Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1202770 | G7LDZ5 | 97.778 | 180 | 4 | 0 | 1 | 180 | 1 | 180 | 1.90e-122 | 352 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0002230 | Msa1202770 | -0.803229 | 3.852031e-49 | -8.615850e-47 |
Msa0004790 | Msa1202770 | 0.823505 | 1.336208e-53 | -8.615850e-47 |
Msa0021210 | Msa1202770 | -0.810500 | 1.117889e-50 | -8.615850e-47 |
Msa0026490 | Msa1202770 | -0.800737 | 1.252306e-48 | -8.615850e-47 |
Msa0029850 | Msa1202770 | -0.867213 | 1.615194e-65 | -8.615850e-47 |
Msa0032880 | Msa1202770 | -0.803982 | 2.688041e-49 | -8.615850e-47 |
Msa0036140 | Msa1202770 | -0.813841 | 2.086858e-51 | -8.615850e-47 |
Msa0042980 | Msa1202770 | 0.819957 | 8.840712e-53 | -8.615850e-47 |
Msa0063350 | Msa1202770 | 0.818799 | 1.622923e-52 | -8.615850e-47 |
Msa0075880 | Msa1202770 | -0.830000 | 3.757740e-55 | -8.615850e-47 |
Msa0077180 | Msa1202770 | -0.842787 | 2.088980e-58 | -8.615850e-47 |
Msa0079070 | Msa1202770 | -0.806194 | 9.261917e-50 | -8.615850e-47 |
Msa0084430 | Msa1202770 | -0.801817 | 7.528750e-49 | -8.615850e-47 |
Msa0114430 | Msa1202770 | -0.815239 | 1.023646e-51 | -8.615850e-47 |
Msa0607540 | Msa1202770 | -0.824836 | 6.503822e-54 | -8.615850e-47 |
Msa0608620 | Msa1202770 | -0.828112 | 1.077477e-54 | -8.615850e-47 |
Msa0613460 | Msa1202770 | -0.817050 | 4.030943e-52 | -8.615850e-47 |
Msa0621750 | Msa1202770 | 0.844097 | 9.335762e-59 | -8.615850e-47 |
Msa0626220 | Msa1202770 | -0.806497 | 7.993410e-50 | -8.615850e-47 |
Msa0631200 | Msa1202770 | -0.817279 | 3.580050e-52 | -8.615850e-47 |
Msa0647830 | Msa1202770 | -0.817503 | 3.188615e-52 | -8.615850e-47 |
Msa0654010 | Msa1202770 | -0.808181 | 3.513822e-50 | -8.615850e-47 |
Msa0657610 | Msa1202770 | -0.830563 | 2.737453e-55 | -8.615850e-47 |
Msa0658570 | Msa1202770 | -0.837292 | 5.665100e-57 | -8.615850e-47 |
Msa0661190 | Msa1202770 | 0.803940 | 2.742015e-49 | -8.615850e-47 |
Msa0669440 | Msa1202770 | -0.831232 | 1.876033e-55 | -8.615850e-47 |
Msa0672690 | Msa1202770 | -0.810064 | 1.388017e-50 | -8.615850e-47 |
Msa0688070 | Msa1202770 | -0.821264 | 4.428201e-53 | -8.615850e-47 |
Msa0690440 | Msa1202770 | -0.819836 | 9.420846e-53 | -8.615850e-47 |
Msa0711790 | Msa1202770 | -0.819809 | 9.557167e-53 | -8.615850e-47 |
Msa0715720 | Msa1202770 | -0.800038 | 1.738581e-48 | -8.615850e-47 |
Msa0722910 | Msa1202770 | -0.812496 | 4.117764e-51 | -8.615850e-47 |
Msa0723110 | Msa1202770 | -0.829089 | 6.256281e-55 | -8.615850e-47 |
Msa0739280 | Msa1202770 | -0.802535 | 5.357622e-49 | -8.615850e-47 |
Msa0744170 | Msa1202770 | 0.871380 | 7.140063e-67 | -8.615850e-47 |
Msa0745260 | Msa1202770 | 0.830204 | 3.350354e-55 | -8.615850e-47 |
Msa0747260 | Msa1202770 | -0.820798 | 5.670058e-53 | -8.615850e-47 |
Msa0747270 | Msa1202770 | -0.800066 | 1.715567e-48 | -8.615850e-47 |
Msa0777570 | Msa1202770 | 0.820360 | 7.147957e-53 | -8.615850e-47 |
Msa0788070 | Msa1202770 | 0.838910 | 2.171113e-57 | -8.615850e-47 |
Msa0793140 | Msa1202770 | 0.804653 | 1.948069e-49 | -8.615850e-47 |
Msa0801740 | Msa1202770 | -0.810945 | 8.953181e-51 | -8.615850e-47 |
Msa0807030 | Msa1202770 | -0.809215 | 2.112381e-50 | -8.615850e-47 |
Msa0825240 | Msa1202770 | 0.837125 | 6.252556e-57 | -8.615850e-47 |
Msa0830530 | Msa1202770 | -0.801225 | 9.954051e-49 | -8.615850e-47 |
Msa0125050 | Msa1202770 | -0.834047 | 3.755381e-56 | -8.615850e-47 |
Msa0136890 | Msa1202770 | 0.800342 | 1.507521e-48 | -8.615850e-47 |
Msa0140500 | Msa1202770 | 0.805076 | 1.589203e-49 | -8.615850e-47 |
Msa0140510 | Msa1202770 | 0.825148 | 5.488587e-54 | -8.615850e-47 |
Msa0140860 | Msa1202770 | -0.815594 | 8.532796e-52 | -8.615850e-47 |
Msa0145310 | Msa1202770 | -0.819740 | 9.912170e-53 | -8.615850e-47 |
Msa0150840 | Msa1202770 | -0.805071 | 1.593289e-49 | -8.615850e-47 |
Msa0169820 | Msa1202770 | -0.870882 | 1.042981e-66 | -8.615850e-47 |
Msa0169860 | Msa1202770 | -0.801793 | 7.614990e-49 | -8.615850e-47 |
Msa0170110 | Msa1202770 | 0.808326 | 3.272575e-50 | -8.615850e-47 |
Msa0175390 | Msa1202770 | -0.819148 | 1.351897e-52 | -8.615850e-47 |
Msa0178860 | Msa1202770 | 0.866828 | 2.143682e-65 | -8.615850e-47 |
Msa0183010 | Msa1202770 | 0.859418 | 4.193229e-63 | -8.615850e-47 |
Msa0187230 | Msa1202770 | -0.805555 | 1.261691e-49 | -8.615850e-47 |
Msa0187250 | Msa1202770 | -0.815736 | 7.936389e-52 | -8.615850e-47 |
Msa0199800 | Msa1202770 | 0.853322 | 2.579254e-61 | -8.615850e-47 |
Msa0213040 | Msa1202770 | -0.845651 | 3.555976e-59 | -8.615850e-47 |
Msa0215320 | Msa1202770 | 0.814155 | 1.779619e-51 | -8.615850e-47 |
Msa0223410 | Msa1202770 | 0.845538 | 3.816291e-59 | -8.615850e-47 |
Msa0226890 | Msa1202770 | -0.802460 | 5.550582e-49 | -8.615850e-47 |
Msa0229380 | Msa1202770 | -0.801208 | 1.003392e-48 | -8.615850e-47 |
Msa0230640 | Msa1202770 | 0.874344 | 7.268162e-68 | -8.615850e-47 |
Msa0365490 | Msa1202770 | -0.801451 | 8.950406e-49 | -8.615850e-47 |
Msa0371730 | Msa1202770 | -0.801541 | 8.577537e-49 | -8.615850e-47 |
Msa0373450 | Msa1202770 | -0.800251 | 1.572973e-48 | -8.615850e-47 |
Msa0379640 | Msa1202770 | -0.818638 | 1.765600e-52 | -8.615850e-47 |
Msa0381600 | Msa1202770 | 0.859970 | 2.860951e-63 | -8.615850e-47 |
Msa0381610 | Msa1202770 | 0.815483 | 9.032640e-52 | -8.615850e-47 |
Msa0383490 | Msa1202770 | 0.820462 | 6.772990e-53 | -8.615850e-47 |
Msa0387280 | Msa1202770 | -0.836308 | 1.009572e-56 | -8.615850e-47 |
Msa0388030 | Msa1202770 | 0.804921 | 1.712278e-49 | -8.615850e-47 |
Msa0389610 | Msa1202770 | 0.809899 | 1.506327e-50 | -8.615850e-47 |
Msa0389810 | Msa1202770 | -0.841068 | 5.946709e-58 | -8.615850e-47 |
Msa0390400 | Msa1202770 | 0.825720 | 4.018657e-54 | -8.615850e-47 |
Msa0392040 | Msa1202770 | 0.837420 | 5.251848e-57 | -8.615850e-47 |
Msa0394340 | Msa1202770 | -0.830017 | 3.720273e-55 | -8.615850e-47 |
Msa0412840 | Msa1202770 | -0.870286 | 1.636652e-66 | -8.615850e-47 |
Msa0425790 | Msa1202770 | -0.825059 | 5.761606e-54 | -8.615850e-47 |
Msa0427640 | Msa1202770 | 0.817354 | 3.445164e-52 | -8.615850e-47 |
Msa0431060 | Msa1202770 | -0.812816 | 3.505028e-51 | -8.615850e-47 |
Msa0433410 | Msa1202770 | 0.880996 | 3.461670e-70 | -8.615850e-47 |
Msa0442200 | Msa1202770 | -0.829753 | 4.315373e-55 | -8.615850e-47 |
Msa0444750 | Msa1202770 | 0.838404 | 2.934151e-57 | -8.615850e-47 |
Msa0453330 | Msa1202770 | -0.814989 | 1.163377e-51 | -8.615850e-47 |
Msa0453350 | Msa1202770 | -0.814521 | 1.476823e-51 | -8.615850e-47 |
Msa0457510 | Msa1202770 | -0.862285 | 5.648500e-64 | -8.615850e-47 |
Msa0458440 | Msa1202770 | -0.806540 | 7.827546e-50 | -8.615850e-47 |
Msa0465670 | Msa1202770 | 0.833043 | 6.690514e-56 | -8.615850e-47 |
Msa0466120 | Msa1202770 | -0.805720 | 1.165114e-49 | -8.615850e-47 |
Msa0466390 | Msa1202770 | -0.803884 | 2.817393e-49 | -8.615850e-47 |
Msa0468130 | Msa1202770 | -0.835531 | 1.589900e-56 | -8.615850e-47 |
Msa0469940 | Msa1202770 | 0.861571 | 9.346479e-64 | -8.615850e-47 |
Msa0471900 | Msa1202770 | -0.806673 | 7.337674e-50 | -8.615850e-47 |
Msa0472960 | Msa1202770 | 0.824728 | 6.898311e-54 | -8.615850e-47 |
Msa0477130 | Msa1202770 | 0.872622 | 2.760096e-67 | -8.615850e-47 |
Msa0482190 | Msa1202770 | 0.857564 | 1.497671e-62 | -8.615850e-47 |
Msa0982270 | Msa1202770 | -0.839863 | 1.228495e-57 | -8.615850e-47 |
Msa0983130 | Msa1202770 | 0.808808 | 2.581616e-50 | -8.615850e-47 |
Msa0992490 | Msa1202770 | 0.840761 | 7.158621e-58 | -8.615850e-47 |
Msa1006850 | Msa1202770 | -0.813984 | 1.940821e-51 | -8.615850e-47 |
Msa1018990 | Msa1202770 | 0.816015 | 6.876114e-52 | -8.615850e-47 |
Msa1029080 | Msa1202770 | 0.819549 | 1.095750e-52 | -8.615850e-47 |
Msa1033410 | Msa1202770 | 0.838986 | 2.075493e-57 | -8.615850e-47 |
Msa1041600 | Msa1202770 | 0.848237 | 6.967211e-60 | -8.615850e-47 |
Msa1052330 | Msa1202770 | -0.811506 | 6.766660e-51 | -8.615850e-47 |
Msa1054410 | Msa1202770 | -0.826165 | 3.151206e-54 | -8.615850e-47 |
Msa1062920 | Msa1202770 | -0.804910 | 1.721645e-49 | -8.615850e-47 |
Msa1068200 | Msa1202770 | 0.825150 | 5.484826e-54 | -8.615850e-47 |
Msa1073070 | Msa1202770 | 0.852607 | 4.131534e-61 | -8.615850e-47 |
Msa1075080 | Msa1202770 | 0.851194 | 1.040247e-60 | -8.615850e-47 |
Msa1075220 | Msa1202770 | 0.869470 | 3.023197e-66 | -8.615850e-47 |
Msa1079730 | Msa1202770 | 0.870477 | 1.416761e-66 | -8.615850e-47 |
Msa1085300 | Msa1202770 | -0.802280 | 6.045758e-49 | -8.615850e-47 |
Msa1090260 | Msa1202770 | -0.819911 | 9.059122e-53 | -8.615850e-47 |
Msa1105500 | Msa1202770 | -0.800238 | 1.583217e-48 | -8.615850e-47 |
Msa0249560 | Msa1202770 | -0.817987 | 2.479285e-52 | -8.615850e-47 |
Msa0253340 | Msa1202770 | -0.842406 | 2.637022e-58 | -8.615850e-47 |
Msa0260270 | Msa1202770 | 0.812143 | 4.917634e-51 | -8.615850e-47 |
Msa0268090 | Msa1202770 | -0.813633 | 2.318749e-51 | -8.615850e-47 |
Msa0285450 | Msa1202770 | -0.802311 | 5.959521e-49 | -8.615850e-47 |
Msa0292170 | Msa1202770 | -0.858038 | 1.083267e-62 | -8.615850e-47 |
Msa0302580 | Msa1202770 | 0.839523 | 1.506417e-57 | -8.615850e-47 |
Msa0306210 | Msa1202770 | 0.872636 | 2.730830e-67 | -8.615850e-47 |
Msa0315290 | Msa1202770 | -0.829832 | 4.127594e-55 | -8.615850e-47 |
Msa0317720 | Msa1202770 | -0.805141 | 1.540391e-49 | -8.615850e-47 |
Msa0319170 | Msa1202770 | -0.817795 | 2.740027e-52 | -8.615850e-47 |
Msa0326520 | Msa1202770 | -0.803804 | 2.927052e-49 | -8.615850e-47 |
Msa0330390 | Msa1202770 | -0.820126 | 8.087637e-53 | -8.615850e-47 |
Msa0338000 | Msa1202770 | -0.807584 | 4.705490e-50 | -8.615850e-47 |
Msa0340450 | Msa1202770 | -0.841997 | 3.384394e-58 | -8.615850e-47 |
Msa0344530 | Msa1202770 | -0.807969 | 3.897692e-50 | -8.615850e-47 |
Msa0344690 | Msa1202770 | 0.853907 | 1.751994e-61 | -8.615850e-47 |
Msa0347610 | Msa1202770 | -0.832845 | 7.492331e-56 | -8.615850e-47 |
Msa0350320 | Msa1202770 | 0.853303 | 2.611630e-61 | -8.615850e-47 |
Msa1116130 | Msa1202770 | 0.860662 | 1.766064e-63 | -8.615850e-47 |
Msa1121450 | Msa1202770 | 0.866231 | 3.317668e-65 | -8.615850e-47 |
Msa1124540 | Msa1202770 | 0.904337 | 1.364233e-79 | -8.615850e-47 |
Msa1130270 | Msa1202770 | 0.806637 | 7.468375e-50 | -8.615850e-47 |
Msa1139000 | Msa1202770 | 0.852559 | 4.263457e-61 | -8.615850e-47 |
Msa1143930 | Msa1202770 | 0.838462 | 2.834903e-57 | -8.615850e-47 |
Msa1144720 | Msa1202770 | 0.859504 | 3.952004e-63 | -8.615850e-47 |
Msa1156170 | Msa1202770 | 0.817316 | 3.513290e-52 | -8.615850e-47 |
Msa1156340 | Msa1202770 | 0.830690 | 2.548015e-55 | -8.615850e-47 |
Msa1162550 | Msa1202770 | 0.856133 | 3.951519e-62 | -8.615850e-47 |
Msa1163590 | Msa1202770 | 0.815791 | 7.715450e-52 | -8.615850e-47 |
Msa1166500 | Msa1202770 | 0.849955 | 2.319687e-60 | -8.615850e-47 |
Msa1168040 | Msa1202770 | 0.876898 | 9.678381e-69 | -8.615850e-47 |
Msa1174310 | Msa1202770 | -0.810239 | 1.272514e-50 | -8.615850e-47 |
Msa1183100 | Msa1202770 | 0.922555 | 8.446778e-89 | -8.615850e-47 |
Msa1202770 | Msa1207380 | -0.810448 | 1.147100e-50 | -8.615850e-47 |
Msa1202770 | Msa1207470 | 0.802620 | 5.144710e-49 | -8.615850e-47 |
Msa1202770 | Msa1210020 | -0.806438 | 8.225166e-50 | -8.615850e-47 |
Msa1202770 | Msa1211140 | 0.862416 | 5.148524e-64 | -8.615850e-47 |
Msa1202770 | Msa1211150 | 0.807604 | 4.660565e-50 | -8.615850e-47 |
Msa1202770 | Msa1217430 | 0.844825 | 5.947749e-59 | -8.615850e-47 |
Msa1202770 | Msa1224480 | -0.820565 | 6.413202e-53 | -8.615850e-47 |
Msa1202770 | Msa1224580 | 0.858520 | 7.786225e-63 | -8.615850e-47 |
Msa1202770 | Msa1225730 | 0.823383 | 1.427039e-53 | -8.615850e-47 |
Msa1202770 | Msa1229520 | 0.851567 | 8.161036e-61 | -8.615850e-47 |
Msa1202770 | Msa1233500 | -0.807691 | 4.467155e-50 | -8.615850e-47 |
Msa1202770 | Msa1235400 | -0.813456 | 2.536956e-51 | -8.615850e-47 |
Msa1202770 | Msa1243100 | -0.823150 | 1.617515e-53 | -8.615850e-47 |
Msa1202770 | Msa1244720 | 0.802562 | 5.288214e-49 | -8.615850e-47 |
Msa1202770 | Msa1255090 | 0.885140 | 1.050810e-71 | -8.615850e-47 |
Msa1202770 | Msa1257600 | -0.809984 | 1.444371e-50 | -8.615850e-47 |
Msa1202770 | Msa1257800 | 0.811448 | 6.966132e-51 | -8.615850e-47 |
Msa1202770 | Msa1258380 | 0.857170 | 1.958698e-62 | -8.615850e-47 |
Msa1202770 | Msa1259590 | 0.842640 | 2.286044e-58 | -8.615850e-47 |
Msa1202770 | Msa1263290 | 0.838971 | 2.094278e-57 | -8.615850e-47 |
Msa1202770 | Msa1265340 | 0.800648 | 1.305862e-48 | -8.615850e-47 |
Msa1202770 | Msa1267060 | -0.837487 | 5.049032e-57 | -8.615850e-47 |
Msa1202770 | Msa1271970 | 0.826970 | 2.025564e-54 | -8.615850e-47 |
Msa1202770 | Msa1295540 | 0.994738 | 8.944028e-210 | -8.615850e-47 |
Msa1202770 | Msa1298510 | -0.816977 | 4.186007e-52 | -8.615850e-47 |
Msa1202770 | Msa1299290 | 0.855830 | 4.848036e-62 | -8.615850e-47 |
Msa1202770 | Msa1299300 | 0.811005 | 8.692734e-51 | -8.615850e-47 |
Msa1202770 | Msa1302190 | 0.821477 | 3.954658e-53 | -8.615850e-47 |
Msa1202770 | Msa1305190 | -0.824232 | 9.025418e-54 | -8.615850e-47 |
Msa1202770 | Msa1305200 | -0.811806 | 5.823964e-51 | -8.615850e-47 |
Msa1202770 | Msa1305340 | -0.818988 | 1.470793e-52 | -8.615850e-47 |
Msa1202770 | Msa1305350 | -0.824627 | 7.285906e-54 | -8.615850e-47 |
Msa1202770 | Msa1305810 | -0.811440 | 6.992509e-51 | -8.615850e-47 |
Msa1202770 | Msa1307740 | -0.834476 | 2.931759e-56 | -8.615850e-47 |
Msa1202770 | Msa1310770 | 0.809338 | 1.987632e-50 | -8.615850e-47 |
Msa1202770 | Msa1314770 | -0.810437 | 1.153445e-50 | -8.615850e-47 |
Msa1202770 | Msa1322190 | -0.821000 | 5.094782e-53 | -8.615850e-47 |
Msa1202770 | Msa1325860 | 0.842118 | 3.142632e-58 | -8.615850e-47 |
Msa1202770 | Msa1332040 | 0.824306 | 8.670738e-54 | -8.615850e-47 |
Msa1202770 | Msa1335710 | -0.824025 | 1.009297e-53 | -8.615850e-47 |
Msa1202770 | Msa1348470 | 0.823196 | 1.577510e-53 | -8.615850e-47 |
Msa1202770 | Msa1359650 | 0.841659 | 4.156511e-58 | -8.615850e-47 |
Msa1202770 | Msa1364330 | 0.828716 | 7.700328e-55 | -8.615850e-47 |
Msa1202770 | Msa1373350 | -0.804824 | 1.794070e-49 | -8.615850e-47 |
Msa1202770 | Msa1373430 | 0.803939 | 2.743669e-49 | -8.615850e-47 |
Msa1202770 | Msa1376160 | 0.817428 | 3.314968e-52 | -8.615850e-47 |
Msa1202770 | Msa1376890 | -0.837266 | 5.754089e-57 | -8.615850e-47 |
Msa1202770 | Msa1393040 | -0.820184 | 7.845018e-53 | -8.615850e-47 |
Msa1202770 | Msa1394540 | -0.804403 | 2.197218e-49 | -8.615850e-47 |
Msa1202770 | Msa1395660 | -0.800233 | 1.586841e-48 | -8.615850e-47 |
Msa1202770 | Msa1401530 | -0.832349 | 9.947124e-56 | -8.615850e-47 |
Msa1202770 | Msa1403340 | -0.863620 | 2.186413e-64 | -8.615850e-47 |
Msa1202770 | Msa1403890 | -0.802767 | 4.798619e-49 | -8.615850e-47 |
Msa1202770 | Msa1404240 | 0.825608 | 4.272273e-54 | -8.615850e-47 |
Msa1202770 | Msa1416140 | 0.821254 | 4.451955e-53 | -8.615850e-47 |
Msa1202770 | Msa1417810 | 0.814578 | 1.434785e-51 | -8.615850e-47 |
Msa1202770 | Msa1440940 | -0.808605 | 2.852490e-50 | -8.615850e-47 |
Msa1202770 | Msa1444250 | 0.863519 | 2.349600e-64 | -8.615850e-47 |
Msa1202770 | Msa1445030 | -0.811518 | 6.724644e-51 | -8.615850e-47 |
Msa1202770 | Msa1445390 | 0.800855 | 1.185074e-48 | -8.615850e-47 |
Msa1202770 | Msa1445400 | 0.814501 | 1.492061e-51 | -8.615850e-47 |
Msa1202770 | Msa1445610 | 0.800578 | 1.349831e-48 | -8.615850e-47 |
Msa1202770 | Msa1449340 | 0.805482 | 1.306877e-49 | -8.615850e-47 |
Msa1202770 | Msa1449350 | 0.820804 | 5.650526e-53 | -8.615850e-47 |
Msa1202770 | Msa1451620 | 0.871931 | 4.691251e-67 | -8.615850e-47 |
Msa1202770 | Msa1459950 | -0.818296 | 2.111226e-52 | -8.615850e-47 |
Msa1202770 | Msa1461810 | 0.854207 | 1.435805e-61 | -8.615850e-47 |
Msa1202770 | Msa1462060 | -0.803081 | 4.133429e-49 | -8.615850e-47 |
Msa1202770 | Msa1462070 | -0.822279 | 2.579473e-53 | -8.615850e-47 |
Msa1202770 | Msa1464940 | -0.821486 | 3.936851e-53 | -8.615850e-47 |
Msa0485500 | Msa1202770 | 0.853513 | 2.274649e-61 | -8.615850e-47 |
Msa0489610 | Msa1202770 | -0.814396 | 1.573638e-51 | -8.615850e-47 |
Msa0521740 | Msa1202770 | -0.821661 | 3.586102e-53 | -8.615850e-47 |
Msa0532810 | Msa1202770 | 0.851487 | 8.594106e-61 | -8.615850e-47 |
Msa0534730 | Msa1202770 | -0.800100 | 1.688900e-48 | -8.615850e-47 |
Msa0536220 | Msa1202770 | -0.829370 | 5.345799e-55 | -8.615850e-47 |
Msa0538600 | Msa1202770 | -0.806486 | 8.036485e-50 | -8.615850e-47 |
Msa0553460 | Msa1202770 | -0.829020 | 6.500492e-55 | -8.615850e-47 |
Msa0555020 | Msa1202770 | -0.823989 | 1.028916e-53 | -8.615850e-47 |
Msa0558690 | Msa1202770 | -0.815465 | 9.117193e-52 | -8.615850e-47 |
Msa0567020 | Msa1202770 | -0.809998 | 1.433839e-50 | -8.615850e-47 |
Msa0585230 | Msa1202770 | -0.821967 | 3.046496e-53 | -8.615850e-47 |
Msa0598830 | Msa1202770 | 0.837992 | 3.745818e-57 | -8.615850e-47 |
Msa0599890 | Msa1202770 | -0.822096 | 2.844258e-53 | -8.615850e-47 |
Msa0842650 | Msa1202770 | -0.814262 | 1.684988e-51 | -8.615850e-47 |
Msa0843250 | Msa1202770 | -0.821960 | 3.058268e-53 | -8.615850e-47 |
Msa0844490 | Msa1202770 | -0.816371 | 5.725405e-52 | -8.615850e-47 |
Msa0857640 | Msa1202770 | -0.810850 | 9.390396e-51 | -8.615850e-47 |
Msa0862110 | Msa1202770 | -0.803982 | 2.688008e-49 | -8.615850e-47 |
Msa0864470 | Msa1202770 | 0.870929 | 1.006557e-66 | -8.615850e-47 |
Msa0865510 | Msa1202770 | 0.820865 | 5.472486e-53 | -8.615850e-47 |
Msa0876850 | Msa1202770 | 0.841705 | 4.040515e-58 | -8.615850e-47 |
Msa0891600 | Msa1202770 | 0.821068 | 4.914840e-53 | -8.615850e-47 |
Msa0910980 | Msa1202770 | 0.800303 | 1.535365e-48 | -8.615850e-47 |
Msa0913480 | Msa1202770 | 0.825185 | 5.380562e-54 | -8.615850e-47 |
Msa0927380 | Msa1202770 | -0.805285 | 1.437202e-49 | -8.615850e-47 |
Msa0933100 | Msa1202770 | -0.801127 | 1.042705e-48 | -8.615850e-47 |
Msa0942080 | Msa1202770 | 0.864532 | 1.136768e-64 | -8.615850e-47 |
Msa0942550 | Msa1202770 | 0.881844 | 1.711819e-70 | -8.615850e-47 |
Msa0942560 | Msa1202770 | 0.875170 | 3.804469e-68 | -8.615850e-47 |
Msa0946280 | Msa1202770 | 0.812090 | 5.049054e-51 | -8.615850e-47 |
Msa0946690 | Msa1202770 | 0.845411 | 4.130753e-59 | -8.615850e-47 |
Msa0973100 | Msa1202770 | -0.809352 | 1.974099e-50 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1202770 | MtrunA17_Chr8g0373081 | 97.778 | 180 | 4 | 0 | 1 | 180 | 1 | 180 | 3.65e-126 | 352 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1202770 | AT3G51010.1 | 54.450 | 191 | 70 | 4 | 3 | 180 | 1 | 187 | 1.13e-61 | 189 |
Find 84 sgRNAs with CRISPR-Local
Find 222 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
GCTCCCTTGATTAGGCTTAT+TGG | 0.196474 | 8_1:+56426594 | None:intergenic |
TCTATGGCTTAAATTTATTT+AGG | 0.203158 | 8_1:-56425061 | Msa1202770:exon |
GGTGGGTGGCGGTGGGCCGC+TGG | 0.220759 | 8_1:+56427988 | None:intergenic |
GTTGCGTGCTTTCGTGTTAA+TGG | 0.250809 | 8_1:+56427930 | None:intergenic |
CTCCCTTGATTAGGCTTATT+GGG | 0.266061 | 8_1:+56426595 | None:intergenic |
AGACGGTTCAAATTATTAAT+TGG | 0.281969 | 8_1:+56424999 | None:intergenic |
TGGTTGGTGGTGGGTGGCGG+TGG | 0.302438 | 8_1:+56427980 | None:intergenic |
CTCTTGATGCTCCCTTGATT+AGG | 0.327155 | 8_1:+56426586 | None:intergenic |
GTCGTCCAGGGCCTTATGCT+TGG | 0.331141 | 8_1:-56426648 | Msa1202770:intron |
ATTAGGCTTATTGGGAAGTA+TGG | 0.347303 | 8_1:+56426603 | None:intergenic |
TTGCGTGCTTTCGTGTTAAT+GGG | 0.371163 | 8_1:+56427931 | None:intergenic |
TCTTCTTTGCAACCATCTTC+CGG | 0.379881 | 8_1:-56426868 | Msa1202770:CDS |
GTGGGTGGCGGTGGGCCGCT+GGG | 0.381686 | 8_1:+56427989 | None:intergenic |
CATATGATGTTAATATAAAC+AGG | 0.386772 | 8_1:+56424833 | None:intergenic |
GGTTGGTTGGTGGTGGGTGG+CGG | 0.389072 | 8_1:+56427977 | None:intergenic |
TCGTCCAGGGCCTTATGCTT+GGG | 0.393020 | 8_1:-56426647 | Msa1202770:intron |
GAGCGACGGTTGGTTGGTGG+TGG | 0.396754 | 8_1:+56427970 | None:intergenic |
CAAGCTAGCCCGCTTTCGAC+GGG | 0.400130 | 8_1:+56426753 | None:intergenic |
TAAGAAGGTAGAGCGTAAAA+TGG | 0.403135 | 8_1:-56425158 | Msa1202770:CDS |
ATGCAAGCTCACCGTGCATA+TGG | 0.410402 | 8_1:+56424795 | None:intergenic |
GGTGGTTTGCTGCCGGAAGA+TGG | 0.417214 | 8_1:+56426856 | None:intergenic |
GCTAATATATACCAGTATAA+AGG | 0.421466 | 8_1:+56426528 | None:intergenic |
GTTTATATTAACATCATATG+TGG | 0.425964 | 8_1:-56424830 | Msa1202770:three_prime_UTR |
GCTGTGAAAGTGGCTCAAAA+AGG | 0.426398 | 8_1:+56426819 | None:intergenic |
TCAAGCTAGCCCGCTTTCGA+CGG | 0.435563 | 8_1:+56426752 | None:intergenic |
TTGTTCTACTTTACTCTGGA+CGG | 0.447098 | 8_1:-56424864 | Msa1202770:three_prime_UTR |
TTATCAGAAGGTCGTCTCTT+GGG | 0.451983 | 8_1:+56426778 | None:intergenic |
AAGAGAGTGGGCAGAAAGAC+TGG | 0.452985 | 8_1:-56425119 | Msa1202770:CDS |
GCTTGGGTTGAACACACAAC+TGG | 0.459757 | 8_1:-56426631 | Msa1202770:CDS |
CTTCCCAATAAGCCTAATCA+AGG | 0.465217 | 8_1:-56426598 | Msa1202770:CDS |
AAAACTGACCTGAAAACTGA+TGG | 0.466997 | 8_1:+56427907 | None:intergenic |
TGATAAACCCCGTCGAAAGC+GGG | 0.471130 | 8_1:-56426761 | Msa1202770:CDS |
GGTTGGTGGTGGGTGGCGGT+GGG | 0.471297 | 8_1:+56427981 | None:intergenic |
GTGTGTTCAACCCAAGCATA+AGG | 0.483354 | 8_1:+56426637 | None:intergenic |
TGTTCTACTTTACTCTGGAC+GGG | 0.484769 | 8_1:-56424863 | Msa1202770:three_prime_UTR |
GCAGCGCCGTGCCTTTATAC+TGG | 0.484793 | 8_1:-56426539 | Msa1202770:intron |
TTTATCAGAAGGTCGTCTCT+TGG | 0.486620 | 8_1:+56426777 | None:intergenic |
GGAGAGCGACGGTTGGTTGG+TGG | 0.499459 | 8_1:+56427967 | None:intergenic |
GGCATTAACAATTGCAAATG+AGG | 0.499920 | 8_1:+56425037 | None:intergenic |
AGCGACGGTTGGTTGGTGGT+GGG | 0.500113 | 8_1:+56427971 | None:intergenic |
TCATTTGCAATTGTTAATGC+CGG | 0.509743 | 8_1:-56425035 | Msa1202770:three_prime_UTR |
TTTCGACGGGGTTTATCAGA+AGG | 0.512993 | 8_1:+56426766 | None:intergenic |
AGATTCGGAAGAGGAGTCCT+CGG | 0.513910 | 8_1:-56426973 | Msa1202770:CDS |
GCGGAAGAAGAACGTTAAGA+AGG | 0.519807 | 8_1:-56425173 | Msa1202770:CDS |
GAATTGGGGTGGTTTGCTGC+CGG | 0.523920 | 8_1:+56426849 | None:intergenic |
TGATCTCACTCTCGTCGTCA+AGG | 0.527754 | 8_1:-56426933 | Msa1202770:CDS |
CTCACTCTCGTCGTCAAGGA+CGG | 0.532447 | 8_1:-56426929 | Msa1202770:CDS |
TGTAGGCGGAAAAGAAGAAA+AGG | 0.538675 | 8_1:-56425219 | Msa1202770:intron |
TTTATATTAACATCATATGT+GGG | 0.541890 | 8_1:-56424829 | Msa1202770:three_prime_UTR |
AGAGGAGAGCGACGGTTGGT+TGG | 0.548202 | 8_1:+56427964 | None:intergenic |
GACGGTTGGTTGGTGGTGGG+TGG | 0.557346 | 8_1:+56427974 | None:intergenic |
TGTTGCTGTGAGAAAGAAGA+AGG | 0.560710 | 8_1:+56428016 | None:intergenic |
TGTCTGTCAAGCTGTGAAAG+TGG | 0.568033 | 8_1:+56426809 | None:intergenic |
GTAAAATGGCTGCAGTTGCA+AGG | 0.569157 | 8_1:-56425144 | Msa1202770:CDS |
GAGGAGAGGAGAGCGACGGT+TGG | 0.573324 | 8_1:+56427960 | None:intergenic |
CTGATAAACCCCGTCGAAAG+CGG | 0.575794 | 8_1:-56426762 | Msa1202770:CDS |
TAAAATGGCTGCAGTTGCAA+GGG | 0.587269 | 8_1:-56425143 | Msa1202770:CDS |
GGTTGCAAAGAAGAATGAAA+CGG | 0.590402 | 8_1:+56426877 | None:intergenic |
GATTCGGAAGAGGAGTCCTC+GGG | 0.593998 | 8_1:-56426972 | Msa1202770:CDS |
GGTTGAATTGCAGCGCCTTG+AGG | 0.594805 | 8_1:-56425098 | Msa1202770:CDS |
AGTTGCAAGGGAAAGAGAGT+GGG | 0.599831 | 8_1:-56425131 | Msa1202770:CDS |
AAACTGACCTGAAAACTGAT+GGG | 0.600952 | 8_1:+56427908 | None:intergenic |
TCGTGTTAATGGGCTGAGAG+AGG | 0.602161 | 8_1:+56427941 | None:intergenic |
GAAGATATAGTATGTGTAGA+CGG | 0.603025 | 8_1:+56424982 | None:intergenic |
CTCAGATGCAAGAGGCTAAG+CGG | 0.604543 | 8_1:-56425192 | Msa1202770:CDS |
CAGTTGCAAGGGAAAGAGAG+TGG | 0.605780 | 8_1:-56425132 | Msa1202770:CDS |
ACGACGAGAGTGAGATCAGA+GGG | 0.612151 | 8_1:+56426938 | None:intergenic |
TTTAGATCTGTCCATATGCA+CGG | 0.618218 | 8_1:-56424806 | Msa1202770:three_prime_UTR |
TCTTCTTTCTCACAGCAACA+CGG | 0.624449 | 8_1:-56428013 | Msa1202770:five_prime_UTR |
GAGAGAGGAGAGGAGAGCGA+CGG | 0.630646 | 8_1:+56427956 | None:intergenic |
TTCCCAATAAGCCTAATCAA+GGG | 0.632102 | 8_1:-56426597 | Msa1202770:CDS |
CTAATCAAGGGAGCATCAAG+AGG | 0.644871 | 8_1:-56426585 | Msa1202770:CDS |
TATATACCAGTATAAAGGCA+CGG | 0.647751 | 8_1:+56426533 | None:intergenic |
AAGGAAAGCTCAGATGCAAG+AGG | 0.649661 | 8_1:-56425200 | Msa1202770:CDS |
AAGCTAGCCCGCTTTCGACG+GGG | 0.650879 | 8_1:+56426754 | None:intergenic |
AGAATGAAACGGCAATGTGG+AGG | 0.653637 | 8_1:+56426888 | None:intergenic |
AAGGGAAGAAGGAATTGGGG+TGG | 0.654054 | 8_1:+56426838 | None:intergenic |
ATCAAGGGAGCATCAAGAGG+AGG | 0.654645 | 8_1:-56426582 | Msa1202770:CDS |
GGAATGAGAAGAAACGCATG+AGG | 0.662356 | 8_1:-56426561 | Msa1202770:CDS |
AGAAGAATGAAACGGCAATG+TGG | 0.685252 | 8_1:+56426885 | None:intergenic |
GACGACGAGAGTGAGATCAG+AGG | 0.687668 | 8_1:+56426937 | None:intergenic |
TTAATGGGCTGAGAGAGGAG+AGG | 0.693145 | 8_1:+56427946 | None:intergenic |
TCACAGCAACACGGACCCAG+CGG | 0.694597 | 8_1:-56428004 | Msa1202770:five_prime_UTR |
GAGGGCGTAAAACATTCCCG+AGG | 0.745952 | 8_1:+56426956 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | ATATATAAAATGAAATTAAG+TGG | + | chr8_1:56426343-56426362 | None:intergenic | 10.0% |
!!! | TTAATTTCATTTTATATATC+AGG | - | chr8_1:56426344-56426363 | Msa1202770:intron | 10.0% |
!!! | TTCATTTTTTTAAAAAGAAT+AGG | + | chr8_1:56427461-56427480 | None:intergenic | 10.0% |
!! | TATCAATATAAAATCAACAA+AGG | + | chr8_1:56425134-56425153 | None:intergenic | 15.0% |
!! | AATGTAATTAATTGTTTGTT+AGG | - | chr8_1:56425526-56425545 | Msa1202770:intron | 15.0% |
!! | TAAATTATACATAGAAGTTT+AGG | - | chr8_1:56426671-56426690 | Msa1202770:intron | 15.0% |
!! | TATTTAACATAAACTAATCT+TGG | - | chr8_1:56426813-56426832 | Msa1202770:CDS | 15.0% |
!! | AATGAACATACAATTATATT+AGG | + | chr8_1:56427592-56427611 | None:intergenic | 15.0% |
!! | TAATATAATTGTATGTTCAT+TGG | - | chr8_1:56427591-56427610 | Msa1202770:intron | 15.0% |
!! | AATATAATTGTATGTTCATT+GGG | - | chr8_1:56427592-56427611 | Msa1202770:intron | 15.0% |
!! | TTTATATTAACATCATATGT+GGG | - | chr8_1:56428017-56428036 | Msa1202770:five_prime_UTR | 15.0% |
!! | TTATGAAGAATAATTGAATC+AGG | - | chr8_1:56425097-56425116 | Msa1202770:CDS | 20.0% |
!! | CTCTCACAAAAAAAAAAAAA+AGG | + | chr8_1:56425339-56425358 | None:intergenic | 20.0% |
!!! | TGAGTTGATTATAAAAAACA+AGG | + | chr8_1:56425765-56425784 | None:intergenic | 20.0% |
!! | TCAGAGAAAAATTTGTATAT+TGG | - | chr8_1:56425821-56425840 | Msa1202770:intron | 20.0% |
!! | TATGAGTTTCATTTAAATCT+TGG | + | chr8_1:56427082-56427101 | None:intergenic | 20.0% |
!!! | TTTCTATTTTGTGGTTATTA+TGG | + | chr8_1:56427164-56427183 | None:intergenic | 20.0% |
!!! | ACTTTCTTATTTCTATTTTG+TGG | + | chr8_1:56427173-56427192 | None:intergenic | 20.0% |
!! | AAAAAATGAAAGTTTCTCTA+TGG | - | chr8_1:56427471-56427490 | Msa1202770:intron | 20.0% |
!!! | AATTCTTCTATAAGGAATTT+TGG | + | chr8_1:56427504-56427523 | None:intergenic | 20.0% |
!! | AAAGTTCAAATTCTTCTATA+AGG | + | chr8_1:56427512-56427531 | None:intergenic | 20.0% |
!! | TTATAGAAGAATTTGAACTT+TGG | - | chr8_1:56427511-56427530 | Msa1202770:intron | 20.0% |
!! | TCTATGGCTTAAATTTATTT+AGG | - | chr8_1:56427785-56427804 | Msa1202770:intron | 20.0% |
!! | CATATGATGTTAATATAAAC+AGG | + | chr8_1:56428016-56428035 | None:intergenic | 20.0% |
!! | GTTTATATTAACATCATATG+TGG | - | chr8_1:56428016-56428035 | Msa1202770:five_prime_UTR | 20.0% |
!!! | TGAAATTGATTTTAGCCTTT+AGG | - | chr8_1:56425053-56425072 | Msa1202770:exon | 25.0% |
!! | AAAATAAGGCATTTATGAGT+TGG | - | chr8_1:56425432-56425451 | Msa1202770:intron | 25.0% |
! | GCTGAAAAACTAAATGTAAT+TGG | - | chr8_1:56425677-56425696 | Msa1202770:intron | 25.0% |
! | AGCTGAAAAAACTATTGAAT+CGG | - | chr8_1:56425714-56425733 | Msa1202770:intron | 25.0% |
!!! | TCATACATTTTTAGTTCGTT+AGG | - | chr8_1:56425782-56425801 | Msa1202770:intron | 25.0% |
! | GCTAATATATACCAGTATAA+AGG | + | chr8_1:56426321-56426340 | None:intergenic | 25.0% |
! | CTTTGTGAATATTGTTTACT+AGG | - | chr8_1:56426447-56426466 | Msa1202770:intron | 25.0% |
! | TTCATGGAGTATAAACTATA+AGG | - | chr8_1:56426483-56426502 | Msa1202770:intron | 25.0% |
! | TCACAAAAGTTGTCAAAAAA+TGG | - | chr8_1:56426764-56426783 | Msa1202770:CDS | 25.0% |
! | TTGACCTATATGTATGTTTA+AGG | - | chr8_1:56427207-56427226 | Msa1202770:intron | 25.0% |
! | GATACCTTAAACATACATAT+AGG | + | chr8_1:56427214-56427233 | None:intergenic | 25.0% |
!! | TGTTATTCTAGCTATGTATT+AGG | - | chr8_1:56427392-56427411 | Msa1202770:intron | 25.0% |
!! | GTTATTCTAGCTATGTATTA+GGG | - | chr8_1:56427393-56427412 | Msa1202770:intron | 25.0% |
!! | AATAGGACATGTATTTTGTT+AGG | + | chr8_1:56427444-56427463 | None:intergenic | 25.0% |
! | AGACGGTTCAAATTATTAAT+TGG | + | chr8_1:56427850-56427869 | None:intergenic | 25.0% |
!! | TTTTATGTTGTCTGATGATT+GGG | - | chr8_1:56427893-56427912 | Msa1202770:intron | 25.0% |
! | GTAGAACAAAAACAAAAGTA+AGG | + | chr8_1:56427971-56427990 | None:intergenic | 25.0% |
GTAGTGAAAGTAATTGAATC+AGG | - | chr8_1:56424989-56425008 | Msa1202770:three_prime_UTR | 30.0% | |
TTTCAGTAACGAAAACCTAA+AGG | + | chr8_1:56425071-56425090 | None:intergenic | 30.0% | |
!! | ATATTGATAGTGTAGTAACC+CGG | - | chr8_1:56425145-56425164 | Msa1202770:CDS | 30.0% |
TCCAGAATATATGATCCATT+TGG | - | chr8_1:56425360-56425379 | Msa1202770:intron | 30.0% | |
CCAGAATATATGATCCATTT+GGG | - | chr8_1:56425361-56425380 | Msa1202770:intron | 30.0% | |
! | AGGAAGTTGAGTAATTTTCA+CGG | - | chr8_1:56425397-56425416 | Msa1202770:intron | 30.0% |
! | TTATGAGTTGGATATTCCAA+CGG | - | chr8_1:56425444-56425463 | Msa1202770:intron | 30.0% |
TGATTTGAGCTTAAGGTTAA+CGG | + | chr8_1:56425578-56425597 | None:intergenic | 30.0% | |
!! | TCTCAATTGATTTGAGCTTA+AGG | + | chr8_1:56425585-56425604 | None:intergenic | 30.0% |
TATAATTGATGCAGCAGAAT+CGG | - | chr8_1:56425641-56425660 | Msa1202770:intron | 30.0% | |
!! | TTGTATATTGGTGATGTTGT+AGG | - | chr8_1:56425833-56425852 | Msa1202770:intron | 30.0% |
TATATACCAGTATAAAGGCA+CGG | + | chr8_1:56426316-56426335 | None:intergenic | 30.0% | |
AGGAAACATATCATCTTTCA+TGG | - | chr8_1:56426467-56426486 | Msa1202770:intron | 30.0% | |
ATACATAGAAGTTTAGGTAG+TGG | - | chr8_1:56426677-56426696 | Msa1202770:intron | 30.0% | |
CAATAGAAAGAGAAAGTAGA+AGG | - | chr8_1:56426714-56426733 | Msa1202770:intron | 30.0% | |
ATAACAGCAAAGAAAACATG+AGG | + | chr8_1:56426880-56426899 | None:intergenic | 30.0% | |
ATACTTGTGAACGATAGATA+AGG | - | chr8_1:56426931-56426950 | Msa1202770:CDS | 30.0% | |
GGTTATTATGGCTATAAGTA+TGG | + | chr8_1:56427152-56427171 | None:intergenic | 30.0% | |
ATGTTTATCCAAAGACCATT+TGG | + | chr8_1:56427548-56427567 | None:intergenic | 30.0% | |
GATAAACATAACTGTGATCA+TGG | - | chr8_1:56427559-56427578 | Msa1202770:intron | 30.0% | |
TCATTTGCAATTGTTAATGC+CGG | - | chr8_1:56427811-56427830 | Msa1202770:intron | 30.0% | |
GAAGATATAGTATGTGTAGA+CGG | + | chr8_1:56427867-56427886 | None:intergenic | 30.0% | |
! | GTTTTATGTTGTCTGATGAT+TGG | - | chr8_1:56427892-56427911 | Msa1202770:intron | 30.0% |
GAACAAAAACAAAAGTAAGG+CGG | + | chr8_1:56427968-56427987 | None:intergenic | 30.0% | |
! | GTTTTTGTTCTACTTTACTC+TGG | - | chr8_1:56427978-56427997 | Msa1202770:five_prime_UTR | 30.0% |
AAACTGACCTGAAAACTGAT+GGG | + | chr8_1:56424941-56424960 | None:intergenic | 35.0% | |
AAAACTGACCTGAAAACTGA+TGG | + | chr8_1:56424942-56424961 | None:intergenic | 35.0% | |
!! | TATTGATAGTGTAGTAACCC+GGG | - | chr8_1:56425146-56425165 | Msa1202770:CDS | 35.0% |
ATACCAAGTGAACATGTCTA+GGG | - | chr8_1:56425217-56425236 | Msa1202770:CDS | 35.0% | |
!! | AAGCATCGACTTCTCAAATT+TGG | + | chr8_1:56425269-56425288 | None:intergenic | 35.0% |
CCCAAATGGATCATATATTC+TGG | + | chr8_1:56425364-56425383 | None:intergenic | 35.0% | |
TATATGATCCATTTGGGTGA+AGG | - | chr8_1:56425367-56425386 | Msa1202770:intron | 35.0% | |
TATATCATCCTTCACCCAAA+TGG | + | chr8_1:56425378-56425397 | None:intergenic | 35.0% | |
ATTTGGGTGAAGGATGATAT+AGG | - | chr8_1:56425377-56425396 | Msa1202770:intron | 35.0% | |
! | AGTAATTTTCACGGCTTCAA+AGG | - | chr8_1:56425406-56425425 | Msa1202770:intron | 35.0% |
! | GTAATTTTCACGGCTTCAAA+GGG | - | chr8_1:56425407-56425426 | Msa1202770:intron | 35.0% |
GGCTTCAAAGGGTAAAAATA+AGG | - | chr8_1:56425418-56425437 | Msa1202770:intron | 35.0% | |
TTCATCATGATACTAACCGT+TGG | + | chr8_1:56425463-56425482 | None:intergenic | 35.0% | |
GATGAATTAGTTGAGAGACT+TGG | - | chr8_1:56425477-56425496 | Msa1202770:intron | 35.0% | |
TGGTCAAGTTCTATGTAAAG+TGG | - | chr8_1:56425497-56425516 | Msa1202770:intron | 35.0% | |
! | AATATTTTTCTCCTTCGTCC+AGG | - | chr8_1:56425551-56425570 | Msa1202770:intron | 35.0% |
TGAATCGGTGTAGATTACTA+TGG | - | chr8_1:56425729-56425748 | Msa1202770:intron | 35.0% | |
GTGTAGATTACTATGGTGAA+TGG | - | chr8_1:56425736-56425755 | Msa1202770:intron | 35.0% | |
TGCACGAGAAAAATGAGATT+CGG | - | chr8_1:56425858-56425877 | Msa1202770:intron | 35.0% | |
AGAAAAATGAGATTCGGAAG+AGG | - | chr8_1:56425864-56425883 | Msa1202770:intron | 35.0% | |
GGTTGCAAAGAAGAATGAAA+CGG | + | chr8_1:56425972-56425991 | None:intergenic | 35.0% | |
AAAAAGGGAAGAAGGAATTG+GGG | + | chr8_1:56426014-56426033 | None:intergenic | 35.0% | |
CAAAAAGGGAAGAAGGAATT+GGG | + | chr8_1:56426015-56426034 | None:intergenic | 35.0% | |
TCAAAAAGGGAAGAAGGAAT+TGG | + | chr8_1:56426016-56426035 | None:intergenic | 35.0% | |
ATTAGGCTTATTGGGAAGTA+TGG | + | chr8_1:56426246-56426265 | None:intergenic | 35.0% | |
TTCCCAATAAGCCTAATCAA+GGG | - | chr8_1:56426249-56426268 | Msa1202770:intron | 35.0% | |
GACTCACACATGTAAATCAA+AGG | + | chr8_1:56426399-56426418 | None:intergenic | 35.0% | |
AACTATAAGGTGCATGAGTT+TGG | - | chr8_1:56426496-56426515 | Msa1202770:intron | 35.0% | |
CAACAAGTTGTCACAAGAAA+GGG | + | chr8_1:56426645-56426664 | None:intergenic | 35.0% | |
!! | AGAAGTACTAGTGTTTGTGA+TGG | + | chr8_1:56427020-56427039 | None:intergenic | 35.0% |
AATCTTGGACCATCTGTATT+GGG | + | chr8_1:56427067-56427086 | None:intergenic | 35.0% | |
AAATCTTGGACCATCTGTAT+TGG | + | chr8_1:56427068-56427087 | None:intergenic | 35.0% | |
ATAAGAAAGTGACAACTGAG+AGG | - | chr8_1:56427183-56427202 | Msa1202770:intron | 35.0% | |
CATACTATCATACCAGTATG+TGG | - | chr8_1:56427233-56427252 | Msa1202770:intron | 35.0% | |
AAGTGTCAACTAAAGCTAGA+AGG | - | chr8_1:56427294-56427313 | Msa1202770:intron | 35.0% | |
! | ATTCTAGCTATGTATTAGGG+AGG | - | chr8_1:56427396-56427415 | Msa1202770:intron | 35.0% |
TTGGTTGTATATCAGCCAAA+TGG | - | chr8_1:56427530-56427549 | Msa1202770:intron | 35.0% | |
TATATCAGCCAAATGGTCTT+TGG | - | chr8_1:56427537-56427556 | Msa1202770:intron | 35.0% | |
!!! | TTGGGAACTTTTTTGCATGT+AGG | - | chr8_1:56427610-56427629 | Msa1202770:intron | 35.0% |
TAAGAAGGTAGAGCGTAAAA+TGG | - | chr8_1:56427688-56427707 | Msa1202770:intron | 35.0% | |
!! | ACTTTTTCTTCTCTTCCTCA+AGG | + | chr8_1:56427766-56427785 | None:intergenic | 35.0% |
GGAAGAGAAGAAAAAGTCTA+TGG | - | chr8_1:56427769-56427788 | Msa1202770:intron | 35.0% | |
GGCATTAACAATTGCAAATG+AGG | + | chr8_1:56427812-56427831 | None:intergenic | 35.0% | |
! | TTAATGCCGGTCAAGTTTTT+GGG | - | chr8_1:56427824-56427843 | Msa1202770:intron | 35.0% |
TTGTTCTACTTTACTCTGGA+CGG | - | chr8_1:56427982-56428001 | Msa1202770:five_prime_UTR | 35.0% | |
TTTAGATCTGTCCATATGCA+CGG | - | chr8_1:56428040-56428059 | Msa1202770:five_prime_UTR | 35.0% | |
TGTTGCTGTGAGAAAGAAGA+AGG | + | chr8_1:56424833-56424852 | None:intergenic | 40.0% | |
TCTTCTTTCTCACAGCAACA+CGG | - | chr8_1:56424833-56424852 | Msa1202770:three_prime_UTR | 40.0% | |
TTGCGTGCTTTCGTGTTAAT+GGG | + | chr8_1:56424918-56424937 | None:intergenic | 40.0% | |
TCTTCGCATATTTCATAGCC+CGG | + | chr8_1:56425167-56425186 | None:intergenic | 40.0% | |
CTAGACATGTTCACTTGGTA+TGG | + | chr8_1:56425218-56425237 | None:intergenic | 40.0% | |
CATACCAAGTGAACATGTCT+AGG | - | chr8_1:56425216-56425235 | Msa1202770:CDS | 40.0% | |
TCTATCACTCCATTAGACAG+TGG | + | chr8_1:56425296-56425315 | None:intergenic | 40.0% | |
AGAAGAATGAAACGGCAATG+TGG | + | chr8_1:56425964-56425983 | None:intergenic | 40.0% | |
TCTTCTTTGCAACCATCTTC+CGG | - | chr8_1:56425978-56425997 | Msa1202770:intron | 40.0% | |
CTGTGAAAGTGGCTCAAAAA+GGG | + | chr8_1:56426029-56426048 | None:intergenic | 40.0% | |
TTATCAGAAGGTCGTCTCTT+GGG | + | chr8_1:56426071-56426090 | None:intergenic | 40.0% | |
TTTATCAGAAGGTCGTCTCT+TGG | + | chr8_1:56426072-56426091 | None:intergenic | 40.0% | |
TTATGATGAACTTGTCGTCC+AGG | - | chr8_1:56426185-56426204 | Msa1202770:intron | 40.0% | |
TATGATGAACTTGTCGTCCA+GGG | - | chr8_1:56426186-56426205 | Msa1202770:intron | 40.0% | |
CTTCCCAATAAGCCTAATCA+AGG | - | chr8_1:56426248-56426267 | Msa1202770:intron | 40.0% | |
CTCCCTTGATTAGGCTTATT+GGG | + | chr8_1:56426254-56426273 | None:intergenic | 40.0% | |
!! | TTTGGAACAAAGGTGTTGTC+TGG | - | chr8_1:56426514-56426533 | Msa1202770:intron | 40.0% |
CCAACAAGTTGTCACAAGAA+AGG | + | chr8_1:56426646-56426665 | None:intergenic | 40.0% | |
CCTTTCTTGTGACAACTTGT+TGG | - | chr8_1:56426643-56426662 | Msa1202770:intron | 40.0% | |
!! | GTTATGAGAGAGCATCAAGA+TGG | + | chr8_1:56426839-56426858 | None:intergenic | 40.0% |
!! | CACAGTGAAAGCATCTTTAG+AGG | - | chr8_1:56426967-56426986 | Msa1202770:CDS | 40.0% |
!! | GGGTAATGGAGTTAGGTTTA+TGG | + | chr8_1:56427047-56427066 | None:intergenic | 40.0% |
!! | CTGTATTGGGTAATGGAGTT+AGG | + | chr8_1:56427054-56427073 | None:intergenic | 40.0% |
ACTCCATTACCCAATACAGA+TGG | - | chr8_1:56427055-56427074 | Msa1202770:intron | 40.0% | |
ACAGCCAATTATTTGCCACA+GGG | + | chr8_1:56427273-56427292 | None:intergenic | 40.0% | |
!!! | GGAACTTTTTTGCATGTAGG+CGG | - | chr8_1:56427613-56427632 | Msa1202770:intron | 40.0% |
TGTAGGCGGAAAAGAAGAAA+AGG | - | chr8_1:56427627-56427646 | Msa1202770:intron | 40.0% | |
TAAAATGGCTGCAGTTGCAA+GGG | - | chr8_1:56427703-56427722 | Msa1202770:intron | 40.0% | |
! | GTTAATGCCGGTCAAGTTTT+TGG | - | chr8_1:56427823-56427842 | Msa1202770:intron | 40.0% |
AATTGGCCCAAAAACTTGAC+CGG | + | chr8_1:56427833-56427852 | None:intergenic | 40.0% | |
TGTTCTACTTTACTCTGGAC+GGG | - | chr8_1:56427983-56428002 | Msa1202770:five_prime_UTR | 40.0% | |
GTTGCGTGCTTTCGTGTTAA+TGG | + | chr8_1:56424919-56424938 | None:intergenic | 45.0% | |
CTTCGCATATTTCATAGCCC+GGG | + | chr8_1:56425166-56425185 | None:intergenic | 45.0% | |
TGCTTTCTGCCACTGTCTAA+TGG | - | chr8_1:56425284-56425303 | Msa1202770:intron | 45.0% | |
AGAATGAAACGGCAATGTGG+AGG | + | chr8_1:56425961-56425980 | None:intergenic | 45.0% | |
AGTGGCTCAAAAAGGGAAGA+AGG | + | chr8_1:56426022-56426041 | None:intergenic | 45.0% | |
GCTGTGAAAGTGGCTCAAAA+AGG | + | chr8_1:56426030-56426049 | None:intergenic | 45.0% | |
TGTCTGTCAAGCTGTGAAAG+TGG | + | chr8_1:56426040-56426059 | None:intergenic | 45.0% | |
TTTCGACGGGGTTTATCAGA+AGG | + | chr8_1:56426083-56426102 | None:intergenic | 45.0% | |
GTGTGTTCAACCCAAGCATA+AGG | + | chr8_1:56426212-56426231 | None:intergenic | 45.0% | |
GCTCCCTTGATTAGGCTTAT+TGG | + | chr8_1:56426255-56426274 | None:intergenic | 45.0% | |
CTCTTGATGCTCCCTTGATT+AGG | + | chr8_1:56426263-56426282 | None:intergenic | 45.0% | |
!! | CTAATCAAGGGAGCATCAAG+AGG | - | chr8_1:56426261-56426280 | Msa1202770:intron | 45.0% |
GGAATGAGAAGAAACGCATG+AGG | - | chr8_1:56426285-56426304 | Msa1202770:intron | 45.0% | |
! | GGTGCATGAGTTTGGAACAA+AGG | - | chr8_1:56426504-56426523 | Msa1202770:intron | 45.0% |
!! | AACAAAGGTGTTGTCTGGAG+TGG | - | chr8_1:56426519-56426538 | Msa1202770:intron | 45.0% |
GGACCATCTGTATTGGGTAA+TGG | + | chr8_1:56427061-56427080 | None:intergenic | 45.0% | |
CAGTAATACGGACCACATAC+TGG | + | chr8_1:56427248-56427267 | None:intergenic | 45.0% | |
AGCCAATTATTTGCCACAGG+GGG | + | chr8_1:56427271-56427290 | None:intergenic | 45.0% | |
CAGCCAATTATTTGCCACAG+GGG | + | chr8_1:56427272-56427291 | None:intergenic | 45.0% | |
GACAGCCAATTATTTGCCAC+AGG | + | chr8_1:56427274-56427293 | None:intergenic | 45.0% | |
TACAACTTCACAATGCGCTG+AGG | - | chr8_1:56427326-56427345 | Msa1202770:intron | 45.0% | |
GCGCTGAGGCTAAATTGATT+TGG | - | chr8_1:56427340-56427359 | Msa1202770:intron | 45.0% | |
AGCAGCAGCTGACAGATAAA+TGG | + | chr8_1:56427372-56427391 | None:intergenic | 45.0% | |
AAGGAAAGCTCAGATGCAAG+AGG | - | chr8_1:56427646-56427665 | Msa1202770:intron | 45.0% | |
GCGGAAGAAGAACGTTAAGA+AGG | - | chr8_1:56427673-56427692 | Msa1202770:intron | 45.0% | |
GTAAAATGGCTGCAGTTGCA+AGG | - | chr8_1:56427702-56427721 | Msa1202770:intron | 45.0% | |
AGTTGCAAGGGAAAGAGAGT+GGG | - | chr8_1:56427715-56427734 | Msa1202770:intron | 45.0% | |
!! | TTAATGGGCTGAGAGAGGAG+AGG | + | chr8_1:56424903-56424922 | None:intergenic | 50.0% |
!! | TCGTGTTAATGGGCTGAGAG+AGG | + | chr8_1:56424908-56424927 | None:intergenic | 50.0% |
! | CACGCAACCCATCAGTTTTC+AGG | - | chr8_1:56424931-56424950 | Msa1202770:three_prime_UTR | 50.0% |
CGTCCCTAGACATGTTCACT+TGG | + | chr8_1:56425223-56425242 | None:intergenic | 50.0% | |
! | GAGCTTAAGGTTAACGGACC+TGG | + | chr8_1:56425572-56425591 | None:intergenic | 50.0% |
AGATTCGGAAGAGGAGTCCT+CGG | - | chr8_1:56425873-56425892 | Msa1202770:intron | 50.0% | |
ACGACGAGAGTGAGATCAGA+GGG | + | chr8_1:56425911-56425930 | None:intergenic | 50.0% | |
TGATCTCACTCTCGTCGTCA+AGG | - | chr8_1:56425913-56425932 | Msa1202770:intron | 50.0% | |
AAGGGAAGAAGGAATTGGGG+TGG | + | chr8_1:56426011-56426030 | None:intergenic | 50.0% | |
CTGATAAACCCCGTCGAAAG+CGG | - | chr8_1:56426084-56426103 | Msa1202770:intron | 50.0% | |
TGATAAACCCCGTCGAAAGC+GGG | - | chr8_1:56426085-56426104 | Msa1202770:intron | 50.0% | |
!! | GCTTGGGTTGAACACACAAC+TGG | - | chr8_1:56426215-56426234 | Msa1202770:intron | 50.0% |
!! | ATCAAGGGAGCATCAAGAGG+AGG | - | chr8_1:56426264-56426283 | Msa1202770:intron | 50.0% |
TGCCCCCTGTGGCAAATAAT+TGG | - | chr8_1:56427266-56427285 | Msa1202770:intron | 50.0% | |
CTCAGATGCAAGAGGCTAAG+CGG | - | chr8_1:56427654-56427673 | Msa1202770:intron | 50.0% | |
CAGTTGCAAGGGAAAGAGAG+TGG | - | chr8_1:56427714-56427733 | Msa1202770:intron | 50.0% | |
AAGAGAGTGGGCAGAAAGAC+TGG | - | chr8_1:56427727-56427746 | Msa1202770:intron | 50.0% | |
ATGCAAGCTCACCGTGCATA+TGG | + | chr8_1:56428054-56428073 | None:intergenic | 50.0% | |
! | AGGTTAACGGACCTGGACGA+AGG | + | chr8_1:56425565-56425584 | None:intergenic | 55.0% |
GATTCGGAAGAGGAGTCCTC+GGG | - | chr8_1:56425874-56425893 | Msa1202770:intron | 55.0% | |
! | GAGGGCGTAAAACATTCCCG+AGG | + | chr8_1:56425893-56425912 | None:intergenic | 55.0% |
GACGACGAGAGTGAGATCAG+AGG | + | chr8_1:56425912-56425931 | None:intergenic | 55.0% | |
CTCACTCTCGTCGTCAAGGA+CGG | - | chr8_1:56425917-56425936 | Msa1202770:intron | 55.0% | |
!! | GAATTGGGGTGGTTTGCTGC+CGG | + | chr8_1:56426000-56426019 | None:intergenic | 55.0% |
TCAAGCTAGCCCGCTTTCGA+CGG | + | chr8_1:56426097-56426116 | None:intergenic | 55.0% | |
AAGCAACGCAACGCACCAGA+GGG | + | chr8_1:56426122-56426141 | None:intergenic | 55.0% | |
! | TCGTCCAGGGCCTTATGCTT+GGG | - | chr8_1:56426199-56426218 | Msa1202770:intron | 55.0% |
TCAACCCAAGCATAAGGCCC+TGG | + | chr8_1:56426206-56426225 | None:intergenic | 55.0% | |
TGCCACAGGGGGCAGTAATA+CGG | + | chr8_1:56427260-56427279 | None:intergenic | 55.0% | |
GGTTGAATTGCAGCGCCTTG+AGG | - | chr8_1:56427748-56427767 | Msa1202770:intron | 55.0% | |
TCACAGCAACACGGACCCAG+CGG | - | chr8_1:56424842-56424861 | Msa1202770:three_prime_UTR | 60.0% | |
!! | AGCGACGGTTGGTTGGTGGT+GGG | + | chr8_1:56424878-56424897 | None:intergenic | 60.0% |
AGAGGAGAGCGACGGTTGGT+TGG | + | chr8_1:56424885-56424904 | None:intergenic | 60.0% | |
GAGAGAGGAGAGGAGAGCGA+CGG | + | chr8_1:56424893-56424912 | None:intergenic | 60.0% | |
!! | GGTGGTTTGCTGCCGGAAGA+TGG | + | chr8_1:56425993-56426012 | None:intergenic | 60.0% |
AAGCTAGCCCGCTTTCGACG+GGG | + | chr8_1:56426095-56426114 | None:intergenic | 60.0% | |
CAAGCTAGCCCGCTTTCGAC+GGG | + | chr8_1:56426096-56426115 | None:intergenic | 60.0% | |
GAAGCAACGCAACGCACCAG+AGG | + | chr8_1:56426123-56426142 | None:intergenic | 60.0% | |
! | GTCGTCCAGGGCCTTATGCT+TGG | - | chr8_1:56426198-56426217 | Msa1202770:intron | 60.0% |
GCAGCGCCGTGCCTTTATAC+TGG | - | chr8_1:56426307-56426326 | Msa1202770:intron | 60.0% | |
GTCCGTATTACTGCCCCCTG+TGG | - | chr8_1:56427255-56427274 | Msa1202770:intron | 60.0% | |
!! | GGTTGGTTGGTGGTGGGTGG+CGG | + | chr8_1:56424872-56424891 | None:intergenic | 65.0% |
!! | GACGGTTGGTTGGTGGTGGG+TGG | + | chr8_1:56424875-56424894 | None:intergenic | 65.0% |
!! | GAGCGACGGTTGGTTGGTGG+TGG | + | chr8_1:56424879-56424898 | None:intergenic | 65.0% |
! | GGAGAGCGACGGTTGGTTGG+TGG | + | chr8_1:56424882-56424901 | None:intergenic | 65.0% |
GAGGAGAGGAGAGCGACGGT+TGG | + | chr8_1:56424889-56424908 | None:intergenic | 65.0% | |
!! | CGGGCTAGCTTGAGACCCTC+TGG | - | chr8_1:56426104-56426123 | Msa1202770:intron | 65.0% |
!! | GGTTGGTGGTGGGTGGCGGT+GGG | + | chr8_1:56424868-56424887 | None:intergenic | 70.0% |
!! | TGGTTGGTGGTGGGTGGCGG+TGG | + | chr8_1:56424869-56424888 | None:intergenic | 70.0% |
!! | GTGGGTGGCGGTGGGCCGCT+GGG | + | chr8_1:56424860-56424879 | None:intergenic | 80.0% |
!! | GGTGGGTGGCGGTGGGCCGC+TGG | + | chr8_1:56424861-56424880 | None:intergenic | 85.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr8_1 | gene | 56424790 | 56428078 | 56424790 | ID=Msa1202770;Name=Msa1202770 |
chr8_1 | mRNA | 56424790 | 56428078 | 56424790 | ID=Msa1202770-mRNA-1;Parent=Msa1202770;Name=Msa1202770-mRNA-1;_AED=0.04;_eAED=0.04;_QI=178|1|1|1|0.66|0.5|4|282|180 |
chr8_1 | exon | 56424790 | 56425236 | 56424790 | ID=Msa1202770-mRNA-1:exon:18358;Parent=Msa1202770-mRNA-1 |
chr8_1 | exon | 56426540 | 56426661 | 56426540 | ID=Msa1202770-mRNA-1:exon:18357;Parent=Msa1202770-mRNA-1 |
chr8_1 | exon | 56426743 | 56427013 | 56426743 | ID=Msa1202770-mRNA-1:exon:18356;Parent=Msa1202770-mRNA-1 |
chr8_1 | exon | 56427916 | 56428078 | 56427916 | ID=Msa1202770-mRNA-1:exon:18355;Parent=Msa1202770-mRNA-1 |
chr8_1 | five_prime_UTR | 56427916 | 56428078 | 56427916 | ID=Msa1202770-mRNA-1:five_prime_utr;Parent=Msa1202770-mRNA-1 |
chr8_1 | five_prime_UTR | 56426999 | 56427013 | 56426999 | ID=Msa1202770-mRNA-1:five_prime_utr;Parent=Msa1202770-mRNA-1 |
chr8_1 | CDS | 56426743 | 56426998 | 56426743 | ID=Msa1202770-mRNA-1:cds;Parent=Msa1202770-mRNA-1 |
chr8_1 | CDS | 56426540 | 56426661 | 56426540 | ID=Msa1202770-mRNA-1:cds;Parent=Msa1202770-mRNA-1 |
chr8_1 | CDS | 56425072 | 56425236 | 56425072 | ID=Msa1202770-mRNA-1:cds;Parent=Msa1202770-mRNA-1 |
chr8_1 | three_prime_UTR | 56424790 | 56425071 | 56424790 | ID=Msa1202770-mRNA-1:three_prime_utr;Parent=Msa1202770-mRNA-1 |
Gene Sequence |
Protein sequence |