCAGGC+TGG + chr3_2:74794655-74794674 Msa0424570:CDS 40.0%
!! TTGATCGTTTTGAGCCAAAC+CGG + chr3_2:74794701-74794720 Msa0424570:CDS 40.0%
CTTTCTTCGCTAGAAATAGC+AGG + chr3_2:74795056-74795075 Msa0424570:intron 40.0%
CAAGTAGCTGAGACTGAAAA+TGG - chr3_2:74795123-74795142 None:intergenic 40.0%
TTCAGTCTCAGCTACTTGTA+AGG + chr3_2:74795125-74795144 Msa0424570:intron 40.0%
TCAGTCTCAGCTACTTGTAA+GGG + chr3_2:74795126-74795145 Msa0424570:intron 40.0%
!! TTGATTGATTTGGGTGTGTC+TGG + chr3_2:74795286-74795305 Msa0424570:intron 40.0%
TACATCACGGTATCTTTCAG+GGG - chr3_2:74795426-74795445 None:intergenic 40.0%
CTTGAATGCAGTGATAGAAG+GGG - chr3_2:74795464-74795483 None:intergenic 40.0%
GTCTTGAATGCAGTGATAGA+AGG - chr3_2:74795466-74795485 None:intergenic 40.0%
! ATCAATGGGGTTGTTGATGA+TGG + chr3_2:74795509-74795528 Msa0424570:CDS 40.0%
!! TGCTCTTGATGATGTGGTAA+TGG + chr3_2:74795577-74795596 Msa0424570:intron 40.0%
TCATTACACTTGCTCGAACT+TGG - chr3_2:74795828-74795847 None:intergenic 40.0%
ACATCGTCATTGTGTGTGTT+GGG - chr3_2:74795918-74795937 None:intergenic 40.0%
AACATCGTCATTGTGTGTGT+TGG - chr3_2:74795919-74795938 None:intergenic 40.0%
AACACACACAATGACGATGT+TGG + chr3_2:74795918-74795937 Msa0424570:intron 40.0%
GTTGGAGTATGCAATTAAGG+CGG + chr3_2:74795936-74795955 Msa0424570:intron 40.0%
TCAAGGAAGGACACCAAATA+TGG - chr3_2:74796041-74796060 None:intergenic 40.0%
! AGGTTTGGACTTGATGGTAA+GGG + chr3_2:74796280-74796299 Msa0424570:CDS 40.0%
! CCTAGAGATGTTCAAGTTTG+AGG - chr3_2:74796329-74796348 None:intergenic 40.0%
CCTCAAACTTGAACATCTCT+AGG + chr3_2:74796326-74796345 Msa0424570:CDS 40.0%
! CTTGAACATCTCTAGGGAAA+TGG + chr3_2:74796333-74796352 Msa0424570:CDS 40.0%
ACTATGTGACTAGGTAAGGT+GGG - chr3_2:74796490-74796509 None:intergenic 40.0%
TACTATGTGACTAGGTAAGG+TGG - chr3_2:74796491-74796510 None:intergenic 40.0%
CTCTACTATGTGACTAGGTA+AGG - chr3_2:74796494-74796513 None:intergenic 40.0%
CATCACTCTACTATGTGACT+AGG - chr3_2:74796499-74796518 None:intergenic 40.0%
! AGAGTGATGATTTGCATCAC+CGG + chr3_2:74796510-74796529 Msa0424570:three_prime_UTR 40.0%
! TGATGACATTGTGCTGTTGC+AGG + chr3_2:74792746-74792765 Msa0424570:intron 45.0%
! ATTGTGCTGTTGCAGGAACT+TGG + chr3_2:74792753-74792772 Msa0424570:intron 45.0%
ACGGTCTCTTCAATACAGGA+TGG - chr3_2:74792905-74792924 None:intergenic 45.0%
GAGACAGCTCTTGGTTTCTT+AGG - chr3_2:74793053-74793072 None:intergenic 45.0%
TCTCGAAGGGGTAAGAAGAT+TGG + chr3_2:74793209-74793228 Msa0424570:CDS 45.0%
!! ATACTCAGTACCGGCTGATT+TGG + chr3_2:74793418-74793437 Msa0424570:CDS 45.0%
TCTAGACTGACCAAATCAGC+CGG - chr3_2:74793431-74793450 None:intergenic 45.0%
!! CTGATTTGGTCAGTCTAGAC+TGG + chr3_2:74793432-74793451 Msa0424570:CDS 45.0%
AAAAACGCATGCTCCGAAGA+AGG - chr3_2:74793485-74793504 None:intergenic 45.0%
ACTTGCCAACTTAAGCCCTT+AGG - chr3_2:74793641-74793660 None:intergenic 45.0%
! CTTCAAGTTCAGACCTCAGA+GGG - chr3_2:74793705-74793724 None:intergenic 45.0%
TTCCAGCGACTTGATAAGCA+AGG + chr3_2:74793838-74793857 Msa0424570:intron 45.0%
TTCCTTGCTTATCAAGTCGC+TGG - chr3_2:74793843-74793862 None:intergenic 45.0%
! TCAGCTATTTCATCCTCCGT+AGG - chr3_2:74794030-74794049 None:intergenic 45.0%
TGATCACGAACAAGACAAGC+CGG - chr3_2:74794600-74794619 None:intergenic 45.0%
TCTTTGTCAGGCTGGAGTTA+AGG + chr3_2:74794663-74794682 Msa0424570:CDS 45.0%
CTTTGTCAGGCTGGAGTTAA+GGG + chr3_2:74794664-74794683 Msa0424570:CDS 45.0%
TTGAGCCAAACCGGAGATTT+CGG + chr3_2:74794710-74794729 Msa0424570:CDS 45.0%
AGGTTGAAAGCCGAAATCTC+CGG - chr3_2:74794723-74794742 None:intergenic 45.0%
TGTTCCCTTTGGACTTGAGT+CGG + chr3_2:74794804-74794823 Msa0424570:CDS 45.0%
!! CATACCGACTCAAGTCCAAA+GGG - chr3_2:74794811-74794830 None:intergenic 45.0%
!! ACATACCGACTCAAGTCCAA+AGG - chr3_2:74794812-74794831 None:intergenic 45.0%
!! AATGGGGTTGTTGATGATGG+TGG + chr3_2:74795512-74795531 Msa0424570:CDS 45.0%
!! GTTGATGATGGTGGTGTTGA+TGG + chr3_2:74795521-74795540 Msa0424570:CDS 45.0%
!! GTGTTGATGGCGATAACAGA+AGG + chr3_2:74795534-74795553 Msa0424570:CDS 45.0%
!! AAGGCTTGCTCTTGATGATG+TGG + chr3_2:74795571-74795590 Msa0424570:CDS 45.0%
ATGCAATTAAGGCGGCCTAA+AGG + chr3_2:74795944-74795963 Msa0424570:intron 45.0%
CTAAGAGGGACAAATGACCA+TGG - chr3_2:74796184-74796203 None:intergenic 45.0%
!! GCTTGATTCTCTGAAGCCTA+AGG + chr3_2:74796237-74796256 Msa0424570:intron 45.0%
! TCTGAAGCCTAAGGAGAACT+TGG + chr3_2:74796246-74796265 Msa0424570:CDS 45.0%
CTGATCACCAAGTTCTCCTT+AGG - chr3_2:74796256-74796275 None:intergenic 45.0%
! AGAACTTGGTGATCAGACAG+AGG + chr3_2:74796260-74796279 Msa0424570:CDS 45.0%
! TTGGTGATCAGACAGAGGTT+TGG + chr3_2:74796265-74796284 Msa0424570:CDS 45.0%
AGACAGAGGTTTGGACTTGA+TGG + chr3_2:74796274-74796293 Msa0424570:CDS 45.0%
! GAGGTTTGGACTTGATGGTA+AGG + chr3_2:74796279-74796298 Msa0424570:CDS 45.0%
TGGTAAGGGTGACAGAACTT+TGG + chr3_2:74796294-74796313 Msa0424570:CDS 45.0%
GGTAAGGGTGACAGAACTTT+GGG + chr3_2:74796295-74796314 Msa0424570:CDS 45.0%
TACAGAAATACATGTGCCCG+TGG + chr3_2:74796460-74796479 Msa0424570:three_prime_UTR 45.0%
CTGTTTCAAGCTCAGCTGCT+CGG + chr3_2:74792844-74792863 Msa0424570:CDS 50.0%
CAGCCAAGACGCACAAGAAA+AGG + chr3_2:74793006-74793025 Msa0424570:CDS 50.0%
ACCTCCAGTTCTGCCTTCTT+CGG + chr3_2:74793469-74793488 Msa0424570:CDS 50.0%
!! GGGCTTAAGTTGGCAAGTCA+AGG + chr3_2:74793643-74793662 Msa0424570:intron 50.0%
! CCTTCAAGTTCAGACCTCAG+AGG - chr3_2:74793706-74793725 None:intergenic 50.0%
!! CCTCTGAGGTCTGAACTTGA+AGG + chr3_2:74793703-74793722 Msa0424570:intron 50.0%
GAAAGCCGAAATCTCCGGTT+TGG - chr3_2:74794718-74794737 None:intergenic 50.0%
AACACGTGAGAAGCTTGCGA+GGG - chr3_2:74794788-74794807 None:intergenic 50.0%
AGCTTCTCACGTGTTCCCTT+TGG + chr3_2:74794793-74794812 Msa0424570:CDS 50.0%
TCAGCTTCAGAGGTCACCAA+CGG + chr3_2:74795370-74795389 Msa0424570:CDS 50.0%
GAAGGCAACCTGCTCTACTA+AGG + chr3_2:74795552-74795571 Msa0424570:CDS 50.0%
AGAGCAAGCCTTAGTAGAGC+AGG - chr3_2:74795563-74795582 None:intergenic 50.0%
GTCATTGTGTGTGTTGGGTG+TGG - chr3_2:74795913-74795932 None:intergenic 50.0%
! GGTGAGAAAGCACGAAGTCA+AGG + chr3_2:74796354-74796373 Msa0424570:CDS 50.0%
GCTCAAGCATTCAGCTCGAT+TGG + chr3_2:74796387-74796406 Msa0424570:CDS 50.0%
TAGGTAAGGTGGGACTACCA+CGG - chr3_2:74796480-74796499 None:intergenic 50.0%
ACCAAGAGCTGTCTCCACTG+AGG + chr3_2:74793058-74793077 Msa0424570:CDS 55.0%
TCCTCAGTGGAGACAGCTCT+TGG - chr3_2:74793062-74793081 None:intergenic 55.0%
TCCGAAGAAGGCAGAACTGG+AGG - chr3_2:74793473-74793492 None:intergenic 55.0%
TGCTCCGAAGAAGGCAGAAC+TGG - chr3_2:74793476-74793495 None:intergenic 55.0%
GGAGCTGGAAAGAGAGCCTA+CGG + chr3_2:74794011-74794030 Msa0424570:CDS 55.0%
AGCTTGCGAGGGTCATGGAA+CGG - chr3_2:74794777-74794796 None:intergenic 55.0%
TGAGAAGCTTGCGAGGGTCA+TGG - chr3_2:74794782-74794801 None:intergenic 55.0%
GAACACGTGAGAAGCTTGCG+AGG - chr3_2:74794789-74794808 None:intergenic 55.0%
CAGCCTTAGCTGAGGCCTTT+AGG - chr3_2:74795962-74795981 None:intergenic 55.0%
AGGTAAGGTGGGACTACCAC+GGG - chr3_2:74796479-74796498 None:intergenic 55.0%
TCAGCTGCTCGGACTCCACT+AGG + chr3_2:74792855-74792874 Msa0424570:CDS 60.0%
GCTGGAAAGAGAGCCTACGG+AGG + chr3_2:74794014-74794033 Msa0424570:CDS 60.0%
GCTTCAGAGGTCACCAACGG+AGG + chr3_2:74795373-74795392 Msa0424570:CDS 60.0%
CGGCCTAAAGGCCTCAGCTA+AGG + chr3_2:74795956-74795975 Msa0424570:intron 60.0%
AGGCCTCAGCTAAGGCTGCT+TGG + chr3_2:74795964-74795983 Msa0424570:intron 60.0%
GGCCTCAGCTAAGGCTGCTT+GGG + chr3_2:74795965-74795984 Msa0424570:intron 60.0%
GCCTCAGCTAAGGCTGCTTG+GGG + chr3_2:74795966-74795985 Msa0424570:intron 60.0%
ACCCCAAGCAGCCTTAGCTG+AGG - chr3_2:74795970-74795989 None:intergenic 60.0%
TCAGCTAAGGCTGCTTGGGG+TGG + chr3_2:74795969-74795988 Msa0424570:intron 60.0%
Chromosome Type Strat End Strand Name
chr3_2 gene 74792108 74796722 74792108 ID=Msa0424570;Name=Msa0424570
chr3_2 mRNA 74792108 74796722 74792108 ID=Msa0424570-mRNA-1;Parent=Msa0424570;Name=Msa0424570-mRNA-1;_AED=0.12;_eAED=0.12;_QI=168|1|1|1|0.8|0.66|6|287|514
chr3_2 exon 74792108 74792212 74792108 ID=Msa0424570-mRNA-1:exon:18970;Parent=Msa0424570-mRNA-1
chr3_2 exon 74792768 74793529 74792768 ID=Msa0424570-mRNA-1:exon:18971;Parent=Msa0424570-mRNA-1
chr3_2 exon 74793979 74794125 74793979 ID=Msa0424570-mRNA-1:exon:18972;Parent=Msa0424570-mRNA-1
chr3_2 exon 74794589 74794825 74794589 ID=Msa0424570-mRNA-1:exon:18973;Parent=Msa0424570-mRNA-1
chr3_2 exon 74795329 74795592 74795329 ID=Msa0424570-mRNA-1:exon:18974;Parent=Msa0424570-mRNA-1
chr3_2 exon 74796238 74796722 74796238 ID=Msa0424570-mRNA-1:exon:18975;Parent=Msa0424570-mRNA-1
chr3_2 five_prime_UTR 74792108 74792212 74792108 ID=Msa0424570-mRNA-1:five_prime_utr;Parent=Msa0424570-mRNA-1
chr3_2 five_prime_UTR 74792768 74792830 74792768 ID=Msa0424570-mRNA-1:five_prime_utr;Parent=Msa0424570-mRNA-1
chr3_2 CDS 74792831 74793529 74792831 ID=Msa0424570-mRNA-1:cds;Parent=Msa0424570-mRNA-1
chr3_2 CDS 74793979 74794125 74793979 ID=Msa0424570-mRNA-1:cds;Parent=Msa0424570-mRNA-1
chr3_2 CDS 74794589 74794825 74794589 ID=Msa0424570-mRNA-1:cds;Parent=Msa0424570-mRNA-1
chr3_2 CDS 74795329 74795592 74795329 ID=Msa0424570-mRNA-1:cds;Parent=Msa0424570-mRNA-1
chr3_2 CDS 74796238 74796435 74796238 ID=Msa0424570-mRNA-1:cds;Parent=Msa0424570-mRNA-1
chr3_2 three_prime_UTR 74796436 74796722 74796436 ID=Msa0424570-mRNA-1:three_prime_utr;Parent=Msa0424570-mRNA-1
Gene Sequence

>Msa0424570

ATGGGAGTTGTGACTGTTTCAAGCTCAGCTGCTCGGACTCCACTAGGATTGAATACAAAGTTTTCAACTCACCATCCTGTATTGAAGAGACCGTTAACGGTAGCATTTAAAGGAGATAAACAGAATGACACAGCGTTGGTTGCGACTCAAGAGAAAATTCCTACGCAAGTTAAAACAGCCAAGACGCACAAGAAAAGGATAGCAAAAACGAATAAACTACCTAAGAAACCAAGAGCTGTCTCCACTGAGGAAAATTTTCCATCTTCATTGGATGTGGATTATAACGAAGCTGCTGCCATACTTGAAAATATATACAAACTTAGCCCGACAACCGATATATGTGATGCAGATTATATAGAACGTAAGATCAAAAGAGTCTCTCGAAGGGGTAAGAAGATTGGTGATGTAAGTAAAGAGGATTTAAACAGTGATAGGGTGGTCCGAAACCAGAAAACAAAAGCCAAACGGATGAATCTTGATGAGAGGATTGCGTTAAAAACGAGCGACAATAGTGAAGATGTCATTCCAACTCGGAAAAAAAGAAATCCCAGGAGTAGAATTGAGAAGATTGACGAACTTCTAAGGGAATACTCAGTACCGGCTGATTTGGTCAGTCTAGACTGGAAAAAAATGAAAATACCTCCAGTTCTGCCTTCTTCGGAGCATGCGTTTTTGTTCAAGTTGATGCAACCAATGAAGGCACTCCTTCAAGTGAAAGATGATTTACAGAAGGAGCTGGAAAGAGAGCCTACGGAGGATGAAATAGCTGACGCAACAAACATGCGCACTACTCAAGTAAAGAAAGCAATAGAGGTTGGTCGAGCTGCAAGAAATAAGCTAATAAAGCACAATCTCCGGCTTGTCTTGTTCGTGATCAACAGATATTTTTCAGATTTTGCTAATAGCCCAAGGTTTCAAGATCTTTGTCAGGCTGGAGTTAAGGGACTTATAACATCAATTGATCGTTTTGAGCCAAACCGGAGATTTCGGCTTTCAACCTACAGTCTGTTTTGGATAAGACATTCTATCATCCGTTCCATGACCCTCGCAAGCTTCTCACGTGTTCCCTTTGGACTTGAGTCGGTTAGAGCAGAGATCCGAAGAGCTAAGATTGAGTTATCATTTCAGCTTCAGAGGTCACCAACGGAGGAAGAAATAATAGAAAAAGTTCATGTATCCCCTGAAAGATACCGTGATGTAATGAAGGCATCAAAACCCCTTCTATCACTGCATTCAAGACATCTAACCACGCAAGAAGAGTTTATCAATGGGGTTGTTGATGATGGTGGTGTTGATGGCGATAACAGAAGGCAACCTGCTCTACTAAGGCTTGCTCTTGATGATGTGCTTGATTCTCTGAAGCCTAAGGAGAACTTGGTGATCAGACAGAGGTTTGGACTTGATGGTAAGGGTGACAGAACTTTGGGAGAAATTGCCTCAAACTTGAACATCTCTAGGGAAATGGTGAGAAAGCACGAAGTCAAGGCTCTCATGAAGCTCAAGCATTCAGCTCGATTGGATTATCTTCGTCGCTATGTTGTATAA

Protein sequence

>Msa0424570

MGVVTVSSSAARTPLGLNTKFSTHHPVLKRPLTVAFKGDKQNDTALVATQEKIPTQVKTAKTHKKRIAKTNKLPKKPRAVSTEENFPSSLDVDYNEAAAILENIYKLSPTTDICDADYIERKIKRVSRRGKKIGDVSKEDLNSDRVVRNQKTKAKRMNLDERIALKTSDNSEDVIPTRKKRNPRSRIEKIDELLREYSVPADLVSLDWKKMKIPPVLPSSEHAFLFKLMQPMKALLQVKDDLQKELEREPTEDEIADATNMRTTQVKKAIEVGRAARNKLIKHNLRLVLFVINRYFSDFANSPRFQDLCQAGVKGLITSIDRFEPNRRFRLSTYSLFWIRHSIIRSMTLASFSRVPFGLESVRAEIRRAKIELSFQLQRSPTEEEIIEKVHVSPERYRDVMKASKPLLSLHSRHLTTQEEFINGVVDDGGVDGDNRRQPALLRLALDDVLDSLKPKENLVIRQRFGLDGKGDRTLGEIASNLNISREMVRKHEVKALMKLKHSARLDYLRRYVV*