AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0066890


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0066890 MtrunA17_Chr1g0169361 88.136 354 1 2 1 313 1 354 0.0 611
Msa0066890 MtrunA17_Chr4g0012061 43.056 216 102 1 111 305 100 315 9.18e-50 176
Msa0066890 MtrunA17_Chr7g0230671 42.130 216 104 1 111 305 88 303 3.73e-43 157
Msa0066890 MtrunA17_Chr6g0465161 37.168 226 122 1 112 317 78 303 1.23e-40 150
Msa0066890 MtrunA17_Chr1g0148121 39.535 215 107 4 127 319 95 308 4.23e-36 137
Msa0066890 MtrunA17_Chr3g0136721 44.512 164 70 3 162 305 134 296 1.14e-35 136
Msa0066890 MtrunA17_Chr1g0199921 35.102 245 128 6 91 305 118 361 1.07e-30 122
Msa0066890 MtrunA17_Chr3g0120791 40.625 160 71 2 166 302 204 362 9.52e-29 116
Msa0066890 MtrunA17_Chr8g0382921 36.747 166 79 2 166 307 198 361 2.48e-26 109
Msa0066890 MtrunA17_Chr3g0129101 35.754 179 87 3 153 307 196 370 1.79e-25 107
Msa0066890 MtrunA17_Chr5g0428451 27.329 161 95 1 164 302 126 286 7.75e-15 75.1
Msa0066890 MtrunA17_Chr4g0057941 31.707 123 82 2 156 278 62 182 1.40e-12 68.2
Msa0066890 MtrunA17_Chr1g0147481 29.677 155 89 4 163 298 124 277 5.13e-12 67.0
Msa0066890 MtrunA17_Chr4g0048521 28.931 159 101 4 174 321 229 386 2.59e-11 64.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0066890 AT3G24190.1 69.890 362 60 5 1 313 1 362 3.41e-155 454
Msa0066890 AT1G79600.1 37.449 243 126 2 84 305 73 310 7.13e-44 160
Msa0066890 AT1G71810.1 38.140 215 111 4 112 305 69 282 2.22e-39 147
Msa0066890 AT4G31390.1 38.049 205 105 1 127 309 131 335 3.23e-36 138
Msa0066890 AT5G24970.3 45.238 168 71 3 162 309 136 302 7.47e-35 134
Msa0066890 AT5G24970.2 45.238 168 71 3 162 309 175 341 1.02e-34 134
Msa0066890 AT4G31390.2 38.298 188 94 1 127 292 131 318 3.05e-33 129
Msa0066890 AT5G24970.1 43.452 168 71 4 162 309 136 299 8.26e-31 122
Msa0066890 AT2G39190.1 31.522 276 156 6 58 311 100 364 5.77e-30 117
Msa0066890 AT2G39190.2 31.970 269 152 5 58 304 100 359 4.52e-29 117
Msa0066890 AT3G07700.1 39.444 180 83 3 148 302 171 349 1.35e-28 116
Msa0066890 AT3G07700.2 39.444 180 83 3 148 302 171 349 1.35e-28 116
Msa0066890 AT3G07700.4 39.444 180 83 3 148 302 171 349 1.35e-28 116
Msa0066890 AT3G07700.3 39.444 180 83 3 148 302 171 349 1.54e-28 116
Msa0066890 AT5G64940.1 36.047 172 83 3 166 313 222 390 3.60e-24 103
Msa0066890 AT5G64940.2 36.047 172 83 3 166 313 222 390 3.60e-24 103
Msa0066890 AT4G31390.3 41.176 136 58 1 196 309 1 136 5.40e-23 99.4
Msa0066890 AT5G05200.1 25.623 281 173 7 58 307 17 292 5.02e-16 79.0
Msa0066890 AT4G24810.5 30.894 123 83 2 156 278 16 136 2.19e-13 70.1
Msa0066890 AT4G24810.4 30.894 123 83 2 156 278 16 136 2.34e-13 70.1
Msa0066890 AT4G24810.2 30.894 123 83 2 156 278 59 179 3.17e-13 70.5
Msa0066890 AT4G24810.3 30.894 123 83 2 156 278 16 136 3.42e-13 70.5
Msa0066890 AT4G24810.6 30.894 123 83 2 156 278 16 136 3.72e-13 70.1
Msa0066890 AT4G24810.1 30.894 123 83 2 156 278 16 136 3.72e-13 70.1
Msa0066890 AT1G61640.3 30.000 160 98 4 174 321 221 378 1.12e-11 65.9
Msa0066890 AT1G61640.1 30.000 160 98 4 174 321 221 378 1.50e-11 65.5
Msa0066890 AT1G61640.2 30.000 160 98 4 174 321 221 378 1.58e-11 65.5
Msa0066890 AT1G11390.1 28.931 159 101 4 174 321 224 381 3.02e-11 64.7
Msa0066890 AT5G24810.1 30.968 155 87 4 163 298 98 251 3.11e-11 64.7

Find 112 sgRNAs with CRISPR-Local

Find 245 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AGCTAGTATTACTGCATATT+GGG 0.247428 1_2:-31027762 Msa0066890:CDS
ATCTCTCGGACAGGTATATA+AGG 0.270512 1_2:-31025875 Msa0066890:CDS
TCTTTATCTTACTAGGTATT+CGG 0.270868 1_2:+31025327 None:intergenic
AAACCTGTCAACGGTGTCTC+TGG 0.278838 1_2:-31028586 Msa0066890:CDS
AAGGGCCGCCTGAAGGAAAA+TGG 0.288141 1_2:-31025856 Msa0066890:CDS
CAGCTAGTATTACTGCATAT+TGG 0.297042 1_2:-31027763 Msa0066890:CDS
ACGTGAAATTGTGACATCTT+TGG 0.305343 1_2:-31026701 Msa0066890:CDS
CAGAAGTTCTTGGTGGAATC+TGG 0.330283 1_2:-31025365 Msa0066890:three_prime_UTR
CGTGAAATTGTGACATCTTT+GGG 0.332945 1_2:-31026700 Msa0066890:CDS
TTTATTTGCATTCAGAGAAT+TGG 0.338434 1_2:-31028490 Msa0066890:intron
CCTGAAGGAAAATGGGGATT+TGG 0.353495 1_2:-31025848 Msa0066890:CDS
GGTTGTTGTGGCGGTTGGAA+TGG 0.357492 1_2:+31028716 None:intergenic
TTACACTAAGCAGAAGTTCT+TGG 0.366474 1_2:-31025375 Msa0066890:three_prime_UTR
GTTGTTGTGGCGGTTGGAAT+GGG 0.367238 1_2:+31028717 None:intergenic
GAGAGAGGGTTTGGAGGGAG+TGG 0.374407 1_2:+31028877 None:intergenic
CTTTATCTTACTAGGTATTC+GGG 0.376810 1_2:+31025328 None:intergenic
AGGGAGGTTGTTGTGGCGGT+TGG 0.379114 1_2:+31028711 None:intergenic
CAGGTCTTTCTTCATCATTT+CGG 0.380540 1_2:+31025473 None:intergenic
GTTGTAACCGGAGCAGGTTT+AGG 0.383753 1_2:+31028643 None:intergenic
AGGTCTCCATTGACGTGGTT+GGG 0.391236 1_2:-31025572 Msa0066890:CDS
TTATCGTTCTTTATCTTACT+AGG 0.395780 1_2:+31025320 None:intergenic
GTGCAGTTATTATCTGTTGC+TGG 0.398582 1_2:-31027707 Msa0066890:CDS
CCGTCAACGGTTCTTCTTCA+AGG 0.412132 1_2:-31028621 Msa0066890:CDS
AGAGACACCGTTGACAGGTT+TGG 0.413955 1_2:+31028588 None:intergenic
TATGTGAATGAAGGTGAAAA+TGG 0.419960 1_2:-31025507 Msa0066890:CDS
TAAGAGAGTGAGAGCGCAAA+TGG 0.424054 1_2:-31028449 Msa0066890:CDS
TAGGTCTCCATTGACGTGGT+TGG 0.426485 1_2:-31025573 Msa0066890:CDS
GAACCGTTGACGGTTGTAAC+CGG 0.426598 1_2:+31028631 None:intergenic
TGGAAAGCTACCGGCGGCAA+TGG 0.437249 1_2:+31026006 None:intergenic
GGTCCAGCATACATAAAACT+TGG 0.438925 1_2:-31026679 Msa0066890:CDS
TACTGACGTAAAACAGATAG+TGG 0.450355 1_2:+31025399 None:intergenic
GCTGCAGGTGACAGTATATC+AGG 0.453190 1_2:+31026637 None:intergenic
AATGGAAGAAGATGAACAAT+TGG 0.455274 1_2:-31028431 Msa0066890:CDS
TTCTCGGGTTGCGTGGGATG+TGG 0.458420 1_2:-31027675 Msa0066890:CDS
TGCAACTCTGTCATTGCTGC+AGG 0.460173 1_2:+31026622 None:intergenic
ATAACCAGAATGAGGTTGCC+AGG 0.461543 1_2:-31026735 Msa0066890:intron
ATTTGCAGATGATGTGGCTA+TGG 0.471517 1_2:-31026092 Msa0066890:CDS
CACTAAGCAGAAGTTCTTGG+TGG 0.478914 1_2:-31025372 Msa0066890:three_prime_UTR
CTCCATTGACGTGGTTGGGT+TGG 0.481448 1_2:-31025568 Msa0066890:CDS
AGGGCCGCCTGAAGGAAAAT+GGG 0.482279 1_2:-31025855 Msa0066890:CDS
CATAAGAAATAAGAAAGTAT+TGG 0.482449 1_2:+31025438 None:intergenic
AACCAACCCAACCACGTCAA+TGG 0.482943 1_2:+31025566 None:intergenic
CCTTGAAGAAGAACCGTTGA+CGG 0.483993 1_2:+31028621 None:intergenic
TTGACGGTTGTAACCGGAGC+AGG 0.484211 1_2:+31028637 None:intergenic
GTAACTGTCTCGAGAACAAA+AGG 0.487145 1_2:+31025805 None:intergenic
AACCTGTCAACGGTGTCTCT+GGG 0.487214 1_2:-31028585 Msa0066890:CDS
ACACCGTTGACAGGTTTGGC+AGG 0.488797 1_2:+31028592 None:intergenic
CACCGATCCTAAACCTGCTC+CGG 0.497252 1_2:-31028650 Msa0066890:CDS
GGTTGGGTTGGTTGACGAGT+GGG 0.502534 1_2:-31025556 Msa0066890:CDS
AACGATAAAATACTCTATCA+AGG 0.503344 1_2:-31025305 None:intergenic
GGAAAGCTACCGGCGGCAAT+GGG 0.509268 1_2:+31026007 None:intergenic
TTCACGTATTTCAATAGCCC+TGG 0.512127 1_2:+31026717 None:intergenic
CAATATGCAGTAATACTAGC+TGG 0.516377 1_2:+31027764 None:intergenic
GCTCTAATTGAAGAGGAACT+TGG 0.518860 1_2:-31026070 Msa0066890:CDS
CGGTGGCGACAGCGGAGATA+CGG 0.520949 1_2:+31028668 None:intergenic
ACCCCAGAGACACCGTTGAC+AGG 0.523907 1_2:+31028583 None:intergenic
TCTCTCGGACAGGTATATAA+GGG 0.528745 1_2:-31025874 Msa0066890:CDS
GACGGAGAGGGAGGTTGTTG+TGG 0.530054 1_2:+31028704 None:intergenic
TCCTTCATTTGCAGATGATG+TGG 0.531156 1_2:-31026098 Msa0066890:CDS
GGTTAACAAGAAGGTTAAAG+AGG 0.535906 1_2:-31027654 Msa0066890:intron
GTGGGATGTGGTTAACAAGA+AGG 0.539335 1_2:-31027663 Msa0066890:CDS
GAGAATTGGTGATGTTTCGA+AGG 0.539608 1_2:-31028476 Msa0066890:CDS
GCTACCGGCGGCAATGGGAG+AGG 0.540075 1_2:+31026012 None:intergenic
TACGGTTAGAACGGCGGCGA+CGG 0.541492 1_2:+31028686 None:intergenic
GCCACATCATCTGCAAATGA+AGG 0.542980 1_2:+31026097 None:intergenic
GTATTGGACTCACCTGTGGC+AGG 0.546086 1_2:+31025454 None:intergenic
TAGAACGGCGGCGACGGAGA+GGG 0.547608 1_2:+31028692 None:intergenic
CCGCCTGCCAAACCTGTCAA+CGG 0.550645 1_2:-31028595 Msa0066890:CDS
TGGTTGGGTTGGTTGACGAG+TGG 0.551378 1_2:-31025557 Msa0066890:CDS
TCTTCATCATTTCGGCGAAG+CGG 0.553476 1_2:+31025481 None:intergenic
ATATGCAGCATCTCTCGGAC+AGG 0.554501 1_2:-31025884 Msa0066890:intron
AAGTAGTGAATTTCTACCAT+TGG 0.554621 1_2:-31027795 Msa0066890:CDS
GGTATATAAGGGCCGCCTGA+AGG 0.559240 1_2:-31025863 Msa0066890:CDS
GAATGGGAAGAGCGAAGTAA+AGG 0.560262 1_2:+31028733 None:intergenic
TCTCTTATGAGAGGTCTTCG+TGG 0.564239 1_2:-31028406 Msa0066890:intron
TTGTGATGATGCTGTATCCA+TGG 0.565765 1_2:+31028777 None:intergenic
ATGCGAGTTGCAACGGAGCG+AGG 0.567245 1_2:+31027731 None:intergenic
CTGCACAATGCGAGTTGCAA+CGG 0.568797 1_2:+31027724 None:intergenic
AACGGCGGCGACGGAGAGGG+AGG 0.573158 1_2:+31028695 None:intergenic
AAGAGGAACTTGGTCAGCCA+TGG 0.574058 1_2:-31026060 Msa0066890:CDS
GAAACATATGCAGCATCTCT+CGG 0.574141 1_2:-31025889 Msa0066890:intron
CCGTTGACAGGTTTGGCAGG+CGG 0.583407 1_2:+31028595 None:intergenic
GGCTATGGCTCTAATTGAAG+AGG 0.600972 1_2:-31026077 Msa0066890:CDS
TCAACCTCTCCCATTGCCGC+CGG 0.601960 1_2:-31026016 Msa0066890:intron
CAATTGGCTTCTCTTATGAG+AGG 0.605225 1_2:-31028415 Msa0066890:CDS
TGTGGAAGTTGTTGTATGTG+TGG 0.606184 1_2:+31028914 None:intergenic
GTGGTTGTTGTAAAGAAGTG+TGG 0.608871 1_2:+31028896 None:intergenic
TAACCAGAATGAGGTTGCCA+GGG 0.609399 1_2:-31026734 Msa0066890:intron
AACCGGAGCAGGTTTAGGAT+CGG 0.611732 1_2:+31028648 None:intergenic
CGGAGCAGGTTTAGGATCGG+TGG 0.613125 1_2:+31028651 None:intergenic
GCTAGTATTACTGCATATTG+GGG 0.615592 1_2:-31027761 Msa0066890:CDS
CAGTTATTATCTGTTGCTGG+AGG 0.617050 1_2:-31027704 Msa0066890:CDS
CAGCGGAGATACGGTTAGAA+CGG 0.617745 1_2:+31028677 None:intergenic
GAGTTAGACTATGTGAATGA+AGG 0.620549 1_2:-31025516 Msa0066890:CDS
TTTAGGATCGGTGGCGACAG+CGG 0.620973 1_2:+31028660 None:intergenic
GGAGAGGGAGGTTGTTGTGG+CGG 0.621652 1_2:+31028707 None:intergenic
GCTCCGGTTACAACCGTCAA+CGG 0.622992 1_2:-31028634 Msa0066890:CDS
GTCCAGCATACATAAAACTT+GGG 0.627157 1_2:-31026678 Msa0066890:CDS
ACCTGTCAACGGTGTCTCTG+GGG 0.632413 1_2:-31028584 Msa0066890:intron
TTAGAACGGCGGCGACGGAG+AGG 0.642104 1_2:+31028691 None:intergenic
GATGAAGAAAGACCTGCCAC+AGG 0.643598 1_2:-31025466 Msa0066890:CDS
CTAGCTGGATCATACACCAA+TGG 0.649269 1_2:+31027779 None:intergenic
GAGTAAACAGCATTCCACCA+TGG 0.656893 1_2:-31028794 Msa0066890:exon
GAAAGTATTGGACTCACCTG+TGG 0.658060 1_2:+31025450 None:intergenic
CGGAGATACGGTTAGAACGG+CGG 0.667966 1_2:+31028680 None:intergenic
GGGCCGCCTGAAGGAAAATG+GGG 0.676507 1_2:-31025854 Msa0066890:CDS
AAGAAGAAAACAGAACAGAG+AGG 0.677958 1_2:-31028818 Msa0066890:five_prime_UTR
GAAGTAAAGGATCGATTCCG+CGG 0.682638 1_2:+31028746 None:intergenic
GTGTGGTGCGAAGTGTGACA+AGG 0.700349 1_2:+31028931 None:intergenic
TATCTTACTAGGTATTCGGG+AGG 0.701137 1_2:+31025331 None:intergenic
TGATGATGCTGTATCCATGG+TGG 0.715506 1_2:+31028780 None:intergenic
TCATCACAACTCATCTACCG+CGG 0.718824 1_2:-31028763 Msa0066890:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AATATTTATTCAATGAATTT+TGG + chr1_2:31026249-31026268 None:intergenic 10.0%
!! AAAAAAAATAGAAATATCAT+AGG + chr1_2:31026300-31026319 None:intergenic 10.0%
!! ATAAATATTTAGATATTAGT+CGG - chr1_2:31027062-31027081 Msa0066890:intron 10.0%
!!! TTTTTAATTTCTTGCATATT+TGG - chr1_2:31027129-31027148 Msa0066890:intron 15.0%
!! ATAAGTTTCAATTATCTAAA+AGG + chr1_2:31027447-31027466 None:intergenic 15.0%
!! AAGAAAGTAATATATCAAAA+TGG + chr1_2:31028268-31028287 None:intergenic 15.0%
!! ATGGAAATGTCATATATTTA+TGG + chr1_2:31026323-31026342 None:intergenic 20.0%
!!! GATAAATTTGTTTTGATTTG+AGG - chr1_2:31026942-31026961 Msa0066890:intron 20.0%
!! CGATATAGATTCATTTAAAA+AGG + chr1_2:31027726-31027745 None:intergenic 20.0%
!!! AAGTTATTAACTTTTTTCTC+TGG + chr1_2:31027772-31027791 None:intergenic 20.0%
!! GTTAATAACTTGATATTAGT+TGG - chr1_2:31027781-31027800 Msa0066890:CDS 20.0%
!!! TGCTTTTTACCTAATTTTTT+AGG - chr1_2:31028654-31028673 Msa0066890:CDS 20.0%
!!! CATAAGAAATAAGAAAGTAT+TGG + chr1_2:31028811-31028830 None:intergenic 20.0%
! TTTATTTGCATTCAGAGAAT+TGG - chr1_2:31025756-31025775 Msa0066890:intron 25.0%
!!! TAAGTTTTGTGAGTTTGTTT+GGG + chr1_2:31026191-31026210 None:intergenic 25.0%
!!! ATAAGTTTTGTGAGTTTGTT+TGG + chr1_2:31026192-31026211 None:intergenic 25.0%
!! TTCAATGAATTTTGGATTGA+GGG + chr1_2:31026241-31026260 None:intergenic 25.0%
!! ATTCAATGAATTTTGGATTG+AGG + chr1_2:31026242-31026261 None:intergenic 25.0%
!!! GGATTTTATGTTATTTGATG+TGG - chr1_2:31026396-31026415 Msa0066890:intron 25.0%
!!! GTGTATTTTTTCAATTGTGT+AGG - chr1_2:31026421-31026440 Msa0066890:intron 25.0%
! TCTTGTCGATAACTAATATT+AGG - chr1_2:31026716-31026735 Msa0066890:CDS 25.0%
! AAACTAAAGATAGTTTCTGA+CGG + chr1_2:31026799-31026818 None:intergenic 25.0%
!! AGAAACTATCTTTAGTTTCT+AGG - chr1_2:31026801-31026820 Msa0066890:intron 25.0%
!! TCTTTTGTCTATGACTTAAA+GGG + chr1_2:31026904-31026923 None:intergenic 25.0%
!! TTCTTTTGTCTATGACTTAA+AGG + chr1_2:31026905-31026924 None:intergenic 25.0%
! TATCTAAAAGGATTGATACA+GGG + chr1_2:31027435-31027454 None:intergenic 25.0%
! TTATCTAAAAGGATTGATAC+AGG + chr1_2:31027436-31027455 None:intergenic 25.0%
!! ATATTTTCATAACCAGAATG+AGG - chr1_2:31027503-31027522 Msa0066890:intron 25.0%
! TTCATTTAAAAAGGACACAA+TGG + chr1_2:31027717-31027736 None:intergenic 25.0%
! AATCTATATCGTCATACATA+GGG - chr1_2:31027735-31027754 Msa0066890:CDS 25.0%
!!! GTTTCATTATTCTGAAATGA+AGG + chr1_2:31027863-31027882 None:intergenic 25.0%
! AATAATGAAACACAATTGTC+TGG - chr1_2:31027872-31027891 Msa0066890:intron 25.0%
! AGTAATATATCAAAATGGTC+TGG + chr1_2:31028263-31028282 None:intergenic 25.0%
!! TTTTGAATTAACTAACCAAC+AGG - chr1_2:31028319-31028338 Msa0066890:intron 25.0%
!!! CCATTGATTTATTCATTATC+CGG - chr1_2:31028463-31028482 Msa0066890:CDS 25.0%
! AAATTAGGTAAAAAGCAGTT+GGG + chr1_2:31028651-31028670 None:intergenic 25.0%
! AAAATTAGGTAAAAAGCAGT+TGG + chr1_2:31028652-31028671 None:intergenic 25.0%
! TCTTTATCTTACTAGGTATT+CGG + chr1_2:31028922-31028941 None:intergenic 25.0%
! TTATCGTTCTTTATCTTACT+AGG + chr1_2:31028929-31028948 None:intergenic 25.0%
AATGGAAGAAGATGAACAAT+TGG - chr1_2:31025815-31025834 Msa0066890:CDS 30.0%
! GTATATTCAAGCATCGTAAA+TGG + chr1_2:31026342-31026361 None:intergenic 30.0%
AAGTAGTGAATTTCTACCAT+TGG - chr1_2:31026451-31026470 Msa0066890:intron 30.0%
AGCTAGTATTACTGCATATT+GGG - chr1_2:31026484-31026503 Msa0066890:intron 30.0%
!! ATATTAGGCGTGTTGATTTA+AGG - chr1_2:31026731-31026750 Msa0066890:intron 30.0%
AACTAAAGATAGTTTCTGAC+GGG + chr1_2:31026798-31026817 None:intergenic 30.0%
! ATTTGAGGTGAATGATAGAT+CGG - chr1_2:31026957-31026976 Msa0066890:intron 30.0%
TTGTGCTATATATTTCACCT+TGG - chr1_2:31027467-31027486 Msa0066890:intron 30.0%
ATATCACAAATAAGCAACCA+AGG + chr1_2:31027487-31027506 None:intergenic 30.0%
ACACAATGGCATATATAGAA+GGG + chr1_2:31027703-31027722 None:intergenic 30.0%
GAATCTATATCGTCATACAT+AGG - chr1_2:31027734-31027753 Msa0066890:CDS 30.0%
!!! TTCTGAGGTTTTTTTGTTCT+TGG - chr1_2:31028090-31028109 Msa0066890:intron 30.0%
CCGGATAATGAATAAATCAA+TGG + chr1_2:31028466-31028485 None:intergenic 30.0%
CAATGGAGACCTAAAAAATT+AGG + chr1_2:31028666-31028685 None:intergenic 30.0%
TATGTGAATGAAGGTGAAAA+TGG - chr1_2:31028739-31028758 Msa0066890:CDS 30.0%
CTTTATCTTACTAGGTATTC+GGG + chr1_2:31028921-31028940 None:intergenic 30.0%
AAGAAGAAAACAGAACAGAG+AGG - chr1_2:31025428-31025447 Msa0066890:exon 35.0%
CACGTTGAAATCAGTGAATT+CGG + chr1_2:31025732-31025751 None:intergenic 35.0%
!! AATATACATAAGCGTTGAGC+TGG - chr1_2:31026355-31026374 Msa0066890:intron 35.0%
!!! TGGTGAGCTACTTTTTTTCT+TGG - chr1_2:31026375-31026394 Msa0066890:intron 35.0%
CAATATGCAGTAATACTAGC+TGG + chr1_2:31026485-31026504 None:intergenic 35.0%
CAGCTAGTATTACTGCATAT+TGG - chr1_2:31026483-31026502 Msa0066890:intron 35.0%
GCTAGTATTACTGCATATTG+GGG - chr1_2:31026485-31026504 Msa0066890:intron 35.0%
GGTTAACAAGAAGGTTAAAG+AGG - chr1_2:31026592-31026611 Msa0066890:intron 35.0%
AGAGAAGAAACAGATAGCAA+GGG + chr1_2:31026699-31026718 None:intergenic 35.0%
AAGAGAAGAAACAGATAGCA+AGG + chr1_2:31026700-31026719 None:intergenic 35.0%
! TTTGAGGTGAATGATAGATC+GGG - chr1_2:31026958-31026977 Msa0066890:intron 35.0%
TAGAAGTTTCCAGTTACGTA+TGG - chr1_2:31027009-31027028 Msa0066890:intron 35.0%
TGTTATCATGTGTGTTGCAT+GGG + chr1_2:31027092-31027111 None:intergenic 35.0%
ATGTTATCATGTGTGTTGCA+TGG + chr1_2:31027093-31027112 None:intergenic 35.0%
TTTGCACAACAACATTGTGT+TGG - chr1_2:31027236-31027255 Msa0066890:intron 35.0%
GTTTACAAAACCAGCTTGTA+AGG + chr1_2:31027391-31027410 None:intergenic 35.0%
ACGTGAAATTGTGACATCTT+TGG - chr1_2:31027545-31027564 Msa0066890:intron 35.0%
CGTGAAATTGTGACATCTTT+GGG - chr1_2:31027546-31027565 Msa0066890:intron 35.0%
GTCCAGCATACATAAAACTT+GGG - chr1_2:31027568-31027587 Msa0066890:intron 35.0%
GACACAATGGCATATATAGA+AGG + chr1_2:31027704-31027723 None:intergenic 35.0%
GACAGCAATTCTTGTAAGAA+GGG + chr1_2:31027991-31028010 None:intergenic 35.0%
AGACAGCAATTCTTGTAAGA+AGG + chr1_2:31027992-31028011 None:intergenic 35.0%
! AGAATTGCTGTCTGATGTTT+TGG - chr1_2:31027999-31028018 Msa0066890:intron 35.0%
!!! TGAGGTTTTTTTGTTCTTGG+TGG - chr1_2:31028093-31028112 Msa0066890:intron 35.0%
!!! GAGGTTTTTTTGTTCTTGGT+GGG - chr1_2:31028094-31028113 Msa0066890:intron 35.0%
!!! AGGTTTTTTTGTTCTTGGTG+GGG - chr1_2:31028095-31028114 Msa0066890:intron 35.0%
! GAAGGAACCTTCACATTTTA+TGG + chr1_2:31028134-31028153 None:intergenic 35.0%
! TCAGAATAGACATTTTGCCA+TGG + chr1_2:31028206-31028225 None:intergenic 35.0%
ACAAGAAAACAGATACCTGT+TGG + chr1_2:31028337-31028356 None:intergenic 35.0%
TTATTCATTATCCGGAACCT+TGG - chr1_2:31028471-31028490 Msa0066890:CDS 35.0%
!! ACAAGAATTTAACTTGCCTG+AGG + chr1_2:31028516-31028535 None:intergenic 35.0%
GAGTTAGACTATGTGAATGA+AGG - chr1_2:31028730-31028749 Msa0066890:CDS 35.0%
CAGGTCTTTCTTCATCATTT+CGG + chr1_2:31028776-31028795 None:intergenic 35.0%
TACTGACGTAAAACAGATAG+TGG + chr1_2:31028850-31028869 None:intergenic 35.0%
TTACACTAAGCAGAAGTTCT+TGG - chr1_2:31028871-31028890 Msa0066890:five_prime_UTR 35.0%
TGTGGAAGTTGTTGTATGTG+TGG + chr1_2:31025335-31025354 None:intergenic 40.0%
GTGGTTGTTGTAAAGAAGTG+TGG + chr1_2:31025353-31025372 None:intergenic 40.0%
! TTGTGATGATGCTGTATCCA+TGG + chr1_2:31025472-31025491 None:intergenic 40.0%
!! GAGAATTGGTGATGTTTCGA+AGG - chr1_2:31025770-31025789 Msa0066890:intron 40.0%
! CAATTGGCTTCTCTTATGAG+AGG - chr1_2:31025831-31025850 Msa0066890:CDS 40.0%
!!! TAACGATTCGCTTTTTGCTG+AGG - chr1_2:31025872-31025891 Msa0066890:CDS 40.0%
! ATTTTGGATTGAGGGTCTGT+TGG + chr1_2:31026233-31026252 None:intergenic 40.0%
GTGCAGTTATTATCTGTTGC+TGG - chr1_2:31026539-31026558 Msa0066890:intron 40.0%
CAGTTATTATCTGTTGCTGG+AGG - chr1_2:31026542-31026561 Msa0066890:intron 40.0%
! TTGCTGGAGGTTTTCTTTCT+CGG - chr1_2:31026555-31026574 Msa0066890:intron 40.0%
TAAGCTCATCCATACGTAAC+TGG + chr1_2:31027021-31027040 None:intergenic 40.0%
TGGAAATTCCACCCTAATTG+CGG - chr1_2:31027256-31027275 Msa0066890:intron 40.0%
TCTAGCACCTTCATTCTTCT+GGG - chr1_2:31027330-31027349 Msa0066890:intron 40.0%
ACTCAAACCCAGAAGAATGA+AGG + chr1_2:31027340-31027359 None:intergenic 40.0%
TTCATTCTTCTGGGTTTGAG+TGG - chr1_2:31027339-31027358 Msa0066890:intron 40.0%
TCATTCTTCTGGGTTTGAGT+GGG - chr1_2:31027340-31027359 Msa0066890:intron 40.0%
TGAGTGGGGAATATAAAGCT+TGG - chr1_2:31027355-31027374 Msa0066890:intron 40.0%
GAGTGGGGAATATAAAGCTT+GGG - chr1_2:31027356-31027375 Msa0066890:intron 40.0%
TTCACGTATTTCAATAGCCC+TGG + chr1_2:31027532-31027551 None:intergenic 40.0%
GGTCCAGCATACATAAAACT+TGG - chr1_2:31027567-31027586 Msa0066890:intron 40.0%
!! TGCCCAAGTTTTATGTATGC+TGG + chr1_2:31027573-31027592 None:intergenic 40.0%
AGCATGCAATGAAAGGGTAA+AGG + chr1_2:31027680-31027699 None:intergenic 40.0%
!!! GTCACTGCAGAGAGTTTTTT+TGG + chr1_2:31027927-31027946 None:intergenic 40.0%
!!! GTAAGCTCGTACTTTTTCTG+AGG - chr1_2:31028075-31028094 Msa0066890:intron 40.0%
!!! GGTTTTTTTGTTCTTGGTGG+GGG - chr1_2:31028096-31028115 Msa0066890:intron 40.0%
GGGGATTCCATAAAATGTGA+AGG - chr1_2:31028124-31028143 Msa0066890:intron 40.0%
TCCTTCATTTGCAGATGATG+TGG - chr1_2:31028148-31028167 Msa0066890:intron 40.0%
ATTTGCAGATGATGTGGCTA+TGG - chr1_2:31028154-31028173 Msa0066890:intron 40.0%
GCTCTAATTGAAGAGGAACT+TGG - chr1_2:31028176-31028195 Msa0066890:intron 40.0%
AAAATGGTCTGGAAAGCTAC+CGG + chr1_2:31028252-31028271 None:intergenic 40.0%
GAAACATATGCAGCATCTCT+CGG - chr1_2:31028357-31028376 Msa0066890:intron 40.0%
ATCTCTCGGACAGGTATATA+AGG - chr1_2:31028371-31028390 Msa0066890:intron 40.0%
TCTCTCGGACAGGTATATAA+GGG - chr1_2:31028372-31028391 Msa0066890:intron 40.0%
GTAACTGTCTCGAGAACAAA+AGG + chr1_2:31028444-31028463 None:intergenic 40.0%
! ATTTTCGAAGAGCCAAACCA+AGG + chr1_2:31028491-31028510 None:intergenic 40.0%
!!! TTTTTAGGTCTCCATTGACG+TGG - chr1_2:31028669-31028688 Msa0066890:CDS 40.0%
TATCTTACTAGGTATTCGGG+AGG + chr1_2:31028918-31028937 None:intergenic 40.0%
GAGTAAACAGCATTCCACCA+TGG - chr1_2:31025452-31025471 Msa0066890:CDS 45.0%
! TGATGATGCTGTATCCATGG+TGG + chr1_2:31025469-31025488 None:intergenic 45.0%
TCATCACAACTCATCTACCG+CGG - chr1_2:31025483-31025502 Msa0066890:CDS 45.0%
! GAAGTAAAGGATCGATTCCG+CGG + chr1_2:31025503-31025522 None:intergenic 45.0%
GAATGGGAAGAGCGAAGTAA+AGG + chr1_2:31025516-31025535 None:intergenic 45.0%
CCTTGAAGAAGAACCGTTGA+CGG + chr1_2:31025628-31025647 None:intergenic 45.0%
! TAAGAGAGTGAGAGCGCAAA+TGG - chr1_2:31025797-31025816 Msa0066890:intron 45.0%
TCTCTTATGAGAGGTCTTCG+TGG - chr1_2:31025840-31025859 Msa0066890:CDS 45.0%
! TGTTCAGCTACGTCTTGTTG+AGG - chr1_2:31025899-31025918 Msa0066890:intron 45.0%
CTAGCTGGATCATACACCAA+TGG + chr1_2:31026470-31026489 None:intergenic 45.0%
! TGCTGGAGGTTTTCTTTCTC+GGG - chr1_2:31026556-31026575 Msa0066890:intron 45.0%
!! TTTTCTTTCTCGGGTTGCGT+GGG - chr1_2:31026565-31026584 Msa0066890:intron 45.0%
GTGGGATGTGGTTAACAAGA+AGG - chr1_2:31026583-31026602 Msa0066890:intron 45.0%
GCAAGCTGCTTAGTCTATCT+TGG + chr1_2:31026631-31026650 None:intergenic 45.0%
CTAAGGGTAGACCGCAATTA+GGG + chr1_2:31027270-31027289 None:intergenic 45.0%
ACCCTTAGGCGCCTTAATAT+CGG - chr1_2:31027282-31027301 Msa0066890:intron 45.0%
!! CAACCCAAGTGCCGATATTA+AGG + chr1_2:31027296-31027315 None:intergenic 45.0%
!! CAGAAGAATGAAGGTGCTAG+AGG + chr1_2:31027331-31027350 None:intergenic 45.0%
CTCTAGCACCTTCATTCTTC+TGG - chr1_2:31027329-31027348 Msa0066890:intron 45.0%
CATTCTTCTGGGTTTGAGTG+GGG - chr1_2:31027341-31027360 Msa0066890:intron 45.0%
ATAACCAGAATGAGGTTGCC+AGG - chr1_2:31027511-31027530 Msa0066890:intron 45.0%
TAACCAGAATGAGGTTGCCA+GGG - chr1_2:31027512-31027531 Msa0066890:intron 45.0%
! GAAGGGAGCATGCAATGAAA+GGG + chr1_2:31027686-31027705 None:intergenic 45.0%
! AGAAGGGAGCATGCAATGAA+AGG + chr1_2:31027687-31027706 None:intergenic 45.0%
GCCACATCATCTGCAAATGA+AGG + chr1_2:31028152-31028171 None:intergenic 45.0%
!! GGCTATGGCTCTAATTGAAG+AGG - chr1_2:31028169-31028188 Msa0066890:intron 45.0%
! AATCCCCATTTTCCTTCAGG+CGG + chr1_2:31028398-31028417 None:intergenic 45.0%
! CCAAATCCCCATTTTCCTTC+AGG + chr1_2:31028401-31028420 None:intergenic 45.0%
CCTGAAGGAAAATGGGGATT+TGG - chr1_2:31028398-31028417 Msa0066890:intron 45.0%
CATTATCCGGAACCTTGGTT+TGG - chr1_2:31028476-31028495 Msa0066890:CDS 45.0%
GGCTCTTCGAAAATTTCCTC+AGG - chr1_2:31028497-31028516 Msa0066890:intron 45.0%
!!! GTGGGCTGCTAGATTTTTTG+AGG - chr1_2:31028708-31028727 Msa0066890:CDS 45.0%
TCTTCATCATTTCGGCGAAG+CGG + chr1_2:31028768-31028787 None:intergenic 45.0%
!! GAAAGTATTGGACTCACCTG+TGG + chr1_2:31028799-31028818 None:intergenic 45.0%
CACTAAGCAGAAGTTCTTGG+TGG - chr1_2:31028874-31028893 Msa0066890:five_prime_UTR 45.0%
CAGAAGTTCTTGGTGGAATC+TGG - chr1_2:31028881-31028900 Msa0066890:five_prime_UTR 45.0%
!! TATATGTTAATTTATTAATA+TGG - chr1_2:31028555-31028574 Msa0066890:intron 5.0%
AGAGAGAGAGAGGGTTTGGA+GGG + chr1_2:31025377-31025396 None:intergenic 50.0%
AGAGAGAGAGAGAGAGGGTT+TGG + chr1_2:31025381-31025400 None:intergenic 50.0%
GAGAGAGAGAGAGAGAGAGA+GGG + chr1_2:31025386-31025405 None:intergenic 50.0%
AGAGAGAGAGAGAGAGAGAG+AGG + chr1_2:31025385-31025404 None:intergenic 50.0%
GTTGTTGTGGCGGTTGGAAT+GGG + chr1_2:31025532-31025551 None:intergenic 50.0%
CAGCGGAGATACGGTTAGAA+CGG + chr1_2:31025572-31025591 None:intergenic 50.0%
! AACCGGAGCAGGTTTAGGAT+CGG + chr1_2:31025601-31025620 None:intergenic 50.0%
GTTGTAACCGGAGCAGGTTT+AGG + chr1_2:31025606-31025625 None:intergenic 50.0%
GAACCGTTGACGGTTGTAAC+CGG + chr1_2:31025618-31025637 None:intergenic 50.0%
CCGTCAACGGTTCTTCTTCA+AGG - chr1_2:31025625-31025644 Msa0066890:intron 50.0%
AGAGACACCGTTGACAGGTT+TGG + chr1_2:31025661-31025680 None:intergenic 50.0%
AAACCTGTCAACGGTGTCTC+TGG - chr1_2:31025660-31025679 Msa0066890:intron 50.0%
AACCTGTCAACGGTGTCTCT+GGG - chr1_2:31025661-31025680 Msa0066890:intron 50.0%
CTGCACAATGCGAGTTGCAA+CGG + chr1_2:31026525-31026544 None:intergenic 50.0%
!! GTTTTCTTTCTCGGGTTGCG+TGG - chr1_2:31026564-31026583 Msa0066890:intron 50.0%
CTTGACGTGGTGGTCATTGT+CGG - chr1_2:31026658-31026677 Msa0066890:CDS 50.0%
! ATAGATCGGGTTGCGTACAC+AGG - chr1_2:31026971-31026990 Msa0066890:intron 50.0%
CCTAAGGGTAGACCGCAATT+AGG + chr1_2:31027271-31027290 None:intergenic 50.0%
CCTAATTGCGGTCTACCCTT+AGG - chr1_2:31027268-31027287 Msa0066890:intron 50.0%
! GCCGATATTAAGGCGCCTAA+GGG + chr1_2:31027286-31027305 None:intergenic 50.0%
! TGCCGATATTAAGGCGCCTA+AGG + chr1_2:31027287-31027306 None:intergenic 50.0%
GCGCCTTAATATCGGCACTT+GGG - chr1_2:31027290-31027309 Msa0066890:intron 50.0%
GGTGCTAGAGGATGCAATGA+AGG + chr1_2:31027319-31027338 None:intergenic 50.0%
GCAGTTCTCACCTTACAAGC+TGG - chr1_2:31027378-31027397 Msa0066890:intron 50.0%
GCTGCAGGTGACAGTATATC+AGG + chr1_2:31027612-31027631 None:intergenic 50.0%
TGCAACTCTGTCATTGCTGC+AGG + chr1_2:31027627-31027646 None:intergenic 50.0%
! TTTTGTTCTTGGTGGGGGTG+TGG - chr1_2:31028101-31028120 Msa0066890:intron 50.0%
! TTTGTTCTTGGTGGGGGTGT+GGG - chr1_2:31028102-31028121 Msa0066890:intron 50.0%
AAGAGGAACTTGGTCAGCCA+TGG - chr1_2:31028186-31028205 Msa0066890:intron 50.0%
ATATGCAGCATCTCTCGGAC+AGG - chr1_2:31028362-31028381 Msa0066890:intron 50.0%
GAAGAGCCAAACCAAGGTTC+CGG + chr1_2:31028485-31028504 None:intergenic 50.0%
TAGGTCTCCATTGACGTGGT+TGG - chr1_2:31028673-31028692 Msa0066890:CDS 50.0%
AGGTCTCCATTGACGTGGTT+GGG - chr1_2:31028674-31028693 Msa0066890:CDS 50.0%
AACCAACCCAACCACGTCAA+TGG + chr1_2:31028683-31028702 None:intergenic 50.0%
GATGAAGAAAGACCTGCCAC+AGG - chr1_2:31028780-31028799 Msa0066890:exon 50.0%
GTGTGGTGCGAAGTGTGACA+AGG + chr1_2:31025318-31025337 None:intergenic 55.0%
GAGAGAGAGAGAGGGTTTGG+AGG + chr1_2:31025378-31025397 None:intergenic 55.0%
GGTTGTTGTGGCGGTTGGAA+TGG + chr1_2:31025533-31025552 None:intergenic 55.0%
CGGAGATACGGTTAGAACGG+CGG + chr1_2:31025569-31025588 None:intergenic 55.0%
! TTTAGGATCGGTGGCGACAG+CGG + chr1_2:31025589-31025608 None:intergenic 55.0%
CACCGATCCTAAACCTGCTC+CGG - chr1_2:31025596-31025615 Msa0066890:intron 55.0%
TTGACGGTTGTAACCGGAGC+AGG + chr1_2:31025612-31025631 None:intergenic 55.0%
GCTCCGGTTACAACCGTCAA+CGG - chr1_2:31025612-31025631 Msa0066890:intron 55.0%
ACACCGTTGACAGGTTTGGC+AGG + chr1_2:31025657-31025676 None:intergenic 55.0%
ACCTGTCAACGGTGTCTCTG+GGG - chr1_2:31025662-31025681 Msa0066890:intron 55.0%
GCTTGCGTGCATTCTTGACG+TGG - chr1_2:31026645-31026664 Msa0066890:CDS 55.0%
TGCGTGCATTCTTGACGTGG+TGG - chr1_2:31026648-31026667 Msa0066890:CDS 55.0%
AGGGTAGACCGCAATTAGGG+TGG + chr1_2:31027267-31027286 None:intergenic 55.0%
GGCGCCTTAATATCGGCACT+TGG - chr1_2:31027289-31027308 Msa0066890:intron 55.0%
TAGCCCTGGCAACCTCATTC+TGG + chr1_2:31027518-31027537 None:intergenic 55.0%
! TTGTTCTTGGTGGGGGTGTG+GGG - chr1_2:31028103-31028122 Msa0066890:intron 55.0%
ATGGTCTGGAAAGCTACCGG+CGG + chr1_2:31028249-31028268 None:intergenic 55.0%
GGTATATAAGGGCCGCCTGA+AGG - chr1_2:31028383-31028402 Msa0066890:intron 55.0%
AAGGGCCGCCTGAAGGAAAA+TGG - chr1_2:31028390-31028409 Msa0066890:intron 55.0%
AGGGCCGCCTGAAGGAAAAT+GGG - chr1_2:31028391-31028410 Msa0066890:intron 55.0%
CTCCATTGACGTGGTTGGGT+TGG - chr1_2:31028678-31028697 Msa0066890:CDS 55.0%
!! TGGTTGGGTTGGTTGACGAG+TGG - chr1_2:31028689-31028708 Msa0066890:CDS 55.0%
!! GGTTGGGTTGGTTGACGAGT+GGG - chr1_2:31028690-31028709 Msa0066890:CDS 55.0%
GTATTGGACTCACCTGTGGC+AGG + chr1_2:31028795-31028814 None:intergenic 55.0%
GAGAGAGGGTTTGGAGGGAG+TGG + chr1_2:31025372-31025391 None:intergenic 60.0%
AGGGAGGTTGTTGTGGCGGT+TGG + chr1_2:31025538-31025557 None:intergenic 60.0%
GGAGAGGGAGGTTGTTGTGG+CGG + chr1_2:31025542-31025561 None:intergenic 60.0%
GACGGAGAGGGAGGTTGTTG+TGG + chr1_2:31025545-31025564 None:intergenic 60.0%
TACGGTTAGAACGGCGGCGA+CGG + chr1_2:31025563-31025582 None:intergenic 60.0%
! CGGAGCAGGTTTAGGATCGG+TGG + chr1_2:31025598-31025617 None:intergenic 60.0%
CCGTTGACAGGTTTGGCAGG+CGG + chr1_2:31025654-31025673 None:intergenic 60.0%
CCGCCTGCCAAACCTGTCAA+CGG - chr1_2:31025651-31025670 Msa0066890:intron 60.0%
ACCCCAGAGACACCGTTGAC+AGG + chr1_2:31025666-31025685 None:intergenic 60.0%
ATGCGAGTTGCAACGGAGCG+AGG + chr1_2:31026518-31026537 None:intergenic 60.0%
! TTCTCGGGTTGCGTGGGATG+TGG - chr1_2:31026571-31026590 Msa0066890:intron 60.0%
! TGTTCTTGGTGGGGGTGTGG+GGG - chr1_2:31028104-31028123 Msa0066890:intron 60.0%
TCAACCTCTCCCATTGCCGC+CGG - chr1_2:31028230-31028249 Msa0066890:intron 60.0%
GGAAAGCTACCGGCGGCAAT+GGG + chr1_2:31028242-31028261 None:intergenic 60.0%
TGGAAAGCTACCGGCGGCAA+TGG + chr1_2:31028243-31028262 None:intergenic 60.0%
GGGCCGCCTGAAGGAAAATG+GGG - chr1_2:31028392-31028411 Msa0066890:intron 60.0%
TAGAACGGCGGCGACGGAGA+GGG + chr1_2:31025557-31025576 None:intergenic 65.0%
TTAGAACGGCGGCGACGGAG+AGG + chr1_2:31025558-31025577 None:intergenic 65.0%
CGGTGGCGACAGCGGAGATA+CGG + chr1_2:31025581-31025600 None:intergenic 65.0%
! GTTCTTGGTGGGGGTGTGGG+GGG - chr1_2:31028105-31028124 Msa0066890:intron 65.0%
GCTACCGGCGGCAATGGGAG+AGG + chr1_2:31028237-31028256 None:intergenic 70.0%
AACGGCGGCGACGGAGAGGG+AGG + chr1_2:31025554-31025573 None:intergenic 75.0%
Chromosome Type Strat End Strand Name
chr1_2 gene 31025306 31028962 31025306 ID=Msa0066890;Name=Msa0066890
chr1_2 mRNA 31025306 31028962 31025306 ID=Msa0066890-mRNA-1;Parent=Msa0066890;Name=Msa0066890-mRNA-1;_AED=0.04;_eAED=0.04;_QI=165|0.66|0.57|1|1|1|7|131|321
chr1_2 exon 31025306 31025592 31025306 ID=Msa0066890-mRNA-1:exon:10339;Parent=Msa0066890-mRNA-1
chr1_2 exon 31025810 31025898 31025810 ID=Msa0066890-mRNA-1:exon:10338;Parent=Msa0066890-mRNA-1
chr1_2 exon 31026017 31026122 31026017 ID=Msa0066890-mRNA-1:exon:10337;Parent=Msa0066890-mRNA-1
chr1_2 exon 31026606 31026749 31026606 ID=Msa0066890-mRNA-1:exon:10336;Parent=Msa0066890-mRNA-1
chr1_2 exon 31027655 31027821 31027655 ID=Msa0066890-mRNA-1:exon:10335;Parent=Msa0066890-mRNA-1
chr1_2 exon 31028407 31028497 31028407 ID=Msa0066890-mRNA-1:exon:10334;Parent=Msa0066890-mRNA-1
chr1_2 exon 31028585 31028962 31028585 ID=Msa0066890-mRNA-1:exon:10333;Parent=Msa0066890-mRNA-1
chr1_2 five_prime_UTR 31028798 31028962 31028798 ID=Msa0066890-mRNA-1:five_prime_utr;Parent=Msa0066890-mRNA-1
chr1_2 CDS 31028585 31028797 31028585 ID=Msa0066890-mRNA-1:cds;Parent=Msa0066890-mRNA-1
chr1_2 CDS 31028407 31028497 31028407 ID=Msa0066890-mRNA-1:cds;Parent=Msa0066890-mRNA-1
chr1_2 CDS 31027655 31027821 31027655 ID=Msa0066890-mRNA-1:cds;Parent=Msa0066890-mRNA-1
chr1_2 CDS 31026606 31026749 31026606 ID=Msa0066890-mRNA-1:cds;Parent=Msa0066890-mRNA-1
chr1_2 CDS 31026017 31026122 31026017 ID=Msa0066890-mRNA-1:cds;Parent=Msa0066890-mRNA-1
chr1_2 CDS 31025810 31025898 31025810 ID=Msa0066890-mRNA-1:cds;Parent=Msa0066890-mRNA-1
chr1_2 CDS 31025437 31025592 31025437 ID=Msa0066890-mRNA-1:cds;Parent=Msa0066890-mRNA-1
chr1_2 three_prime_UTR 31025306 31025436 31025306 ID=Msa0066890-mRNA-1:three_prime_utr;Parent=Msa0066890-mRNA-1
Gene Sequence

>Msa0066890

ATGGATACAGCATCATCACAACTCATCTACCGCGGAATCGATCCTTTACTTCGCTCTTCCCATTCCAACCGCCACAACAACCTCCCTCTCCGTCGCCGCCGTTCTAACCGTATCTCCGCTGTCGCCACCGATCCTAAACCTGCTCCGGTTACAACCGTCAACGGTTCTTCTTCAAGGTCTCCGCCTGCCAAACCTGTCAACGGTGTCTCTGGGAGAATTGGTGATGTTTCGAAGGAGATTAAGAGAGTGAGAGCGCAAATGGAAGAAGATGAACAATTGGCTTCTCTTATGAGAGGTCTTCGTGATGAAAGTAGTGAATTTCTACCATTGGTGTATGATCCAGCTAGTATTACTGCATATTGGGGAAAACGTCCTCGCTCCGTTGCAACTCGCATTGTGCAGTTATTATCTGTTGCTGGAGGTTTTCTTTCTCGGGTTGCGTGGGATGTGGTTAACAAGAAGGTTAAAGAGAATGAGGTTGCCAGGGCTATTGAAATACGTGAAATTGTGACATCTTTGGGTCCAGCATACATAAAACTTGGGCAAGCATTGAGCATACGACCTGATATACTGTCACCTGCAGCAATGACAGAGTTGCAGAAGCTCTGTGATAAAGTTCCTTCATTTGCAGATGATGTGGCTATGGCTCTAATTGAAGAGGAACTTGGTCAGCCATGGCAAAATGTCTATTCTGAATTATCAACCTCTCCCATTGCCGCCGCATCTCTCGGACAGGTATATAAGGGCCGCCTGAAGGAAAATGGGGATTTGGTTGCTGTTAAAGTGCAAAGACCTTTTGTTCTCGAGACAGTCTCCATTGACGTGGTTGGGTTGGTTGACGAGTGGGCTGCTAGATTTTTTGAGGAGTTAGACTATGTGAATGAAGGTGAAAATGGAGACCGCTTCGCCGAAATGATGAAGAAAGACCTGCCACAGGTGAGTCCAATACTTTCTTATTTCTTATGA

Protein sequence

>Msa0066890

MDTASSQLIYRGIDPLLRSSHSNRHNNLPLRRRRSNRISAVATDPKPAPVTTVNGSSSRSPPAKPVNGVSGRIGDVSKEIKRVRAQMEEDEQLASLMRGLRDESSEFLPLVYDPASITAYWGKRPRSVATRIVQLLSVAGGFLSRVAWDVVNKKVKENEVARAIEIREIVTSLGPAYIKLGQALSIRPDILSPAAMTELQKLCDKVPSFADDVAMALIEEELGQPWQNVYSELSTSPIAAASLGQVYKGRLKENGDLVAVKVQRPFVLETVSIDVVGLVDEWAARFFEELDYVNEGENGDRFAEMMKKDLPQVSPILSYFL*