Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0983540 | KEH16865.1 | 99.298 | 285 | 2 | 0 | 1 | 285 | 14 | 298 | 0.0 | 579 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0983540 | sp|P93286|CCMFC_ARATH | 84.462 | 251 | 31 | 4 | 1 | 247 | 14 | 260 | 2.52e-120 | 354 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0983540 | A0A072TTM0 | 99.298 | 285 | 2 | 0 | 1 | 285 | 14 | 298 | 0.0 | 579 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0026430 | Msa0983540 | -0.820144 | 8.012428e-53 | -8.615850e-47 |
| Msa0065950 | Msa0983540 | -0.802108 | 6.559664e-49 | -8.615850e-47 |
| Msa0069500 | Msa0983540 | 0.817093 | 3.942519e-52 | -8.615850e-47 |
| Msa0657750 | Msa0983540 | -0.801342 | 9.419444e-49 | -8.615850e-47 |
| Msa0697990 | Msa0983540 | 0.847298 | 1.263490e-59 | -8.615850e-47 |
| Msa0709160 | Msa0983540 | -0.820056 | 8.390550e-53 | -8.615850e-47 |
| Msa0721280 | Msa0983540 | -0.809967 | 1.456339e-50 | -8.615850e-47 |
| Msa0763890 | Msa0983540 | -0.801104 | 1.053742e-48 | -8.615850e-47 |
| Msa0159770 | Msa0983540 | -0.807950 | 3.934488e-50 | -8.615850e-47 |
| Msa0220440 | Msa0983540 | -0.830583 | 2.706342e-55 | -8.615850e-47 |
| Msa0983130 | Msa0983540 | 0.815483 | 9.033577e-52 | -8.615850e-47 |
| Msa0983170 | Msa0983540 | 0.950552 | 1.300410e-108 | -8.615850e-47 |
| Msa0983180 | Msa0983540 | 0.891601 | 3.422602e-74 | -8.615850e-47 |
| Msa0983190 | Msa0983540 | 0.919679 | 3.328926e-87 | -8.615850e-47 |
| Msa0983210 | Msa0983540 | 0.855899 | 4.629088e-62 | -8.615850e-47 |
| Msa0983220 | Msa0983540 | 0.837802 | 4.192660e-57 | -8.615850e-47 |
| Msa0983230 | Msa0983540 | 0.811158 | 8.051086e-51 | -8.615850e-47 |
| Msa0983260 | Msa0983540 | 0.844356 | 7.952492e-59 | -8.615850e-47 |
| Msa0983300 | Msa0983540 | 0.882964 | 6.693479e-71 | -8.615850e-47 |
| Msa0983320 | Msa0983540 | 0.859453 | 4.093299e-63 | -8.615850e-47 |
| Msa0983350 | Msa0983540 | 0.859612 | 3.666381e-63 | -8.615850e-47 |
| Msa0983360 | Msa0983540 | 0.805084 | 1.583719e-49 | -8.615850e-47 |
| Msa0983460 | Msa0983540 | 0.886594 | 2.985587e-72 | -8.615850e-47 |
| Msa0983490 | Msa0983540 | 0.848581 | 5.596584e-60 | -8.615850e-47 |
| Msa0983500 | Msa0983540 | 0.877049 | 8.580735e-69 | -8.615850e-47 |
| Msa0983520 | Msa0983540 | 0.909901 | 3.410636e-82 | -8.615850e-47 |
| Msa0983530 | Msa0983540 | 0.887046 | 2.011884e-72 | -8.615850e-47 |
| Msa0983540 | Msa0983550 | 0.828499 | 8.688755e-55 | -8.615850e-47 |
| Msa0983540 | Msa1137570 | -0.800887 | 1.166930e-48 | -8.615850e-47 |
| Msa0983540 | Msa1193290 | -0.816383 | 5.688543e-52 | -8.615850e-47 |
| Msa0983540 | Msa1220870 | -0.804560 | 2.037581e-49 | -8.615850e-47 |
| Msa0983540 | Msa1224580 | 0.808520 | 2.974651e-50 | -8.615850e-47 |
| Msa0983540 | Msa1228620 | 0.870469 | 1.425394e-66 | -8.615850e-47 |
| Msa0983540 | Msa1263290 | 0.815949 | 7.112235e-52 | -8.615850e-47 |
| Msa0983540 | Msa1333730 | -0.803567 | 3.277476e-49 | -8.615850e-47 |
| Msa0983540 | Msa1353470 | -0.800045 | 1.732746e-48 | -8.615850e-47 |
| Msa0983540 | Msa1357890 | -0.809861 | 1.535122e-50 | -8.615850e-47 |
| Msa0983540 | Msa1391970 | 0.862464 | 4.976715e-64 | -8.615850e-47 |
| Msa0983540 | Msa1392010 | 0.861670 | 8.715466e-64 | -8.615850e-47 |
| Msa0983540 | Msa1392030 | 0.872644 | 2.715382e-67 | -8.615850e-47 |
| Msa0983540 | Msa1392120 | 0.887062 | 1.984178e-72 | -8.615850e-47 |
| Msa0983540 | Msa1392160 | 0.892897 | 1.038657e-74 | -8.615850e-47 |
| Msa0983540 | Msa1398090 | -0.809460 | 1.871917e-50 | -8.615850e-47 |
| Msa0983540 | Msa1407600 | -0.801178 | 1.017781e-48 | -8.615850e-47 |
| Msa0983540 | Msa1453870 | 0.808362 | 3.214645e-50 | -8.615850e-47 |
| Msa0983540 | Msa1466540 | -0.806117 | 9.613678e-50 | -8.615850e-47 |
| Msa0249100 | Msa0983540 | -0.800394 | 1.471004e-48 | -8.615850e-47 |
| Msa0253200 | Msa0983540 | -0.812747 | 3.628865e-51 | -8.615850e-47 |
| Msa0261720 | Msa0983540 | -0.818483 | 1.914409e-52 | -8.615850e-47 |
| Msa0271530 | Msa0983540 | -0.805634 | 1.214473e-49 | -8.615850e-47 |
| Msa0292030 | Msa0983540 | -0.812688 | 3.737561e-51 | -8.615850e-47 |
| Msa0299580 | Msa0983540 | -0.812444 | 4.227335e-51 | -8.615850e-47 |
| Msa0319170 | Msa0983540 | -0.806361 | 8.540002e-50 | -8.615850e-47 |
| Msa0326110 | Msa0983540 | -0.802738 | 4.865577e-49 | -8.615850e-47 |
| Msa0337060 | Msa0983540 | -0.820457 | 6.790118e-53 | -8.615850e-47 |
| Msa0872440 | Msa0983540 | -0.805003 | 1.645986e-49 | -8.615850e-47 |
| Msa0908820 | Msa0983540 | 0.811453 | 6.948576e-51 | -8.615850e-47 |
| Msa0908830 | Msa0983540 | 0.959484 | 1.713109e-117 | -8.615850e-47 |
| Msa0908840 | Msa0983540 | 0.891332 | 4.377446e-74 | -8.615850e-47 |
| Msa0908850 | Msa0983540 | 0.909049 | 8.745635e-82 | -8.615850e-47 |
| Msa0908870 | Msa0983540 | 0.846649 | 1.901604e-59 | -8.615850e-47 |
| Msa0908920 | Msa0983540 | 0.870939 | 9.987779e-67 | -8.615850e-47 |
| Msa0908930 | Msa0983540 | 0.834442 | 2.990950e-56 | -8.615850e-47 |
| Msa0920000 | Msa0983540 | 0.801899 | 7.241585e-49 | -8.615850e-47 |
| Msa0920060 | Msa0983540 | 0.858621 | 7.267153e-63 | -8.615850e-47 |
| Msa0933100 | Msa0983540 | -0.808347 | 3.239335e-50 | -8.615850e-47 |
| Msa0933450 | Msa0983540 | -0.802237 | 6.170338e-49 | -8.615850e-47 |
| Msa0944900 | Msa0983540 | 0.875199 | 3.719170e-68 | -8.615850e-47 |
| Msa0944920 | Msa0983540 | 0.917102 | 7.990827e-86 | -8.615850e-47 |
| Msa0944930 | Msa0983540 | 0.887209 | 1.743919e-72 | -8.615850e-47 |
| Msa0944940 | Msa0983540 | 0.980857 | 3.383381e-151 | -8.615850e-47 |
| Msa0944950 | Msa0983540 | 0.811165 | 8.023289e-51 | -8.615850e-47 |
| Msa0944990 | Msa0983540 | 0.843763 | 1.147036e-58 | -8.615850e-47 |
| Msa0970990 | Msa0983540 | -0.807942 | 3.950937e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0983540 | MtrunA17_MTg0491351 | 100.000 | 285 | 0 | 0 | 1 | 285 | 14 | 298 | 0.0 | 577 |
| Msa0983540 | MtrunA17_Chr6g0457311 | 99.197 | 249 | 2 | 0 | 1 | 249 | 14 | 262 | 0.0 | 506 |
| Msa0983540 | MtrunA17_Chr5g0421701 | 100.000 | 94 | 0 | 0 | 1 | 94 | 14 | 107 | 3.78e-60 | 186 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0983540 | ATMG00180.1 | 86.056 | 251 | 27 | 4 | 1 | 247 | 14 | 260 | 1.22e-124 | 363 |
| Msa0983540 | AT2G07815.1 | 92.063 | 63 | 5 | 0 | 1 | 63 | 186 | 248 | 1.99e-31 | 118 |
Find 98 sgRNAs with CRISPR-Local
Find 252 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTTCGACCCTTCTTTCTAAA+TGG | 0.147379 | 6_4:-26628846 | None:intergenic |
| AAGATGAATATTTCACATTT+TGG | 0.158170 | 6_4:+26629027 | Msa0983540:CDS |
| ATTCTATTACCAGACATAAT+TGG | 0.200005 | 6_4:+26628550 | Msa0983540:CDS |
| GAAAGAAGGGTCGAAGGTTT+TGG | 0.227935 | 6_4:+26628853 | Msa0983540:CDS |
| TATCCCTTCATTCCCTCTTT+TGG | 0.232096 | 6_4:+26628450 | Msa0983540:CDS |
| ATTATAGTCCCATTGGAAAA+AGG | 0.254767 | 6_4:-26628418 | None:intergenic |
| CCCACGCCTCCTATTTGTTC+GGG | 0.312445 | 6_4:+26629115 | Msa0983540:CDS |
| GCCCACGCCTCCTATTTGTT+CGG | 0.316442 | 6_4:+26629114 | Msa0983540:CDS |
| TAGGGTTAGGCCTAAGTCTT+TGG | 0.319027 | 6_4:-26628774 | None:intergenic |
| AGAGCTTCAAGCCCGATTTC+AGG | 0.325181 | 6_4:-26628940 | None:intergenic |
| TGTGAAATATTCATCTTCAT+TGG | 0.340034 | 6_4:-26629021 | None:intergenic |
| CGTTGTTGCTCATTCCCGTT+AGG | 0.367528 | 6_4:-26628793 | None:intergenic |
| GTGCCACCTGAACCTGAAAT+CGG | 0.371160 | 6_4:+26628928 | Msa0983540:CDS |
| TTCGACCCTTCTTTCTAAAT+GGG | 0.377200 | 6_4:-26628845 | None:intergenic |
| TCAAGCCCGATTTCAGGTTC+AGG | 0.383654 | 6_4:-26628934 | None:intergenic |
| TTCTATTACCAGACATAATT+GGG | 0.392242 | 6_4:+26628551 | Msa0983540:CDS |
| ATTATGTCTGGTAATAGAAT+AGG | 0.394739 | 6_4:-26628547 | None:intergenic |
| CATGGAGCGTATGAATTTCC+TGG | 0.395551 | 6_4:-26628485 | None:intergenic |
| CAGCACCCTTACTATTGAAA+TGG | 0.410333 | 6_4:+26628365 | Msa0983540:CDS |
| TCGTCGGGTGGTGCTTGTGT+GGG | 0.410402 | 6_4:+26628901 | Msa0983540:CDS |
| GACGAACCATTTCAATAGTA+AGG | 0.419006 | 6_4:-26628371 | None:intergenic |
| GACTTAGGCCTAACCCTAAC+GGG | 0.420338 | 6_4:+26628779 | Msa0983540:CDS |
| GCCTCCTATTTGTTCGGGGC+GGG | 0.426566 | 6_4:+26629120 | Msa0983540:CDS |
| TGCTCATTCCCGTTAGGGTT+AGG | 0.432567 | 6_4:-26628787 | None:intergenic |
| CAGCTGTCGGCTCGTTGGTA+AGG | 0.438588 | 6_4:-26628965 | None:intergenic |
| GGCGTTTCCAGCTCTAGTTT+CGG | 0.439316 | 6_4:-26628584 | None:intergenic |
| AATGACAAGATGGGGTGCTC+CGG | 0.443575 | 6_4:+26628817 | Msa0983540:CDS |
| GCGTGAACTCTGACTCGATC+CGG | 0.445171 | 6_4:+26629145 | Msa0983540:CDS |
| TTCGTCGGGTGGTGCTTGTG+TGG | 0.447162 | 6_4:+26628900 | Msa0983540:CDS |
| GGGAATGAAGGGATAAGAAT+AGG | 0.452088 | 6_4:-26628442 | None:intergenic |
| GGAGTGTGCATCTGTATGTT+GGG | 0.452607 | 6_4:+26629048 | Msa0983540:CDS |
| AAATAGGAGGCGTGGGCCAC+AGG | 0.457252 | 6_4:-26629108 | None:intergenic |
| AGCGTGAGCGGGCGCGGAGA+AGG | 0.461302 | 6_4:+26628746 | Msa0983540:CDS |
| TAGACCAAAAGAGGGAATGA+AGG | 0.462783 | 6_4:-26628454 | None:intergenic |
| TGGAGTGTGCATCTGTATGT+TGG | 0.464038 | 6_4:+26629047 | Msa0983540:CDS |
| TTATGTCTGGTAATAGAATA+GGG | 0.466280 | 6_4:-26628546 | None:intergenic |
| CGTCGGGTGGTGCTTGTGTG+GGG | 0.474449 | 6_4:+26628902 | Msa0983540:CDS |
| GTTGTTGCTCATTCCCGTTA+GGG | 0.478561 | 6_4:-26628792 | None:intergenic |
| GAGCTTCTCCCAATTATGTC+TGG | 0.479434 | 6_4:-26628559 | None:intergenic |
| ATAAGAAGGAAATGAAGAAC+GGG | 0.482634 | 6_4:-26628622 | None:intergenic |
| ATGACAAGATGGGGTGCTCC+GGG | 0.484900 | 6_4:+26628818 | Msa0983540:CDS |
| AATAGGAATTATAGTCCCAT+TGG | 0.486797 | 6_4:-26628425 | None:intergenic |
| TAGGTCAGCAAAGCGTGAGC+GGG | 0.488590 | 6_4:+26628735 | Msa0983540:CDS |
| GTCGGGTGGTGCTTGTGTGG+GGG | 0.489593 | 6_4:+26628903 | Msa0983540:CDS |
| TGCCACCTGAACCTGAAATC+GGG | 0.498655 | 6_4:+26628929 | Msa0983540:CDS |
| TATGGTCGTGCCTCGTGGCA+CGG | 0.499749 | 6_4:+26628342 | None:intergenic |
| TTTCCTTCTTATCGAATCCA+AGG | 0.506357 | 6_4:+26628633 | Msa0983540:CDS |
| TCCTATTTGTTCGGGGCGGG+CGG | 0.509665 | 6_4:+26629123 | Msa0983540:CDS |
| CAGCGGCGGGATTGAATACC+CGG | 0.509879 | 6_4:-26629164 | None:intergenic |
| GAATGTAGATAGACCAAAAG+AGG | 0.511343 | 6_4:-26628463 | None:intergenic |
| CAGGAAATTCATACGCTCCA+TGG | 0.512722 | 6_4:+26628486 | Msa0983540:CDS |
| TCGGGTGGTGCTTGTGTGGG+GGG | 0.515078 | 6_4:+26628904 | Msa0983540:CDS |
| CAAGCACCACCCGACGAAGG+GGG | 0.520307 | 6_4:-26628895 | None:intergenic |
| CACAAGCACCACCCGACGAA+GGG | 0.520704 | 6_4:-26628897 | None:intergenic |
| TGTTCTTCTGTCGTGCGACC+CGG | 0.520759 | 6_4:+26629071 | Msa0983540:CDS |
| TCGACCCTTCTTTCTAAATG+GGG | 0.525145 | 6_4:-26628844 | None:intergenic |
| AGCTCATCCGAAACTAGAGC+TGG | 0.527296 | 6_4:+26628577 | Msa0983540:CDS |
| AAGCACCACCCGACGAAGGG+GGG | 0.538997 | 6_4:-26628894 | None:intergenic |
| GATAAGAAGGAAATGAAGAA+CGG | 0.546073 | 6_4:-26628623 | None:intergenic |
| CCCCGAACAAATAGGAGGCG+TGG | 0.547237 | 6_4:-26629116 | None:intergenic |
| CGCCTCCTATTTGTTCGGGG+CGG | 0.549996 | 6_4:+26629119 | Msa0983540:CDS |
| GAAGGATACACCAAAGACTT+AGG | 0.550018 | 6_4:+26628764 | Msa0983540:CDS |
| CGACCCTTCTTTCTAAATGG+GGG | 0.551750 | 6_4:-26628843 | None:intergenic |
| GCAACAACGAAATGACAAGA+TGG | 0.554660 | 6_4:+26628807 | Msa0983540:CDS |
| TTCCTTCTTATCGAATCCAA+GGG | 0.555052 | 6_4:+26628634 | Msa0983540:CDS |
| AGACCAAAAGAGGGAATGAA+GGG | 0.556885 | 6_4:-26628453 | None:intergenic |
| CGTGAACTCTGACTCGATCC+GGG | 0.560154 | 6_4:+26629146 | Msa0983540:CDS |
| GCCATCAGCTGTCGGCTCGT+TGG | 0.560398 | 6_4:-26628970 | None:intergenic |
| CAACAACGAAATGACAAGAT+GGG | 0.561008 | 6_4:+26628808 | Msa0983540:CDS |
| CCCGAACAAATAGGAGGCGT+GGG | 0.562967 | 6_4:-26629115 | None:intergenic |
| TCTTCTCTTTACCACGCGAT+AGG | 0.563452 | 6_4:+26628716 | Msa0983540:CDS |
| AGCCGACAGCTGATGGCTGT+TGG | 0.570681 | 6_4:+26628976 | Msa0983540:CDS |
| ACCAACGAGCCGACAGCTGA+TGG | 0.571630 | 6_4:+26628969 | Msa0983540:CDS |
| ACAAGCACCACCCGACGAAG+GGG | 0.579385 | 6_4:-26628896 | None:intergenic |
| CATTTAGAAAGAAGGGTCGA+AGG | 0.579824 | 6_4:+26628847 | Msa0983540:CDS |
| CAACTGAGCATCTCAGCGGC+GGG | 0.582580 | 6_4:-26629177 | None:intergenic |
| AGCCCGATTTCAGGTTCAGG+TGG | 0.584035 | 6_4:-26628931 | None:intergenic |
| ACACAAGCACCACCCGACGA+AGG | 0.587385 | 6_4:-26628898 | None:intergenic |
| ATAGGTCAGCAAAGCGTGAG+CGG | 0.592191 | 6_4:+26628734 | Msa0983540:CDS |
| AACGGGAACGAAACGAAATG+AGG | 0.592429 | 6_4:-26628605 | None:intergenic |
| AGACTTAGGCCTAACCCTAA+CGG | 0.593764 | 6_4:+26628778 | Msa0983540:CDS |
| GACCAACAGCCATCAGCTGT+CGG | 0.598703 | 6_4:-26628978 | None:intergenic |
| GTCAGTAGAGATGTTCCCAC+AGG | 0.600549 | 6_4:+26628391 | Msa0983540:CDS |
| AAATTCATACGCTCCATGGA+CGG | 0.604092 | 6_4:+26628490 | Msa0983540:CDS |
| TCAACTGAGCATCTCAGCGG+CGG | 0.604364 | 6_4:-26629178 | None:intergenic |
| GCCCGCCCCGAACAAATAGG+AGG | 0.605187 | 6_4:-26629121 | None:intergenic |
| CGCTTTGCTGACCTATCGCG+TGG | 0.606381 | 6_4:-26628727 | None:intergenic |
| ACGAACCATTTCAATAGTAA+GGG | 0.622019 | 6_4:-26628370 | None:intergenic |
| TCATATTTAGAATCTTTCTG+CGG | 0.622913 | 6_4:+26628664 | Msa0983540:CDS |
| AACAACGAAATGACAAGATG+GGG | 0.646716 | 6_4:+26628809 | Msa0983540:CDS |
| AAGGGTGCTGCCGTGCCACG+AGG | 0.653393 | 6_4:-26628352 | None:intergenic |
| GGCGGCTTATGTGCGACCTG+TGG | 0.655333 | 6_4:+26629092 | Msa0983540:CDS |
| AATGTAGATAGACCAAAAGA+GGG | 0.661451 | 6_4:-26628462 | None:intergenic |
| TCCTTCTTATCGAATCCAAG+GGG | 0.669734 | 6_4:+26628635 | Msa0983540:CDS |
| CCTTCTTATCGAATCCAAGG+GGG | 0.687346 | 6_4:+26628636 | Msa0983540:CDS |
| TCTTCTGTCGTGCGACCCGG+CGG | 0.715894 | 6_4:+26629074 | Msa0983540:CDS |
| GAGTCAACTGAGCATCTCAG+CGG | 0.749566 | 6_4:-26629181 | None:intergenic |
| TGTCTGGTAATAGAATAGGG+CGG | 0.798485 | 6_4:-26628543 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAGATGAATATTTCACATTT+TGG | + | chr6_4:26629027-26629046 | Msa0983540:CDS | 20.0% |
| !!! | AAGATGAATATTTCACATTT+TGG | + | chr6_4:26629027-26629046 | Msa0983540:CDS | 20.0% |
| ! | TTATGTCTGGTAATAGAATA+GGG | - | chr6_4:26628549-26628568 | None:intergenic | 25.0% |
| ! | ATTATGTCTGGTAATAGAAT+AGG | - | chr6_4:26628550-26628569 | None:intergenic | 25.0% |
| ! | ATTCTATTACCAGACATAAT+TGG | + | chr6_4:26628550-26628569 | Msa0983540:CDS | 25.0% |
| ! | TTCTATTACCAGACATAATT+GGG | + | chr6_4:26628551-26628570 | Msa0983540:CDS | 25.0% |
| !! | TCATATTTAGAATCTTTCTG+CGG | + | chr6_4:26628664-26628683 | Msa0983540:CDS | 25.0% |
| ! | TGTGAAATATTCATCTTCAT+TGG | - | chr6_4:26629024-26629043 | None:intergenic | 25.0% |
| ! | TTATGTCTGGTAATAGAATA+GGG | - | chr6_4:26628549-26628568 | None:intergenic | 25.0% |
| ! | ATTATGTCTGGTAATAGAAT+AGG | - | chr6_4:26628550-26628569 | None:intergenic | 25.0% |
| ! | ATTCTATTACCAGACATAAT+TGG | + | chr6_4:26628550-26628569 | Msa0983540:CDS | 25.0% |
| ! | TTCTATTACCAGACATAATT+GGG | + | chr6_4:26628551-26628570 | Msa0983540:CDS | 25.0% |
| !! | TCATATTTAGAATCTTTCTG+CGG | + | chr6_4:26628664-26628683 | Msa0983540:CDS | 25.0% |
| ! | TGTGAAATATTCATCTTCAT+TGG | - | chr6_4:26629024-26629043 | None:intergenic | 25.0% |
| ACGAACCATTTCAATAGTAA+GGG | - | chr6_4:26628373-26628392 | None:intergenic | 30.0% | |
| TTATAGTCCCATTGGAAAAA+GGG | - | chr6_4:26628420-26628439 | None:intergenic | 30.0% | |
| ATTATAGTCCCATTGGAAAA+AGG | - | chr6_4:26628421-26628440 | None:intergenic | 30.0% | |
| AATAGGAATTATAGTCCCAT+TGG | - | chr6_4:26628428-26628447 | None:intergenic | 30.0% | |
| AATGTAGATAGACCAAAAGA+GGG | - | chr6_4:26628465-26628484 | None:intergenic | 30.0% | |
| ATAAGAAGGAAATGAAGAAC+GGG | - | chr6_4:26628625-26628644 | None:intergenic | 30.0% | |
| GATAAGAAGGAAATGAAGAA+CGG | - | chr6_4:26628626-26628645 | None:intergenic | 30.0% | |
| ACGAACCATTTCAATAGTAA+GGG | - | chr6_4:26628373-26628392 | None:intergenic | 30.0% | |
| TTATAGTCCCATTGGAAAAA+GGG | - | chr6_4:26628420-26628439 | None:intergenic | 30.0% | |
| ATTATAGTCCCATTGGAAAA+AGG | - | chr6_4:26628421-26628440 | None:intergenic | 30.0% | |
| AATAGGAATTATAGTCCCAT+TGG | - | chr6_4:26628428-26628447 | None:intergenic | 30.0% | |
| AATGTAGATAGACCAAAAGA+GGG | - | chr6_4:26628465-26628484 | None:intergenic | 30.0% | |
| ATAAGAAGGAAATGAAGAAC+GGG | - | chr6_4:26628625-26628644 | None:intergenic | 30.0% | |
| GATAAGAAGGAAATGAAGAA+CGG | - | chr6_4:26628626-26628645 | None:intergenic | 30.0% | |
| GACGAACCATTTCAATAGTA+AGG | - | chr6_4:26628374-26628393 | None:intergenic | 35.0% | |
| TATAGTCCCATTGGAAAAAG+GGG | - | chr6_4:26628419-26628438 | None:intergenic | 35.0% | |
| GAATGTAGATAGACCAAAAG+AGG | - | chr6_4:26628466-26628485 | None:intergenic | 35.0% | |
| ! | TTTTGGTCTATCTACATTCC+AGG | + | chr6_4:26628467-26628486 | Msa0983540:CDS | 35.0% |
| TTTCCTTCTTATCGAATCCA+AGG | + | chr6_4:26628633-26628652 | Msa0983540:CDS | 35.0% | |
| TTCCTTCTTATCGAATCCAA+GGG | + | chr6_4:26628634-26628653 | Msa0983540:CDS | 35.0% | |
| CAACAACGAAATGACAAGAT+GGG | + | chr6_4:26628808-26628827 | Msa0983540:CDS | 35.0% | |
| AACAACGAAATGACAAGATG+GGG | + | chr6_4:26628809-26628828 | Msa0983540:CDS | 35.0% | |
| TTCGACCCTTCTTTCTAAAT+GGG | - | chr6_4:26628848-26628867 | None:intergenic | 35.0% | |
| ! | TCATCTTCATTGGAGCTTTT+TGG | - | chr6_4:26629014-26629033 | None:intergenic | 35.0% |
| GACGAACCATTTCAATAGTA+AGG | - | chr6_4:26628374-26628393 | None:intergenic | 35.0% | |
| TATAGTCCCATTGGAAAAAG+GGG | - | chr6_4:26628419-26628438 | None:intergenic | 35.0% | |
| GAATGTAGATAGACCAAAAG+AGG | - | chr6_4:26628466-26628485 | None:intergenic | 35.0% | |
| ! | TTTTGGTCTATCTACATTCC+AGG | + | chr6_4:26628467-26628486 | Msa0983540:CDS | 35.0% |
| TTTCCTTCTTATCGAATCCA+AGG | + | chr6_4:26628633-26628652 | Msa0983540:CDS | 35.0% | |
| TTCCTTCTTATCGAATCCAA+GGG | + | chr6_4:26628634-26628653 | Msa0983540:CDS | 35.0% | |
| CAACAACGAAATGACAAGAT+GGG | + | chr6_4:26628808-26628827 | Msa0983540:CDS | 35.0% | |
| AACAACGAAATGACAAGATG+GGG | + | chr6_4:26628809-26628828 | Msa0983540:CDS | 35.0% | |
| TTCGACCCTTCTTTCTAAAT+GGG | - | chr6_4:26628848-26628867 | None:intergenic | 35.0% | |
| ! | TCATCTTCATTGGAGCTTTT+TGG | - | chr6_4:26629014-26629033 | None:intergenic | 35.0% |
| CAGCACCCTTACTATTGAAA+TGG | + | chr6_4:26628365-26628384 | Msa0983540:CDS | 40.0% | |
| GGGAATGAAGGGATAAGAAT+AGG | - | chr6_4:26628445-26628464 | None:intergenic | 40.0% | |
| ! | TATCCCTTCATTCCCTCTTT+TGG | + | chr6_4:26628450-26628469 | Msa0983540:CDS | 40.0% |
| AGACCAAAAGAGGGAATGAA+GGG | - | chr6_4:26628456-26628475 | None:intergenic | 40.0% | |
| TAGACCAAAAGAGGGAATGA+AGG | - | chr6_4:26628457-26628476 | None:intergenic | 40.0% | |
| AAATTCATACGCTCCATGGA+CGG | + | chr6_4:26628490-26628509 | Msa0983540:CDS | 40.0% | |
| TGTCTGGTAATAGAATAGGG+CGG | - | chr6_4:26628546-26628565 | None:intergenic | 40.0% | |
| TCCTTCTTATCGAATCCAAG+GGG | + | chr6_4:26628635-26628654 | Msa0983540:CDS | 40.0% | |
| TAAATATGAGAAGTCCCCCT+TGG | - | chr6_4:26628653-26628672 | None:intergenic | 40.0% | |
| GAAGGATACACCAAAGACTT+AGG | + | chr6_4:26628764-26628783 | Msa0983540:CDS | 40.0% | |
| GCAACAACGAAATGACAAGA+TGG | + | chr6_4:26628807-26628826 | Msa0983540:CDS | 40.0% | |
| TCGACCCTTCTTTCTAAATG+GGG | - | chr6_4:26628847-26628866 | None:intergenic | 40.0% | |
| CTTCGACCCTTCTTTCTAAA+TGG | - | chr6_4:26628849-26628868 | None:intergenic | 40.0% | |
| CATTTAGAAAGAAGGGTCGA+AGG | + | chr6_4:26628847-26628866 | Msa0983540:CDS | 40.0% | |
| ! | AAAGAAGGGTCGAAGGTTTT+GGG | + | chr6_4:26628854-26628873 | Msa0983540:CDS | 40.0% |
| ! | TCTTCATTGGAGCTTTTTGG+TGG | - | chr6_4:26629011-26629030 | None:intergenic | 40.0% |
| CAGCACCCTTACTATTGAAA+TGG | + | chr6_4:26628365-26628384 | Msa0983540:CDS | 40.0% | |
| GGGAATGAAGGGATAAGAAT+AGG | - | chr6_4:26628445-26628464 | None:intergenic | 40.0% | |
| ! | TATCCCTTCATTCCCTCTTT+TGG | + | chr6_4:26628450-26628469 | Msa0983540:CDS | 40.0% |
| AGACCAAAAGAGGGAATGAA+GGG | - | chr6_4:26628456-26628475 | None:intergenic | 40.0% | |
| TAGACCAAAAGAGGGAATGA+AGG | - | chr6_4:26628457-26628476 | None:intergenic | 40.0% | |
| AAATTCATACGCTCCATGGA+CGG | + | chr6_4:26628490-26628509 | Msa0983540:CDS | 40.0% | |
| TGTCTGGTAATAGAATAGGG+CGG | - | chr6_4:26628546-26628565 | None:intergenic | 40.0% | |
| TCCTTCTTATCGAATCCAAG+GGG | + | chr6_4:26628635-26628654 | Msa0983540:CDS | 40.0% | |
| TAAATATGAGAAGTCCCCCT+TGG | - | chr6_4:26628653-26628672 | None:intergenic | 40.0% | |
| GAAGGATACACCAAAGACTT+AGG | + | chr6_4:26628764-26628783 | Msa0983540:CDS | 40.0% | |
| GCAACAACGAAATGACAAGA+TGG | + | chr6_4:26628807-26628826 | Msa0983540:CDS | 40.0% | |
| TCGACCCTTCTTTCTAAATG+GGG | - | chr6_4:26628847-26628866 | None:intergenic | 40.0% | |
| CTTCGACCCTTCTTTCTAAA+TGG | - | chr6_4:26628849-26628868 | None:intergenic | 40.0% | |
| CATTTAGAAAGAAGGGTCGA+AGG | + | chr6_4:26628847-26628866 | Msa0983540:CDS | 40.0% | |
| ! | AAAGAAGGGTCGAAGGTTTT+GGG | + | chr6_4:26628854-26628873 | Msa0983540:CDS | 40.0% |
| ! | TCTTCATTGGAGCTTTTTGG+TGG | - | chr6_4:26629011-26629030 | None:intergenic | 40.0% |
| CATGGAGCGTATGAATTTCC+TGG | - | chr6_4:26628488-26628507 | None:intergenic | 45.0% | |
| CAGGAAATTCATACGCTCCA+TGG | + | chr6_4:26628486-26628505 | Msa0983540:CDS | 45.0% | |
| GAGCTTCTCCCAATTATGTC+TGG | - | chr6_4:26628562-26628581 | None:intergenic | 45.0% | |
| AACGGGAACGAAACGAAATG+AGG | - | chr6_4:26628608-26628627 | None:intergenic | 45.0% | |
| CCTTCTTATCGAATCCAAGG+GGG | + | chr6_4:26628636-26628655 | Msa0983540:CDS | 45.0% | |
| TCTTCTCTTTACCACGCGAT+AGG | + | chr6_4:26628716-26628735 | Msa0983540:CDS | 45.0% | |
| TAGGGTTAGGCCTAAGTCTT+TGG | - | chr6_4:26628777-26628796 | None:intergenic | 45.0% | |
| AGACTTAGGCCTAACCCTAA+CGG | + | chr6_4:26628778-26628797 | Msa0983540:CDS | 45.0% | |
| GTTGTTGCTCATTCCCGTTA+GGG | - | chr6_4:26628795-26628814 | None:intergenic | 45.0% | |
| GCACCCCCATTTAGAAAGAA+GGG | + | chr6_4:26628840-26628859 | Msa0983540:CDS | 45.0% | |
| CGACCCTTCTTTCTAAATGG+GGG | - | chr6_4:26628846-26628865 | None:intergenic | 45.0% | |
| ! | GAAAGAAGGGTCGAAGGTTT+TGG | + | chr6_4:26628853-26628872 | Msa0983540:CDS | 45.0% |
| TGGAGTGTGCATCTGTATGT+TGG | + | chr6_4:26629047-26629066 | Msa0983540:CDS | 45.0% | |
| GGAGTGTGCATCTGTATGTT+GGG | + | chr6_4:26629048-26629067 | Msa0983540:CDS | 45.0% | |
| CATGGAGCGTATGAATTTCC+TGG | - | chr6_4:26628488-26628507 | None:intergenic | 45.0% | |
| CAGGAAATTCATACGCTCCA+TGG | + | chr6_4:26628486-26628505 | Msa0983540:CDS | 45.0% | |
| GAGCTTCTCCCAATTATGTC+TGG | - | chr6_4:26628562-26628581 | None:intergenic | 45.0% | |
| AACGGGAACGAAACGAAATG+AGG | - | chr6_4:26628608-26628627 | None:intergenic | 45.0% | |
| CCTTCTTATCGAATCCAAGG+GGG | + | chr6_4:26628636-26628655 | Msa0983540:CDS | 45.0% | |
| TCTTCTCTTTACCACGCGAT+AGG | + | chr6_4:26628716-26628735 | Msa0983540:CDS | 45.0% | |
| TAGGGTTAGGCCTAAGTCTT+TGG | - | chr6_4:26628777-26628796 | None:intergenic | 45.0% | |
| AGACTTAGGCCTAACCCTAA+CGG | + | chr6_4:26628778-26628797 | Msa0983540:CDS | 45.0% | |
| GTTGTTGCTCATTCCCGTTA+GGG | - | chr6_4:26628795-26628814 | None:intergenic | 45.0% | |
| GCACCCCCATTTAGAAAGAA+GGG | + | chr6_4:26628840-26628859 | Msa0983540:CDS | 45.0% | |
| CGACCCTTCTTTCTAAATGG+GGG | - | chr6_4:26628846-26628865 | None:intergenic | 45.0% | |
| ! | GAAAGAAGGGTCGAAGGTTT+TGG | + | chr6_4:26628853-26628872 | Msa0983540:CDS | 45.0% |
| TGGAGTGTGCATCTGTATGT+TGG | + | chr6_4:26629047-26629066 | Msa0983540:CDS | 45.0% | |
| GGAGTGTGCATCTGTATGTT+GGG | + | chr6_4:26629048-26629067 | Msa0983540:CDS | 45.0% | |
| GTCAGTAGAGATGTTCCCAC+AGG | + | chr6_4:26628391-26628410 | Msa0983540:CDS | 50.0% | |
| !! | TTGGAAAAAGGGGCACCTGT+GGG | - | chr6_4:26628409-26628428 | None:intergenic | 50.0% |
| !! | ATTGGAAAAAGGGGCACCTG+TGG | - | chr6_4:26628410-26628429 | None:intergenic | 50.0% |
| ! | ACAGGTGCCCCTTTTTCCAA+TGG | + | chr6_4:26628409-26628428 | Msa0983540:CDS | 50.0% |
| ! | CAGGTGCCCCTTTTTCCAAT+GGG | + | chr6_4:26628410-26628429 | Msa0983540:CDS | 50.0% |
| TCCATGGACGGAGCAAAAAG+TGG | + | chr6_4:26628502-26628521 | Msa0983540:CDS | 50.0% | |
| !!! | TCCACTTTTTGCTCCGTCCA+TGG | - | chr6_4:26628506-26628525 | None:intergenic | 50.0% |
| CGGAGCAAAAAGTGGAGTCT+TGG | + | chr6_4:26628510-26628529 | Msa0983540:CDS | 50.0% | |
| AGCTCATCCGAAACTAGAGC+TGG | + | chr6_4:26628577-26628596 | Msa0983540:CDS | 50.0% | |
| ! | GGCGTTTCCAGCTCTAGTTT+CGG | - | chr6_4:26628587-26628606 | None:intergenic | 50.0% |
| CCCCCTTGGATTCGATAAGA+AGG | - | chr6_4:26628639-26628658 | None:intergenic | 50.0% | |
| ATAGGTCAGCAAAGCGTGAG+CGG | + | chr6_4:26628734-26628753 | Msa0983540:CDS | 50.0% | |
| GACTTAGGCCTAACCCTAAC+GGG | + | chr6_4:26628779-26628798 | Msa0983540:CDS | 50.0% | |
| TGCTCATTCCCGTTAGGGTT+AGG | - | chr6_4:26628790-26628809 | None:intergenic | 50.0% | |
| CGTTGTTGCTCATTCCCGTT+AGG | - | chr6_4:26628796-26628815 | None:intergenic | 50.0% | |
| ! | AATGACAAGATGGGGTGCTC+CGG | + | chr6_4:26628817-26628836 | Msa0983540:CDS | 50.0% |
| !! | TCTTTCTAAATGGGGGTGCC+CGG | - | chr6_4:26628839-26628858 | None:intergenic | 50.0% |
| GGCACCCCCATTTAGAAAGA+AGG | + | chr6_4:26628839-26628858 | Msa0983540:CDS | 50.0% | |
| GTGCCACCTGAACCTGAAAT+CGG | + | chr6_4:26628928-26628947 | Msa0983540:CDS | 50.0% | |
| TGCCACCTGAACCTGAAATC+GGG | + | chr6_4:26628929-26628948 | Msa0983540:CDS | 50.0% | |
| !! | TCAAGCCCGATTTCAGGTTC+AGG | - | chr6_4:26628937-26628956 | None:intergenic | 50.0% |
| AGAGCTTCAAGCCCGATTTC+AGG | - | chr6_4:26628943-26628962 | None:intergenic | 50.0% | |
| GTCAGTAGAGATGTTCCCAC+AGG | + | chr6_4:26628391-26628410 | Msa0983540:CDS | 50.0% | |
| !! | TTGGAAAAAGGGGCACCTGT+GGG | - | chr6_4:26628409-26628428 | None:intergenic | 50.0% |
| !! | ATTGGAAAAAGGGGCACCTG+TGG | - | chr6_4:26628410-26628429 | None:intergenic | 50.0% |
| ! | ACAGGTGCCCCTTTTTCCAA+TGG | + | chr6_4:26628409-26628428 | Msa0983540:CDS | 50.0% |
| ! | CAGGTGCCCCTTTTTCCAAT+GGG | + | chr6_4:26628410-26628429 | Msa0983540:CDS | 50.0% |
| TCCATGGACGGAGCAAAAAG+TGG | + | chr6_4:26628502-26628521 | Msa0983540:CDS | 50.0% | |
| !!! | TCCACTTTTTGCTCCGTCCA+TGG | - | chr6_4:26628506-26628525 | None:intergenic | 50.0% |
| CGGAGCAAAAAGTGGAGTCT+TGG | + | chr6_4:26628510-26628529 | Msa0983540:CDS | 50.0% | |
| AGCTCATCCGAAACTAGAGC+TGG | + | chr6_4:26628577-26628596 | Msa0983540:CDS | 50.0% | |
| ! | GGCGTTTCCAGCTCTAGTTT+CGG | - | chr6_4:26628587-26628606 | None:intergenic | 50.0% |
| CCCCCTTGGATTCGATAAGA+AGG | - | chr6_4:26628639-26628658 | None:intergenic | 50.0% | |
| ATAGGTCAGCAAAGCGTGAG+CGG | + | chr6_4:26628734-26628753 | Msa0983540:CDS | 50.0% | |
| GACTTAGGCCTAACCCTAAC+GGG | + | chr6_4:26628779-26628798 | Msa0983540:CDS | 50.0% | |
| TGCTCATTCCCGTTAGGGTT+AGG | - | chr6_4:26628790-26628809 | None:intergenic | 50.0% | |
| CGTTGTTGCTCATTCCCGTT+AGG | - | chr6_4:26628796-26628815 | None:intergenic | 50.0% | |
| ! | AATGACAAGATGGGGTGCTC+CGG | + | chr6_4:26628817-26628836 | Msa0983540:CDS | 50.0% |
| !! | TCTTTCTAAATGGGGGTGCC+CGG | - | chr6_4:26628839-26628858 | None:intergenic | 50.0% |
| GGCACCCCCATTTAGAAAGA+AGG | + | chr6_4:26628839-26628858 | Msa0983540:CDS | 50.0% | |
| GTGCCACCTGAACCTGAAAT+CGG | + | chr6_4:26628928-26628947 | Msa0983540:CDS | 50.0% | |
| TGCCACCTGAACCTGAAATC+GGG | + | chr6_4:26628929-26628948 | Msa0983540:CDS | 50.0% | |
| !! | TCAAGCCCGATTTCAGGTTC+AGG | - | chr6_4:26628937-26628956 | None:intergenic | 50.0% |
| AGAGCTTCAAGCCCGATTTC+AGG | - | chr6_4:26628943-26628962 | None:intergenic | 50.0% | |
| TAGGTCAGCAAAGCGTGAGC+GGG | + | chr6_4:26628735-26628754 | Msa0983540:CDS | 55.0% | |
| ! | ATGACAAGATGGGGTGCTCC+GGG | + | chr6_4:26628818-26628837 | Msa0983540:CDS | 55.0% |
| !! | AGCCCGATTTCAGGTTCAGG+TGG | - | chr6_4:26628934-26628953 | None:intergenic | 55.0% |
| GACCAACAGCCATCAGCTGT+CGG | - | chr6_4:26628981-26629000 | None:intergenic | 55.0% | |
| TGTTCTTCTGTCGTGCGACC+CGG | + | chr6_4:26629071-26629090 | Msa0983540:CDS | 55.0% | |
| GCCCACGCCTCCTATTTGTT+CGG | + | chr6_4:26629114-26629133 | Msa0983540:CDS | 55.0% | |
| ! | CCCGAACAAATAGGAGGCGT+GGG | - | chr6_4:26629118-26629137 | None:intergenic | 55.0% |
| CCCACGCCTCCTATTTGTTC+GGG | + | chr6_4:26629115-26629134 | Msa0983540:CDS | 55.0% | |
| CCACGCCTCCTATTTGTTCG+GGG | + | chr6_4:26629116-26629135 | Msa0983540:CDS | 55.0% | |
| ! | GCGTGAACTCTGACTCGATC+CGG | + | chr6_4:26629145-26629164 | Msa0983540:CDS | 55.0% |
| ! | CGTGAACTCTGACTCGATCC+GGG | + | chr6_4:26629146-26629165 | Msa0983540:CDS | 55.0% |
| TCAACTGAGCATCTCAGCGG+CGG | - | chr6_4:26629181-26629200 | None:intergenic | 55.0% | |
| TAGGTCAGCAAAGCGTGAGC+GGG | + | chr6_4:26628735-26628754 | Msa0983540:CDS | 55.0% | |
| ! | ATGACAAGATGGGGTGCTCC+GGG | + | chr6_4:26628818-26628837 | Msa0983540:CDS | 55.0% |
| !! | AGCCCGATTTCAGGTTCAGG+TGG | - | chr6_4:26628934-26628953 | None:intergenic | 55.0% |
| GACCAACAGCCATCAGCTGT+CGG | - | chr6_4:26628981-26629000 | None:intergenic | 55.0% | |
| TGTTCTTCTGTCGTGCGACC+CGG | + | chr6_4:26629071-26629090 | Msa0983540:CDS | 55.0% | |
| GCCCACGCCTCCTATTTGTT+CGG | + | chr6_4:26629114-26629133 | Msa0983540:CDS | 55.0% | |
| ! | CCCGAACAAATAGGAGGCGT+GGG | - | chr6_4:26629118-26629137 | None:intergenic | 55.0% |
| CCCACGCCTCCTATTTGTTC+GGG | + | chr6_4:26629115-26629134 | Msa0983540:CDS | 55.0% | |
| CCACGCCTCCTATTTGTTCG+GGG | + | chr6_4:26629116-26629135 | Msa0983540:CDS | 55.0% | |
| ! | GCGTGAACTCTGACTCGATC+CGG | + | chr6_4:26629145-26629164 | Msa0983540:CDS | 55.0% |
| ! | CGTGAACTCTGACTCGATCC+GGG | + | chr6_4:26629146-26629165 | Msa0983540:CDS | 55.0% |
| TCAACTGAGCATCTCAGCGG+CGG | - | chr6_4:26629181-26629200 | None:intergenic | 55.0% | |
| CGCTTTGCTGACCTATCGCG+TGG | - | chr6_4:26628730-26628749 | None:intergenic | 60.0% | |
| ACAAGCACCACCCGACGAAG+GGG | - | chr6_4:26628899-26628918 | None:intergenic | 60.0% | |
| CACAAGCACCACCCGACGAA+GGG | - | chr6_4:26628900-26628919 | None:intergenic | 60.0% | |
| ACACAAGCACCACCCGACGA+AGG | - | chr6_4:26628901-26628920 | None:intergenic | 60.0% | |
| TTCGTCGGGTGGTGCTTGTG+TGG | + | chr6_4:26628900-26628919 | Msa0983540:CDS | 60.0% | |
| TCGTCGGGTGGTGCTTGTGT+GGG | + | chr6_4:26628901-26628920 | Msa0983540:CDS | 60.0% | |
| !! | CAGCTGTCGGCTCGTTGGTA+AGG | - | chr6_4:26628968-26628987 | None:intergenic | 60.0% |
| ACCAACGAGCCGACAGCTGA+TGG | + | chr6_4:26628969-26628988 | Msa0983540:CDS | 60.0% | |
| AGCCGACAGCTGATGGCTGT+TGG | + | chr6_4:26628976-26628995 | Msa0983540:CDS | 60.0% | |
| ACAGGTCGCACATAAGCCGC+CGG | - | chr6_4:26629093-26629112 | None:intergenic | 60.0% | |
| ! | AAATAGGAGGCGTGGGCCAC+AGG | - | chr6_4:26629111-26629130 | None:intergenic | 60.0% |
| CCCCGAACAAATAGGAGGCG+TGG | - | chr6_4:26629119-26629138 | None:intergenic | 60.0% | |
| CGCCTCCTATTTGTTCGGGG+CGG | + | chr6_4:26629119-26629138 | Msa0983540:CDS | 60.0% | |
| GCCTCCTATTTGTTCGGGGC+GGG | + | chr6_4:26629120-26629139 | Msa0983540:CDS | 60.0% | |
| TCCTATTTGTTCGGGGCGGG+CGG | + | chr6_4:26629123-26629142 | Msa0983540:CDS | 60.0% | |
| CAGCGGCGGGATTGAATACC+CGG | - | chr6_4:26629167-26629186 | None:intergenic | 60.0% | |
| CAACTGAGCATCTCAGCGGC+GGG | - | chr6_4:26629180-26629199 | None:intergenic | 60.0% | |
| CGCTTTGCTGACCTATCGCG+TGG | - | chr6_4:26628730-26628749 | None:intergenic | 60.0% | |
| ACAAGCACCACCCGACGAAG+GGG | - | chr6_4:26628899-26628918 | None:intergenic | 60.0% | |
| CACAAGCACCACCCGACGAA+GGG | - | chr6_4:26628900-26628919 | None:intergenic | 60.0% | |
| ACACAAGCACCACCCGACGA+AGG | - | chr6_4:26628901-26628920 | None:intergenic | 60.0% | |
| TTCGTCGGGTGGTGCTTGTG+TGG | + | chr6_4:26628900-26628919 | Msa0983540:CDS | 60.0% | |
| TCGTCGGGTGGTGCTTGTGT+GGG | + | chr6_4:26628901-26628920 | Msa0983540:CDS | 60.0% | |
| !! | CAGCTGTCGGCTCGTTGGTA+AGG | - | chr6_4:26628968-26628987 | None:intergenic | 60.0% |
| ACCAACGAGCCGACAGCTGA+TGG | + | chr6_4:26628969-26628988 | Msa0983540:CDS | 60.0% | |
| AGCCGACAGCTGATGGCTGT+TGG | + | chr6_4:26628976-26628995 | Msa0983540:CDS | 60.0% | |
| ACAGGTCGCACATAAGCCGC+CGG | - | chr6_4:26629093-26629112 | None:intergenic | 60.0% | |
| ! | AAATAGGAGGCGTGGGCCAC+AGG | - | chr6_4:26629111-26629130 | None:intergenic | 60.0% |
| CCCCGAACAAATAGGAGGCG+TGG | - | chr6_4:26629119-26629138 | None:intergenic | 60.0% | |
| CGCCTCCTATTTGTTCGGGG+CGG | + | chr6_4:26629119-26629138 | Msa0983540:CDS | 60.0% | |
| GCCTCCTATTTGTTCGGGGC+GGG | + | chr6_4:26629120-26629139 | Msa0983540:CDS | 60.0% | |
| TCCTATTTGTTCGGGGCGGG+CGG | + | chr6_4:26629123-26629142 | Msa0983540:CDS | 60.0% | |
| CAGCGGCGGGATTGAATACC+CGG | - | chr6_4:26629167-26629186 | None:intergenic | 60.0% | |
| CAACTGAGCATCTCAGCGGC+GGG | - | chr6_4:26629180-26629199 | None:intergenic | 60.0% | |
| TTTCCCCGTCCCCCCTTCGT+CGG | + | chr6_4:26628885-26628904 | Msa0983540:CDS | 65.0% | |
| AAGCACCACCCGACGAAGGG+GGG | - | chr6_4:26628897-26628916 | None:intergenic | 65.0% | |
| CAAGCACCACCCGACGAAGG+GGG | - | chr6_4:26628898-26628917 | None:intergenic | 65.0% | |
| CGTCGGGTGGTGCTTGTGTG+GGG | + | chr6_4:26628902-26628921 | Msa0983540:CDS | 65.0% | |
| GTCGGGTGGTGCTTGTGTGG+GGG | + | chr6_4:26628903-26628922 | Msa0983540:CDS | 65.0% | |
| TCGGGTGGTGCTTGTGTGGG+GGG | + | chr6_4:26628904-26628923 | Msa0983540:CDS | 65.0% | |
| !! | GCCATCAGCTGTCGGCTCGT+TGG | - | chr6_4:26628973-26628992 | None:intergenic | 65.0% |
| TCTTCTGTCGTGCGACCCGG+CGG | + | chr6_4:26629074-26629093 | Msa0983540:CDS | 65.0% | |
| CAGGTCGCACATAAGCCGCC+GGG | - | chr6_4:26629092-26629111 | None:intergenic | 65.0% | |
| GGCGGCTTATGTGCGACCTG+TGG | + | chr6_4:26629092-26629111 | Msa0983540:CDS | 65.0% | |
| GCCCGCCCCGAACAAATAGG+AGG | - | chr6_4:26629124-26629143 | None:intergenic | 65.0% | |
| TTTCCCCGTCCCCCCTTCGT+CGG | + | chr6_4:26628885-26628904 | Msa0983540:CDS | 65.0% | |
| AAGCACCACCCGACGAAGGG+GGG | - | chr6_4:26628897-26628916 | None:intergenic | 65.0% | |
| CAAGCACCACCCGACGAAGG+GGG | - | chr6_4:26628898-26628917 | None:intergenic | 65.0% | |
| CGTCGGGTGGTGCTTGTGTG+GGG | + | chr6_4:26628902-26628921 | Msa0983540:CDS | 65.0% | |
| GTCGGGTGGTGCTTGTGTGG+GGG | + | chr6_4:26628903-26628922 | Msa0983540:CDS | 65.0% | |
| TCGGGTGGTGCTTGTGTGGG+GGG | + | chr6_4:26628904-26628923 | Msa0983540:CDS | 65.0% | |
| !! | GCCATCAGCTGTCGGCTCGT+TGG | - | chr6_4:26628973-26628992 | None:intergenic | 65.0% |
| TCTTCTGTCGTGCGACCCGG+CGG | + | chr6_4:26629074-26629093 | Msa0983540:CDS | 65.0% | |
| CAGGTCGCACATAAGCCGCC+GGG | - | chr6_4:26629092-26629111 | None:intergenic | 65.0% | |
| GGCGGCTTATGTGCGACCTG+TGG | + | chr6_4:26629092-26629111 | Msa0983540:CDS | 65.0% | |
| GCCCGCCCCGAACAAATAGG+AGG | - | chr6_4:26629124-26629143 | None:intergenic | 65.0% | |
| !! | AAGGGTGCTGCCGTGCCACG+AGG | - | chr6_4:26628355-26628374 | None:intergenic | 70.0% |
| CAGCAAAGCGTGAGCGGGCG+CGG | + | chr6_4:26628740-26628759 | Msa0983540:CDS | 70.0% | |
| GGGGGGACGGGGAAAGCTAC+AGG | - | chr6_4:26628880-26628899 | None:intergenic | 70.0% | |
| TTCCCCGTCCCCCCTTCGTC+GGG | + | chr6_4:26628886-26628905 | Msa0983540:CDS | 70.0% | |
| ACCACCCGACGAAGGGGGGA+CGG | - | chr6_4:26628893-26628912 | None:intergenic | 70.0% | |
| GCCGCCCGCCCCGAACAAAT+AGG | - | chr6_4:26629127-26629146 | None:intergenic | 70.0% | |
| !! | AAGGGTGCTGCCGTGCCACG+AGG | - | chr6_4:26628355-26628374 | None:intergenic | 70.0% |
| CAGCAAAGCGTGAGCGGGCG+CGG | + | chr6_4:26628740-26628759 | Msa0983540:CDS | 70.0% | |
| GGGGGGACGGGGAAAGCTAC+AGG | - | chr6_4:26628880-26628899 | None:intergenic | 70.0% | |
| TTCCCCGTCCCCCCTTCGTC+GGG | + | chr6_4:26628886-26628905 | Msa0983540:CDS | 70.0% | |
| ACCACCCGACGAAGGGGGGA+CGG | - | chr6_4:26628893-26628912 | None:intergenic | 70.0% | |
| GCCGCCCGCCCCGAACAAAT+AGG | - | chr6_4:26629127-26629146 | None:intergenic | 70.0% | |
| AGCGTGAGCGGGCGCGGAGA+AGG | + | chr6_4:26628746-26628765 | Msa0983540:CDS | 75.0% | |
| CACCCGACGAAGGGGGGACG+GGG | - | chr6_4:26628891-26628910 | None:intergenic | 75.0% | |
| CCACCCGACGAAGGGGGGAC+GGG | - | chr6_4:26628892-26628911 | None:intergenic | 75.0% | |
| AGCGTGAGCGGGCGCGGAGA+AGG | + | chr6_4:26628746-26628765 | Msa0983540:CDS | 75.0% | |
| CACCCGACGAAGGGGGGACG+GGG | - | chr6_4:26628891-26628910 | None:intergenic | 75.0% | |
| CCACCCGACGAAGGGGGGAC+GGG | - | chr6_4:26628892-26628911 | None:intergenic | 75.0% | |
| ! | CCCGTCCCCCCTTCGTCGGG+TGG | + | chr6_4:26628889-26628908 | Msa0983540:CDS | 80.0% |
| ! | CCCGTCCCCCCTTCGTCGGG+TGG | + | chr6_4:26628889-26628908 | Msa0983540:CDS | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6_4 | gene | 26628343 | 26629200 | 26628343 | ID=Msa0983540;Name=Msa0983540 |
| chr6_4 | mRNA | 26628343 | 26629200 | 26628343 | ID=Msa0983540-mRNA-1;Parent=Msa0983540;Name=Msa0983540-mRNA-1;_AED=0.34;_eAED=0.34;_QI=0|-1|0|1|-1|1|1|0|285 |
| chr6_4 | exon | 26628343 | 26629200 | 26628343 | ID=Msa0983540-mRNA-1:exon:7524;Parent=Msa0983540-mRNA-1 |
| chr6_4 | CDS | 26628343 | 26629200 | 26628343 | ID=Msa0983540-mRNA-1:cds;Parent=Msa0983540-mRNA-1 |
| Gene Sequence |
| Protein sequence |
