Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0875090 | XP_013451155.1 | 97.192 | 463 | 13 | 0 | 1 | 463 | 1 | 463 | 0.0 | 900 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0875090 | sp|F4KBM7|AVT6B_ARATH | 62.838 | 444 | 162 | 2 | 20 | 461 | 8 | 450 | 0.0 | 580 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0875090 | A0A072UHC3 | 97.192 | 463 | 13 | 0 | 1 | 463 | 1 | 463 | 0.0 | 900 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0030030 | Msa0875090 | 0.812491 | 4.127263e-51 | -8.615850e-47 |
| Msa0050730 | Msa0875090 | 0.805745 | 1.150917e-49 | -8.615850e-47 |
| Msa0050760 | Msa0875090 | 0.813083 | 3.063063e-51 | -8.615850e-47 |
| Msa0105340 | Msa0875090 | 0.815287 | 9.985764e-52 | -8.615850e-47 |
| Msa0726610 | Msa0875090 | 0.810007 | 1.427754e-50 | -8.615850e-47 |
| Msa0731710 | Msa0875090 | 0.821394 | 4.133024e-53 | -8.615850e-47 |
| Msa0169960 | Msa0875090 | 0.807740 | 4.360058e-50 | -8.615850e-47 |
| Msa0419620 | Msa0875090 | -0.807923 | 3.987690e-50 | -8.615850e-47 |
| Msa0252180 | Msa0875090 | 0.809355 | 1.971430e-50 | -8.615850e-47 |
| Msa0313990 | Msa0875090 | 0.803739 | 3.018668e-49 | -8.615850e-47 |
| Msa0563140 | Msa0875090 | 0.808695 | 2.729455e-50 | -8.615850e-47 |
| Msa0590660 | Msa0875090 | 0.805595 | 1.237628e-49 | -8.615850e-47 |
| Msa0875090 | Msa0900200 | 0.822480 | 2.315866e-53 | -8.615850e-47 |
| Msa0875090 | Msa0908170 | 0.823950 | 1.050841e-53 | -8.615850e-47 |
| Msa0875090 | Msa0910980 | -0.818982 | 1.475024e-52 | -8.615850e-47 |
| Msa0875090 | Msa0927670 | 0.819908 | 9.069482e-53 | -8.615850e-47 |
| Msa0875090 | Msa0965520 | 0.809165 | 2.165697e-50 | -8.615850e-47 |
| Msa0875090 | Msa1015060 | 0.802981 | 4.334963e-49 | -8.615850e-47 |
| Msa0875090 | Msa1056640 | 0.807799 | 4.236106e-50 | -8.615850e-47 |
| Msa0875090 | Msa1080790 | 0.814182 | 1.754728e-51 | -8.615850e-47 |
| Msa0875090 | Msa1092820 | 0.818148 | 2.279723e-52 | -8.615850e-47 |
| Msa0875090 | Msa1118930 | 0.819679 | 1.023531e-52 | -8.615850e-47 |
| Msa0875090 | Msa1157020 | 0.804370 | 2.231861e-49 | -8.615850e-47 |
| Msa0875090 | Msa1335720 | 0.806903 | 6.559811e-50 | -8.615850e-47 |
| Msa0875090 | Msa1386520 | 0.840547 | 8.140950e-58 | -8.615850e-47 |
| Msa0875090 | Msa1440600 | 0.816521 | 5.298063e-52 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0875090 | MtrunA17_Chr6g0455941 | 97.192 | 463 | 13 | 0 | 1 | 463 | 1 | 463 | 0.0 | 900 |
| Msa0875090 | MtrunA17_Chr6g0455981 | 86.313 | 453 | 62 | 0 | 9 | 461 | 4 | 456 | 0.0 | 773 |
| Msa0875090 | MtrunA17_Chr6g0455911 | 85.011 | 447 | 67 | 0 | 16 | 462 | 9 | 455 | 0.0 | 755 |
| Msa0875090 | MtrunA17_Chr6g0455951 | 81.169 | 462 | 84 | 2 | 1 | 462 | 1 | 459 | 0.0 | 736 |
| Msa0875090 | MtrunA17_Chr7g0220531 | 72.903 | 465 | 123 | 2 | 1 | 463 | 1 | 464 | 0.0 | 692 |
| Msa0875090 | MtrunA17_Chr8g0366021 | 56.798 | 456 | 186 | 2 | 18 | 463 | 8 | 462 | 0.0 | 526 |
| Msa0875090 | MtrunA17_Chr6g0459871 | 82.562 | 281 | 45 | 1 | 182 | 462 | 39 | 315 | 1.21e-153 | 439 |
| Msa0875090 | MtrunA17_Chr5g0437951 | 44.651 | 430 | 232 | 3 | 29 | 453 | 11 | 439 | 3.50e-127 | 376 |
| Msa0875090 | MtrunA17_Chr5g0437961 | 43.692 | 428 | 232 | 3 | 27 | 453 | 5 | 424 | 3.51e-122 | 363 |
| Msa0875090 | MtrunA17_Chr3g0114351 | 43.269 | 416 | 233 | 2 | 48 | 462 | 25 | 438 | 3.13e-119 | 355 |
| Msa0875090 | MtrunA17_Chr8g0366001 | 61.423 | 267 | 102 | 1 | 197 | 463 | 4 | 269 | 3.28e-117 | 344 |
| Msa0875090 | MtrunA17_Chr2g0333321 | 43.095 | 420 | 231 | 4 | 45 | 461 | 73 | 487 | 2.35e-113 | 342 |
| Msa0875090 | MtrunA17_Chr8g0365971 | 50.265 | 189 | 89 | 1 | 14 | 202 | 23 | 206 | 2.19e-54 | 181 |
| Msa0875090 | MtrunA17_Chr8g0365991 | 46.259 | 147 | 69 | 1 | 18 | 154 | 8 | 154 | 4.35e-34 | 126 |
| Msa0875090 | MtrunA17_Chr3g0114341 | 42.529 | 87 | 50 | 0 | 48 | 134 | 23 | 109 | 1.89e-18 | 81.3 |
| Msa0875090 | MtrunA17_Chr7g0256281 | 23.404 | 423 | 275 | 13 | 46 | 460 | 141 | 522 | 8.16e-11 | 63.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0875090 | AT5G38820.1 | 62.838 | 444 | 162 | 2 | 20 | 461 | 8 | 450 | 0.0 | 580 |
| Msa0875090 | AT5G38820.3 | 62.838 | 444 | 162 | 2 | 20 | 461 | 8 | 450 | 0.0 | 580 |
| Msa0875090 | AT5G38820.2 | 62.838 | 444 | 162 | 2 | 20 | 461 | 13 | 455 | 0.0 | 580 |
| Msa0875090 | AT3G30390.1 | 63.387 | 437 | 159 | 1 | 25 | 461 | 21 | 456 | 0.0 | 572 |
| Msa0875090 | AT3G30390.3 | 63.387 | 437 | 159 | 1 | 25 | 461 | 21 | 456 | 0.0 | 572 |
| Msa0875090 | AT3G30390.2 | 63.387 | 437 | 159 | 1 | 25 | 461 | 21 | 456 | 0.0 | 572 |
| Msa0875090 | AT3G56200.1 | 42.657 | 429 | 240 | 3 | 30 | 457 | 9 | 432 | 4.25e-114 | 343 |
| Msa0875090 | AT2G40420.1 | 43.836 | 438 | 242 | 4 | 27 | 463 | 6 | 440 | 2.00e-111 | 336 |
| Msa0875090 | AT1G80510.1 | 39.627 | 482 | 244 | 7 | 14 | 462 | 22 | 489 | 4.98e-102 | 313 |
| Msa0875090 | AT2G41190.1 | 23.326 | 463 | 299 | 12 | 24 | 462 | 106 | 536 | 3.59e-14 | 75.1 |
Find 129 sgRNAs with CRISPR-Local
Find 605 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTCTTTGGGTTCCTTCTATT+TGG | 0.167128 | 6_1:+11137826 | Msa0875090:CDS |
| ATTGTAGGTGATGTGATTTC+TGG | 0.204897 | 6_1:+11135693 | Msa0875090:intron |
| TTCTTCCTATGGAAGTCTTA+TGG | 0.207163 | 6_1:+11135432 | Msa0875090:CDS |
| AATTTGTCCACCACAGTTAT+TGG | 0.221850 | 6_1:+11135274 | Msa0875090:CDS |
| GTTCCTTTCATCTGAAAGTA+TGG | 0.225789 | 6_1:-11140142 | None:intergenic |
| CGCAAGTCTGACGCCGTATA+TGG | 0.253818 | 6_1:+11144650 | Msa0875090:three_prime_UTR |
| TCCAAAATCAGTATCAAAAT+TGG | 0.255928 | 6_1:-11137875 | None:intergenic |
| CAATAATGCTGTTAGGATTA+TGG | 0.274763 | 6_1:-11135359 | None:intergenic |
| ACTTGCTGTGTTTGGACCTT+TGG | 0.275914 | 6_1:+11135812 | Msa0875090:CDS |
| CAAATTTCATACCCAGCATT+TGG | 0.286363 | 6_1:+11138100 | Msa0875090:CDS |
| TCTTCCTATGGAAGTCTTAT+GGG | 0.289755 | 6_1:+11135433 | Msa0875090:CDS |
| ATTGTTTACATGATCATTAT+TGG | 0.304311 | 6_1:+11135526 | Msa0875090:CDS |
| TACGTACTGACAAGCTTCTT+TGG | 0.306305 | 6_1:+11137811 | Msa0875090:CDS |
| CACTGTACAAATATACAATT+TGG | 0.314959 | 6_1:-11144740 | None:intergenic |
| TCCACCACAGTTATTGGTGC+TGG | 0.320758 | 6_1:+11135280 | Msa0875090:CDS |
| TTTACAACACTTGCTGTGTT+TGG | 0.329895 | 6_1:+11135804 | Msa0875090:CDS |
| TTTAATGGAGCTTCATTTCC+TGG | 0.343179 | 6_1:+11135241 | Msa0875090:CDS |
| TTTGGTGTCCATTGGTGGAC+TGG | 0.358328 | 6_1:+11135762 | Msa0875090:CDS |
| TTCCAGTTCTCTGGAGCAAC+AGG | 0.363246 | 6_1:+11138129 | Msa0875090:CDS |
| GTGATTTCTGGAACGACTTC+AGG | 0.369597 | 6_1:+11135705 | Msa0875090:CDS |
| GTTACAAAGGATAAGAAGTC+TGG | 0.370788 | 6_1:-11144858 | None:intergenic |
| GAATCTACATCAGTAATGAT+AGG | 0.372014 | 6_1:-11137234 | None:intergenic |
| TTCACATCTGCATTATCAAT+TGG | 0.372056 | 6_1:+11137126 | Msa0875090:CDS |
| TCAATTATCAAGATTATTAG+TGG | 0.372252 | 6_1:+11137186 | Msa0875090:CDS |
| AGTTATTGGTGCTGGGATCA+TGG | 0.376122 | 6_1:+11135288 | Msa0875090:CDS |
| AGTCTTATGGGAGATACCTT+TGG | 0.377085 | 6_1:+11135445 | Msa0875090:CDS |
| TCTCTGTCAATAATGCTGTT+AGG | 0.389276 | 6_1:-11135366 | None:intergenic |
| CACCTGTTGCTCCAGAGAAC+TGG | 0.391056 | 6_1:-11138131 | None:intergenic |
| TCTTATCCTTTGTAACTGTA+AGG | 0.394621 | 6_1:+11144865 | Msa0875090:three_prime_UTR |
| GTCTTATGGGAGATACCTTT+GGG | 0.394756 | 6_1:+11135446 | Msa0875090:CDS |
| ACGTACTGACAAGCTTCTTT+GGG | 0.398754 | 6_1:+11137812 | Msa0875090:CDS |
| TCAATTACTATTGCCCTTGT+TGG | 0.399975 | 6_1:+11138060 | Msa0875090:CDS |
| TTGGTCAGCTTAAAGCGAAT+TGG | 0.402046 | 6_1:+11135831 | Msa0875090:CDS |
| TTGGTGTCCATTGGTGGACT+GGG | 0.404638 | 6_1:+11135763 | Msa0875090:CDS |
| AAATTTCATACCCAGCATTT+GGG | 0.404719 | 6_1:+11138101 | Msa0875090:CDS |
| TTCCAGCTGCAATCACTTTG+AGG | 0.404901 | 6_1:+11138175 | Msa0875090:CDS |
| GCATTAGCTACAAGAGCATC+AGG | 0.419568 | 6_1:-11135133 | None:intergenic |
| AACAAGGTTGAACATGTTGC+AGG | 0.420350 | 6_1:-11140273 | None:intergenic |
| TTATATACCACATCCATATA+CGG | 0.421730 | 6_1:-11144663 | None:intergenic |
| CTTGTTGGCACTATCTTCCT+CGG | 0.424244 | 6_1:+11138075 | Msa0875090:CDS |
| TGAAAGCTGATAATGACAAT+TGG | 0.425002 | 6_1:+11135100 | Msa0875090:exon |
| CACCATCCTGGTATCCTTGA+AGG | 0.427798 | 6_1:+11135735 | Msa0875090:CDS |
| TACTCTGTCAAATACTGTAT+TGG | 0.430778 | 6_1:-11135016 | None:intergenic |
| TCTGCATTATTGCTTGCTAA+AGG | 0.431091 | 6_1:+11144908 | Msa0875090:three_prime_UTR |
| TTGTTGGCACTATCTTCCTC+GGG | 0.434972 | 6_1:+11138076 | Msa0875090:CDS |
| GCAGGGAATCTTTCTTCCTA+TGG | 0.437556 | 6_1:+11135421 | Msa0875090:CDS |
| TGATAGAATGGTTAAGTTCA+AGG | 0.437592 | 6_1:+11144933 | Msa0875090:three_prime_UTR |
| GGAGATACCTTTGGGAAATA+CGG | 0.437934 | 6_1:+11135454 | Msa0875090:CDS |
| AGTAATGATAGGGAAGAGTC+TGG | 0.449295 | 6_1:-11137223 | None:intergenic |
| GAGTTCCTTCACCAAATAGA+AGG | 0.452164 | 6_1:-11137837 | None:intergenic |
| GTTATTGGTGCTGGGATCAT+GGG | 0.455926 | 6_1:+11135289 | Msa0875090:CDS |
| CCATCTGTTTCTTGACACTT+AGG | 0.461672 | 6_1:-11135205 | None:intergenic |
| GGTATCCTTGAAGGATGGTT+TGG | 0.466861 | 6_1:+11135744 | Msa0875090:CDS |
| AGGATAAGAAGTCTGGGAAA+TGG | 0.474486 | 6_1:-11144851 | None:intergenic |
| CTGGAAAATAACCCAAATGC+TGG | 0.474691 | 6_1:-11138112 | None:intergenic |
| GGGTTCCTTCTATTTGGTGA+AGG | 0.475952 | 6_1:+11137832 | Msa0875090:CDS |
| ACTGTAAGGGAGGAATTTGT+TGG | 0.476949 | 6_1:+11144879 | Msa0875090:three_prime_UTR |
| AAGGATGGTTTGGTGTCCAT+TGG | 0.478302 | 6_1:+11135754 | Msa0875090:CDS |
| AAGATTATTAGTGGAAGCAT+TGG | 0.480946 | 6_1:+11137195 | Msa0875090:CDS |
| GCTACAAGAGCATCAGGTGC+AGG | 0.481251 | 6_1:-11135127 | None:intergenic |
| CACCTCAAAGTGATTGCAGC+TGG | 0.481278 | 6_1:-11138177 | None:intergenic |
| CCACCACAGTTATTGGTGCT+GGG | 0.481742 | 6_1:+11135281 | Msa0875090:CDS |
| AGGCAATTGAGTTCATGATC+AGG | 0.483659 | 6_1:+11135389 | Msa0875090:CDS |
| GATGGTTTGGTGTCCATTGG+TGG | 0.485337 | 6_1:+11135757 | Msa0875090:CDS |
| TTAATGGAGCTTCATTTCCT+GGG | 0.487705 | 6_1:+11135242 | Msa0875090:CDS |
| TTGCTAAAGGACTGATAGAA+TGG | 0.488670 | 6_1:+11144921 | Msa0875090:three_prime_UTR |
| AGATTATTAGTGGAAGCATT+GGG | 0.491513 | 6_1:+11137196 | Msa0875090:CDS |
| TTTCCATACTTTCAGATGAA+AGG | 0.492825 | 6_1:+11140139 | Msa0875090:three_prime_UTR |
| TCATAACATTGATAATGAAC+TGG | 0.495103 | 6_1:+11137729 | Msa0875090:CDS |
| TTCTGCTTTGATCAACAAGA+AGG | 0.498521 | 6_1:+11140068 | Msa0875090:CDS |
| CTCAATGCATAGAAAACTAC+AGG | 0.499017 | 6_1:-11137967 | None:intergenic |
| AACCTTGTTTATAATAGAGT+AGG | 0.500251 | 6_1:+11144614 | Msa0875090:intron |
| GAGGATTCCTCACGGATGCG+TGG | 0.508056 | 6_1:+11137751 | Msa0875090:CDS |
| CTTATCCTTTGTAACTGTAA+GGG | 0.509386 | 6_1:+11144866 | Msa0875090:three_prime_UTR |
| GCATTGAGGGTCAACATAGA+TGG | 0.513114 | 6_1:+11137982 | Msa0875090:CDS |
| AGGATTCCTCACGGATGCGT+GGG | 0.514657 | 6_1:+11137752 | Msa0875090:CDS |
| GGACACCAAACCATCCTTCA+AGG | 0.515087 | 6_1:-11135749 | None:intergenic |
| TATTCTTCAAAACTGTATGA+AGG | 0.524256 | 6_1:+11140250 | Msa0875090:three_prime_UTR |
| ACCTTGTTTATAATAGAGTA+GGG | 0.524863 | 6_1:+11144615 | Msa0875090:intron |
| ACACTGAAGAGCATAGAGTA+AGG | 0.526789 | 6_1:-11137789 | None:intergenic |
| AAACCGCCATCACTATCATA+AGG | 0.536193 | 6_1:-11140014 | None:intergenic |
| CGAGGAAGATAGTGCCAACA+AGG | 0.546384 | 6_1:-11138074 | None:intergenic |
| AGGATTATGGCAAGAAGACC+AGG | 0.549978 | 6_1:-11135346 | None:intergenic |
| AATCTACATCAGTAATGATA+GGG | 0.551706 | 6_1:-11137233 | None:intergenic |
| GAAAGGAACATAATTTCTGA+TGG | 0.556260 | 6_1:+11140156 | Msa0875090:three_prime_UTR |
| GACAAATTGAAAACAGCCCC+AGG | 0.556593 | 6_1:-11135259 | None:intergenic |
| CTGAAGTTATCAACAATCAA+AGG | 0.557272 | 6_1:-11138030 | None:intergenic |
| GATATATGATGTTGTAAATG+TGG | 0.558460 | 6_1:+11144807 | Msa0875090:three_prime_UTR |
| AATCAAAGGCCTTCTTGATG+AGG | 0.564180 | 6_1:-11138016 | None:intergenic |
| TCAGGTGGAATTCACCATCC+TGG | 0.566685 | 6_1:+11135723 | Msa0875090:CDS |
| TCATTAAGAGCAGAACCAAA+AGG | 0.570302 | 6_1:-11137901 | None:intergenic |
| ATGTGCGCCCAGTCCACCAA+TGG | 0.574258 | 6_1:-11135770 | None:intergenic |
| ATCTCCCATAAGACTTCCAT+AGG | 0.579026 | 6_1:-11135437 | None:intergenic |
| TTACAAAGGATAAGAAGTCT+GGG | 0.579596 | 6_1:-11144857 | None:intergenic |
| ATTTCTGGAACGACTTCAGG+TGG | 0.580424 | 6_1:+11135708 | Msa0875090:CDS |
| AACCATCCTTCAAGGATACC+AGG | 0.580545 | 6_1:-11135741 | None:intergenic |
| TTCCTCCCTTACAGTTACAA+AGG | 0.583567 | 6_1:-11144871 | None:intergenic |
| ATCCTGGTATCCTTGAAGGA+TGG | 0.589559 | 6_1:+11135739 | Msa0875090:CDS |
| GTCTGTCCTTATGATAGTGA+TGG | 0.589607 | 6_1:+11140008 | Msa0875090:CDS |
| CACTGAAGAGCATAGAGTAA+GGG | 0.591533 | 6_1:-11137788 | None:intergenic |
| TGGAAAATAACCCAAATGCT+GGG | 0.594278 | 6_1:-11138111 | None:intergenic |
| TCTGACGCCGTATATGGATG+TGG | 0.596264 | 6_1:+11144656 | Msa0875090:three_prime_UTR |
| TCTTGACACTTAGGTAACAA+AGG | 0.596273 | 6_1:-11135196 | None:intergenic |
| TAATGGAGCTTCATTTCCTG+GGG | 0.598538 | 6_1:+11135243 | Msa0875090:CDS |
| TTTCTCTCGCTCAGTCATGT+CGG | 0.598966 | 6_1:-11144704 | None:intergenic |
| TGGGAAATACGGAAAAGCAC+TGG | 0.598996 | 6_1:+11135465 | Msa0875090:CDS |
| AACAGCATTATTGACAGAGA+AGG | 0.601333 | 6_1:+11135369 | Msa0875090:CDS |
| TAACATTGATAATGAACTGG+AGG | 0.604897 | 6_1:+11137732 | Msa0875090:CDS |
| ATCCTTTGTAACTGTAAGGG+AGG | 0.608194 | 6_1:+11144869 | Msa0875090:three_prime_UTR |
| ATATAAGCTGTCATCAGCAC+AGG | 0.613100 | 6_1:-11137282 | None:intergenic |
| CCCAGCACCAATAACTGTGG+TGG | 0.618929 | 6_1:-11135281 | None:intergenic |
| GCTTATATCTGTCACTACAA+TGG | 0.622057 | 6_1:+11137297 | Msa0875090:CDS |
| ATTCGCTTTAAGCTGACCAA+AGG | 0.630059 | 6_1:-11135828 | None:intergenic |
| CCTAAGTGTCAAGAAACAGA+TGG | 0.641175 | 6_1:+11135205 | Msa0875090:CDS |
| ATCCTTCAAGGATACCAGGA+TGG | 0.644563 | 6_1:-11135737 | None:intergenic |
| TTGAAGAATATATGCACACA+TGG | 0.647438 | 6_1:-11140237 | None:intergenic |
| ATAAGAAGTCTGGGAAATGG+AGG | 0.648941 | 6_1:-11144848 | None:intergenic |
| GTAATGATAGGGAAGAGTCT+GGG | 0.650937 | 6_1:-11137222 | None:intergenic |
| GGATTCCTCACGGATGCGTG+GGG | 0.652593 | 6_1:+11137753 | Msa0875090:CDS |
| ACTCTACTCTGTTATAAACA+AGG | 0.655190 | 6_1:-11140289 | None:intergenic |
| TGTGTTATAATCACTAACGT+TGG | 0.671440 | 6_1:+11135496 | Msa0875090:CDS |
| TGTTGGCACTATCTTCCTCG+GGG | 0.677077 | 6_1:+11138077 | Msa0875090:CDS |
| ATGAACTGGAGGATTCCTCA+CGG | 0.679968 | 6_1:+11137743 | Msa0875090:CDS |
| CACAACCCCACGCATCCGTG+AGG | 0.689700 | 6_1:-11137758 | None:intergenic |
| TGTCCTTATGATAGTGATGG+CGG | 0.689703 | 6_1:+11140011 | Msa0875090:CDS |
| ATATGATGTTGTAAATGTGG+AGG | 0.697391 | 6_1:+11144810 | Msa0875090:three_prime_UTR |
| GAGGAAGATAGTGCCAACAA+GGG | 0.710864 | 6_1:-11138073 | None:intergenic |
| GATCCCAGCACCAATAACTG+TGG | 0.717106 | 6_1:-11135284 | None:intergenic |
| TGGGTATGAAATTTGCCCCG+AGG | 0.735253 | 6_1:-11138092 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATAAATCGAATTTTAATTAA+GGG | - | chr6_1:11136268-11136287 | None:intergenic | 10.0% |
| !!! | AATAAATCGAATTTTAATTA+AGG | - | chr6_1:11136267-11136286 | None:intergenic | 10.0% |
| !!! | AATTAAAATTCGATTTATTT+TGG | - | chr6_1:11136011-11136030 | None:intergenic | 10.0% |
| !!! | AATAAATCGAATTTTAATTA+AGG | + | chr6_1:11136267-11136286 | Msa0875090:intron | 10.0% |
| !!! | ATAAATCGAATTTTAATTAA+GGG | + | chr6_1:11136268-11136287 | Msa0875090:intron | 10.0% |
| !! | TATTTGTAAATTGAAAAAAA+TGG | + | chr6_1:11136415-11136434 | Msa0875090:intron | 10.0% |
| !!! | TCAAGAATAATATTTATTTT+GGG | - | chr6_1:11138767-11138786 | None:intergenic | 10.0% |
| !!! | TTCAAGAATAATATTTATTT+TGG | - | chr6_1:11138768-11138787 | None:intergenic | 10.0% |
| !! | AAATAAATATTATTCTTGAA+TGG | + | chr6_1:11138768-11138787 | Msa0875090:intron | 10.0% |
| !!! | TAGCTAAATATATTTTATTT+GGG | - | chr6_1:11138820-11138839 | None:intergenic | 10.0% |
| !!! | CTAATAAATTATAACTTTTT+AGG | - | chr6_1:11139401-11139420 | None:intergenic | 10.0% |
| !! | TATCTTTAAATTTAATATGT+TGG | + | chr6_1:11139436-11139455 | Msa0875090:intron | 10.0% |
| !! | TTATATGAAAGATTATATAA+AGG | - | chr6_1:11141440-11141459 | None:intergenic | 10.0% |
| !!! | CTAAATTTTATCATTTATTA+CGG | + | chr6_1:11141672-11141691 | Msa0875090:intron | 10.0% |
| !!! | TTATTTTGCTATTGATATTT+TGG | + | chr6_1:11134979-11134998 | Msa0875090:five_prime_UTR | 15.0% |
| !! | TCAATTTACAAATAATGAAA+TGG | - | chr6_1:11136409-11136428 | None:intergenic | 15.0% |
| !! | ACCAACAAATTAAAAAAAAA+TGG | + | chr6_1:11136609-11136628 | Msa0875090:intron | 15.0% |
| !!! | TCCATTTTTTTTTAATTTGT+TGG | - | chr6_1:11136613-11136632 | None:intergenic | 15.0% |
| !!! | AGATTATTTTAGTTAATTTC+TGG | + | chr6_1:11137605-11137624 | Msa0875090:intron | 15.0% |
| !! | GTAAAAAATAAATTGAAACA+TGG | + | chr6_1:11138283-11138302 | Msa0875090:intron | 15.0% |
| !!! | TAGATGAAATATTAGTTTAT+AGG | - | chr6_1:11138434-11138453 | None:intergenic | 15.0% |
| !! | TTGTATATTTATATCGATAT+TGG | - | chr6_1:11138622-11138641 | None:intergenic | 15.0% |
| !! | ATAAAAATTTGATTGATATC+AGG | + | chr6_1:11138703-11138722 | Msa0875090:intron | 15.0% |
| !! | TAAAAATTTGATTGATATCA+GGG | + | chr6_1:11138704-11138723 | Msa0875090:intron | 15.0% |
| !!! | CAAGAATAATATTTATTTTG+GGG | - | chr6_1:11138766-11138785 | None:intergenic | 15.0% |
| !!! | AGCTAAATATATTTTATTTG+GGG | - | chr6_1:11138819-11138838 | None:intergenic | 15.0% |
| !!! | GTAGCTAAATATATTTTATT+TGG | - | chr6_1:11138821-11138840 | None:intergenic | 15.0% |
| !!! | TTCAACAATTAAATTTGTTT+GGG | - | chr6_1:11138844-11138863 | None:intergenic | 15.0% |
| !!! | TTTCAACAATTAAATTTGTT+TGG | - | chr6_1:11138845-11138864 | None:intergenic | 15.0% |
| !!! | TTGAATTTTTGTTAACATAT+TGG | + | chr6_1:11139188-11139207 | Msa0875090:intron | 15.0% |
| !!! | GTTAAGTTTAAGATTAAATT+TGG | + | chr6_1:11139210-11139229 | Msa0875090:intron | 15.0% |
| !! | AAAATAAATGAAAAACACAA+TGG | + | chr6_1:11140389-11140408 | Msa0875090:intron | 15.0% |
| !!! | ACAAAAGAAATATGATATTT+TGG | - | chr6_1:11140447-11140466 | None:intergenic | 15.0% |
| !! | AAATAAATTGAATTGAAGTT+TGG | + | chr6_1:11140625-11140644 | Msa0875090:intron | 15.0% |
| !!! | TTATATATGTTTTCATTGAT+TGG | + | chr6_1:11140734-11140753 | Msa0875090:intron | 15.0% |
| !!! | ATATGTTGATTGTTTAATTA+AGG | - | chr6_1:11141081-11141100 | None:intergenic | 15.0% |
| !! | TATATAAAGGAAATATTATG+TGG | - | chr6_1:11141427-11141446 | None:intergenic | 15.0% |
| !!! | TTAATAATTCTAAAACACAA+GGG | - | chr6_1:11141499-11141518 | None:intergenic | 15.0% |
| !!! | TTTAATAATTCTAAAACACA+AGG | - | chr6_1:11141500-11141519 | None:intergenic | 15.0% |
| !! | GAAAAATATATTCAAAACTT+TGG | - | chr6_1:11141959-11141978 | None:intergenic | 15.0% |
| !!! | AATTGATTTTCAGATTATTT+TGG | + | chr6_1:11143491-11143510 | Msa0875090:intron | 15.0% |
| !! | TTGCTTCATAATTTATTATA+TGG | + | chr6_1:11143754-11143773 | Msa0875090:intron | 15.0% |
| !! | ATTGTTTACATGATCATTAT+TGG | + | chr6_1:11135526-11135545 | Msa0875090:CDS | 20.0% |
| !! | TAATCAACTAAAACAAAAAC+TGG | - | chr6_1:11135613-11135632 | None:intergenic | 20.0% |
| !!! | AGTTTTAATTCAAAAACGTT+AGG | - | chr6_1:11136201-11136220 | None:intergenic | 20.0% |
| !!! | CGTTTTTGAATTAAAACTAA+CGG | + | chr6_1:11136203-11136222 | Msa0875090:intron | 20.0% |
| !! | ATTGTTTGGTCATAAAAAAT+AGG | - | chr6_1:11136537-11136556 | None:intergenic | 20.0% |
| !! | TTGTCAAACTTATAATTGTT+TGG | - | chr6_1:11136551-11136570 | None:intergenic | 20.0% |
| !! | TCAATTATCAAGATTATTAG+TGG | + | chr6_1:11137186-11137205 | Msa0875090:CDS | 20.0% |
| !! | GTGTAAAAACATTAAAACAA+GGG | - | chr6_1:11137360-11137379 | None:intergenic | 20.0% |
| !! | TGTGTAAAAACATTAAAACA+AGG | - | chr6_1:11137361-11137380 | None:intergenic | 20.0% |
| !!! | ATCTGAATTTCTATTGTTTT+AGG | - | chr6_1:11137589-11137608 | None:intergenic | 20.0% |
| !!! | ACTAAAATTTGTTTACTTCA+TGG | + | chr6_1:11137656-11137675 | Msa0875090:intron | 20.0% |
| !! | TTATATAATCGATATTCACA+CGG | + | chr6_1:11138306-11138325 | Msa0875090:intron | 20.0% |
| !! | TAAATCCAATGATAAAAAAG+TGG | + | chr6_1:11138480-11138499 | Msa0875090:intron | 20.0% |
| !! | AAAAATTTGATTGATATCAG+GGG | + | chr6_1:11138705-11138724 | Msa0875090:intron | 20.0% |
| !!! | TCAACAATTAAATTTGTTTG+GGG | - | chr6_1:11138843-11138862 | None:intergenic | 20.0% |
| !! | AAAAGCTATTTAGAAAAGTT+GGG | - | chr6_1:11139118-11139137 | None:intergenic | 20.0% |
| !! | TAAAAGCTATTTAGAAAAGT+TGG | - | chr6_1:11139119-11139138 | None:intergenic | 20.0% |
| !! | TTAAATTTGGATTTAATCTC+TGG | + | chr6_1:11139223-11139242 | Msa0875090:intron | 20.0% |
| !!! | ATTTTTAAGTTAAGTTCCTA+AGG | + | chr6_1:11139256-11139275 | Msa0875090:intron | 20.0% |
| !! | TTAACATTAAACAAAACCTT+AGG | - | chr6_1:11139275-11139294 | None:intergenic | 20.0% |
| !! | ATTTCGATAACAACAAATTA+GGG | - | chr6_1:11139299-11139318 | None:intergenic | 20.0% |
| !! | AATTTCGATAACAACAAATT+AGG | - | chr6_1:11139300-11139319 | None:intergenic | 20.0% |
| !! | TAAAAATTTGCGACAAAAAT+TGG | + | chr6_1:11139350-11139369 | Msa0875090:intron | 20.0% |
| !! | TGATTGATATACTTCATTAT+AGG | + | chr6_1:11139541-11139560 | Msa0875090:intron | 20.0% |
| !! | TAGTATTTACCAAATAAAGT+AGG | - | chr6_1:11139632-11139651 | None:intergenic | 20.0% |
| !! | TTTATTTGGTAAATACTAAC+TGG | + | chr6_1:11139634-11139653 | Msa0875090:intron | 20.0% |
| !!! | AGTAATTTTGACATAAAGTA+TGG | + | chr6_1:11140856-11140875 | Msa0875090:intron | 20.0% |
| !! | TTAATTCACTTTGAATAGTT+TGG | + | chr6_1:11141121-11141140 | Msa0875090:intron | 20.0% |
| !! | TATAATGAAGTATAAACAAC+CGG | + | chr6_1:11141455-11141474 | Msa0875090:intron | 20.0% |
| !! | AAAATTTAGTTAAAAGACAG+CGG | - | chr6_1:11141661-11141680 | None:intergenic | 20.0% |
| !!! | CAATAATTTGTAGTTATCAT+TGG | - | chr6_1:11141814-11141833 | None:intergenic | 20.0% |
| !! | TTGCTTCTAATATAATATCT+TGG | + | chr6_1:11141871-11141890 | Msa0875090:intron | 20.0% |
| !! | ATATAATATCTTGGTTTCAT+TGG | + | chr6_1:11141880-11141899 | Msa0875090:intron | 20.0% |
| !!! | ATATTTTTCAAGCTGAAAAA+CGG | + | chr6_1:11141970-11141989 | Msa0875090:intron | 20.0% |
| !! | AATTTATCAACCACAATTAT+TGG | + | chr6_1:11142230-11142249 | Msa0875090:intron | 20.0% |
| !! | TATCATTAGAGAAGAATTTA+AGG | + | chr6_1:11142536-11142555 | Msa0875090:intron | 20.0% |
| !!! | TTTGTTTTTGTTCATATTGT+AGG | + | chr6_1:11142573-11142592 | Msa0875090:intron | 20.0% |
| !! | TTAATTTACAAACGATGAAA+TGG | - | chr6_1:11142862-11142881 | None:intergenic | 20.0% |
| !! | CGTTTGTAAATTAAGAAAAA+TGG | + | chr6_1:11142868-11142887 | Msa0875090:intron | 20.0% |
| !! | ATTTGGTATACATGATTATT+TGG | + | chr6_1:11142940-11142959 | Msa0875090:intron | 20.0% |
| !! | TAGTAAAAACATTAAGAGAA+AGG | - | chr6_1:11143321-11143340 | None:intergenic | 20.0% |
| !! | GATTTGTATTAAGAAGATTA+AGG | + | chr6_1:11143377-11143396 | Msa0875090:intron | 20.0% |
| !!! | GATTAATAGTATGCATTTTT+TGG | + | chr6_1:11143594-11143613 | Msa0875090:intron | 20.0% |
| !! | AAATTTCATACCTAACATTT+GGG | + | chr6_1:11144179-11144198 | Msa0875090:intron | 20.0% |
| !! | GGTGATTTTCATGAATTTAA+TGG | + | chr6_1:11135226-11135245 | Msa0875090:CDS | 25.0% |
| !!! | TTTGGTTTTGTTTGTATTGT+AGG | + | chr6_1:11135678-11135697 | Msa0875090:intron | 25.0% |
| !! | TTCTTGCATTACAACAATTT+TGG | + | chr6_1:11135865-11135884 | Msa0875090:intron | 25.0% |
| ! | GATACTACCTAAATAGTTAA+GGG | - | chr6_1:11136299-11136318 | None:intergenic | 25.0% |
| !! | CGTTTTTGAATTAAAACCAA+CGG | - | chr6_1:11136074-11136093 | None:intergenic | 25.0% |
| !!! | GGTTTTAATTCAAAAACGTT+AGG | + | chr6_1:11136076-11136095 | Msa0875090:intron | 25.0% |
| !!! | TTTTCTTCTGGAATTTTTCT+AGG | + | chr6_1:11136108-11136127 | Msa0875090:intron | 25.0% |
| ! | ATGATATGAAGATGAAAAAG+AGG | + | chr6_1:11136157-11136176 | Msa0875090:intron | 25.0% |
| ! | GATACTACCTAAATAGTTAA+GGG | + | chr6_1:11136299-11136318 | Msa0875090:intron | 25.0% |
| !! | TCATGACTAAATTGCATTTT+TGG | - | chr6_1:11136326-11136345 | None:intergenic | 25.0% |
| ! | AGAAAAATAGAGAAGTCATA+TGG | + | chr6_1:11136489-11136508 | Msa0875090:intron | 25.0% |
| ! | TTTGGTCATAAAAAATAGGA+TGG | - | chr6_1:11136533-11136552 | None:intergenic | 25.0% |
| ! | TTCTAACAACTGATATAGTT+AGG | + | chr6_1:11136765-11136784 | Msa0875090:intron | 25.0% |
| !!! | AGTTTTGTTGCTAAATTGTT+TGG | + | chr6_1:11136859-11136878 | Msa0875090:intron | 25.0% |
| !! | AAGTAGCAATTTGTTTCATT+TGG | - | chr6_1:11136892-11136911 | None:intergenic | 25.0% |
| ! | TCTAATGTTCTAATTCACTT+GGG | - | chr6_1:11136935-11136954 | None:intergenic | 25.0% |
| ! | ATCTAATGTTCTAATTCACT+TGG | - | chr6_1:11136936-11136955 | None:intergenic | 25.0% |
| !!! | CTTTTTATGTTTTTGTACCT+TGG | + | chr6_1:11136979-11136998 | Msa0875090:intron | 25.0% |
| ! | AATCTACATCAGTAATGATA+GGG | - | chr6_1:11137236-11137255 | None:intergenic | 25.0% |
| !!! | GTGAAATTCTAAGTTTGTTA+TGG | + | chr6_1:11137391-11137410 | Msa0875090:intron | 25.0% |
| !! | CTTTTCAAATTAGTTGGAAA+TGG | - | chr6_1:11137475-11137494 | None:intergenic | 25.0% |
| !! | TGGTTTCTTTTCAAATTAGT+TGG | - | chr6_1:11137481-11137500 | None:intergenic | 25.0% |
| ! | TTATAAAAAGTTGACATGCA+TGG | - | chr6_1:11137501-11137520 | None:intergenic | 25.0% |
| !!! | TCATAACATTGATAATGAAC+TGG | + | chr6_1:11137729-11137748 | Msa0875090:CDS | 25.0% |
| ! | TCCAAAATCAGTATCAAAAT+TGG | - | chr6_1:11137878-11137897 | None:intergenic | 25.0% |
| !!! | GAATTCATTTAGTTCTGTAA+TGG | + | chr6_1:11138212-11138231 | Msa0875090:intron | 25.0% |
| !!! | TAGTTCTGTAATGGATTTTT+TGG | + | chr6_1:11138221-11138240 | Msa0875090:intron | 25.0% |
| ! | AGTGATTCATTCTAATGAAT+CGG | + | chr6_1:11138556-11138575 | Msa0875090:intron | 25.0% |
| ! | TAATGAAGTATATCAATCAG+CGG | - | chr6_1:11139540-11139559 | None:intergenic | 25.0% |
| !!! | ATTTTGTTCTTTAACTTGCA+TGG | + | chr6_1:11139564-11139583 | Msa0875090:intron | 25.0% |
| !! | TCTGCAGTTTTTCTATATAA+TGG | - | chr6_1:11139678-11139697 | None:intergenic | 25.0% |
| ! | TATAGAAAAACTGCAGAAAA+TGG | + | chr6_1:11139681-11139700 | Msa0875090:intron | 25.0% |
| ! | TACTTAAGAGAAGAGAAAAA+GGG | - | chr6_1:11139865-11139884 | None:intergenic | 25.0% |
| !!! | TAAACATTTTGTTTTGCTAC+AGG | + | chr6_1:11139947-11139966 | Msa0875090:intron | 25.0% |
| !!! | AAACATTTTGTTTTGCTACA+GGG | + | chr6_1:11139948-11139967 | Msa0875090:intron | 25.0% |
| ! | TATTCTTCAAAACTGTATGA+AGG | + | chr6_1:11140250-11140269 | Msa0875090:three_prime_UTR | 25.0% |
| !! | GCAATTTTATTCATTATTGC+TGG | + | chr6_1:11140533-11140552 | Msa0875090:intron | 25.0% |
| !!! | AGTAATTTTGACATAAAGTG+TGG | + | chr6_1:11140800-11140819 | Msa0875090:intron | 25.0% |
| ! | GCAAAAATGTTGAAATTGAT+AGG | + | chr6_1:11140924-11140943 | Msa0875090:intron | 25.0% |
| !! | TTTTCTAATTTTTCATCACG+TGG | + | chr6_1:11141243-11141262 | Msa0875090:intron | 25.0% |
| ! | TGAGCATATTTCAATTGATA+TGG | - | chr6_1:11141399-11141418 | None:intergenic | 25.0% |
| ! | ATCAATTGAAATATGCTCAA+AGG | + | chr6_1:11141400-11141419 | Msa0875090:intron | 25.0% |
| ! | AATTTGTAGTTATCATTGGT+CGG | - | chr6_1:11141810-11141829 | None:intergenic | 25.0% |
| !!! | TATTTTTCAAGCTGAAAAAC+GGG | + | chr6_1:11141971-11141990 | Msa0875090:intron | 25.0% |
| ! | TGAAAAGTGAAAATGACTAT+TGG | + | chr6_1:11142062-11142081 | Msa0875090:intron | 25.0% |
| ! | GTTAAGTTTGATGAATTTAG+TGG | + | chr6_1:11142182-11142201 | Msa0875090:intron | 25.0% |
| !! | AGTCAATTGATTTCATAATC+AGG | + | chr6_1:11142345-11142364 | Msa0875090:intron | 25.0% |
| !! | ATTTCATAATCAGGTTTTCT+AGG | + | chr6_1:11142354-11142373 | Msa0875090:intron | 25.0% |
| !! | TTTCATAATCAGGTTTTCTA+GGG | + | chr6_1:11142355-11142374 | Msa0875090:intron | 25.0% |
| !!! | ATATGTGTTTTAAGTACCAT+CGG | + | chr6_1:11142449-11142468 | Msa0875090:intron | 25.0% |
| ! | ATCATGTACATGATCATTAT+TGG | + | chr6_1:11142479-11142498 | Msa0875090:intron | 25.0% |
| ! | AAAGTCTAGACTTAAGAATA+TGG | - | chr6_1:11142510-11142529 | None:intergenic | 25.0% |
| !!! | AGTTTTGTTGTGAAGTTATT+TGG | + | chr6_1:11143014-11143033 | Msa0875090:intron | 25.0% |
| ! | TCAGTTATCAAGATTATAAG+TGG | + | chr6_1:11143167-11143186 | Msa0875090:intron | 25.0% |
| ! | AGACTTGTATAATTGTAAGT+TGG | + | chr6_1:11143349-11143368 | Msa0875090:intron | 25.0% |
| !!! | GTATAATTGTAAGTTGGTTA+TGG | + | chr6_1:11143355-11143374 | Msa0875090:intron | 25.0% |
| ! | TCATAAAAAATTGACACAGA+TGG | - | chr6_1:11143465-11143484 | None:intergenic | 25.0% |
| !!! | TAGTATGCATTTTTTGGTTT+AGG | + | chr6_1:11143600-11143619 | Msa0875090:intron | 25.0% |
| ! | TAAATTATGAAGCAAACAAG+TGG | - | chr6_1:11143749-11143768 | None:intergenic | 25.0% |
| ! | CAAATTTCATACCTAACATT+TGG | + | chr6_1:11144178-11144197 | Msa0875090:intron | 25.0% |
| ! | TTTCCAAACTTTCAGATTAA+AGG | + | chr6_1:11144531-11144550 | Msa0875090:intron | 25.0% |
| ! | TTGAAGAATATTTGTACACA+CGG | - | chr6_1:11144567-11144586 | None:intergenic | 25.0% |
| !! | AACCTTGTTTATAATAGAGT+AGG | + | chr6_1:11144614-11144633 | Msa0875090:intron | 25.0% |
| !! | ACCTTGTTTATAATAGAGTA+GGG | + | chr6_1:11144615-11144634 | Msa0875090:intron | 25.0% |
| ! | TTATATACCACATCCATATA+CGG | - | chr6_1:11144666-11144685 | None:intergenic | 25.0% |
| ! | CACTGTACAAATATACAATT+TGG | - | chr6_1:11144743-11144762 | None:intergenic | 25.0% |
| ! | GATATATGATGTTGTAAATG+TGG | + | chr6_1:11144807-11144826 | Msa0875090:three_prime_UTR | 25.0% |
| TACTCTGTCAAATACTGTAT+TGG | - | chr6_1:11135019-11135038 | None:intergenic | 30.0% | |
| ! | TGAAAGCTGATAATGACAAT+TGG | + | chr6_1:11135100-11135119 | Msa0875090:exon | 30.0% |
| TTGTAGCTAATGCAAAAACA+AGG | + | chr6_1:11135143-11135162 | Msa0875090:CDS | 30.0% | |
| TGCAAAAACAAGGAAGAAAA+AGG | + | chr6_1:11135153-11135172 | Msa0875090:CDS | 30.0% | |
| CAATAATGCTGTTAGGATTA+TGG | - | chr6_1:11135362-11135381 | None:intergenic | 30.0% | |
| TGTGTTATAATCACTAACGT+TGG | + | chr6_1:11135496-11135515 | Msa0875090:CDS | 30.0% | |
| ATTCACTTTAAGCTGATCAA+GGG | - | chr6_1:11135892-11135911 | None:intergenic | 30.0% | |
| AATTCACTTTAAGCTGATCA+AGG | - | chr6_1:11135893-11135912 | None:intergenic | 30.0% | |
| TTGATCAGCTTAAAGTGAAT+TGG | + | chr6_1:11135892-11135911 | Msa0875090:intron | 30.0% | |
| CGATACTACCTAAATAGTTA+AGG | - | chr6_1:11136298-11136317 | None:intergenic | 30.0% | |
| ! | AGGTTTTCTTCATTTTCTTC+TGG | + | chr6_1:11136096-11136115 | Msa0875090:intron | 30.0% |
| !!! | TCTAGGATTTTTGTTGTTGA+AGG | + | chr6_1:11136125-11136144 | Msa0875090:intron | 30.0% |
| !!! | TTTTTGTTGTTGAAGGTTGA+TGG | + | chr6_1:11136132-11136151 | Msa0875090:intron | 30.0% |
| CGATACTACCTAAATAGTTA+AGG | + | chr6_1:11136298-11136317 | Msa0875090:intron | 30.0% | |
| ! | TTTTGGTCCCTTAACTATTT+AGG | - | chr6_1:11136309-11136328 | None:intergenic | 30.0% |
| CATGATAGATTAGATGACAA+TGG | + | chr6_1:11136341-11136360 | Msa0875090:intron | 30.0% | |
| ATAGATTAGATGACAATGGT+AGG | + | chr6_1:11136345-11136364 | Msa0875090:intron | 30.0% | |
| ! | TATTTTTCTTCACCCAGTTT+GGG | - | chr6_1:11136478-11136497 | None:intergenic | 30.0% |
| GCATAAAGGATTCAATTTGT+TGG | - | chr6_1:11136707-11136726 | None:intergenic | 30.0% | |
| CTGAACATAACATTGCATAA+AGG | - | chr6_1:11136721-11136740 | None:intergenic | 30.0% | |
| CTTTATGCAATGTTATGTTC+AGG | + | chr6_1:11136719-11136738 | Msa0875090:intron | 30.0% | |
| ! | TTATGTTCAGGTTATGTGAT+AGG | + | chr6_1:11136731-11136750 | Msa0875090:intron | 30.0% |
| ACTTGGGCAAAAATATGAAA+GGG | - | chr6_1:11136919-11136938 | None:intergenic | 30.0% | |
| CCATAAAACATGTAAAACCA+AGG | - | chr6_1:11136999-11137018 | None:intergenic | 30.0% | |
| !!! | CCTTGGTTTTACATGTTTTA+TGG | + | chr6_1:11136996-11137015 | Msa0875090:intron | 30.0% |
| ! | TTACATGTTTTATGGTACAC+CGG | + | chr6_1:11137004-11137023 | Msa0875090:intron | 30.0% |
| TTCACATCTGCATTATCAAT+TGG | + | chr6_1:11137126-11137145 | Msa0875090:CDS | 30.0% | |
| ! | AAGATTATTAGTGGAAGCAT+TGG | + | chr6_1:11137195-11137214 | Msa0875090:CDS | 30.0% |
| !! | AGATTATTAGTGGAAGCATT+GGG | + | chr6_1:11137196-11137215 | Msa0875090:CDS | 30.0% |
| GAATCTACATCAGTAATGAT+AGG | - | chr6_1:11137237-11137256 | None:intergenic | 30.0% | |
| AAACATTAAAACAAGGGAAC+TGG | - | chr6_1:11137354-11137373 | None:intergenic | 30.0% | |
| !! | TAACATTGATAATGAACTGG+AGG | + | chr6_1:11137732-11137751 | Msa0875090:CDS | 30.0% |
| !!! | GCCAATTTTGATACTGATTT+TGG | + | chr6_1:11137874-11137893 | Msa0875090:CDS | 30.0% |
| !!! | ACTGATTTTGGAATTCCTTT+TGG | + | chr6_1:11137886-11137905 | Msa0875090:CDS | 30.0% |
| ! | TGTAGTTTTCTATGCATTGA+GGG | + | chr6_1:11137969-11137988 | Msa0875090:CDS | 30.0% |
| ! | TGATATTTTCCTCATCAAGA+AGG | + | chr6_1:11138007-11138026 | Msa0875090:CDS | 30.0% |
| CTGAAGTTATCAACAATCAA+AGG | - | chr6_1:11138033-11138052 | None:intergenic | 30.0% | |
| AAATTTCATACCCAGCATTT+GGG | + | chr6_1:11138101-11138120 | Msa0875090:CDS | 30.0% | |
| !!! | TTCTGTAATGGATTTTTTGG+TGG | + | chr6_1:11138224-11138243 | Msa0875090:intron | 30.0% |
| !! | TGTTTGCTTTTGATACTTAG+TGG | + | chr6_1:11138253-11138272 | Msa0875090:intron | 30.0% |
| !!! | AACAGCCACTTTTTTATCAT+TGG | - | chr6_1:11138488-11138507 | None:intergenic | 30.0% |
| GTGATTCATTCTAATGAATC+GGG | + | chr6_1:11138557-11138576 | Msa0875090:intron | 30.0% | |
| CAAGAAAGATTTGTATCGAA+TGG | + | chr6_1:11138639-11138658 | Msa0875090:intron | 30.0% | |
| ! | TTTTTCATGGGTGCTAATTT+AGG | - | chr6_1:11139600-11139619 | None:intergenic | 30.0% |
| AAATTAGCACCCATGAAAAA+CGG | + | chr6_1:11139600-11139619 | Msa0875090:intron | 30.0% | |
| CATGGTATTAATCAATGTTG+CGG | - | chr6_1:11139739-11139758 | None:intergenic | 30.0% | |
| CTACTTAAGAGAAGAGAAAA+AGG | - | chr6_1:11139866-11139885 | None:intergenic | 30.0% | |
| TTTCCATACTTTCAGATGAA+AGG | + | chr6_1:11140139-11140158 | Msa0875090:three_prime_UTR | 30.0% | |
| GAAAGGAACATAATTTCTGA+TGG | + | chr6_1:11140156-11140175 | Msa0875090:three_prime_UTR | 30.0% | |
| TTGAAGAATATATGCACACA+TGG | - | chr6_1:11140240-11140259 | None:intergenic | 30.0% | |
| ACTCTACTCTGTTATAAACA+AGG | - | chr6_1:11140292-11140311 | None:intergenic | 30.0% | |
| AATGGTATATTATCTGAGTC+CGG | + | chr6_1:11140407-11140426 | Msa0875090:intron | 30.0% | |
| TGCAAAAGAATCCTATATTC+TGG | + | chr6_1:11140471-11140490 | Msa0875090:intron | 30.0% | |
| GCAAAAGAATCCTATATTCT+GGG | + | chr6_1:11140472-11140491 | Msa0875090:intron | 30.0% | |
| TGTCTCTCTTACATTTAAGA+GGG | - | chr6_1:11140506-11140525 | None:intergenic | 30.0% | |
| ATGTCTCTCTTACATTTAAG+AGG | - | chr6_1:11140507-11140526 | None:intergenic | 30.0% | |
| AATGTAAGAGAGACATTTGT+TGG | + | chr6_1:11140511-11140530 | Msa0875090:intron | 30.0% | |
| ! | TATTCATTATTGCTGGCTAA+AGG | + | chr6_1:11140540-11140559 | Msa0875090:intron | 30.0% |
| GCATCAAAAGTTCAATTACA+GGG | - | chr6_1:11140695-11140714 | None:intergenic | 30.0% | |
| TGCATCAAAAGTTCAATTAC+AGG | - | chr6_1:11140696-11140715 | None:intergenic | 30.0% | |
| ! | TTTTGATGCACTTCATAGTA+TGG | + | chr6_1:11140706-11140725 | Msa0875090:intron | 30.0% |
| ! | TCCTTATCTGTATGAGTTTT+CGG | + | chr6_1:11140982-11141001 | Msa0875090:intron | 30.0% |
| TTGGCTTCTAATACAGTATT+TGG | + | chr6_1:11141899-11141918 | Msa0875090:intron | 30.0% | |
| !!! | CGGGTTTATTTTGTTTTTGA+TGG | + | chr6_1:11141990-11142009 | Msa0875090:intron | 30.0% |
| !!! | GATTTTTTCTTCTCTGCATT+AGG | - | chr6_1:11142098-11142117 | None:intergenic | 30.0% |
| !! | AATTATTGGTGCTGGAATTA+TGG | + | chr6_1:11142244-11142263 | Msa0875090:intron | 30.0% |
| !! | ATTATTGGTGCTGGAATTAT+GGG | + | chr6_1:11142245-11142264 | Msa0875090:intron | 30.0% |
| !! | AAATGTGTCATTTACCGAAA+CGG | + | chr6_1:11142772-11142791 | Msa0875090:intron | 30.0% |
| ATAGATTAGACAACCATGTT+AGG | + | chr6_1:11142797-11142816 | Msa0875090:intron | 30.0% | |
| ACGATCAATAAACAACTAGT+TGG | + | chr6_1:11142896-11142915 | Msa0875090:intron | 30.0% | |
| CATGGTTATTGATGCTTATT+TGG | + | chr6_1:11142923-11142942 | Msa0875090:intron | 30.0% | |
| ! | TTTTTCACTCGAGTACAAAT+TGG | + | chr6_1:11142975-11142994 | Msa0875090:intron | 30.0% |
| !! | TTTGTCATAGAAGTGTTACA+TGG | - | chr6_1:11143047-11143066 | None:intergenic | 30.0% |
| GTTATCAAGATTATAAGTGG+CGG | + | chr6_1:11143170-11143189 | Msa0875090:intron | 30.0% | |
| !!! | TGGTTAGTTTTCAGATTAGT+TGG | - | chr6_1:11143445-11143464 | None:intergenic | 30.0% |
| !! | AGGCAGTGTTTTTATATACT+TGG | + | chr6_1:11143546-11143565 | Msa0875090:intron | 30.0% |
| TTCCACGTACTAATAAACAT+CGG | + | chr6_1:11143661-11143680 | Msa0875090:intron | 30.0% | |
| TCCAAGATCAGTATCAAAAT+TGG | - | chr6_1:11143956-11143975 | None:intergenic | 30.0% | |
| CTCAATGCATAGAAAATTAC+AGG | - | chr6_1:11144048-11144067 | None:intergenic | 30.0% | |
| ! | CTGTAATTTTCTATGCATTG+AGG | + | chr6_1:11144046-11144065 | Msa0875090:intron | 30.0% |
| ! | TGATATTTTCCTCATCAAGA+AGG | + | chr6_1:11138007-11138026 | Msa0875090:CDS | 30.0% |
| TGGAAAATAACCCAAATGTT+AGG | - | chr6_1:11144192-11144211 | None:intergenic | 30.0% | |
| AACCAAAACAGATAAGATTC+TGG | + | chr6_1:11144379-11144398 | Msa0875090:intron | 30.0% | |
| GTTCCTTTAATCTGAAAGTT+TGG | - | chr6_1:11144537-11144556 | None:intergenic | 30.0% | |
| ! | TATTCTTCAAAAGTGTGTGA+AGG | + | chr6_1:11144577-11144596 | Msa0875090:intron | 30.0% |
| ACCCTACTCTATTATAAACA+AGG | - | chr6_1:11144619-11144638 | None:intergenic | 30.0% | |
| ATATGATGTTGTAAATGTGG+AGG | + | chr6_1:11144810-11144829 | Msa0875090:three_prime_UTR | 30.0% | |
| TTACAAAGGATAAGAAGTCT+GGG | - | chr6_1:11144860-11144879 | None:intergenic | 30.0% | |
| TCTTATCCTTTGTAACTGTA+AGG | + | chr6_1:11144865-11144884 | Msa0875090:three_prime_UTR | 30.0% | |
| CTTATCCTTTGTAACTGTAA+GGG | + | chr6_1:11144866-11144885 | Msa0875090:three_prime_UTR | 30.0% | |
| TGATAGAATGGTTAAGTTCA+AGG | + | chr6_1:11144933-11144952 | Msa0875090:three_prime_UTR | 30.0% | |
| ! | ATGGTTAAGTTCAAGGTTTT+TGG | + | chr6_1:11144940-11144959 | Msa0875090:three_prime_UTR | 30.0% |
| ! | TGGTTAAGTTCAAGGTTTTT+GGG | + | chr6_1:11144941-11144960 | Msa0875090:three_prime_UTR | 30.0% |
| TTTCTCGAACTCAATATCTC+TGG | + | chr6_1:11134942-11134961 | Msa0875090:intron | 35.0% | |
| TCTTGACACTTAGGTAACAA+AGG | - | chr6_1:11135199-11135218 | None:intergenic | 35.0% | |
| TTTAATGGAGCTTCATTTCC+TGG | + | chr6_1:11135241-11135260 | Msa0875090:CDS | 35.0% | |
| TTAATGGAGCTTCATTTCCT+GGG | + | chr6_1:11135242-11135261 | Msa0875090:CDS | 35.0% | |
| AATTTGTCCACCACAGTTAT+TGG | + | chr6_1:11135274-11135293 | Msa0875090:CDS | 35.0% | |
| TCTCTGTCAATAATGCTGTT+AGG | - | chr6_1:11135369-11135388 | None:intergenic | 35.0% | |
| AACAGCATTATTGACAGAGA+AGG | + | chr6_1:11135369-11135388 | Msa0875090:CDS | 35.0% | |
| TTCTTCCTATGGAAGTCTTA+TGG | + | chr6_1:11135432-11135451 | Msa0875090:CDS | 35.0% | |
| ! | TCTTCCTATGGAAGTCTTAT+GGG | + | chr6_1:11135433-11135452 | Msa0875090:CDS | 35.0% |
| CAGTGCTAGACTTAAGAATA+AGG | - | chr6_1:11135557-11135576 | None:intergenic | 35.0% | |
| GCACTGAAAATTTGTATGTC+TGG | + | chr6_1:11135571-11135590 | Msa0875090:intron | 35.0% | |
| TCACGTCTAAACAGATCAAT+GGG | - | chr6_1:11135640-11135659 | None:intergenic | 35.0% | |
| TTCACGTCTAAACAGATCAA+TGG | - | chr6_1:11135641-11135660 | None:intergenic | 35.0% | |
| ATTGTAGGTGATGTGATTTC+TGG | + | chr6_1:11135693-11135712 | Msa0875090:intron | 35.0% | |
| !! | TTTACAACACTTGCTGTGTT+TGG | + | chr6_1:11135804-11135823 | Msa0875090:CDS | 35.0% |
| TTACAGCAGTGATGATAGAT+TGG | + | chr6_1:11135934-11135953 | Msa0875090:intron | 35.0% | |
| ! | GATTGGCTAAATTGCATTTC+TGG | + | chr6_1:11135951-11135970 | Msa0875090:intron | 35.0% |
| TTCTGGTCCCTTAACTATTT+AGG | + | chr6_1:11135968-11135987 | Msa0875090:intron | 35.0% | |
| CTATTTAGGTAGTATCGCTT+TGG | + | chr6_1:11135982-11136001 | Msa0875090:intron | 35.0% | |
| GTGTAACTGAGAGAAGTTAA+GGG | - | chr6_1:11136038-11136057 | None:intergenic | 35.0% | |
| TGTGTAACTGAGAGAAGTTA+AGG | - | chr6_1:11136039-11136058 | None:intergenic | 35.0% | |
| !! | CACATTTTAGTCATTTCCGT+TGG | + | chr6_1:11136055-11136074 | Msa0875090:intron | 35.0% |
| CTATTTAGGTAGTATCGCTT+TGG | - | chr6_1:11135982-11136001 | None:intergenic | 35.0% | |
| !! | CTATTTTTCTTCACCCAGTT+TGG | - | chr6_1:11136479-11136498 | None:intergenic | 35.0% |
| !! | TCATCCTCTAAAACCTATGT+TGG | + | chr6_1:11136789-11136808 | Msa0875090:intron | 35.0% |
| !! | TCATCCAACATAGGTTTTAG+AGG | - | chr6_1:11136796-11136815 | None:intergenic | 35.0% |
| ! | TTAGAGTACTCATCCAACAT+AGG | - | chr6_1:11136805-11136824 | None:intergenic | 35.0% |
| TTGGGCAAAAATATGAAAGG+GGG | - | chr6_1:11136917-11136936 | None:intergenic | 35.0% | |
| CTTGGGCAAAAATATGAAAG+GGG | - | chr6_1:11136918-11136937 | None:intergenic | 35.0% | |
| CACTTGGGCAAAAATATGAA+AGG | - | chr6_1:11136920-11136939 | None:intergenic | 35.0% | |
| TAATGATACAGGCAATGTAC+CGG | - | chr6_1:11137026-11137045 | None:intergenic | 35.0% | |
| ! | TTCTTTTCCTTGTCATTGCT+GGG | + | chr6_1:11137157-11137176 | Msa0875090:CDS | 35.0% |
| GCTTATATCTGTCACTACAA+TGG | + | chr6_1:11137297-11137316 | Msa0875090:CDS | 35.0% | |
| GTTATGGATTTCCATGAAGA+AGG | + | chr6_1:11137407-11137426 | Msa0875090:intron | 35.0% | |
| TTGGAAATGGAATGAAGTGA+TGG | - | chr6_1:11137462-11137481 | None:intergenic | 35.0% | |
| TAAAGACTAATGCAGTGCAA+AGG | - | chr6_1:11137542-11137561 | None:intergenic | 35.0% | |
| TACTTCATGGATGTATTGTC+TGG | + | chr6_1:11137669-11137688 | Msa0875090:intron | 35.0% | |
| ! | TTCTTTGGGTTCCTTCTATT+TGG | + | chr6_1:11137826-11137845 | Msa0875090:CDS | 35.0% |
| TCATTAAGAGCAGAACCAAA+AGG | - | chr6_1:11137904-11137923 | None:intergenic | 35.0% | |
| CTCAATGCATAGAAAACTAC+AGG | - | chr6_1:11137970-11137989 | None:intergenic | 35.0% | |
| ! | CTGTAGTTTTCTATGCATTG+AGG | + | chr6_1:11137968-11137987 | Msa0875090:CDS | 35.0% |
| TCAATTACTATTGCCCTTGT+TGG | + | chr6_1:11138060-11138079 | Msa0875090:CDS | 35.0% | |
| CAAATTTCATACCCAGCATT+TGG | + | chr6_1:11138100-11138119 | Msa0875090:CDS | 35.0% | |
| TGGAAAATAACCCAAATGCT+GGG | - | chr6_1:11138114-11138133 | None:intergenic | 35.0% | |
| CAAAGTTGACAGAAAAGAAG+TGG | + | chr6_1:11138512-11138531 | Msa0875090:intron | 35.0% | |
| !!! | TATTTATTTTGGGGTAGCCA+TGG | - | chr6_1:11138757-11138776 | None:intergenic | 35.0% |
| AGCGCATAAATTTCACGTAA+GGG | - | chr6_1:11139514-11139533 | None:intergenic | 35.0% | |
| AAGCGCATAAATTTCACGTA+AGG | - | chr6_1:11139515-11139534 | None:intergenic | 35.0% | |
| TTACGTGAAATTTATGCGCT+TGG | + | chr6_1:11139514-11139533 | Msa0875090:intron | 35.0% | |
| !!! | AGGTTAATGCCGTTTTTCAT+GGG | - | chr6_1:11139612-11139631 | None:intergenic | 35.0% |
| !!! | TAGGTTAATGCCGTTTTTCA+TGG | - | chr6_1:11139613-11139632 | None:intergenic | 35.0% |
| CGGCATTAACCTACTTTATT+TGG | + | chr6_1:11139620-11139639 | Msa0875090:intron | 35.0% | |
| CTGATGTGTAACATTGTACA+AGG | - | chr6_1:11139716-11139735 | None:intergenic | 35.0% | |
| TCGGAGAAAATTTCGTCTAA+GGG | - | chr6_1:11139767-11139786 | None:intergenic | 35.0% | |
| ! | AATTTTCTCCGACATTGAGA+TGG | + | chr6_1:11139775-11139794 | Msa0875090:intron | 35.0% |
| ACATATGGTAGCAGCATAAA+AGG | + | chr6_1:11139804-11139823 | Msa0875090:intron | 35.0% | |
| TTCTGCTTTGATCAACAAGA+AGG | + | chr6_1:11140068-11140087 | Msa0875090:CDS | 35.0% | |
| GTTCCTTTCATCTGAAAGTA+TGG | - | chr6_1:11140145-11140164 | None:intergenic | 35.0% | |
| TTTGGCAACAAATATGTAGC+CGG | - | chr6_1:11140429-11140448 | None:intergenic | 35.0% | |
| AGTTTGGATTTGAACATGTG+TGG | + | chr6_1:11140641-11140660 | Msa0875090:intron | 35.0% | |
| ! | CATTGATTGGTTGTAAGAAG+AGG | + | chr6_1:11140747-11140766 | Msa0875090:intron | 35.0% |
| TAAAGTGTGGTATAAGAGAC+AGG | + | chr6_1:11140813-11140832 | Msa0875090:intron | 35.0% | |
| AAGTATGGTATAAGAGACAG+AGG | + | chr6_1:11140871-11140890 | Msa0875090:intron | 35.0% | |
| AAACTCATACAGATAAGGAG+AGG | - | chr6_1:11140981-11141000 | None:intergenic | 35.0% | |
| ACCGAAAACTCATACAGATA+AGG | - | chr6_1:11140986-11141005 | None:intergenic | 35.0% | |
| ! | TTATCTGTATGAGTTTTCGG+TGG | + | chr6_1:11140985-11141004 | Msa0875090:intron | 35.0% |
| TTGTTGTATACAGTGGTTGA+AGG | - | chr6_1:11141373-11141392 | None:intergenic | 35.0% | |
| ATGGATGTTGTTGTATACAG+TGG | - | chr6_1:11141380-11141399 | None:intergenic | 35.0% | |
| TAGTTAAAAGACAGCGGTTT+GGG | - | chr6_1:11141655-11141674 | None:intergenic | 35.0% | |
| TTAGTTAAAAGACAGCGGTT+TGG | - | chr6_1:11141656-11141675 | None:intergenic | 35.0% | |
| CGGTTTGTGAGTCAATTATT+TGG | - | chr6_1:11141790-11141809 | None:intergenic | 35.0% | |
| TAGAAGCAAGAGAAAATGAG+TGG | - | chr6_1:11141860-11141879 | None:intergenic | 35.0% | |
| TGACCTTTAATGTGTACCAA+AGG | + | chr6_1:11141928-11141947 | Msa0875090:intron | 35.0% | |
| CAACCTTTGGTACACATTAA+AGG | - | chr6_1:11141934-11141953 | None:intergenic | 35.0% | |
| TCTTGTGTCTTAGGTAACAA+AGG | - | chr6_1:11142155-11142174 | None:intergenic | 35.0% | |
| ACATCACTTTCTTGTGTCTT+AGG | - | chr6_1:11142164-11142183 | None:intergenic | 35.0% | |
| ! | TTTAGTGGAGCTTCATTTTC+TGG | + | chr6_1:11142197-11142216 | Msa0875090:intron | 35.0% |
| AATTCCAGCACCAATAATTG+TGG | - | chr6_1:11142243-11142262 | None:intergenic | 35.0% | |
| AAAAAGTTGGGAATAGTACC+TGG | + | chr6_1:11142284-11142303 | Msa0875090:intron | 35.0% | |
| TTCTTCCTATGGAAGTCTTA+TGG | + | chr6_1:11135432-11135451 | Msa0875090:CDS | 35.0% | |
| ! | TCTTCCTATGGAAGTCTTAT+GGG | + | chr6_1:11135433-11135452 | Msa0875090:CDS | 35.0% |
| ATTGTAGGTGATGTGATTTC+TGG | + | chr6_1:11135693-11135712 | Msa0875090:intron | 35.0% | |
| !! | ATTTCTGGAACAACTTCAAG+TGG | + | chr6_1:11142603-11142622 | Msa0875090:intron | 35.0% |
| ! | TACTTTCGCAACATTTGTTG+TGG | + | chr6_1:11142695-11142714 | Msa0875090:intron | 35.0% |
| ! | GATTGGTGAGTGATTTTTCT+TGG | + | chr6_1:11142743-11142762 | Msa0875090:intron | 35.0% |
| TGTCTAATCTATAGCCGTTT+CGG | - | chr6_1:11142789-11142808 | None:intergenic | 35.0% | |
| TTTGAGTCATCTTCCTAACA+TGG | - | chr6_1:11142813-11142832 | None:intergenic | 35.0% | |
| ! | AAACAACTAGTTGGTACACA+TGG | + | chr6_1:11142905-11142924 | Msa0875090:intron | 35.0% |
| ! | CTTGATAACTGAGATACCTA+CGG | - | chr6_1:11143159-11143178 | None:intergenic | 35.0% |
| ATAGAATGAGGTGATGCTTA+TGG | - | chr6_1:11143420-11143439 | None:intergenic | 35.0% | |
| ! | GATTAGTTGGACATAGAATG+AGG | - | chr6_1:11143432-11143451 | None:intergenic | 35.0% |
| GTGCATCATTAGTCAAAACA+CGG | + | chr6_1:11143516-11143535 | Msa0875090:intron | 35.0% | |
| !!! | TGCATTTTTTGGTTTAGGCT+TGG | + | chr6_1:11143605-11143624 | Msa0875090:intron | 35.0% |
| TTGCAAAAGTTTCAGCTATG+TGG | + | chr6_1:11143690-11143709 | Msa0875090:intron | 35.0% | |
| TGCAAAAGTTTCAGCTATGT+GGG | + | chr6_1:11143691-11143710 | Msa0875090:intron | 35.0% | |
| TCAAAGCATAGAGAATGAAC+TGG | + | chr6_1:11143807-11143826 | Msa0875090:intron | 35.0% | |
| TACTTACTGACAAGCTTCTT+TGG | + | chr6_1:11143889-11143908 | Msa0875090:intron | 35.0% | |
| ACTTACTGACAAGCTTCTTT+GGG | + | chr6_1:11143890-11143909 | Msa0875090:intron | 35.0% | |
| ! | TTCTTTGGGTTCCTTCTATT+TGG | + | chr6_1:11137826-11137845 | Msa0875090:CDS | 35.0% |
| !! | GCCAATTTTGATACTGATCT+TGG | + | chr6_1:11143952-11143971 | Msa0875090:intron | 35.0% |
| CTGAAGTTATCAACAACCAA+AGG | - | chr6_1:11144111-11144130 | None:intergenic | 35.0% | |
| GAGGAAGATAATGAGAACAA+GGG | - | chr6_1:11144154-11144173 | None:intergenic | 35.0% | |
| CTTGTTCTCATTATCTTCCT+CGG | + | chr6_1:11144153-11144172 | Msa0875090:intron | 35.0% | |
| !! | TGGGTTATTTTCCAATTCAC+TGG | + | chr6_1:11144198-11144217 | Msa0875090:intron | 35.0% |
| ! | TAAGCATTTTCTTTTCCTGC+AGG | + | chr6_1:11144339-11144358 | Msa0875090:intron | 35.0% |
| ! | AAGCATTTTCTTTTCCTGCA+GGG | + | chr6_1:11144340-11144359 | Msa0875090:intron | 35.0% |
| ! | AGCCAGAATCTTATCTGTTT+TGG | - | chr6_1:11144384-11144403 | None:intergenic | 35.0% |
| GTTACAAAGGATAAGAAGTC+TGG | - | chr6_1:11144861-11144880 | None:intergenic | 35.0% | |
| ! | TCTGCATTATTGCTTGCTAA+AGG | + | chr6_1:11144908-11144927 | Msa0875090:three_prime_UTR | 35.0% |
| TTGCTAAAGGACTGATAGAA+TGG | + | chr6_1:11144921-11144940 | Msa0875090:three_prime_UTR | 35.0% | |
| ! | CCATCTGTTTCTTGACACTT+AGG | - | chr6_1:11135208-11135227 | None:intergenic | 40.0% |
| CCTAAGTGTCAAGAAACAGA+TGG | + | chr6_1:11135205-11135224 | Msa0875090:CDS | 40.0% | |
| TAATGGAGCTTCATTTCCTG+GGG | + | chr6_1:11135243-11135262 | Msa0875090:CDS | 40.0% | |
| TTGCGTCAAAAAGTTGGGAA+TGG | + | chr6_1:11135321-11135340 | Msa0875090:CDS | 40.0% | |
| AAAAAGTTGGGAATGGTACC+TGG | + | chr6_1:11135328-11135347 | Msa0875090:CDS | 40.0% | |
| AGGCAATTGAGTTCATGATC+AGG | + | chr6_1:11135389-11135408 | Msa0875090:CDS | 40.0% | |
| ! | AGTTCATGATCAGGTTTTCG+AGG | + | chr6_1:11135398-11135417 | Msa0875090:CDS | 40.0% |
| ! | GTTCATGATCAGGTTTTCGA+GGG | + | chr6_1:11135399-11135418 | Msa0875090:CDS | 40.0% |
| ATCTCCCATAAGACTTCCAT+AGG | - | chr6_1:11135440-11135459 | None:intergenic | 40.0% | |
| ! | AGTCTTATGGGAGATACCTT+TGG | + | chr6_1:11135445-11135464 | Msa0875090:CDS | 40.0% |
| GTCTTATGGGAGATACCTTT+GGG | + | chr6_1:11135446-11135465 | Msa0875090:CDS | 40.0% | |
| ! | GGAGATACCTTTGGGAAATA+CGG | + | chr6_1:11135454-11135473 | Msa0875090:CDS | 40.0% |
| ! | TGCTTTTCCGTATTTCCCAA+AGG | - | chr6_1:11135464-11135483 | None:intergenic | 40.0% |
| TGATCTGTTTAGACGTGAAC+AGG | + | chr6_1:11135642-11135661 | Msa0875090:intron | 40.0% | |
| ACAGGTTGCATGATTCAGTT+TGG | + | chr6_1:11135660-11135679 | Msa0875090:intron | 40.0% | |
| ! | ATTCGCTTTAAGCTGACCAA+AGG | - | chr6_1:11135831-11135850 | None:intergenic | 40.0% |
| TTGGTCAGCTTAAAGCGAAT+TGG | + | chr6_1:11135831-11135850 | Msa0875090:CDS | 40.0% | |
| TAGGAAGATGACTCAAACAC+TGG | + | chr6_1:11136364-11136383 | Msa0875090:intron | 40.0% | |
| AAGATGACTCAAACACTGGA+TGG | + | chr6_1:11136368-11136387 | Msa0875090:intron | 40.0% | |
| ! | TGTTCAGGTTATGTGATAGG+AGG | + | chr6_1:11136734-11136753 | Msa0875090:intron | 40.0% |
| CTAAACTCTCGAGTGCAAAT+TGG | + | chr6_1:11136821-11136840 | Msa0875090:intron | 40.0% | |
| !! | TTGAGCACTGGTAATGATAC+AGG | - | chr6_1:11137037-11137056 | None:intergenic | 40.0% |
| !! | TGTGTTAAAGAAGTGTCGCA+TGG | - | chr6_1:11137066-11137085 | None:intergenic | 40.0% |
| ACATTCAGCTGCATTATCTG+TGG | + | chr6_1:11137083-11137102 | Msa0875090:intron | 40.0% | |
| ! | GTTCTTTTCCTTGTCATTGC+TGG | + | chr6_1:11137156-11137175 | Msa0875090:CDS | 40.0% |
| ! | TCTTTTCCTTGTCATTGCTG+GGG | + | chr6_1:11137158-11137177 | Msa0875090:CDS | 40.0% |
| GTAATGATAGGGAAGAGTCT+GGG | - | chr6_1:11137225-11137244 | None:intergenic | 40.0% | |
| AGTAATGATAGGGAAGAGTC+TGG | - | chr6_1:11137226-11137245 | None:intergenic | 40.0% | |
| ATATAAGCTGTCATCAGCAC+AGG | - | chr6_1:11137285-11137304 | None:intergenic | 40.0% | |
| !!! | GGGAACTGGTTTTTAAGCAA+AGG | - | chr6_1:11137340-11137359 | None:intergenic | 40.0% |
| GATTTCCATGAAGAAGGTTG+AGG | + | chr6_1:11137413-11137432 | Msa0875090:intron | 40.0% | |
| TAAGACCTCAACCTTCTTCA+TGG | - | chr6_1:11137421-11137440 | None:intergenic | 40.0% | |
| TTCATGGATGTATTGTCTGG+TGG | + | chr6_1:11137672-11137691 | Msa0875090:intron | 40.0% | |
| ! | CACTGAAGAGCATAGAGTAA+GGG | - | chr6_1:11137791-11137810 | None:intergenic | 40.0% |
| ! | ACACTGAAGAGCATAGAGTA+AGG | - | chr6_1:11137792-11137811 | None:intergenic | 40.0% |
| ! | TACGTACTGACAAGCTTCTT+TGG | + | chr6_1:11137811-11137830 | Msa0875090:CDS | 40.0% |
| ! | ACGTACTGACAAGCTTCTTT+GGG | + | chr6_1:11137812-11137831 | Msa0875090:CDS | 40.0% |
| GAGTTCCTTCACCAAATAGA+AGG | - | chr6_1:11137840-11137859 | None:intergenic | 40.0% | |
| AATCAAAGGCCTTCTTGATG+AGG | - | chr6_1:11138019-11138038 | None:intergenic | 40.0% | |
| CTGGAAAATAACCCAAATGC+TGG | - | chr6_1:11138115-11138134 | None:intergenic | 40.0% | |
| !! | TGGGTTATTTTCCAGTTCTC+TGG | + | chr6_1:11138120-11138139 | Msa0875090:CDS | 40.0% |
| CGGGATTCATCATAGTGAAT+CGG | + | chr6_1:11138576-11138595 | Msa0875090:intron | 40.0% | |
| CGGAGAAAATTTCGTCTAAG+GGG | - | chr6_1:11139766-11139785 | None:intergenic | 40.0% | |
| GTCGGAGAAAATTTCGTCTA+AGG | - | chr6_1:11139768-11139787 | None:intergenic | 40.0% | |
| TTGAGATGGCCATTGACATA+TGG | + | chr6_1:11139789-11139808 | Msa0875090:intron | 40.0% | |
| ATGCTGCTACCATATGTCAA+TGG | - | chr6_1:11139801-11139820 | None:intergenic | 40.0% | |
| ! | TCTGATAGGGTTTTGCCTTA+GGG | - | chr6_1:11139841-11139860 | None:intergenic | 40.0% |
| ! | AGAGAAAAAGGGCTCTGATA+GGG | - | chr6_1:11139854-11139873 | None:intergenic | 40.0% |
| ! | AAGAGAAAAAGGGCTCTGAT+AGG | - | chr6_1:11139855-11139874 | None:intergenic | 40.0% |
| ! | GTCTGTCCTTATGATAGTGA+TGG | + | chr6_1:11140008-11140027 | Msa0875090:CDS | 40.0% |
| ! | TGTCCTTATGATAGTGATGG+CGG | + | chr6_1:11140011-11140030 | Msa0875090:CDS | 40.0% |
| AAACCGCCATCACTATCATA+AGG | - | chr6_1:11140017-11140036 | None:intergenic | 40.0% | |
| AACAAGGTTGAACATGTTGC+AGG | - | chr6_1:11140276-11140295 | None:intergenic | 40.0% | |
| CACAAATCCGAAGCTGTATA+TGG | + | chr6_1:11140323-11140342 | Msa0875090:intron | 40.0% | |
| ACCATGTCCATATACAGCTT+CGG | - | chr6_1:11140333-11140352 | None:intergenic | 40.0% | |
| ! | TGCTGTTGGTTGTGAAAGAA+TGG | + | chr6_1:11140575-11140594 | Msa0875090:intron | 40.0% |
| ! | TGGTCAAGTTCAAGCAGTTT+TGG | + | chr6_1:11140595-11140614 | Msa0875090:intron | 40.0% |
| ! | GGTCAAGTTCAAGCAGTTTT+GGG | + | chr6_1:11140596-11140615 | Msa0875090:intron | 40.0% |
| TCATACAGATAAGGAGAGGT+CGG | - | chr6_1:11140977-11140996 | None:intergenic | 40.0% | |
| CATCACGTGGTGATAATTGA+TGG | + | chr6_1:11141256-11141275 | Msa0875090:intron | 40.0% | |
| ! | CGTGGTGATAATTGATGGTT+TGG | + | chr6_1:11141261-11141280 | Msa0875090:intron | 40.0% |
| GTCATAATCACATGTCACAC+CGG | - | chr6_1:11141477-11141496 | None:intergenic | 40.0% | |
| AAGCAAGAGAAAATGAGTGG+TGG | - | chr6_1:11141857-11141876 | None:intergenic | 40.0% | |
| !! | CAAAACTTTGGAGCAACCTT+TGG | - | chr6_1:11141947-11141966 | None:intergenic | 40.0% |
| TCTTCTCTGCATTAGGTACA+TGG | - | chr6_1:11142091-11142110 | None:intergenic | 40.0% | |
| TCAACCACAATTATTGGTGC+TGG | + | chr6_1:11142236-11142255 | Msa0875090:intron | 40.0% | |
| CCTGCATGTGTGAAAAAGTT+GGG | + | chr6_1:11142272-11142291 | Msa0875090:intron | 40.0% | |
| TCTCTGTCAGTAAAGCTGTT+AGG | - | chr6_1:11142325-11142344 | None:intergenic | 40.0% | |
| !!! | ATAATCAGGTTTTCTAGGGC+AGG | + | chr6_1:11142359-11142378 | Msa0875090:intron | 40.0% |
| !!! | TAATCAGGTTTTCTAGGGCA+GGG | + | chr6_1:11142360-11142379 | Msa0875090:intron | 40.0% |
| ATCACCCATAAGACTTCCAT+AGG | - | chr6_1:11142396-11142415 | None:intergenic | 40.0% | |
| ! | CGCTTTTCCATATTTCCCAT+AGG | - | chr6_1:11142420-11142439 | None:intergenic | 40.0% |
| !! | GAAATATGGAAAAGCGTCGT+TGG | + | chr6_1:11142424-11142443 | Msa0875090:intron | 40.0% |
| TCAAGTGGAATTCACCATGT+TGG | + | chr6_1:11142618-11142637 | Msa0875090:intron | 40.0% | |
| !! | ATTTGTTGTGGTTGCACCTT+TGG | + | chr6_1:11142707-11142726 | Msa0875090:intron | 40.0% |
| TTAGGAAGATGACTCAAACG+CGG | + | chr6_1:11142815-11142834 | Msa0875090:intron | 40.0% | |
| CGAGTGAAAAAAGTGAGCAT+TGG | - | chr6_1:11142966-11142985 | None:intergenic | 40.0% | |
| ! | CTTTTCCTTATCATTGCCGT+AGG | + | chr6_1:11143140-11143159 | Msa0875090:intron | 40.0% |
| AGATACCTACGGCAATGATA+AGG | - | chr6_1:11143148-11143167 | None:intergenic | 40.0% | |
| AAGATTATAAGTGGCGGCAT+TGG | + | chr6_1:11143176-11143195 | Msa0875090:intron | 40.0% | |
| AGATTATAAGTGGCGGCATT+GGG | + | chr6_1:11143177-11143196 | Msa0875090:intron | 40.0% | |
| ACCATTGTAGTGACATACGT+AGG | - | chr6_1:11143282-11143301 | None:intergenic | 40.0% | |
| AGTCAAAACACGGAACACTA+AGG | + | chr6_1:11143526-11143545 | Msa0875090:intron | 40.0% | |
| ! | TAGTACGTGGAATTAGCTTG+TGG | - | chr6_1:11143653-11143672 | None:intergenic | 40.0% |
| TGCCGATGTTTATTAGTACG+TGG | - | chr6_1:11143666-11143685 | None:intergenic | 40.0% | |
| AAAAGTTTCAGCTATGTGGG+AGG | + | chr6_1:11143694-11143713 | Msa0875090:intron | 40.0% | |
| AAGCATAGAGAATGAACTGG+AGG | + | chr6_1:11143810-11143829 | Msa0875090:intron | 40.0% | |
| TTCCCTTACTCTATGCTCTT+CGG | + | chr6_1:11137786-11137805 | Msa0875090:CDS | 40.0% | |
| GAACTCCTTCACCAAATAGA+AGG | - | chr6_1:11143918-11143937 | None:intergenic | 40.0% | |
| ACTGATCTTGGAATTCCCTT+CGG | + | chr6_1:11143964-11143983 | Msa0875090:intron | 40.0% | |
| CGAGGAAGATAATGAGAACA+AGG | - | chr6_1:11144155-11144174 | None:intergenic | 40.0% | |
| ! | TAGGTATGAAATTTGCTCCG+AGG | - | chr6_1:11144173-11144192 | None:intergenic | 40.0% |
| ! | TGTCCTTATGATGGTATTGG+CGG | + | chr6_1:11144403-11144422 | Msa0875090:intron | 40.0% |
| AAACCGCCAATACCATCATA+AGG | - | chr6_1:11144409-11144428 | None:intergenic | 40.0% | |
| AACAAGGTTGAACATGTTCC+AGG | - | chr6_1:11144603-11144622 | None:intergenic | 40.0% | |
| ATAAGAAGTCTGGGAAATGG+AGG | - | chr6_1:11144851-11144870 | None:intergenic | 40.0% | |
| AGGATAAGAAGTCTGGGAAA+TGG | - | chr6_1:11144854-11144873 | None:intergenic | 40.0% | |
| ATCCTTTGTAACTGTAAGGG+AGG | + | chr6_1:11144869-11144888 | Msa0875090:three_prime_UTR | 40.0% | |
| TTCCTCCCTTACAGTTACAA+AGG | - | chr6_1:11144874-11144893 | None:intergenic | 40.0% | |
| ACTGTAAGGGAGGAATTTGT+TGG | + | chr6_1:11144879-11144898 | Msa0875090:three_prime_UTR | 40.0% | |
| !! | GCATTAGCTACAAGAGCATC+AGG | - | chr6_1:11135136-11135155 | None:intergenic | 45.0% |
| GACAAATTGAAAACAGCCCC+AGG | - | chr6_1:11135262-11135281 | None:intergenic | 45.0% | |
| !! | AGTTATTGGTGCTGGGATCA+TGG | + | chr6_1:11135288-11135307 | Msa0875090:CDS | 45.0% |
| !! | GTTATTGGTGCTGGGATCAT+GGG | + | chr6_1:11135289-11135308 | Msa0875090:CDS | 45.0% |
| ! | TCCCAACTTTTTGACGCAAG+CGG | - | chr6_1:11135320-11135339 | None:intergenic | 45.0% |
| AGGATTATGGCAAGAAGACC+AGG | - | chr6_1:11135349-11135368 | None:intergenic | 45.0% | |
| GCAGGGAATCTTTCTTCCTA+TGG | + | chr6_1:11135421-11135440 | Msa0875090:CDS | 45.0% | |
| ! | TGGGAAATACGGAAAAGCAC+TGG | + | chr6_1:11135465-11135484 | Msa0875090:CDS | 45.0% |
| !! | GTGATTTCTGGAACGACTTC+AGG | + | chr6_1:11135705-11135724 | Msa0875090:CDS | 45.0% |
| !! | ATTTCTGGAACGACTTCAGG+TGG | + | chr6_1:11135708-11135727 | Msa0875090:CDS | 45.0% |
| ATCCTTCAAGGATACCAGGA+TGG | - | chr6_1:11135740-11135759 | None:intergenic | 45.0% | |
| ATCCTGGTATCCTTGAAGGA+TGG | + | chr6_1:11135739-11135758 | Msa0875090:CDS | 45.0% | |
| AACCATCCTTCAAGGATACC+AGG | - | chr6_1:11135744-11135763 | None:intergenic | 45.0% | |
| GGTATCCTTGAAGGATGGTT+TGG | + | chr6_1:11135744-11135763 | Msa0875090:CDS | 45.0% | |
| !! | AAGGATGGTTTGGTGTCCAT+TGG | + | chr6_1:11135754-11135773 | Msa0875090:CDS | 45.0% |
| !! | ACTTGCTGTGTTTGGACCTT+TGG | + | chr6_1:11135812-11135831 | Msa0875090:CDS | 45.0% |
| GACCAAAATGTGTGACGAAG+AGG | + | chr6_1:11136230-11136249 | Msa0875090:intron | 45.0% | |
| ! | CTCCTCTTCGTCACACATTT+TGG | - | chr6_1:11136235-11136254 | None:intergenic | 45.0% |
| TGTGTGACGAAGAGGAGTTA+AGG | + | chr6_1:11136238-11136257 | Msa0875090:intron | 45.0% | |
| GTGTGACGAAGAGGAGTTAA+GGG | + | chr6_1:11136239-11136258 | Msa0875090:intron | 45.0% | |
| GACTCAAACACTGGATGGTA+TGG | + | chr6_1:11136373-11136392 | Msa0875090:intron | 45.0% | |
| TTTCTTCACCCAGTTTGGGA+CGG | - | chr6_1:11136474-11136493 | None:intergenic | 45.0% | |
| CAGGTTATGTGATAGGAGGA+TGG | + | chr6_1:11136738-11136757 | Msa0875090:intron | 45.0% | |
| ! | CTTTTCCTTGTCATTGCTGG+GGG | + | chr6_1:11137159-11137178 | Msa0875090:CDS | 45.0% |
| ! | TTTTCCTTGTCATTGCTGGG+GGG | + | chr6_1:11137160-11137179 | Msa0875090:CDS | 45.0% |
| ATGGAATGAAGTGATGGCTG+TGG | - | chr6_1:11137456-11137475 | None:intergenic | 45.0% | |
| TGTGCACCATTAGTTGGAAC+TGG | + | chr6_1:11137629-11137648 | Msa0875090:intron | 45.0% | |
| GTGCACCATTAGTTGGAACT+GGG | + | chr6_1:11137630-11137649 | Msa0875090:intron | 45.0% | |
| GTCTTCCCAGTTCCAACTAA+TGG | - | chr6_1:11137638-11137657 | None:intergenic | 45.0% | |
| ATGAACTGGAGGATTCCTCA+CGG | + | chr6_1:11137743-11137762 | Msa0875090:CDS | 45.0% | |
| ! | GGGTTCCTTCTATTTGGTGA+AGG | + | chr6_1:11137832-11137851 | Msa0875090:CDS | 45.0% |
| GCATTGAGGGTCAACATAGA+TGG | + | chr6_1:11137982-11138001 | Msa0875090:CDS | 45.0% | |
| GAGGAAGATAGTGCCAACAA+GGG | - | chr6_1:11138076-11138095 | None:intergenic | 45.0% | |
| CTTGTTGGCACTATCTTCCT+CGG | + | chr6_1:11138075-11138094 | Msa0875090:CDS | 45.0% | |
| TTGTTGGCACTATCTTCCTC+GGG | + | chr6_1:11138076-11138095 | Msa0875090:CDS | 45.0% | |
| TTCCAGCTGCAATCACTTTG+AGG | + | chr6_1:11138175-11138194 | Msa0875090:CDS | 45.0% | |
| !! | CAATCACTTTGAGGTGAGTC+TGG | + | chr6_1:11138184-11138203 | Msa0875090:intron | 45.0% |
| GTTGACAGAAAAGAAGTGGC+TGG | + | chr6_1:11138516-11138535 | Msa0875090:intron | 45.0% | |
| GGCTACCTCATGTTAGTGAA+GGG | - | chr6_1:11138736-11138755 | None:intergenic | 45.0% | |
| TGGCTACCTCATGTTAGTGA+AGG | - | chr6_1:11138737-11138756 | None:intergenic | 45.0% | |
| TCACTAACATGAGGTAGCCA+TGG | + | chr6_1:11138737-11138756 | Msa0875090:intron | 45.0% | |
| GTCAATGGCCATCTCAATGT+CGG | - | chr6_1:11139786-11139805 | None:intergenic | 45.0% | |
| ! | CTCTGATAGGGTTTTGCCTT+AGG | - | chr6_1:11139842-11139861 | None:intergenic | 45.0% |
| TCCGAAGCTGTATATGGACA+TGG | + | chr6_1:11140329-11140348 | Msa0875090:intron | 45.0% | |
| GGAGATGAGACCCAGAATAT+AGG | - | chr6_1:11140485-11140504 | None:intergenic | 45.0% | |
| ! | ATTGCTGGCTAAAGGACTCA+AGG | + | chr6_1:11140548-11140567 | Msa0875090:intron | 45.0% |
| ! | TTGCTGGCTAAAGGACTCAA+GGG | + | chr6_1:11140549-11140568 | Msa0875090:intron | 45.0% |
| ! | TTAAAAGACAGCGGTTTGGG+TGG | - | chr6_1:11141652-11141671 | None:intergenic | 45.0% |
| !! | CTGATTCAAGCGACTAGTCT+GGG | + | chr6_1:11141701-11141720 | Msa0875090:intron | 45.0% |
| GCCTGCATGTGTGAAAAAGT+TGG | + | chr6_1:11142271-11142290 | Msa0875090:intron | 45.0% | |
| !!! | CCCAACTTTTTCACACATGC+AGG | - | chr6_1:11142275-11142294 | None:intergenic | 45.0% |
| AGGACTATGACAGTAAGACC+AGG | - | chr6_1:11142305-11142324 | None:intergenic | 45.0% | |
| GCAGGGAAACTTTCTTCCTA+TGG | + | chr6_1:11142377-11142396 | Msa0875090:intron | 45.0% | |
| ! | AGTCTTATGGGTGATGCCTA+TGG | + | chr6_1:11142401-11142420 | Msa0875090:intron | 45.0% |
| GTCTTATGGGTGATGCCTAT+GGG | + | chr6_1:11142402-11142421 | Msa0875090:intron | 45.0% | |
| GGTGATGCCTATGGGAAATA+TGG | + | chr6_1:11142410-11142429 | Msa0875090:intron | 45.0% | |
| GTACATGATCAGACTACCGA+TGG | - | chr6_1:11142468-11142487 | None:intergenic | 45.0% | |
| ATCCTTCAAGGACACCAACA+TGG | - | chr6_1:11142635-11142654 | None:intergenic | 45.0% | |
| ! | ATGTTGGTGTCCTTGAAGGA+TGG | + | chr6_1:11142634-11142653 | Msa0875090:intron | 45.0% |
| !! | AAGGATGGTTTGGTGTCCAT+TGG | + | chr6_1:11135754-11135773 | Msa0875090:CDS | 45.0% |
| !! | CACCTTTGGTCAGCTTTAAG+CGG | + | chr6_1:11142721-11142740 | Msa0875090:intron | 45.0% |
| ATCCGCTTAAAGCTGACCAA+AGG | - | chr6_1:11142726-11142745 | None:intergenic | 45.0% | |
| !! | TTGGTCAGCTTTAAGCGGAT+TGG | + | chr6_1:11142726-11142745 | Msa0875090:intron | 45.0% |
| AGATGACTCAAACGCGGTAA+TGG | + | chr6_1:11142821-11142840 | Msa0875090:intron | 45.0% | |
| ! | ACTCAAACGCGGTAATGGTA+TGG | + | chr6_1:11142826-11142845 | Msa0875090:intron | 45.0% |
| TTCACGTCTGCACTGTCAAT+TGG | + | chr6_1:11143107-11143126 | Msa0875090:intron | 45.0% | |
| AAGCTGCATCAGTAATCACC+GGG | - | chr6_1:11143217-11143236 | None:intergenic | 45.0% | |
| GAAGCTGCATCAGTAATCAC+CGG | - | chr6_1:11143218-11143237 | None:intergenic | 45.0% | |
| GCCTACGTATGTCACTACAA+TGG | + | chr6_1:11143278-11143297 | Msa0875090:intron | 45.0% | |
| ATGAACTGGAGGATTCCTCA+CGG | + | chr6_1:11137743-11137762 | Msa0875090:CDS | 45.0% | |
| ! | CACCGAAGAGCATAGAGTAA+GGG | - | chr6_1:11143869-11143888 | None:intergenic | 45.0% |
| ! | ACACCGAAGAGCATAGAGTA+AGG | - | chr6_1:11143870-11143889 | None:intergenic | 45.0% |
| ! | GGGTTCCTTCTATTTGGTGA+AGG | + | chr6_1:11137832-11137851 | Msa0875090:CDS | 45.0% |
| GCATTGAGGTTCAACGTAGA+TGG | + | chr6_1:11144060-11144079 | Msa0875090:intron | 45.0% | |
| TTCCTCATCAAGAAGGCCTT+TGG | + | chr6_1:11138014-11138033 | Msa0875090:CDS | 45.0% | |
| AACCAAAGGCCTTCTTGATG+AGG | - | chr6_1:11144097-11144116 | None:intergenic | 45.0% | |
| TTCCAATTCACTGGAGCAAC+AGG | + | chr6_1:11144207-11144226 | Msa0875090:intron | 45.0% | |
| !! | CAATCACTCTGAGGTGAGTT+TGG | + | chr6_1:11144262-11144281 | Msa0875090:intron | 45.0% |
| TATGTTGAATCGATCCCTGC+AGG | - | chr6_1:11144357-11144376 | None:intergenic | 45.0% | |
| ! | GATTCTGGCTGTCCTTATGA+TGG | + | chr6_1:11144394-11144413 | Msa0875090:intron | 45.0% |
| GGCTGTCCTTATGATGGTAT+TGG | + | chr6_1:11144400-11144419 | Msa0875090:intron | 45.0% | |
| ! | TTCAAAAGTGTGTGAAGGCC+TGG | + | chr6_1:11144582-11144601 | Msa0875090:intron | 45.0% |
| TTTCTCTCGCTCAGTCATGT+CGG | - | chr6_1:11144707-11144726 | None:intergenic | 45.0% | |
| !!! | TTTTATTTTTTCTTTAAATT+TGG | + | chr6_1:11139488-11139507 | Msa0875090:intron | 5.0% |
| !!! | AAATTTTCAAAAAATAAAAA+AGG | + | chr6_1:11142031-11142050 | Msa0875090:intron | 5.0% |
| TCCACCACAGTTATTGGTGC+TGG | + | chr6_1:11135280-11135299 | Msa0875090:CDS | 50.0% | |
| ! | CCACCACAGTTATTGGTGCT+GGG | + | chr6_1:11135281-11135300 | Msa0875090:CDS | 50.0% |
| GATCCCAGCACCAATAACTG+TGG | - | chr6_1:11135287-11135306 | None:intergenic | 50.0% | |
| ! | CCCAACTTTTTGACGCAAGC+GGG | - | chr6_1:11135319-11135338 | None:intergenic | 50.0% |
| CCCGCTTGCGTCAAAAAGTT+GGG | + | chr6_1:11135316-11135335 | Msa0875090:CDS | 50.0% | |
| !! | ATGATCAGGTTTTCGAGGGC+AGG | + | chr6_1:11135403-11135422 | Msa0875090:CDS | 50.0% |
| !! | TGATCAGGTTTTCGAGGGCA+GGG | + | chr6_1:11135404-11135423 | Msa0875090:CDS | 50.0% |
| TCAGGTGGAATTCACCATCC+TGG | + | chr6_1:11135723-11135742 | Msa0875090:CDS | 50.0% | |
| CACCATCCTGGTATCCTTGA+AGG | + | chr6_1:11135735-11135754 | Msa0875090:CDS | 50.0% | |
| GGACACCAAACCATCCTTCA+AGG | - | chr6_1:11135752-11135771 | None:intergenic | 50.0% | |
| !! | GATGGTTTGGTGTCCATTGG+TGG | + | chr6_1:11135757-11135776 | Msa0875090:CDS | 50.0% |
| !! | TTTGGTGTCCATTGGTGGAC+TGG | + | chr6_1:11135762-11135781 | Msa0875090:CDS | 50.0% |
| !! | TTGGTGTCCATTGGTGGACT+GGG | + | chr6_1:11135763-11135782 | Msa0875090:CDS | 50.0% |
| TGATTCCTTCCGTCCCAAAC+TGG | + | chr6_1:11136462-11136481 | Msa0875090:intron | 50.0% | |
| GATTCCTTCCGTCCCAAACT+GGG | + | chr6_1:11136463-11136482 | Msa0875090:intron | 50.0% | |
| GCATGGACATAGTTGAGCAC+TGG | - | chr6_1:11137049-11137068 | None:intergenic | 50.0% | |
| TCTGGCTGTGCACCATTAGT+TGG | + | chr6_1:11137623-11137642 | Msa0875090:intron | 50.0% | |
| CGAGGAAGATAGTGCCAACA+AGG | - | chr6_1:11138077-11138096 | None:intergenic | 50.0% | |
| TGTTGGCACTATCTTCCTCG+GGG | + | chr6_1:11138077-11138096 | Msa0875090:CDS | 50.0% | |
| TGGGTATGAAATTTGCCCCG+AGG | - | chr6_1:11138095-11138114 | None:intergenic | 50.0% | |
| !! | TTCCAGTTCTCTGGAGCAAC+AGG | + | chr6_1:11138129-11138148 | Msa0875090:CDS | 50.0% |
| CACCTCAAAGTGATTGCAGC+TGG | - | chr6_1:11138180-11138199 | None:intergenic | 50.0% | |
| CGTAGCCCTTCACTAACATG+AGG | + | chr6_1:11138728-11138747 | Msa0875090:intron | 50.0% | |
| ! | TTTCGTCTAAGGGGTGTGCA+TGG | - | chr6_1:11139757-11139776 | None:intergenic | 50.0% |
| AAGGCAGAGAGAAAGCCCTA+AGG | + | chr6_1:11139823-11139842 | Msa0875090:intron | 50.0% | |
| !! | GGCGGTTTTGTCAAATGCTG+TGG | + | chr6_1:11140029-11140048 | Msa0875090:CDS | 50.0% |
| ! | TAGGTTGAACACCGTTACCG+AGG | + | chr6_1:11140943-11140962 | Msa0875090:intron | 50.0% |
| CGGAGTTCAAACCTCGGTAA+CGG | - | chr6_1:11140957-11140976 | None:intergenic | 50.0% | |
| AGAGGTCGGAGTTCAAACCT+CGG | - | chr6_1:11140963-11140982 | None:intergenic | 50.0% | |
| ! | CCAGACTAGTCGCTTGAATC+AGG | - | chr6_1:11141703-11141722 | None:intergenic | 50.0% |
| ! | CCTGATTCAAGCGACTAGTC+TGG | + | chr6_1:11141700-11141719 | Msa0875090:intron | 50.0% |
| ! | CACCATGTTGGTGTCCTTGA+AGG | + | chr6_1:11142630-11142649 | Msa0875090:intron | 50.0% |
| GGTGTCCTTGAAGGATGGTT+TGG | + | chr6_1:11142639-11142658 | Msa0875090:intron | 50.0% | |
| GGACACCAAACCATCCTTCA+AGG | - | chr6_1:11135752-11135771 | None:intergenic | 50.0% | |
| !! | GATGGTTTGGTGTCCATTGG+TGG | + | chr6_1:11135757-11135776 | Msa0875090:CDS | 50.0% |
| !! | TTTGGTGTCCATTGGTGGAC+TGG | + | chr6_1:11135762-11135781 | Msa0875090:CDS | 50.0% |
| !! | TTGGTGTCCATTGGTGGACT+GGG | + | chr6_1:11135763-11135782 | Msa0875090:CDS | 50.0% |
| GTAATCACCGGGAAGAGTCT+TGG | - | chr6_1:11143206-11143225 | None:intergenic | 50.0% | |
| AGGATTCCTCACGGATACGT+GGG | + | chr6_1:11143830-11143849 | Msa0875090:intron | 50.0% | |
| TCATTGAGCGCAGAACCGAA+GGG | - | chr6_1:11143982-11144001 | None:intergenic | 50.0% | |
| ATCATTGAGCGCAGAACCGA+AGG | - | chr6_1:11143983-11144002 | None:intergenic | 50.0% | |
| CACCTGTTGCTCCAGTGAAT+TGG | - | chr6_1:11144212-11144231 | None:intergenic | 50.0% | |
| TTCCAGCTGCAATCACTCTG+AGG | + | chr6_1:11144253-11144272 | Msa0875090:intron | 50.0% | |
| TCTGACGCCGTATATGGATG+TGG | + | chr6_1:11144656-11144675 | Msa0875090:three_prime_UTR | 50.0% | |
| !! | GCTACAAGAGCATCAGGTGC+AGG | - | chr6_1:11135130-11135149 | None:intergenic | 55.0% |
| CCCAGCACCAATAACTGTGG+TGG | - | chr6_1:11135284-11135303 | None:intergenic | 55.0% | |
| GCCCGCTTGCGTCAAAAAGT+TGG | + | chr6_1:11135315-11135334 | Msa0875090:CDS | 55.0% | |
| ! | TTCACCCAGTTTGGGACGGA+AGG | - | chr6_1:11136470-11136489 | None:intergenic | 55.0% |
| AGATCCCCCCAGCAATGACA+AGG | - | chr6_1:11137167-11137186 | None:intergenic | 55.0% | |
| AGGATTCCTCACGGATGCGT+GGG | + | chr6_1:11137752-11137771 | Msa0875090:CDS | 55.0% | |
| CACCTGTTGCTCCAGAGAAC+TGG | - | chr6_1:11138134-11138153 | None:intergenic | 55.0% | |
| ATGTACGCCCAGTCCACCAA+TGG | - | chr6_1:11142668-11142687 | None:intergenic | 55.0% | |
| TGGGATGCCAAGACTCTTCC+CGG | + | chr6_1:11143196-11143215 | Msa0875090:intron | 55.0% | |
| ACGTAGGCTGTCATCAGCAC+AGG | - | chr6_1:11143266-11143285 | None:intergenic | 55.0% | |
| GAGGATTCCTCACGGATACG+TGG | + | chr6_1:11143829-11143848 | Msa0875090:intron | 55.0% | |
| GGATTCCTCACGGATACGTG+GGG | + | chr6_1:11143831-11143850 | Msa0875090:intron | 55.0% | |
| CACCTCAGAGTGATTGCAGC+TGG | - | chr6_1:11144258-11144277 | None:intergenic | 55.0% | |
| CGCAAGTCTGACGCCGTATA+TGG | + | chr6_1:11144650-11144669 | Msa0875090:three_prime_UTR | 55.0% | |
| ATGTGCGCCCAGTCCACCAA+TGG | - | chr6_1:11135773-11135792 | None:intergenic | 60.0% | |
| GAGGATTCCTCACGGATGCG+TGG | + | chr6_1:11137751-11137770 | Msa0875090:CDS | 60.0% | |
| GGATTCCTCACGGATGCGTG+GGG | + | chr6_1:11137753-11137772 | Msa0875090:CDS | 60.0% | |
| GGACTCAAGGGACGTGCTGT+TGG | + | chr6_1:11140561-11140580 | Msa0875090:intron | 60.0% | |
| CACAACCCCACGTATCCGTG+AGG | - | chr6_1:11143839-11143858 | None:intergenic | 60.0% | |
| CACAACCCCACGCATCCGTG+AGG | - | chr6_1:11137761-11137780 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6_1 | gene | 11134904 | 11144967 | 11134904 | ID=Msa0875090;Name=Msa0875090 |
| chr6_1 | mRNA | 11134904 | 11144967 | 11134904 | ID=Msa0875090-mRNA-1;Parent=Msa0875090;Name=Msa0875090-mRNA-1;_AED=0.33;_eAED=0.33;_QI=180|1|1|1|0.66|0.42|7|542|463 |
| chr6_1 | exon | 11134904 | 11134935 | 11134904 | ID=Msa0875090-mRNA-1:exon:3443;Parent=Msa0875090-mRNA-1 |
| chr6_1 | exon | 11134964 | 11135547 | 11134964 | ID=Msa0875090-mRNA-1:exon:3444;Parent=Msa0875090-mRNA-1 |
| chr6_1 | exon | 11135700 | 11135852 | 11135700 | ID=Msa0875090-mRNA-1:exon:3445;Parent=Msa0875090-mRNA-1 |
| chr6_1 | exon | 11137115 | 11137318 | 11137115 | ID=Msa0875090-mRNA-1:exon:3446;Parent=Msa0875090-mRNA-1 |
| chr6_1 | exon | 11137728 | 11138196 | 11137728 | ID=Msa0875090-mRNA-1:exon:3447;Parent=Msa0875090-mRNA-1 |
| chr6_1 | exon | 11139969 | 11140300 | 11139969 | ID=Msa0875090-mRNA-1:exon:3448;Parent=Msa0875090-mRNA-1 |
| chr6_1 | exon | 11144628 | 11144967 | 11144628 | ID=Msa0875090-mRNA-1:exon:3449;Parent=Msa0875090-mRNA-1 |
| chr6_1 | five_prime_UTR | 11134904 | 11134935 | 11134904 | ID=Msa0875090-mRNA-1:five_prime_utr;Parent=Msa0875090-mRNA-1 |
| chr6_1 | five_prime_UTR | 11134964 | 11135111 | 11134964 | ID=Msa0875090-mRNA-1:five_prime_utr;Parent=Msa0875090-mRNA-1 |
| chr6_1 | CDS | 11135112 | 11135547 | 11135112 | ID=Msa0875090-mRNA-1:cds;Parent=Msa0875090-mRNA-1 |
| chr6_1 | CDS | 11135700 | 11135852 | 11135700 | ID=Msa0875090-mRNA-1:cds;Parent=Msa0875090-mRNA-1 |
| chr6_1 | CDS | 11137115 | 11137318 | 11137115 | ID=Msa0875090-mRNA-1:cds;Parent=Msa0875090-mRNA-1 |
| chr6_1 | CDS | 11137728 | 11138196 | 11137728 | ID=Msa0875090-mRNA-1:cds;Parent=Msa0875090-mRNA-1 |
| chr6_1 | CDS | 11139969 | 11140098 | 11139969 | ID=Msa0875090-mRNA-1:cds;Parent=Msa0875090-mRNA-1 |
| chr6_1 | three_prime_UTR | 11140099 | 11140300 | 11140099 | ID=Msa0875090-mRNA-1:three_prime_utr;Parent=Msa0875090-mRNA-1 |
| chr6_1 | three_prime_UTR | 11144628 | 11144967 | 11144628 | ID=Msa0875090-mRNA-1:three_prime_utr;Parent=Msa0875090-mRNA-1 |
| Gene Sequence |
| Protein sequence |
