AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0313990


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0313990 MtrunA17_Chr2g0283911 95.168 683 32 1 1 683 1 682 0.0 1252
Msa0313990 MtrunA17_Chr8g0379141 44.093 474 183 18 1 466 2 401 1.80e-75 252
Msa0313990 MtrunA17_Chr8g0379141 49.206 126 53 2 568 682 401 526 2.20e-23 104
Msa0313990 MtrunA17_Chr4g0041221 37.015 335 174 14 1 320 108 420 1.54e-45 174
Msa0313990 MtrunA17_Chr2g0325871 27.864 323 169 9 1 319 7 269 2.00e-20 94.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0313990 AT1G29240.1 29.963 544 284 23 1 518 1 473 4.32e-37 147
Msa0313990 AT2G30990.4 33.033 333 166 13 1 318 8 298 4.84e-32 132
Msa0313990 AT2G30990.1 33.033 333 166 13 1 318 8 298 4.84e-32 132
Msa0313990 AT2G30990.5 33.033 333 166 13 1 318 8 298 4.84e-32 132
Msa0313990 AT2G30990.2 33.033 333 166 13 1 318 8 298 4.84e-32 132
Msa0313990 AT2G30990.3 29.217 332 150 12 1 318 8 268 2.12e-25 111
Msa0313990 AT2G34170.4 29.894 378 228 16 163 532 79 427 5.57e-15 78.6
Msa0313990 AT2G34170.6 29.894 378 228 16 163 532 79 427 5.57e-15 78.6
Msa0313990 AT2G34170.2 29.894 378 228 16 163 532 79 427 5.57e-15 78.6
Msa0313990 AT2G34170.1 29.894 378 228 16 163 532 79 427 5.57e-15 78.6
Msa0313990 AT2G34170.5 29.894 378 228 16 163 532 79 427 5.57e-15 78.6
Msa0313990 AT2G34170.3 29.894 378 228 16 163 532 79 427 5.57e-15 78.6

Find 153 sgRNAs with CRISPR-Local

Find 235 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATATACTAGTTGTTCAATTT+TGG 0.171140 2_4:+9504722 Msa0313990:five_prime_UTR
CAAGATTCAGAAGGCGATTT+TGG 0.175148 2_4:-9506978 None:intergenic
CTTCAAATTGCAAGGTTTAT+TGG 0.181795 2_4:-9506448 None:intergenic
CCTAAATTGTACCGATATTT+AGG 0.186347 2_4:+9503755 Msa0313990:five_prime_UTR
CCTAAATATCGGTACAATTT+AGG 0.229090 2_4:-9503755 None:intergenic
TGCTTCATCTTCATATTCTT+TGG 0.231607 2_4:-9506823 None:intergenic
TCAAACAGGTTTGCTTATTC+AGG 0.234374 2_4:+9506291 Msa0313990:CDS
TCCTGAATATGAACTTCTTA+TGG 0.254530 2_4:-9506520 None:intergenic
CTTCATTATGAGTATCAAAA+AGG 0.256909 2_4:-9507603 None:intergenic
CTTCTTATGGTTCCTTGGTT+TGG 0.266348 2_4:-9506507 None:intergenic
TATGAAATATTAAGTTCTTT+AGG 0.276345 2_4:+9506759 Msa0313990:CDS
CCATTACCTTTGCATCTTCC+AGG 0.280896 2_4:-9504953 None:intergenic
AGAAGAAAATTGAGAGTAGA+AGG 0.285969 2_4:+9505191 Msa0313990:CDS
GGCAATTCTACAACTTTATC+TGG 0.287056 2_4:+9506783 Msa0313990:CDS
AGATCTAATACTAGATCTTT+TGG 0.293809 2_4:-9505755 None:intergenic
TATTCAGGTGAGTTGCTTCC+AGG 0.295367 2_4:+9506306 Msa0313990:CDS
CGCCTTCTGAATCTTGGCTT+TGG 0.295509 2_4:+9506985 Msa0313990:CDS
GAATTCCTAACATGTAAATT+AGG 0.295957 2_4:-9505646 None:intergenic
TGGTATGAATTCCTAGCTTA+TGG 0.299673 2_4:+9507389 Msa0313990:three_prime_UTR
GTGACTTTACTAGCATGTTT+TGG 0.301554 2_4:+9507328 Msa0313990:three_prime_UTR
TTCTTTCCTTCTTGTGTCTC+AGG 0.305257 2_4:-9506252 None:intergenic
TGTTACCTAATTTACATGTT+AGG 0.307828 2_4:+9505641 Msa0313990:CDS
CAAAATCGCCTTCTGAATCT+TGG 0.309915 2_4:+9506979 Msa0313990:CDS
ATGTTTATGTGAAGCAAAAT+TGG 0.326100 2_4:-9504080 None:intergenic
AATGCATGAAAGAATTCTTA+AGG 0.332402 2_4:-9507028 None:intergenic
ACATGTAGAAGCTTTGGATT+TGG 0.334216 2_4:+9506716 Msa0313990:CDS
ACCATAAGAAGTTCATATTC+AGG 0.337841 2_4:+9506519 Msa0313990:CDS
TAACACAATTTGCTTCTTGT+TGG 0.338151 2_4:-9506925 None:intergenic
AACTTGGAAGCTAAGAAGTT+TGG 0.342081 2_4:+9505334 Msa0313990:CDS
CATAAAACATGTAGAAGCTT+TGG 0.346430 2_4:+9506710 Msa0313990:CDS
TCTTGACATTCACCGGTATA+CGG 0.347443 2_4:-9505544 None:intergenic
AAAAGCTGATTCCTCAAGAT+TGG 0.350894 2_4:-9507521 None:intergenic
ACCTTCTTTACAGCTGGAAT+TGG 0.356365 2_4:-9505784 None:intergenic
TCGTCGTTAACCCCTGTGGC+TGG 0.361778 2_4:+9505673 Msa0313990:CDS
GAATTCTTAAGGGAATTTAT+AGG 0.365661 2_4:-9507017 None:intergenic
AGAAACTATGACTGCAGAAT+TGG 0.367734 2_4:+9506638 Msa0313990:CDS
AAGTTCATATTCAGGAAGTT+TGG 0.370116 2_4:+9506527 Msa0313990:CDS
AAGCAAATTGTGTTAGCTAA+TGG 0.371518 2_4:+9506933 Msa0313990:CDS
GTGAATGAAGGGTTCTTAAC+AGG 0.372438 2_4:-9504998 None:intergenic
CGGTACAATTTAGGTGACTT+TGG 0.374962 2_4:-9503746 None:intergenic
CTGTTGCAGTGCCTTTCAAT+TGG 0.375311 2_4:+9504921 Msa0313990:CDS
ATGAACTTCTTATGGTTCCT+TGG 0.408592 2_4:-9506512 None:intergenic
TCTTTCATGCATTCAAATCA+AGG 0.415349 2_4:+9507038 Msa0313990:CDS
GATAATTCTGATAGTGTCTT+GGG 0.420826 2_4:+9505604 Msa0313990:CDS
CAGAAGAAGGCAAGGTAACT+TGG 0.421503 2_4:-9505711 None:intergenic
TTCTTCCTCTTGACATTCAC+CGG 0.422017 2_4:-9505551 None:intergenic
CAATTGAAAGGCACTGCAAC+AGG 0.422727 2_4:-9504920 None:intergenic
AGATTGTTGTCTACTTCTAC+AGG 0.427835 2_4:-9506379 None:intergenic
ATGCATGAAAGAATTCTTAA+GGG 0.429740 2_4:-9507027 None:intergenic
AGTGAATCTATTTGCAACAT+TGG 0.432778 2_4:-9505086 None:intergenic
TGTTGCAGTGCCTTTCAATT+GGG 0.433415 2_4:+9504922 Msa0313990:CDS
CAGGTAGACTCTCTCCCTTC+CGG 0.433558 2_4:+9506325 Msa0313990:CDS
CTTTCATCCTACTCATTCTA+CGG 0.433768 2_4:+9503934 Msa0313990:five_prime_UTR
AGAAGTTTAGCATGTGAAGA+AGG 0.438850 2_4:-9504032 None:intergenic
AGCAAAATTGGTTACATGAA+TGG 0.439698 2_4:-9504068 None:intergenic
CTTCATTCACTCCAATTCCT+AGG 0.444181 2_4:+9505011 Msa0313990:CDS
AACGGTTGGTTGTTAAATGA+TGG 0.447012 2_4:-9503957 None:intergenic
GATGTGACTCACACAATAAA+CGG 0.448558 2_4:-9503975 None:intergenic
TCTGATAGTGTCTTGGGTAA+AGG 0.452169 2_4:+9505610 Msa0313990:CDS
TGATAATTCTGATAGTGTCT+TGG 0.459416 2_4:+9505603 Msa0313990:CDS
TTCAATTGGGAGCATATACC+TGG 0.463873 2_4:+9504935 Msa0313990:CDS
ATCTTTCATCCCAAAAGAAA+AGG 0.466943 2_4:+9507477 Msa0313990:three_prime_UTR
CTTGCCTTCTTCTGCTTCTG+AGG 0.469469 2_4:+9505720 Msa0313990:CDS
AATTTGAAGTTCCACAGCTC+AGG 0.470701 2_4:+9506462 Msa0313990:CDS
TTGTGATAGAGAAAGAGAAA+AGG 0.473028 2_4:+9505156 Msa0313990:CDS
CGTTCAAGAGCAGCCGCTGC+CGG 0.475439 2_4:+9506348 Msa0313990:CDS
AATGAGTAGGATGAAAGAAA+AGG 0.475957 2_4:-9503928 None:intergenic
AGCAACTTTGTGCCGCGAAA+GGG 0.478616 2_4:-9506402 None:intergenic
GGTAAACCTTGTACAACATC+AGG 0.481724 2_4:+9507698 Msa0313990:three_prime_UTR
AGTGTCTTGGGTAAAGGTTG+TGG 0.482135 2_4:+9505616 Msa0313990:CDS
TCCAATTCCAGCTGTAAAGA+AGG 0.488744 2_4:+9505783 Msa0313990:CDS
TGTAAGTGGATTAGATAACT+TGG 0.489622 2_4:+9505318 Msa0313990:CDS
TGTAGTGTGAGTGGTGTAAG+TGG 0.490003 2_4:+9505304 Msa0313990:CDS
TTCATCCCAAAAGAAAAGGT+TGG 0.490476 2_4:+9507481 Msa0313990:three_prime_UTR
AAGTTCCACAGCTCAGGACT+AGG 0.492542 2_4:+9506468 Msa0313990:CDS
GATGGAGCAGTGAATCAAAC+AGG 0.494290 2_4:+9506277 Msa0313990:CDS
CTTTCATGCATTCAAATCAA+GGG 0.495053 2_4:+9507039 Msa0313990:CDS
CTGTGGAACTTCAAATTGCA+AGG 0.495828 2_4:-9506456 None:intergenic
GAAATATGAAATTCTCATGT+TGG 0.496138 2_4:+9507677 Msa0313990:three_prime_UTR
CAGCGGCTGCTCTTGAACGC+CGG 0.500453 2_4:-9506344 None:intergenic
AGGCTTGGGAAGCAATTCAT+AGG 0.501472 2_4:+9506202 Msa0313990:intron
TGCCACACAGCCATTGGTAA+AGG 0.501688 2_4:+9505060 Msa0313990:CDS
GGCTGCTCTTGAACGCCGGA+AGG 0.503308 2_4:-9506340 None:intergenic
CTAGGAATTGGAGTGAATGA+AGG 0.503346 2_4:-9505010 None:intergenic
CGGAAGGGAGAGAGTCTACC+TGG 0.503457 2_4:-9506324 None:intergenic
ATTAGTCCTGATGTTGTACA+AGG 0.505244 2_4:-9507704 None:intergenic
CCTGGAAGATGCAAAGGTAA+TGG 0.505247 2_4:+9504953 Msa0313990:CDS
GAGCAACTTTGTGCCGCGAA+AGG 0.509560 2_4:-9506403 None:intergenic
TCTTAAGGGAATTTATAGGC+AGG 0.510829 2_4:-9507013 None:intergenic
TATAGTATAGTCTATAGAAA+AGG 0.513869 2_4:-9503997 None:intergenic
TGGTCATGTTCGCTATTCTC+AGG 0.524240 2_4:+9507151 Msa0313990:CDS
CACAAGAAGGAAAGAAGAGA+TGG 0.527187 2_4:+9506259 Msa0313990:CDS
GGGTTCTTAACAGGAATTTG+AGG 0.537121 2_4:-9504989 None:intergenic
TAAATCTGCCACACAGCCAT+TGG 0.537480 2_4:+9505054 Msa0313990:CDS
CGTCGTTAACCCCTGTGGCT+GGG 0.541305 2_4:+9505674 Msa0313990:CDS
GTTGCACTGACACGAGTTCA+CGG 0.542673 2_4:-9506869 None:intergenic
ACCTAGAGATGTTAACAAGT+TGG 0.543738 2_4:+9505483 Msa0313990:CDS
TCAGGACTAGGAAAGATTCA+AGG 0.544117 2_4:+9506480 Msa0313990:CDS
TTCTTTGATTCTGTTAACGA+AGG 0.544378 2_4:-9504827 None:intergenic
AGACAACAATCTCCCTTTCG+CGG 0.549357 2_4:+9506390 Msa0313990:CDS
AAGCTAAAATTCCATAAGCT+AGG 0.549681 2_4:-9507400 None:intergenic
TGCTGTTCCACTAATACAGA+TGG 0.550161 2_4:-9505460 None:intergenic
ACTTTAAGCTTGTGATTGAG+AGG 0.550574 2_4:+9504683 Msa0313990:five_prime_UTR
TTTGGCAATGGTGGTTGAAG+TGG 0.552216 2_4:-9506960 None:intergenic
AACAAATCGAAGTCTTTCAC+CGG 0.552406 2_4:+9505115 Msa0313990:CDS
CTCAGAAGCAGAAGAAGGCA+AGG 0.554216 2_4:-9505719 None:intergenic
CTTTAAGCTTGTGATTGAGA+GGG 0.554442 2_4:+9504684 Msa0313990:five_prime_UTR
GAGGAAGAAAGTGAAGATGA+AGG 0.554931 2_4:+9505565 Msa0313990:CDS
ACATTGGATTCCTTTACCAA+TGG 0.558672 2_4:-9505070 None:intergenic
ACAACCTCAGAAGCAGAAGA+AGG 0.563800 2_4:-9505724 None:intergenic
ATATTCAGGAAGTTTGGCAA+TGG 0.563810 2_4:+9506533 Msa0313990:CDS
ACTTCTACAGGGAGATATAC+CGG 0.565280 2_4:-9506367 None:intergenic
CTTAAGGGAATTTATAGGCA+GGG 0.568652 2_4:-9507012 None:intergenic
ATAGACTATACTATAGCTGC+TGG 0.568738 2_4:+9504005 Msa0313990:five_prime_UTR
GAAATATTAAGTTCTTTAGG+TGG 0.570557 2_4:+9506762 Msa0313990:CDS
TTACAAATCAGAAATGTCGT+TGG 0.571299 2_4:+9504883 Msa0313990:CDS
GCTGCTCTTGAACGCCGGAA+GGG 0.571777 2_4:-9506339 None:intergenic
ACTGATATTATACCGTATAC+CGG 0.572231 2_4:+9505532 Msa0313990:CDS
ACCAACTTGTTAACATCTCT+AGG 0.572917 2_4:-9505484 None:intergenic
TCAGAATGCAAAGAAACCAT+TGG 0.573111 2_4:+9505507 Msa0313990:CDS
ATTAATATCATCCAATCTTG+AGG 0.575175 2_4:+9507510 Msa0313990:three_prime_UTR
TCATAGGAACAAGTCAAGTA+CGG 0.579635 2_4:+9506218 Msa0313990:CDS
TTTCGCGGCACAAAGTTGCT+CGG 0.581061 2_4:+9506405 Msa0313990:CDS
TTCATGCAGGAACTACAGGC+TGG 0.582455 2_4:+9507268 Msa0313990:intron
AAAACTTCAAATTTGCAGCA+TGG 0.585819 2_4:+9507131 Msa0313990:CDS
CATATACCTGGAAGATGCAA+AGG 0.587455 2_4:+9504947 Msa0313990:CDS
TCTTTGAACTGTAGTGTGAG+TGG 0.589323 2_4:+9505295 Msa0313990:CDS
ATCATCAAGCAATGTCAAGT+GGG 0.592931 2_4:+9507097 Msa0313990:CDS
TATCATCAAGCAATGTCAAG+TGG 0.593140 2_4:+9507096 Msa0313990:CDS
GGTATATGCTCCCAATTGAA+AGG 0.603809 2_4:-9504932 None:intergenic
CAGAATTGGACAAAAGAAGA+GGG 0.608851 2_4:+9506652 Msa0313990:CDS
TAGGAATTGGAGTGAATGAA+GGG 0.609667 2_4:-9505009 None:intergenic
GGAAGATGCAAAGGTAATGG+TGG 0.613591 2_4:+9504956 Msa0313990:CDS
TGACTCACACAATAAACGGT+TGG 0.614738 2_4:-9503971 None:intergenic
CGCCAAAGCCAAGATTCAGA+AGG 0.617248 2_4:-9506987 None:intergenic
TTTCGTCTCACTGACATGAG+TGG 0.617379 2_4:-9504791 None:intergenic
GCAGAATTGGACAAAAGAAG+AGG 0.618216 2_4:+9506651 Msa0313990:CDS
AGGAATTCATACCATATGCA+TGG 0.620202 2_4:-9507380 None:intergenic
ACAGGGAGATATACCGGCAG+CGG 0.622172 2_4:-9506361 None:intergenic
GGTATAATATCAGTTACCAA+TGG 0.624162 2_4:-9505523 None:intergenic
ATTTGTAACTTGCAAGAGTG+TGG 0.632226 2_4:-9504868 None:intergenic
TAGATACTGAGTTATTCAAG+AGG 0.633034 2_4:+9504111 Msa0313990:five_prime_UTR
TTCCTTTACCAATGGCTGTG+TGG 0.635764 2_4:-9505062 None:intergenic
GCATCACCTGAGACACAAGA+AGG 0.635937 2_4:+9506246 Msa0313990:CDS
ATTGTCGTCGTTAACCCCTG+TGG 0.643621 2_4:+9505669 Msa0313990:CDS
GAACAAGAAAGATGTCTGAG+AGG 0.647218 2_4:+9504750 Msa0313990:exon
TCTTTCCTAGTCCTGAGCTG+TGG 0.653082 2_4:-9506473 None:intergenic
TGACTTGTGAAACTCTGACT+CGG 0.659313 2_4:-9503795 None:intergenic
ATTCAAGGAGTTCCAAACCA+AGG 0.669302 2_4:+9506495 Msa0313990:CDS
GATTGTTGTCTACTTCTACA+GGG 0.670105 2_4:-9506378 None:intergenic
GTATACCGGTGAATGTCAAG+AGG 0.679585 2_4:+9505546 Msa0313990:CDS
ATGATGGCCGTAGAATGAGT+AGG 0.682669 2_4:-9503941 None:intergenic
GAAGTCTTTCACCGGCAACG+CGG 0.766833 2_4:+9505123 Msa0313990:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTTTTAGTATTATATCTT+TGG + chr2_4:9504163-9504182 Msa0313990:intron 10.0%
!!! TATTTTTTATTCATTGATTG+TGG + chr2_4:9504244-9504263 Msa0313990:intron 15.0%
!! AATATTATATAGTTTCTTTC+AGG + chr2_4:9504304-9504323 Msa0313990:intron 15.0%
!! TATGAAATATTAAGTTCTTT+AGG + chr2_4:9506759-9506778 Msa0313990:CDS 15.0%
!! TATAGTATAGTCTATAGAAA+AGG - chr2_4:9504000-9504019 None:intergenic 20.0%
!!! TTTTAGTATTATATCTTTGG+TGG + chr2_4:9504166-9504185 Msa0313990:intron 20.0%
!! TTTAGTATTATATCTTTGGT+GGG + chr2_4:9504167-9504186 Msa0313990:intron 20.0%
!! TGAAAATCTGAAAAATACAA+AGG - chr2_4:9504589-9504608 None:intergenic 20.0%
!!! ATTTTTCAGATTTTCATGAT+TGG + chr2_4:9504593-9504612 Msa0313990:intron 20.0%
!!! ATATACTAGTTGTTCAATTT+TGG + chr2_4:9504722-9504741 Msa0313990:five_prime_UTR 20.0%
!!! TTTTTTGAAGAATATTGAGA+AGG - chr2_4:9505439-9505458 None:intergenic 20.0%
!!! AATTTTAGCTTTTATAGCAT+TGG + chr2_4:9507412-9507431 Msa0313990:three_prime_UTR 20.0%
!! TTCATTATGAGTATCAAAAA+GGG - chr2_4:9507605-9507624 None:intergenic 20.0%
! ATGTTTATGTGAAGCAAAAT+TGG - chr2_4:9504083-9504102 None:intergenic 25.0%
!! TATCCATTTAGCTTAAATCA+TGG + chr2_4:9504350-9504369 Msa0313990:intron 25.0%
! TATCACAAGTTGTTAAACTT+TGG - chr2_4:9504396-9504415 None:intergenic 25.0%
! GTTTAATTCTTCTCTTGTTA+TGG + chr2_4:9504440-9504459 Msa0313990:intron 25.0%
! ATACAAAGGAATTTAAGAAC+TGG - chr2_4:9504575-9504594 None:intergenic 25.0%
!!! ATACCTGATTTTTTAAGCAT+TGG + chr2_4:9504628-9504647 Msa0313990:five_prime_UTR 25.0%
!! TAGTTGTTCAATTTTGGATT+TGG + chr2_4:9504728-9504747 Msa0313990:five_prime_UTR 25.0%
! TGTTACCTAATTTACATGTT+AGG + chr2_4:9505641-9505660 Msa0313990:CDS 25.0%
! GAATTCCTAACATGTAAATT+AGG - chr2_4:9505649-9505668 None:intergenic 25.0%
!! AGATCTAATACTAGATCTTT+TGG - chr2_4:9505758-9505777 None:intergenic 25.0%
!!! ACAATTGATTTTGACATGTT+TGG + chr2_4:9505875-9505894 Msa0313990:intron 25.0%
! TAAGATAGAATCAATTCTGA+AGG - chr2_4:9505926-9505945 None:intergenic 25.0%
!!! AAAATCTACTTTTGTCACAA+CGG + chr2_4:9506081-9506100 Msa0313990:intron 25.0%
!! AAAGGATTAAGGATTTGTTT+GGG - chr2_4:9506108-9506127 None:intergenic 25.0%
!! AAAAGGATTAAGGATTTGTT+TGG - chr2_4:9506109-9506128 None:intergenic 25.0%
! TGATCAACAAAAAAGGATTA+AGG - chr2_4:9506119-9506138 None:intergenic 25.0%
! GAAATATTAAGTTCTTTAGG+TGG + chr2_4:9506762-9506781 Msa0313990:CDS 25.0%
! GAATTCTTAAGGGAATTTAT+AGG - chr2_4:9507020-9507039 None:intergenic 25.0%
! ATGCATGAAAGAATTCTTAA+GGG - chr2_4:9507030-9507049 None:intergenic 25.0%
! AATGCATGAAAGAATTCTTA+AGG - chr2_4:9507031-9507050 None:intergenic 25.0%
! TATGGACAAAGGAATTAAAA+AGG - chr2_4:9507180-9507199 None:intergenic 25.0%
! GTCTTATATAGGCAAAATTA+TGG - chr2_4:9507198-9507217 None:intergenic 25.0%
! ATTAATATCATCCAATCTTG+AGG + chr2_4:9507510-9507529 Msa0313990:three_prime_UTR 25.0%
! CTTCATTATGAGTATCAAAA+AGG - chr2_4:9507606-9507625 None:intergenic 25.0%
!! CTTTTTGATACTCATAATGA+AGG + chr2_4:9507604-9507623 Msa0313990:three_prime_UTR 25.0%
! GAAATATGAAATTCTCATGT+TGG + chr2_4:9507677-9507696 Msa0313990:three_prime_UTR 25.0%
CCTAAATATCGGTACAATTT+AGG - chr2_4:9503758-9503777 None:intergenic 30.0%
! CCTAAATTGTACCGATATTT+AGG + chr2_4:9503755-9503774 Msa0313990:five_prime_UTR 30.0%
!! CTCTTTTTAGGCCTAAATAT+CGG - chr2_4:9503769-9503788 None:intergenic 30.0%
AAAAGGCAATAAAAAGCTGA+GGG - chr2_4:9503914-9503933 None:intergenic 30.0%
AATGAGTAGGATGAAAGAAA+AGG - chr2_4:9503931-9503950 None:intergenic 30.0%
AGCAAAATTGGTTACATGAA+TGG - chr2_4:9504071-9504090 None:intergenic 30.0%
TAGATACTGAGTTATTCAAG+AGG + chr2_4:9504111-9504130 Msa0313990:five_prime_UTR 30.0%
! CATCACATGCAAAATTTTCA+TGG - chr2_4:9504194-9504213 None:intergenic 30.0%
TCTTTCAGGAGAGAAAATAT+AGG + chr2_4:9504318-9504337 Msa0313990:intron 30.0%
! AGAGAAAATATAGGCTTTTG+AGG + chr2_4:9504327-9504346 Msa0313990:intron 30.0%
AAGCCATGATTTAAGCTAAA+TGG - chr2_4:9504356-9504375 None:intergenic 30.0%
TTCTTTGATTCTGTTAACGA+AGG - chr2_4:9504830-9504849 None:intergenic 30.0%
TTACAAATCAGAAATGTCGT+TGG + chr2_4:9504883-9504902 Msa0313990:CDS 30.0%
! AGATTTAACAGATTTTCCAG+GGG - chr2_4:9505041-9505060 None:intergenic 30.0%
! CAGATTTAACAGATTTTCCA+GGG - chr2_4:9505042-9505061 None:intergenic 30.0%
AGTGAATCTATTTGCAACAT+TGG - chr2_4:9505089-9505108 None:intergenic 30.0%
TTGTGATAGAGAAAGAGAAA+AGG + chr2_4:9505156-9505175 Msa0313990:CDS 30.0%
AGAAGAAAATTGAGAGTAGA+AGG + chr2_4:9505191-9505210 Msa0313990:CDS 30.0%
!! TGTAAGTGGATTAGATAACT+TGG + chr2_4:9505318-9505337 Msa0313990:CDS 30.0%
! TTGTATTGTCATAGCTTTTG+CGG - chr2_4:9505416-9505435 None:intergenic 30.0%
AAAAAAGCCATCTGTATTAG+TGG + chr2_4:9505453-9505472 Msa0313990:CDS 30.0%
GGTATAATATCAGTTACCAA+TGG - chr2_4:9505526-9505545 None:intergenic 30.0%
ACTGATATTATACCGTATAC+CGG + chr2_4:9505532-9505551 Msa0313990:CDS 30.0%
! TGATAATTCTGATAGTGTCT+TGG + chr2_4:9505603-9505622 Msa0313990:CDS 30.0%
! GATAATTCTGATAGTGTCTT+GGG + chr2_4:9505604-9505623 Msa0313990:CDS 30.0%
! CTAATACTAGATCTTTTGGT+AGG - chr2_4:9505754-9505773 None:intergenic 30.0%
!!! TTTTTTACCTTCTTTACAGC+TGG - chr2_4:9505793-9505812 None:intergenic 30.0%
! ACACCTCTTGTAACAATTTT+TGG - chr2_4:9505855-9505874 None:intergenic 30.0%
ATGTTTGGATATTCTCAAGT+AGG + chr2_4:9505890-9505909 Msa0313990:intron 30.0%
AAAGCTAGAATTTGTAGCTT+TGG + chr2_4:9505945-9505964 Msa0313990:intron 30.0%
TGGATACTTTCATGTAAAAG+TGG - chr2_4:9506011-9506030 None:intergenic 30.0%
AATGTAAAGTGATGTACGTT+TGG - chr2_4:9506031-9506050 None:intergenic 30.0%
! AAGGATTAAGGATTTGTTTG+GGG - chr2_4:9506107-9506126 None:intergenic 30.0%
AGGATGTTGATCAACAAAAA+AGG - chr2_4:9506126-9506145 None:intergenic 30.0%
CTTCAAATTGCAAGGTTTAT+TGG - chr2_4:9506451-9506470 None:intergenic 30.0%
ACCATAAGAAGTTCATATTC+AGG + chr2_4:9506519-9506538 Msa0313990:CDS 30.0%
TCCTGAATATGAACTTCTTA+TGG - chr2_4:9506523-9506542 None:intergenic 30.0%
AAGTTCATATTCAGGAAGTT+TGG + chr2_4:9506527-9506546 Msa0313990:CDS 30.0%
GTTCTGTAGATATCAAAAAG+AGG + chr2_4:9506613-9506632 Msa0313990:CDS 30.0%
CATAAAACATGTAGAAGCTT+TGG + chr2_4:9506710-9506729 Msa0313990:CDS 30.0%
TTTGGAAGAAAAAGTCACAT+TGG + chr2_4:9506734-9506753 Msa0313990:CDS 30.0%
TGCTTCATCTTCATATTCTT+TGG - chr2_4:9506826-9506845 None:intergenic 30.0%
! TAACACAATTTGCTTCTTGT+TGG - chr2_4:9506928-9506947 None:intergenic 30.0%
AAGCAAATTGTGTTAGCTAA+TGG + chr2_4:9506933-9506952 Msa0313990:CDS 30.0%
TCTTTCATGCATTCAAATCA+AGG + chr2_4:9507038-9507057 Msa0313990:CDS 30.0%
CTTTCATGCATTCAAATCAA+GGG + chr2_4:9507039-9507058 Msa0313990:CDS 30.0%
AAAACTTCAAATTTGCAGCA+TGG + chr2_4:9507131-9507150 Msa0313990:CDS 30.0%
ATAGGCAAAATTATGGACAA+AGG - chr2_4:9507191-9507210 None:intergenic 30.0%
!! GAGTTGATGTAGTCTTATAT+AGG - chr2_4:9507209-9507228 None:intergenic 30.0%
!! TTCACATTTACTTTTCATGC+AGG + chr2_4:9507255-9507274 Msa0313990:intron 30.0%
AAACAAGGAGACAAAAAACT+TGG - chr2_4:9507355-9507374 None:intergenic 30.0%
ATATGCATGGTGAAAAAACA+AGG - chr2_4:9507370-9507389 None:intergenic 30.0%
!!! TTGTTTTTTCACCATGCATA+TGG + chr2_4:9507369-9507388 Msa0313990:three_prime_UTR 30.0%
AAGCTAAAATTCCATAAGCT+AGG - chr2_4:9507403-9507422 None:intergenic 30.0%
ATCTTTCATCCCAAAAGAAA+AGG + chr2_4:9507477-9507496 Msa0313990:three_prime_UTR 30.0%
! TGAATCCAACCTTTTCTTTT+GGG - chr2_4:9507489-9507508 None:intergenic 30.0%
! ATGAATCCAACCTTTTCTTT+TGG - chr2_4:9507490-9507509 None:intergenic 30.0%
CGATATTTAGGCCTAAAAAG+AGG + chr2_4:9503767-9503786 Msa0313990:five_prime_UTR 35.0%
GAAAAGGCAATAAAAAGCTG+AGG - chr2_4:9503915-9503934 None:intergenic 35.0%
CTTTCATCCTACTCATTCTA+CGG + chr2_4:9503934-9503953 Msa0313990:five_prime_UTR 35.0%
! AACGGTTGGTTGTTAAATGA+TGG - chr2_4:9503960-9503979 None:intergenic 35.0%
GATGTGACTCACACAATAAA+CGG - chr2_4:9503978-9503997 None:intergenic 35.0%
ATAGACTATACTATAGCTGC+TGG + chr2_4:9504005-9504024 Msa0313990:five_prime_UTR 35.0%
AGAAGTTTAGCATGTGAAGA+AGG - chr2_4:9504035-9504054 None:intergenic 35.0%
ATGTTCATGAACATGCTCAA+TGG + chr2_4:9504211-9504230 Msa0313990:intron 35.0%
GCACCAATGCTTAAAAAATC+AGG - chr2_4:9504634-9504653 None:intergenic 35.0%
ACTTTAAGCTTGTGATTGAG+AGG + chr2_4:9504683-9504702 Msa0313990:five_prime_UTR 35.0%
CTTTAAGCTTGTGATTGAGA+GGG + chr2_4:9504684-9504703 Msa0313990:five_prime_UTR 35.0%
! ATTTGTAACTTGCAAGAGTG+TGG - chr2_4:9504871-9504890 None:intergenic 35.0%
TAGGAATTGGAGTGAATGAA+GGG - chr2_4:9505012-9505031 None:intergenic 35.0%
! GATTTAACAGATTTTCCAGG+GGG - chr2_4:9505040-9505059 None:intergenic 35.0%
! GCAGATTTAACAGATTTTCC+AGG - chr2_4:9505043-9505062 None:intergenic 35.0%
ACATTGGATTCCTTTACCAA+TGG - chr2_4:9505073-9505092 None:intergenic 35.0%
AACAAATCGAAGTCTTTCAC+CGG + chr2_4:9505115-9505134 Msa0313990:CDS 35.0%
!! GAGTAGAAGGTTTTGTGTTA+AGG + chr2_4:9505204-9505223 Msa0313990:CDS 35.0%
AACTTGGAAGCTAAGAAGTT+TGG + chr2_4:9505334-9505353 Msa0313990:CDS 35.0%
ACCTAGAGATGTTAACAAGT+TGG + chr2_4:9505483-9505502 Msa0313990:CDS 35.0%
!! ACCAACTTGTTAACATCTCT+AGG - chr2_4:9505487-9505506 None:intergenic 35.0%
TCAGAATGCAAAGAAACCAT+TGG + chr2_4:9505507-9505526 Msa0313990:CDS 35.0%
! TGTATGTTTGATTTCGCATG+TGG + chr2_4:9505824-9505843 Msa0313990:intron 35.0%
GAGCCAAAAATTGTTACAAG+AGG + chr2_4:9505849-9505868 Msa0313990:intron 35.0%
CGAAAACATGTTCATTCATG+AGG - chr2_4:9506146-9506165 None:intergenic 35.0%
! TGATGATGAATCTTTGATGC+AGG + chr2_4:9506182-9506201 Msa0313990:intron 35.0%
TCATAGGAACAAGTCAAGTA+CGG + chr2_4:9506218-9506237 Msa0313990:CDS 35.0%
! TCAAACAGGTTTGCTTATTC+AGG + chr2_4:9506291-9506310 Msa0313990:CDS 35.0%
GATTGTTGTCTACTTCTACA+GGG - chr2_4:9506381-9506400 None:intergenic 35.0%
AGATTGTTGTCTACTTCTAC+AGG - chr2_4:9506382-9506401 None:intergenic 35.0%
ATGAACTTCTTATGGTTCCT+TGG - chr2_4:9506515-9506534 None:intergenic 35.0%
ATATTCAGGAAGTTTGGCAA+TGG + chr2_4:9506533-9506552 Msa0313990:CDS 35.0%
AGAAACTATGACTGCAGAAT+TGG + chr2_4:9506638-9506657 Msa0313990:CDS 35.0%
CAGAATTGGACAAAAGAAGA+GGG + chr2_4:9506652-9506671 Msa0313990:CDS 35.0%
!! ACATGTAGAAGCTTTGGATT+TGG + chr2_4:9506716-9506735 Msa0313990:CDS 35.0%
GGCAATTCTACAACTTTATC+TGG + chr2_4:9506783-9506802 Msa0313990:CDS 35.0%
! TCAGAAAAAGTCTTTTGCAC+TGG - chr2_4:9506894-9506913 None:intergenic 35.0%
CTTAAGGGAATTTATAGGCA+GGG - chr2_4:9507015-9507034 None:intergenic 35.0%
TCTTAAGGGAATTTATAGGC+AGG - chr2_4:9507016-9507035 None:intergenic 35.0%
TATCATCAAGCAATGTCAAG+TGG + chr2_4:9507096-9507115 Msa0313990:CDS 35.0%
ATCATCAAGCAATGTCAAGT+GGG + chr2_4:9507097-9507116 Msa0313990:CDS 35.0%
AGACTACATCAACTCAACTA+TGG + chr2_4:9507214-9507233 Msa0313990:intron 35.0%
! GTGACTTTACTAGCATGTTT+TGG + chr2_4:9507328-9507347 Msa0313990:three_prime_UTR 35.0%
AGGAATTCATACCATATGCA+TGG - chr2_4:9507383-9507402 None:intergenic 35.0%
TGGTATGAATTCCTAGCTTA+TGG + chr2_4:9507389-9507408 Msa0313990:three_prime_UTR 35.0%
TTCATCCCAAAAGAAAAGGT+TGG + chr2_4:9507481-9507500 Msa0313990:three_prime_UTR 35.0%
! AAAAGCTGATTCCTCAAGAT+TGG - chr2_4:9507524-9507543 None:intergenic 35.0%
ATTAGTCCTGATGTTGTACA+AGG - chr2_4:9507707-9507726 None:intergenic 35.0%
CGGTACAATTTAGGTGACTT+TGG - chr2_4:9503749-9503768 None:intergenic 40.0%
! ACTCGGTATTGCCTCTTTTT+AGG - chr2_4:9503781-9503800 None:intergenic 40.0%
! TGACTTGTGAAACTCTGACT+CGG - chr2_4:9503798-9503817 None:intergenic 40.0%
TGACTCACACAATAAACGGT+TGG - chr2_4:9503974-9503993 None:intergenic 40.0%
GAACAAGAAAGATGTCTGAG+AGG + chr2_4:9504750-9504769 Msa0313990:exon 40.0%
TGTTGCAGTGCCTTTCAATT+GGG + chr2_4:9504922-9504941 Msa0313990:CDS 40.0%
GGTATATGCTCCCAATTGAA+AGG - chr2_4:9504935-9504954 None:intergenic 40.0%
! TTCAATTGGGAGCATATACC+TGG + chr2_4:9504935-9504954 Msa0313990:CDS 40.0%
CATATACCTGGAAGATGCAA+AGG + chr2_4:9504947-9504966 Msa0313990:CDS 40.0%
GGGTTCTTAACAGGAATTTG+AGG - chr2_4:9504992-9505011 None:intergenic 40.0%
GTGAATGAAGGGTTCTTAAC+AGG - chr2_4:9505001-9505020 None:intergenic 40.0%
CTAGGAATTGGAGTGAATGA+AGG - chr2_4:9505013-9505032 None:intergenic 40.0%
CTTCATTCACTCCAATTCCT+AGG + chr2_4:9505011-9505030 Msa0313990:CDS 40.0%
!!! ATCTATTTTAACCGCGTTGC+CGG - chr2_4:9505137-9505156 None:intergenic 40.0%
TCTTTGAACTGTAGTGTGAG+TGG + chr2_4:9505295-9505314 Msa0313990:CDS 40.0%
TGCTGTTCCACTAATACAGA+TGG - chr2_4:9505463-9505482 None:intergenic 40.0%
TCTTGACATTCACCGGTATA+CGG - chr2_4:9505547-9505566 None:intergenic 40.0%
TTCTTCCTCTTGACATTCAC+CGG - chr2_4:9505554-9505573 None:intergenic 40.0%
GAGGAAGAAAGTGAAGATGA+AGG + chr2_4:9505565-9505584 Msa0313990:CDS 40.0%
! TCTGATAGTGTCTTGGGTAA+AGG + chr2_4:9505610-9505629 Msa0313990:CDS 40.0%
TCCAATTCCAGCTGTAAAGA+AGG + chr2_4:9505783-9505802 Msa0313990:CDS 40.0%
ACCTTCTTTACAGCTGGAAT+TGG - chr2_4:9505787-9505806 None:intergenic 40.0%
ATGAATCTTTGATGCAGGCT+TGG + chr2_4:9506187-9506206 Msa0313990:intron 40.0%
TGAATCTTTGATGCAGGCTT+GGG + chr2_4:9506188-9506207 Msa0313990:intron 40.0%
TTCTTTCCTTCTTGTGTCTC+AGG - chr2_4:9506255-9506274 None:intergenic 40.0%
CACAAGAAGGAAAGAAGAGA+TGG + chr2_4:9506259-9506278 Msa0313990:CDS 40.0%
ACTTCTACAGGGAGATATAC+CGG - chr2_4:9506370-9506389 None:intergenic 40.0%
CTGTGGAACTTCAAATTGCA+AGG - chr2_4:9506459-9506478 None:intergenic 40.0%
! AATTTGAAGTTCCACAGCTC+AGG + chr2_4:9506462-9506481 Msa0313990:CDS 40.0%
TCAGGACTAGGAAAGATTCA+AGG + chr2_4:9506480-9506499 Msa0313990:CDS 40.0%
ATTCAAGGAGTTCCAAACCA+AGG + chr2_4:9506495-9506514 Msa0313990:CDS 40.0%
CTTCTTATGGTTCCTTGGTT+TGG - chr2_4:9506510-9506529 None:intergenic 40.0%
GCAGAATTGGACAAAAGAAG+AGG + chr2_4:9506651-9506670 Msa0313990:CDS 40.0%
! CAAGATTCAGAAGGCGATTT+TGG - chr2_4:9506981-9507000 None:intergenic 40.0%
CAAAATCGCCTTCTGAATCT+TGG + chr2_4:9506979-9506998 Msa0313990:CDS 40.0%
! ACTTTTCATGCAGGAACTAC+AGG + chr2_4:9507264-9507283 Msa0313990:intron 40.0%
GGTAAACCTTGTACAACATC+AGG + chr2_4:9507698-9507717 Msa0313990:three_prime_UTR 40.0%
ATGATGGCCGTAGAATGAGT+AGG - chr2_4:9503944-9503963 None:intergenic 45.0%
TTTCGTCTCACTGACATGAG+TGG - chr2_4:9504794-9504813 None:intergenic 45.0%
!! CAATTGAAAGGCACTGCAAC+AGG - chr2_4:9504923-9504942 None:intergenic 45.0%
CTGTTGCAGTGCCTTTCAAT+TGG + chr2_4:9504921-9504940 Msa0313990:CDS 45.0%
CCATTACCTTTGCATCTTCC+AGG - chr2_4:9504956-9504975 None:intergenic 45.0%
CCTGGAAGATGCAAAGGTAA+TGG + chr2_4:9504953-9504972 Msa0313990:CDS 45.0%
! GGAAGATGCAAAGGTAATGG+TGG + chr2_4:9504956-9504975 Msa0313990:CDS 45.0%
TAAATCTGCCACACAGCCAT+TGG + chr2_4:9505054-9505073 Msa0313990:CDS 45.0%
TTCCTTTACCAATGGCTGTG+TGG - chr2_4:9505065-9505084 None:intergenic 45.0%
TGTAGTGTGAGTGGTGTAAG+TGG + chr2_4:9505304-9505323 Msa0313990:CDS 45.0%
! ATTGTCATAGCTTTTGCGGC+TGG - chr2_4:9505412-9505431 None:intergenic 45.0%
GTATACCGGTGAATGTCAAG+AGG + chr2_4:9505546-9505565 Msa0313990:CDS 45.0%
AGTGTCTTGGGTAAAGGTTG+TGG + chr2_4:9505616-9505635 Msa0313990:CDS 45.0%
! TCATTTTCATCCCAGCCACA+GGG - chr2_4:9505687-9505706 None:intergenic 45.0%
! TTCATTTTCATCCCAGCCAC+AGG - chr2_4:9505688-9505707 None:intergenic 45.0%
CAGAAGAAGGCAAGGTAACT+TGG - chr2_4:9505714-9505733 None:intergenic 45.0%
ACAACCTCAGAAGCAGAAGA+AGG - chr2_4:9505727-9505746 None:intergenic 45.0%
AGGCTTGGGAAGCAATTCAT+AGG + chr2_4:9506202-9506221 Msa0313990:intron 45.0%
GATGGAGCAGTGAATCAAAC+AGG + chr2_4:9506277-9506296 Msa0313990:CDS 45.0%
TATTCAGGTGAGTTGCTTCC+AGG + chr2_4:9506306-9506325 Msa0313990:CDS 45.0%
AGACAACAATCTCCCTTTCG+CGG + chr2_4:9506390-9506409 Msa0313990:CDS 45.0%
TTTGGCAATGGTGGTTGAAG+TGG - chr2_4:9506963-9506982 None:intergenic 45.0%
!! TCAGAAGGCGATTTTGGCAA+TGG - chr2_4:9506975-9506994 None:intergenic 45.0%
TGGTCATGTTCGCTATTCTC+AGG + chr2_4:9507151-9507170 Msa0313990:CDS 45.0%
TGCCACACAGCCATTGGTAA+AGG + chr2_4:9505060-9505079 Msa0313990:CDS 50.0%
! CTTTTGCGGCTGGCAAGAAA+CGG - chr2_4:9505402-9505421 None:intergenic 50.0%
ATTGTCGTCGTTAACCCCTG+TGG + chr2_4:9505669-9505688 Msa0313990:CDS 50.0%
! CATTTTCATCCCAGCCACAG+GGG - chr2_4:9505686-9505705 None:intergenic 50.0%
CTCAGAAGCAGAAGAAGGCA+AGG - chr2_4:9505722-9505741 None:intergenic 50.0%
CTTGCCTTCTTCTGCTTCTG+AGG + chr2_4:9505720-9505739 Msa0313990:CDS 50.0%
GCATCACCTGAGACACAAGA+AGG + chr2_4:9506246-9506265 Msa0313990:CDS 50.0%
AGCAACTTTGTGCCGCGAAA+GGG - chr2_4:9506405-9506424 None:intergenic 50.0%
TTTCGCGGCACAAAGTTGCT+CGG + chr2_4:9506405-9506424 Msa0313990:CDS 50.0%
AAGTTCCACAGCTCAGGACT+AGG + chr2_4:9506468-9506487 Msa0313990:CDS 50.0%
TCTTTCCTAGTCCTGAGCTG+TGG - chr2_4:9506476-9506495 None:intergenic 50.0%
! GTTGCACTGACACGAGTTCA+CGG - chr2_4:9506872-9506891 None:intergenic 50.0%
!! GAAGGCGATTTTGGCAATGG+TGG - chr2_4:9506972-9506991 None:intergenic 50.0%
CGCCTTCTGAATCTTGGCTT+TGG + chr2_4:9506985-9507004 Msa0313990:CDS 50.0%
CGCCAAAGCCAAGATTCAGA+AGG - chr2_4:9506990-9507009 None:intergenic 50.0%
TTCATGCAGGAACTACAGGC+TGG + chr2_4:9507268-9507287 Msa0313990:intron 50.0%
! GATTTTCCAGGGGGAAGCCT+AGG - chr2_4:9505031-9505050 None:intergenic 55.0%
GAAGTCTTTCACCGGCAACG+CGG + chr2_4:9505123-9505142 Msa0313990:CDS 55.0%
CAGGTAGACTCTCTCCCTTC+CGG + chr2_4:9506325-9506344 Msa0313990:CDS 55.0%
ACAGGGAGATATACCGGCAG+CGG - chr2_4:9506364-9506383 None:intergenic 55.0%
GAGCAACTTTGTGCCGCGAA+AGG - chr2_4:9506406-9506425 None:intergenic 55.0%
CCAGGGGGAAGCCTAGGAAT+TGG - chr2_4:9505025-9505044 None:intergenic 60.0%
CCAATTCCTAGGCTTCCCCC+TGG + chr2_4:9505022-9505041 Msa0313990:CDS 60.0%
TCGTCGTTAACCCCTGTGGC+TGG + chr2_4:9505673-9505692 Msa0313990:CDS 60.0%
CGTCGTTAACCCCTGTGGCT+GGG + chr2_4:9505674-9505693 Msa0313990:CDS 60.0%
CGGAAGGGAGAGAGTCTACC+TGG - chr2_4:9506327-9506346 None:intergenic 60.0%
GCTGCTCTTGAACGCCGGAA+GGG - chr2_4:9506342-9506361 None:intergenic 60.0%
GGCTGCTCTTGAACGCCGGA+AGG - chr2_4:9506343-9506362 None:intergenic 65.0%
CAGCGGCTGCTCTTGAACGC+CGG - chr2_4:9506347-9506366 None:intergenic 65.0%
CGTTCAAGAGCAGCCGCTGC+CGG + chr2_4:9506348-9506367 Msa0313990:CDS 65.0%
Chromosome Type Strat End Strand Name
chr2_4 gene 9503742 9507738 9503742 ID=Msa0313990;Name=Msa0313990
chr2_4 mRNA 9503742 9507738 9503742 ID=Msa0313990-mRNA-1;Parent=Msa0313990;Name=Msa0313990-mRNA-1;_AED=0.01;_eAED=0.01;_QI=550|1|1|1|0.66|0.5|4|423|683
chr2_4 exon 9503742 9504132 9503742 ID=Msa0313990-mRNA-1:exon:3659;Parent=Msa0313990-mRNA-1
chr2_4 exon 9504602 9505804 9504602 ID=Msa0313990-mRNA-1:exon:3660;Parent=Msa0313990-mRNA-1
chr2_4 exon 9506204 9507172 9506204 ID=Msa0313990-mRNA-1:exon:3661;Parent=Msa0313990-mRNA-1
chr2_4 exon 9507277 9507738 9507277 ID=Msa0313990-mRNA-1:exon:3662;Parent=Msa0313990-mRNA-1
chr2_4 five_prime_UTR 9503742 9504132 9503742 ID=Msa0313990-mRNA-1:five_prime_utr;Parent=Msa0313990-mRNA-1
chr2_4 five_prime_UTR 9504602 9504760 9504602 ID=Msa0313990-mRNA-1:five_prime_utr;Parent=Msa0313990-mRNA-1
chr2_4 CDS 9504761 9505804 9504761 ID=Msa0313990-mRNA-1:cds;Parent=Msa0313990-mRNA-1
chr2_4 CDS 9506204 9507172 9506204 ID=Msa0313990-mRNA-1:cds;Parent=Msa0313990-mRNA-1
chr2_4 CDS 9507277 9507315 9507277 ID=Msa0313990-mRNA-1:cds;Parent=Msa0313990-mRNA-1
chr2_4 three_prime_UTR 9507316 9507738 9507316 ID=Msa0313990-mRNA-1:three_prime_utr;Parent=Msa0313990-mRNA-1
Gene Sequence

>Msa0313990

ATGTCTGAGAGGAAATTGAACATCAATGCTCCACTCATGTCAGTGAGACGAAATTCAGCTACATCGCCTTCGTTAACAGAATCAAAGAAGAAGATATTAGAGAAACGCCACACTCTTGCAAGTTACAAATCAGAAATGTCGTTGGATCAAGTAACAGAACCTGTTGCAGTGCCTTTCAATTGGGAGCATATACCTGGAAGATGCAAAGGTAATGGTGGATCTGAAGTACCTCAAATTCCTGTTAAGAACCCTTCATTCACTCCAATTCCTAGGCTTCCCCCTGGAAAATCTGTTAAATCTGCCACACAGCCATTGGTAAAGGAATCCAATGTTGCAAATAGATTCACTTCTTCAAACAAATCGAAGTCTTTCACCGGCAACGCGGTTAAAATAGATTGTGATAGAGAAAGAGAAAAGGAAAAAGAAACTGAGAAGAAAATTGAGAGTAGAAGGTTTTGTGTTAAGGAAGTGAAGAATGATGATGATGCTTATTCAGATGCAGTTGAGTCACTGTCACATTTAACAGAATCATTCTCTTTGAACTGTAGTGTGAGTGGTGTAAGTGGATTAGATAACTTGGAAGCTAAGAAGTTTGGAACATTTTCTACAGATCAACAAACAAGAGACTTCATGATGAACCGTTTCTTGCCAGCCGCAAAAGCTATGACAATACAACCTTCTCAATATTCTTCAAAAAAGCCATCTGTATTAGTGGAACAGCAACCTAGAGATGTTAACAAGTTGGTTCAGAATGCAAAGAAACCATTGGTAACTGATATTATACCGTATACCGGTGAATGTCAAGAGGAAGAAAGTGAAGATGAAGGCGATGTTTGTGACAATGATAATTCTGATAGTGTCTTGGGTAAAGGTTGTGGTTTGTTACCTAATTTACATGTTAGGAATTCATTGTCGTCGTTAACCCCTGTGGCTGGGATGAAAATGAAGAACCAAGTTACCTTGCCTTCTTCTGCTTCTGAGGTTGTCAAACCTACCAAAAGATCTAGTATTAGATCTTTTAGTCCAATTCCAGCTGTAAAGAAGGCTTGGGAAGCAATTCATAGGAACAAGTCAAGTACGGCAGCTGCATCACCTGAGACACAAGAAGGAAAGAAGAGATGGAGCAGTGAATCAAACAGGTTTGCTTATTCAGGTGAGTTGCTTCCAGGTAGACTCTCTCCCTTCCGGCGTTCAAGAGCAGCCGCTGCCGGTATATCTCCCTGTAGAAGTAGACAACAATCTCCCTTTCGCGGCACAAAGTTGCTCGGTGATTCTAATGATGCTGAAACCAATAAACCTTGCAATTTGAAGTTCCACAGCTCAGGACTAGGAAAGATTCAAGGAGTTCCAAACCAAGGAACCATAAGAAGTTCATATTCAGGAAGTTTGGCAATGGAAAAGACATTGTACATAGATAGTTCAAGTACTGTCAAATTATCATCTTCAAATTTAAGTTCTGTAGATATCAAAAAGAGGATAGAAACTATGACTGCAGAATTGGACAAAAGAAGAGGGAAAGAACGTAATTCTAGCATAGAAACTTCTCAAAACATAAAACATGTAGAAGCTTTGGATTTGGAAGAAAAAGTCACATTGGATTATGAAATATTAAGTTCTTTAGGTGGCAATTCTACAACTTTATCTGGTATGCTACATCATATAGCCAAAGAATATGAAGATGAAGCAATGAAAAATGATGAAGATATTAACCGTGAACTCGTGTCAGTGCAACCAGTGCAAAAGACTTTTTCTGAAGACTCAGATACCAACAAGAAGCAAATTGTGTTAGCTAATGGTTCTCCACTTCAACCACCATTGCCAAAATCGCCTTCTGAATCTTGGCTTTGGCGTGCCCTGCCTATAAATTCCCTTAAGAATTCTTTCATGCATTCAAATCAAGGGACTCAATCTCATGCTAAAAGAAATGATTCTAATATATCATCAAGCAATGTCAAGTGGGAAACAATAGTGAAAACTTCAAATTTGCAGCATGGTCATGTTCGCTATTCTCAGGAACTACAGGCTGGTAAATCGCAGCATTCAAAATATTAG

Protein sequence

>Msa0313990

MSERKLNINAPLMSVRRNSATSPSLTESKKKILEKRHTLASYKSEMSLDQVTEPVAVPFNWEHIPGRCKGNGGSEVPQIPVKNPSFTPIPRLPPGKSVKSATQPLVKESNVANRFTSSNKSKSFTGNAVKIDCDREREKEKETEKKIESRRFCVKEVKNDDDAYSDAVESLSHLTESFSLNCSVSGVSGLDNLEAKKFGTFSTDQQTRDFMMNRFLPAAKAMTIQPSQYSSKKPSVLVEQQPRDVNKLVQNAKKPLVTDIIPYTGECQEEESEDEGDVCDNDNSDSVLGKGCGLLPNLHVRNSLSSLTPVAGMKMKNQVTLPSSASEVVKPTKRSSIRSFSPIPAVKKAWEAIHRNKSSTAAASPETQEGKKRWSSESNRFAYSGELLPGRLSPFRRSRAAAAGISPCRSRQQSPFRGTKLLGDSNDAETNKPCNLKFHSSGLGKIQGVPNQGTIRSSYSGSLAMEKTLYIDSSSTVKLSSSNLSSVDIKKRIETMTAELDKRRGKERNSSIETSQNIKHVEALDLEEKVTLDYEILSSLGGNSTTLSGMLHHIAKEYEDEAMKNDEDINRELVSVQPVQKTFSEDSDTNKKQIVLANGSPLQPPLPKSPSESWLWRALPINSLKNSFMHSNQGTQSHAKRNDSNISSSNVKWETIVKTSNLQHGHVRYSQELQAGKSQHSKY*