Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0944940 | KEH16865.1 | 99.298 | 285 | 2 | 0 | 1 | 285 | 14 | 298 | 0.0 | 579 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0944940 | sp|P93286|CCMFC_ARATH | 84.462 | 251 | 31 | 4 | 1 | 247 | 14 | 260 | 2.52e-120 | 354 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0026430 | Msa0944940 | -0.809392 | 1.935580e-50 | -8.615850e-47 |
| Msa0069500 | Msa0944940 | 0.822924 | 1.825904e-53 | -8.615850e-47 |
| Msa0697990 | Msa0944940 | 0.853790 | 1.893533e-61 | -8.615850e-47 |
| Msa0721280 | Msa0944940 | -0.801162 | 1.025377e-48 | -8.615850e-47 |
| Msa0220440 | Msa0944940 | -0.826752 | 2.283292e-54 | -8.615850e-47 |
| Msa0253200 | Msa0944940 | -0.818466 | 1.931473e-52 | -8.615850e-47 |
| Msa0261720 | Msa0944940 | -0.819752 | 9.845800e-53 | -8.615850e-47 |
| Msa0292030 | Msa0944940 | -0.818025 | 2.430312e-52 | -8.615850e-47 |
| Msa0299580 | Msa0944940 | -0.811885 | 5.596220e-51 | -8.615850e-47 |
| Msa0337060 | Msa0944940 | -0.810339 | 1.211039e-50 | -8.615850e-47 |
| Msa0872440 | Msa0944940 | -0.801945 | 7.084944e-49 | -8.615850e-47 |
| Msa0908820 | Msa0944940 | 0.804204 | 2.417294e-49 | -8.615850e-47 |
| Msa0908830 | Msa0944940 | 0.963092 | 1.157250e-121 | -8.615850e-47 |
| Msa0908840 | Msa0944940 | 0.883899 | 3.034617e-71 | -8.615850e-47 |
| Msa0908850 | Msa0944940 | 0.910719 | 1.366872e-82 | -8.615850e-47 |
| Msa0908870 | Msa0944940 | 0.858073 | 1.058087e-62 | -8.615850e-47 |
| Msa0908920 | Msa0944940 | 0.863561 | 2.280690e-64 | -8.615850e-47 |
| Msa0908930 | Msa0944940 | 0.836708 | 7.987376e-57 | -8.615850e-47 |
| Msa0920000 | Msa0944940 | 0.805021 | 1.632451e-49 | -8.615850e-47 |
| Msa0920060 | Msa0944940 | 0.859423 | 4.178528e-63 | -8.615850e-47 |
| Msa0944900 | Msa0944940 | 0.883670 | 3.687177e-71 | -8.615850e-47 |
| Msa0944920 | Msa0944940 | 0.917432 | 5.345832e-86 | -8.615850e-47 |
| Msa0944930 | Msa0944940 | 0.878408 | 2.878206e-69 | -8.615850e-47 |
| Msa0944940 | Msa0944950 | 0.807671 | 4.510874e-50 | -8.615850e-47 |
| Msa0944940 | Msa0944990 | 0.844570 | 6.964262e-59 | -8.615850e-47 |
| Msa0944940 | Msa0970990 | -0.801426 | 9.055217e-49 | -8.615850e-47 |
| Msa0944940 | Msa0983130 | 0.828113 | 1.077030e-54 | -8.615850e-47 |
| Msa0944940 | Msa0983170 | 0.968067 | 3.746957e-128 | -8.615850e-47 |
| Msa0944940 | Msa0983180 | 0.883365 | 4.771791e-71 | -8.615850e-47 |
| Msa0944940 | Msa0983190 | 0.921118 | 5.391774e-88 | -8.615850e-47 |
| Msa0944940 | Msa0983210 | 0.864717 | 9.943761e-65 | -8.615850e-47 |
| Msa0944940 | Msa0983220 | 0.847083 | 1.447459e-59 | -8.615850e-47 |
| Msa0944940 | Msa0983230 | 0.822567 | 2.210371e-53 | -8.615850e-47 |
| Msa0944940 | Msa0983260 | 0.844477 | 7.380463e-59 | -8.615850e-47 |
| Msa0944940 | Msa0983300 | 0.882681 | 8.496638e-71 | -8.615850e-47 |
| Msa0944940 | Msa0983320 | 0.849711 | 2.713292e-60 | -8.615850e-47 |
| Msa0944940 | Msa0983350 | 0.863516 | 2.355086e-64 | -8.615850e-47 |
| Msa0944940 | Msa0983460 | 0.892770 | 1.167759e-74 | -8.615850e-47 |
| Msa0944940 | Msa0983490 | 0.854968 | 8.641250e-62 | -8.615850e-47 |
| Msa0944940 | Msa0983500 | 0.883251 | 5.257519e-71 | -8.615850e-47 |
| Msa0944940 | Msa0983520 | 0.909775 | 3.922450e-82 | -8.615850e-47 |
| Msa0944940 | Msa0983530 | 0.877861 | 4.473106e-69 | -8.615850e-47 |
| Msa0944940 | Msa0983540 | 0.980857 | 3.383381e-151 | -8.615850e-47 |
| Msa0944940 | Msa0983550 | 0.819024 | 1.443109e-52 | -8.615850e-47 |
| Msa0944940 | Msa1193290 | -0.804765 | 1.845783e-49 | -8.615850e-47 |
| Msa0944940 | Msa1223870 | -0.801613 | 8.289586e-49 | -8.615850e-47 |
| Msa0944940 | Msa1228620 | 0.866112 | 3.616501e-65 | -8.615850e-47 |
| Msa0944940 | Msa1357890 | -0.802418 | 5.662888e-49 | -8.615850e-47 |
| Msa0944940 | Msa1391970 | 0.864269 | 1.373476e-64 | -8.615850e-47 |
| Msa0944940 | Msa1392010 | 0.850866 | 1.286865e-60 | -8.615850e-47 |
| Msa0944940 | Msa1392030 | 0.873915 | 1.015494e-67 | -8.615850e-47 |
| Msa0944940 | Msa1392120 | 0.893270 | 7.345518e-75 | -8.615850e-47 |
| Msa0944940 | Msa1392160 | 0.902585 | 8.338283e-79 | -8.615850e-47 |
| Msa0944940 | Msa1398090 | -0.802773 | 4.785168e-49 | -8.615850e-47 |
| Msa0944940 | Msa1453870 | 0.804759 | 1.851113e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0944940 | MtrunA17_MTg0491351 | 100.000 | 285 | 0 | 0 | 1 | 285 | 14 | 298 | 0.0 | 577 |
| Msa0944940 | MtrunA17_Chr6g0457311 | 99.197 | 249 | 2 | 0 | 1 | 249 | 14 | 262 | 0.0 | 506 |
| Msa0944940 | MtrunA17_Chr5g0421701 | 100.000 | 94 | 0 | 0 | 1 | 94 | 14 | 107 | 3.78e-60 | 186 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0944940 | ATMG00180.1 | 86.056 | 251 | 27 | 4 | 1 | 247 | 14 | 260 | 1.22e-124 | 363 |
| Msa0944940 | AT2G07815.1 | 92.063 | 63 | 5 | 0 | 1 | 63 | 186 | 248 | 1.99e-31 | 118 |
Find 98 sgRNAs with CRISPR-Local
Find 252 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTTCGACCCTTCTTTCTAAA+TGG | 0.147379 | 6_3:-22378782 | None:intergenic |
| AAGATGAATATTTCACATTT+TGG | 0.158170 | 6_3:+22378963 | Msa0944940:CDS |
| ATTCTATTACCAGACATAAT+TGG | 0.200005 | 6_3:+22378486 | Msa0944940:CDS |
| GAAAGAAGGGTCGAAGGTTT+TGG | 0.227935 | 6_3:+22378789 | Msa0944940:CDS |
| TATCCCTTCATTCCCTCTTT+TGG | 0.232096 | 6_3:+22378386 | Msa0944940:CDS |
| ATTATAGTCCCATTGGAAAA+AGG | 0.254767 | 6_3:-22378354 | None:intergenic |
| CCCACGCCTCCTATTTGTTC+GGG | 0.312445 | 6_3:+22379051 | Msa0944940:CDS |
| GCCCACGCCTCCTATTTGTT+CGG | 0.316442 | 6_3:+22379050 | Msa0944940:CDS |
| TAGGGTTAGGCCTAAGTCTT+TGG | 0.319027 | 6_3:-22378710 | None:intergenic |
| AGAGCTTCAAGCCCGATTTC+AGG | 0.325181 | 6_3:-22378876 | None:intergenic |
| TGTGAAATATTCATCTTCAT+TGG | 0.340034 | 6_3:-22378957 | None:intergenic |
| CGTTGTTGCTCATTCCCGTT+AGG | 0.367528 | 6_3:-22378729 | None:intergenic |
| GTGCCACCTGAACCTGAAAT+CGG | 0.371160 | 6_3:+22378864 | Msa0944940:CDS |
| TTCGACCCTTCTTTCTAAAT+GGG | 0.377200 | 6_3:-22378781 | None:intergenic |
| TCAAGCCCGATTTCAGGTTC+AGG | 0.383654 | 6_3:-22378870 | None:intergenic |
| TTCTATTACCAGACATAATT+GGG | 0.392242 | 6_3:+22378487 | Msa0944940:CDS |
| ATTATGTCTGGTAATAGAAT+AGG | 0.394739 | 6_3:-22378483 | None:intergenic |
| CATGGAGCGTATGAATTTCC+TGG | 0.395551 | 6_3:-22378421 | None:intergenic |
| CAGCACCCTTACTATTGAAA+TGG | 0.410333 | 6_3:+22378301 | Msa0944940:CDS |
| TCGTCGGGTGGTGCTTGTGT+GGG | 0.410402 | 6_3:+22378837 | Msa0944940:CDS |
| GACGAACCATTTCAATAGTA+AGG | 0.419006 | 6_3:-22378307 | None:intergenic |
| GACTTAGGCCTAACCCTAAC+GGG | 0.420338 | 6_3:+22378715 | Msa0944940:CDS |
| GCCTCCTATTTGTTCGGGGC+GGG | 0.426566 | 6_3:+22379056 | Msa0944940:CDS |
| TGCTCATTCCCGTTAGGGTT+AGG | 0.432567 | 6_3:-22378723 | None:intergenic |
| CAGCTGTCGGCTCGTTGGTA+AGG | 0.438588 | 6_3:-22378901 | None:intergenic |
| GGCGTTTCCAGCTCTAGTTT+CGG | 0.439316 | 6_3:-22378520 | None:intergenic |
| AATGACAAGATGGGGTGCTC+CGG | 0.443575 | 6_3:+22378753 | Msa0944940:CDS |
| GCGTGAACTCTGACTCGATC+CGG | 0.445171 | 6_3:+22379081 | Msa0944940:CDS |
| TTCGTCGGGTGGTGCTTGTG+TGG | 0.447162 | 6_3:+22378836 | Msa0944940:CDS |
| GGGAATGAAGGGATAAGAAT+AGG | 0.452088 | 6_3:-22378378 | None:intergenic |
| GGAGTGTGCATCTGTATGTT+GGG | 0.452607 | 6_3:+22378984 | Msa0944940:CDS |
| AAATAGGAGGCGTGGGCCAC+AGG | 0.457252 | 6_3:-22379044 | None:intergenic |
| AGCGTGAGCGGGCGCGGAGA+AGG | 0.461302 | 6_3:+22378682 | Msa0944940:CDS |
| TAGACCAAAAGAGGGAATGA+AGG | 0.462783 | 6_3:-22378390 | None:intergenic |
| TGGAGTGTGCATCTGTATGT+TGG | 0.464038 | 6_3:+22378983 | Msa0944940:CDS |
| TTATGTCTGGTAATAGAATA+GGG | 0.466280 | 6_3:-22378482 | None:intergenic |
| CGTCGGGTGGTGCTTGTGTG+GGG | 0.474449 | 6_3:+22378838 | Msa0944940:CDS |
| GTTGTTGCTCATTCCCGTTA+GGG | 0.478561 | 6_3:-22378728 | None:intergenic |
| GAGCTTCTCCCAATTATGTC+TGG | 0.479434 | 6_3:-22378495 | None:intergenic |
| ATAAGAAGGAAATGAAGAAC+GGG | 0.482634 | 6_3:-22378558 | None:intergenic |
| ATGACAAGATGGGGTGCTCC+GGG | 0.484900 | 6_3:+22378754 | Msa0944940:CDS |
| AATAGGAATTATAGTCCCAT+TGG | 0.486797 | 6_3:-22378361 | None:intergenic |
| TAGGTCAGCAAAGCGTGAGC+GGG | 0.488590 | 6_3:+22378671 | Msa0944940:CDS |
| GTCGGGTGGTGCTTGTGTGG+GGG | 0.489593 | 6_3:+22378839 | Msa0944940:CDS |
| TGCCACCTGAACCTGAAATC+GGG | 0.498655 | 6_3:+22378865 | Msa0944940:CDS |
| TATGGTCGTGCCTCGTGGCA+CGG | 0.499749 | 6_3:+22378278 | None:intergenic |
| TTTCCTTCTTATCGAATCCA+AGG | 0.506357 | 6_3:+22378569 | Msa0944940:CDS |
| TCCTATTTGTTCGGGGCGGG+CGG | 0.509665 | 6_3:+22379059 | Msa0944940:CDS |
| CAGCGGCGGGATTGAATACC+CGG | 0.509879 | 6_3:-22379100 | None:intergenic |
| GAATGTAGATAGACCAAAAG+AGG | 0.511343 | 6_3:-22378399 | None:intergenic |
| CAGGAAATTCATACGCTCCA+TGG | 0.512722 | 6_3:+22378422 | Msa0944940:CDS |
| TCGGGTGGTGCTTGTGTGGG+GGG | 0.515078 | 6_3:+22378840 | Msa0944940:CDS |
| CAAGCACCACCCGACGAAGG+GGG | 0.520307 | 6_3:-22378831 | None:intergenic |
| CACAAGCACCACCCGACGAA+GGG | 0.520704 | 6_3:-22378833 | None:intergenic |
| TGTTCTTCTGTCGTGCGACC+CGG | 0.520759 | 6_3:+22379007 | Msa0944940:CDS |
| TCGACCCTTCTTTCTAAATG+GGG | 0.525145 | 6_3:-22378780 | None:intergenic |
| AGCTCATCCGAAACTAGAGC+TGG | 0.527296 | 6_3:+22378513 | Msa0944940:CDS |
| AAGCACCACCCGACGAAGGG+GGG | 0.538997 | 6_3:-22378830 | None:intergenic |
| GATAAGAAGGAAATGAAGAA+CGG | 0.546073 | 6_3:-22378559 | None:intergenic |
| CCCCGAACAAATAGGAGGCG+TGG | 0.547237 | 6_3:-22379052 | None:intergenic |
| CGCCTCCTATTTGTTCGGGG+CGG | 0.549996 | 6_3:+22379055 | Msa0944940:CDS |
| GAAGGATACACCAAAGACTT+AGG | 0.550018 | 6_3:+22378700 | Msa0944940:CDS |
| CGACCCTTCTTTCTAAATGG+GGG | 0.551750 | 6_3:-22378779 | None:intergenic |
| GCAACAACGAAATGACAAGA+TGG | 0.554660 | 6_3:+22378743 | Msa0944940:CDS |
| TTCCTTCTTATCGAATCCAA+GGG | 0.555052 | 6_3:+22378570 | Msa0944940:CDS |
| AGACCAAAAGAGGGAATGAA+GGG | 0.556885 | 6_3:-22378389 | None:intergenic |
| CGTGAACTCTGACTCGATCC+GGG | 0.560154 | 6_3:+22379082 | Msa0944940:CDS |
| GCCATCAGCTGTCGGCTCGT+TGG | 0.560398 | 6_3:-22378906 | None:intergenic |
| CAACAACGAAATGACAAGAT+GGG | 0.561008 | 6_3:+22378744 | Msa0944940:CDS |
| CCCGAACAAATAGGAGGCGT+GGG | 0.562967 | 6_3:-22379051 | None:intergenic |
| TCTTCTCTTTACCACGCGAT+AGG | 0.563452 | 6_3:+22378652 | Msa0944940:CDS |
| AGCCGACAGCTGATGGCTGT+TGG | 0.570681 | 6_3:+22378912 | Msa0944940:CDS |
| ACCAACGAGCCGACAGCTGA+TGG | 0.571630 | 6_3:+22378905 | Msa0944940:CDS |
| ACAAGCACCACCCGACGAAG+GGG | 0.579385 | 6_3:-22378832 | None:intergenic |
| CATTTAGAAAGAAGGGTCGA+AGG | 0.579824 | 6_3:+22378783 | Msa0944940:CDS |
| CAACTGAGCATCTCAGCGGC+GGG | 0.582580 | 6_3:-22379113 | None:intergenic |
| AGCCCGATTTCAGGTTCAGG+TGG | 0.584035 | 6_3:-22378867 | None:intergenic |
| ACACAAGCACCACCCGACGA+AGG | 0.587385 | 6_3:-22378834 | None:intergenic |
| ATAGGTCAGCAAAGCGTGAG+CGG | 0.592191 | 6_3:+22378670 | Msa0944940:CDS |
| AACGGGAACGAAACGAAATG+AGG | 0.592429 | 6_3:-22378541 | None:intergenic |
| AGACTTAGGCCTAACCCTAA+CGG | 0.593764 | 6_3:+22378714 | Msa0944940:CDS |
| GACCAACAGCCATCAGCTGT+CGG | 0.598703 | 6_3:-22378914 | None:intergenic |
| GTCAGTAGAGATGTTCCCAC+AGG | 0.600549 | 6_3:+22378327 | Msa0944940:CDS |
| AAATTCATACGCTCCATGGA+CGG | 0.604092 | 6_3:+22378426 | Msa0944940:CDS |
| TCAACTGAGCATCTCAGCGG+CGG | 0.604364 | 6_3:-22379114 | None:intergenic |
| GCCCGCCCCGAACAAATAGG+AGG | 0.605187 | 6_3:-22379057 | None:intergenic |
| CGCTTTGCTGACCTATCGCG+TGG | 0.606381 | 6_3:-22378663 | None:intergenic |
| ACGAACCATTTCAATAGTAA+GGG | 0.622019 | 6_3:-22378306 | None:intergenic |
| TCATATTTAGAATCTTTCTG+CGG | 0.622913 | 6_3:+22378600 | Msa0944940:CDS |
| AACAACGAAATGACAAGATG+GGG | 0.646716 | 6_3:+22378745 | Msa0944940:CDS |
| AAGGGTGCTGCCGTGCCACG+AGG | 0.653393 | 6_3:-22378288 | None:intergenic |
| GGCGGCTTATGTGCGACCTG+TGG | 0.655333 | 6_3:+22379028 | Msa0944940:CDS |
| AATGTAGATAGACCAAAAGA+GGG | 0.661451 | 6_3:-22378398 | None:intergenic |
| TCCTTCTTATCGAATCCAAG+GGG | 0.669734 | 6_3:+22378571 | Msa0944940:CDS |
| CCTTCTTATCGAATCCAAGG+GGG | 0.687346 | 6_3:+22378572 | Msa0944940:CDS |
| TCTTCTGTCGTGCGACCCGG+CGG | 0.715894 | 6_3:+22379010 | Msa0944940:CDS |
| GAGTCAACTGAGCATCTCAG+CGG | 0.749566 | 6_3:-22379117 | None:intergenic |
| TGTCTGGTAATAGAATAGGG+CGG | 0.798485 | 6_3:-22378479 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAGATGAATATTTCACATTT+TGG | + | chr6_3:22378963-22378982 | Msa0944940:CDS | 20.0% |
| !!! | AAGATGAATATTTCACATTT+TGG | + | chr6_3:22378963-22378982 | Msa0944940:CDS | 20.0% |
| ! | TTATGTCTGGTAATAGAATA+GGG | - | chr6_3:22378485-22378504 | None:intergenic | 25.0% |
| ! | ATTATGTCTGGTAATAGAAT+AGG | - | chr6_3:22378486-22378505 | None:intergenic | 25.0% |
| ! | ATTCTATTACCAGACATAAT+TGG | + | chr6_3:22378486-22378505 | Msa0944940:CDS | 25.0% |
| ! | TTCTATTACCAGACATAATT+GGG | + | chr6_3:22378487-22378506 | Msa0944940:CDS | 25.0% |
| !! | TCATATTTAGAATCTTTCTG+CGG | + | chr6_3:22378600-22378619 | Msa0944940:CDS | 25.0% |
| ! | TGTGAAATATTCATCTTCAT+TGG | - | chr6_3:22378960-22378979 | None:intergenic | 25.0% |
| ! | TTATGTCTGGTAATAGAATA+GGG | - | chr6_3:22378485-22378504 | None:intergenic | 25.0% |
| ! | ATTATGTCTGGTAATAGAAT+AGG | - | chr6_3:22378486-22378505 | None:intergenic | 25.0% |
| ! | ATTCTATTACCAGACATAAT+TGG | + | chr6_3:22378486-22378505 | Msa0944940:CDS | 25.0% |
| ! | TTCTATTACCAGACATAATT+GGG | + | chr6_3:22378487-22378506 | Msa0944940:CDS | 25.0% |
| !! | TCATATTTAGAATCTTTCTG+CGG | + | chr6_3:22378600-22378619 | Msa0944940:CDS | 25.0% |
| ! | TGTGAAATATTCATCTTCAT+TGG | - | chr6_3:22378960-22378979 | None:intergenic | 25.0% |
| ACGAACCATTTCAATAGTAA+GGG | - | chr6_3:22378309-22378328 | None:intergenic | 30.0% | |
| TTATAGTCCCATTGGAAAAA+GGG | - | chr6_3:22378356-22378375 | None:intergenic | 30.0% | |
| ATTATAGTCCCATTGGAAAA+AGG | - | chr6_3:22378357-22378376 | None:intergenic | 30.0% | |
| AATAGGAATTATAGTCCCAT+TGG | - | chr6_3:22378364-22378383 | None:intergenic | 30.0% | |
| AATGTAGATAGACCAAAAGA+GGG | - | chr6_3:22378401-22378420 | None:intergenic | 30.0% | |
| ATAAGAAGGAAATGAAGAAC+GGG | - | chr6_3:22378561-22378580 | None:intergenic | 30.0% | |
| GATAAGAAGGAAATGAAGAA+CGG | - | chr6_3:22378562-22378581 | None:intergenic | 30.0% | |
| ACGAACCATTTCAATAGTAA+GGG | - | chr6_3:22378309-22378328 | None:intergenic | 30.0% | |
| TTATAGTCCCATTGGAAAAA+GGG | - | chr6_3:22378356-22378375 | None:intergenic | 30.0% | |
| ATTATAGTCCCATTGGAAAA+AGG | - | chr6_3:22378357-22378376 | None:intergenic | 30.0% | |
| AATAGGAATTATAGTCCCAT+TGG | - | chr6_3:22378364-22378383 | None:intergenic | 30.0% | |
| AATGTAGATAGACCAAAAGA+GGG | - | chr6_3:22378401-22378420 | None:intergenic | 30.0% | |
| ATAAGAAGGAAATGAAGAAC+GGG | - | chr6_3:22378561-22378580 | None:intergenic | 30.0% | |
| GATAAGAAGGAAATGAAGAA+CGG | - | chr6_3:22378562-22378581 | None:intergenic | 30.0% | |
| GACGAACCATTTCAATAGTA+AGG | - | chr6_3:22378310-22378329 | None:intergenic | 35.0% | |
| TATAGTCCCATTGGAAAAAG+GGG | - | chr6_3:22378355-22378374 | None:intergenic | 35.0% | |
| GAATGTAGATAGACCAAAAG+AGG | - | chr6_3:22378402-22378421 | None:intergenic | 35.0% | |
| ! | TTTTGGTCTATCTACATTCC+AGG | + | chr6_3:22378403-22378422 | Msa0944940:CDS | 35.0% |
| TTTCCTTCTTATCGAATCCA+AGG | + | chr6_3:22378569-22378588 | Msa0944940:CDS | 35.0% | |
| TTCCTTCTTATCGAATCCAA+GGG | + | chr6_3:22378570-22378589 | Msa0944940:CDS | 35.0% | |
| CAACAACGAAATGACAAGAT+GGG | + | chr6_3:22378744-22378763 | Msa0944940:CDS | 35.0% | |
| AACAACGAAATGACAAGATG+GGG | + | chr6_3:22378745-22378764 | Msa0944940:CDS | 35.0% | |
| TTCGACCCTTCTTTCTAAAT+GGG | - | chr6_3:22378784-22378803 | None:intergenic | 35.0% | |
| ! | TCATCTTCATTGGAGCTTTT+TGG | - | chr6_3:22378950-22378969 | None:intergenic | 35.0% |
| GACGAACCATTTCAATAGTA+AGG | - | chr6_3:22378310-22378329 | None:intergenic | 35.0% | |
| TATAGTCCCATTGGAAAAAG+GGG | - | chr6_3:22378355-22378374 | None:intergenic | 35.0% | |
| GAATGTAGATAGACCAAAAG+AGG | - | chr6_3:22378402-22378421 | None:intergenic | 35.0% | |
| ! | TTTTGGTCTATCTACATTCC+AGG | + | chr6_3:22378403-22378422 | Msa0944940:CDS | 35.0% |
| TTTCCTTCTTATCGAATCCA+AGG | + | chr6_3:22378569-22378588 | Msa0944940:CDS | 35.0% | |
| TTCCTTCTTATCGAATCCAA+GGG | + | chr6_3:22378570-22378589 | Msa0944940:CDS | 35.0% | |
| CAACAACGAAATGACAAGAT+GGG | + | chr6_3:22378744-22378763 | Msa0944940:CDS | 35.0% | |
| AACAACGAAATGACAAGATG+GGG | + | chr6_3:22378745-22378764 | Msa0944940:CDS | 35.0% | |
| TTCGACCCTTCTTTCTAAAT+GGG | - | chr6_3:22378784-22378803 | None:intergenic | 35.0% | |
| ! | TCATCTTCATTGGAGCTTTT+TGG | - | chr6_3:22378950-22378969 | None:intergenic | 35.0% |
| CAGCACCCTTACTATTGAAA+TGG | + | chr6_3:22378301-22378320 | Msa0944940:CDS | 40.0% | |
| GGGAATGAAGGGATAAGAAT+AGG | - | chr6_3:22378381-22378400 | None:intergenic | 40.0% | |
| ! | TATCCCTTCATTCCCTCTTT+TGG | + | chr6_3:22378386-22378405 | Msa0944940:CDS | 40.0% |
| AGACCAAAAGAGGGAATGAA+GGG | - | chr6_3:22378392-22378411 | None:intergenic | 40.0% | |
| TAGACCAAAAGAGGGAATGA+AGG | - | chr6_3:22378393-22378412 | None:intergenic | 40.0% | |
| AAATTCATACGCTCCATGGA+CGG | + | chr6_3:22378426-22378445 | Msa0944940:CDS | 40.0% | |
| TGTCTGGTAATAGAATAGGG+CGG | - | chr6_3:22378482-22378501 | None:intergenic | 40.0% | |
| TCCTTCTTATCGAATCCAAG+GGG | + | chr6_3:22378571-22378590 | Msa0944940:CDS | 40.0% | |
| TAAATATGAGAAGTCCCCCT+TGG | - | chr6_3:22378589-22378608 | None:intergenic | 40.0% | |
| GAAGGATACACCAAAGACTT+AGG | + | chr6_3:22378700-22378719 | Msa0944940:CDS | 40.0% | |
| GCAACAACGAAATGACAAGA+TGG | + | chr6_3:22378743-22378762 | Msa0944940:CDS | 40.0% | |
| TCGACCCTTCTTTCTAAATG+GGG | - | chr6_3:22378783-22378802 | None:intergenic | 40.0% | |
| CTTCGACCCTTCTTTCTAAA+TGG | - | chr6_3:22378785-22378804 | None:intergenic | 40.0% | |
| CATTTAGAAAGAAGGGTCGA+AGG | + | chr6_3:22378783-22378802 | Msa0944940:CDS | 40.0% | |
| ! | AAAGAAGGGTCGAAGGTTTT+GGG | + | chr6_3:22378790-22378809 | Msa0944940:CDS | 40.0% |
| ! | TCTTCATTGGAGCTTTTTGG+TGG | - | chr6_3:22378947-22378966 | None:intergenic | 40.0% |
| CAGCACCCTTACTATTGAAA+TGG | + | chr6_3:22378301-22378320 | Msa0944940:CDS | 40.0% | |
| GGGAATGAAGGGATAAGAAT+AGG | - | chr6_3:22378381-22378400 | None:intergenic | 40.0% | |
| ! | TATCCCTTCATTCCCTCTTT+TGG | + | chr6_3:22378386-22378405 | Msa0944940:CDS | 40.0% |
| AGACCAAAAGAGGGAATGAA+GGG | - | chr6_3:22378392-22378411 | None:intergenic | 40.0% | |
| TAGACCAAAAGAGGGAATGA+AGG | - | chr6_3:22378393-22378412 | None:intergenic | 40.0% | |
| AAATTCATACGCTCCATGGA+CGG | + | chr6_3:22378426-22378445 | Msa0944940:CDS | 40.0% | |
| TGTCTGGTAATAGAATAGGG+CGG | - | chr6_3:22378482-22378501 | None:intergenic | 40.0% | |
| TCCTTCTTATCGAATCCAAG+GGG | + | chr6_3:22378571-22378590 | Msa0944940:CDS | 40.0% | |
| TAAATATGAGAAGTCCCCCT+TGG | - | chr6_3:22378589-22378608 | None:intergenic | 40.0% | |
| GAAGGATACACCAAAGACTT+AGG | + | chr6_3:22378700-22378719 | Msa0944940:CDS | 40.0% | |
| GCAACAACGAAATGACAAGA+TGG | + | chr6_3:22378743-22378762 | Msa0944940:CDS | 40.0% | |
| TCGACCCTTCTTTCTAAATG+GGG | - | chr6_3:22378783-22378802 | None:intergenic | 40.0% | |
| CTTCGACCCTTCTTTCTAAA+TGG | - | chr6_3:22378785-22378804 | None:intergenic | 40.0% | |
| CATTTAGAAAGAAGGGTCGA+AGG | + | chr6_3:22378783-22378802 | Msa0944940:CDS | 40.0% | |
| ! | AAAGAAGGGTCGAAGGTTTT+GGG | + | chr6_3:22378790-22378809 | Msa0944940:CDS | 40.0% |
| ! | TCTTCATTGGAGCTTTTTGG+TGG | - | chr6_3:22378947-22378966 | None:intergenic | 40.0% |
| CATGGAGCGTATGAATTTCC+TGG | - | chr6_3:22378424-22378443 | None:intergenic | 45.0% | |
| CAGGAAATTCATACGCTCCA+TGG | + | chr6_3:22378422-22378441 | Msa0944940:CDS | 45.0% | |
| GAGCTTCTCCCAATTATGTC+TGG | - | chr6_3:22378498-22378517 | None:intergenic | 45.0% | |
| AACGGGAACGAAACGAAATG+AGG | - | chr6_3:22378544-22378563 | None:intergenic | 45.0% | |
| CCTTCTTATCGAATCCAAGG+GGG | + | chr6_3:22378572-22378591 | Msa0944940:CDS | 45.0% | |
| TCTTCTCTTTACCACGCGAT+AGG | + | chr6_3:22378652-22378671 | Msa0944940:CDS | 45.0% | |
| TAGGGTTAGGCCTAAGTCTT+TGG | - | chr6_3:22378713-22378732 | None:intergenic | 45.0% | |
| AGACTTAGGCCTAACCCTAA+CGG | + | chr6_3:22378714-22378733 | Msa0944940:CDS | 45.0% | |
| GTTGTTGCTCATTCCCGTTA+GGG | - | chr6_3:22378731-22378750 | None:intergenic | 45.0% | |
| GCACCCCCATTTAGAAAGAA+GGG | + | chr6_3:22378776-22378795 | Msa0944940:CDS | 45.0% | |
| CGACCCTTCTTTCTAAATGG+GGG | - | chr6_3:22378782-22378801 | None:intergenic | 45.0% | |
| ! | GAAAGAAGGGTCGAAGGTTT+TGG | + | chr6_3:22378789-22378808 | Msa0944940:CDS | 45.0% |
| TGGAGTGTGCATCTGTATGT+TGG | + | chr6_3:22378983-22379002 | Msa0944940:CDS | 45.0% | |
| GGAGTGTGCATCTGTATGTT+GGG | + | chr6_3:22378984-22379003 | Msa0944940:CDS | 45.0% | |
| CATGGAGCGTATGAATTTCC+TGG | - | chr6_3:22378424-22378443 | None:intergenic | 45.0% | |
| CAGGAAATTCATACGCTCCA+TGG | + | chr6_3:22378422-22378441 | Msa0944940:CDS | 45.0% | |
| GAGCTTCTCCCAATTATGTC+TGG | - | chr6_3:22378498-22378517 | None:intergenic | 45.0% | |
| AACGGGAACGAAACGAAATG+AGG | - | chr6_3:22378544-22378563 | None:intergenic | 45.0% | |
| CCTTCTTATCGAATCCAAGG+GGG | + | chr6_3:22378572-22378591 | Msa0944940:CDS | 45.0% | |
| TCTTCTCTTTACCACGCGAT+AGG | + | chr6_3:22378652-22378671 | Msa0944940:CDS | 45.0% | |
| TAGGGTTAGGCCTAAGTCTT+TGG | - | chr6_3:22378713-22378732 | None:intergenic | 45.0% | |
| AGACTTAGGCCTAACCCTAA+CGG | + | chr6_3:22378714-22378733 | Msa0944940:CDS | 45.0% | |
| GTTGTTGCTCATTCCCGTTA+GGG | - | chr6_3:22378731-22378750 | None:intergenic | 45.0% | |
| GCACCCCCATTTAGAAAGAA+GGG | + | chr6_3:22378776-22378795 | Msa0944940:CDS | 45.0% | |
| CGACCCTTCTTTCTAAATGG+GGG | - | chr6_3:22378782-22378801 | None:intergenic | 45.0% | |
| ! | GAAAGAAGGGTCGAAGGTTT+TGG | + | chr6_3:22378789-22378808 | Msa0944940:CDS | 45.0% |
| TGGAGTGTGCATCTGTATGT+TGG | + | chr6_3:22378983-22379002 | Msa0944940:CDS | 45.0% | |
| GGAGTGTGCATCTGTATGTT+GGG | + | chr6_3:22378984-22379003 | Msa0944940:CDS | 45.0% | |
| GTCAGTAGAGATGTTCCCAC+AGG | + | chr6_3:22378327-22378346 | Msa0944940:CDS | 50.0% | |
| !! | TTGGAAAAAGGGGCACCTGT+GGG | - | chr6_3:22378345-22378364 | None:intergenic | 50.0% |
| !! | ATTGGAAAAAGGGGCACCTG+TGG | - | chr6_3:22378346-22378365 | None:intergenic | 50.0% |
| ! | ACAGGTGCCCCTTTTTCCAA+TGG | + | chr6_3:22378345-22378364 | Msa0944940:CDS | 50.0% |
| ! | CAGGTGCCCCTTTTTCCAAT+GGG | + | chr6_3:22378346-22378365 | Msa0944940:CDS | 50.0% |
| TCCATGGACGGAGCAAAAAG+TGG | + | chr6_3:22378438-22378457 | Msa0944940:CDS | 50.0% | |
| !!! | TCCACTTTTTGCTCCGTCCA+TGG | - | chr6_3:22378442-22378461 | None:intergenic | 50.0% |
| CGGAGCAAAAAGTGGAGTCT+TGG | + | chr6_3:22378446-22378465 | Msa0944940:CDS | 50.0% | |
| AGCTCATCCGAAACTAGAGC+TGG | + | chr6_3:22378513-22378532 | Msa0944940:CDS | 50.0% | |
| ! | GGCGTTTCCAGCTCTAGTTT+CGG | - | chr6_3:22378523-22378542 | None:intergenic | 50.0% |
| CCCCCTTGGATTCGATAAGA+AGG | - | chr6_3:22378575-22378594 | None:intergenic | 50.0% | |
| ATAGGTCAGCAAAGCGTGAG+CGG | + | chr6_3:22378670-22378689 | Msa0944940:CDS | 50.0% | |
| GACTTAGGCCTAACCCTAAC+GGG | + | chr6_3:22378715-22378734 | Msa0944940:CDS | 50.0% | |
| TGCTCATTCCCGTTAGGGTT+AGG | - | chr6_3:22378726-22378745 | None:intergenic | 50.0% | |
| CGTTGTTGCTCATTCCCGTT+AGG | - | chr6_3:22378732-22378751 | None:intergenic | 50.0% | |
| ! | AATGACAAGATGGGGTGCTC+CGG | + | chr6_3:22378753-22378772 | Msa0944940:CDS | 50.0% |
| !! | TCTTTCTAAATGGGGGTGCC+CGG | - | chr6_3:22378775-22378794 | None:intergenic | 50.0% |
| GGCACCCCCATTTAGAAAGA+AGG | + | chr6_3:22378775-22378794 | Msa0944940:CDS | 50.0% | |
| GTGCCACCTGAACCTGAAAT+CGG | + | chr6_3:22378864-22378883 | Msa0944940:CDS | 50.0% | |
| TGCCACCTGAACCTGAAATC+GGG | + | chr6_3:22378865-22378884 | Msa0944940:CDS | 50.0% | |
| !! | TCAAGCCCGATTTCAGGTTC+AGG | - | chr6_3:22378873-22378892 | None:intergenic | 50.0% |
| AGAGCTTCAAGCCCGATTTC+AGG | - | chr6_3:22378879-22378898 | None:intergenic | 50.0% | |
| GTCAGTAGAGATGTTCCCAC+AGG | + | chr6_3:22378327-22378346 | Msa0944940:CDS | 50.0% | |
| !! | TTGGAAAAAGGGGCACCTGT+GGG | - | chr6_3:22378345-22378364 | None:intergenic | 50.0% |
| !! | ATTGGAAAAAGGGGCACCTG+TGG | - | chr6_3:22378346-22378365 | None:intergenic | 50.0% |
| ! | ACAGGTGCCCCTTTTTCCAA+TGG | + | chr6_3:22378345-22378364 | Msa0944940:CDS | 50.0% |
| ! | CAGGTGCCCCTTTTTCCAAT+GGG | + | chr6_3:22378346-22378365 | Msa0944940:CDS | 50.0% |
| TCCATGGACGGAGCAAAAAG+TGG | + | chr6_3:22378438-22378457 | Msa0944940:CDS | 50.0% | |
| !!! | TCCACTTTTTGCTCCGTCCA+TGG | - | chr6_3:22378442-22378461 | None:intergenic | 50.0% |
| CGGAGCAAAAAGTGGAGTCT+TGG | + | chr6_3:22378446-22378465 | Msa0944940:CDS | 50.0% | |
| AGCTCATCCGAAACTAGAGC+TGG | + | chr6_3:22378513-22378532 | Msa0944940:CDS | 50.0% | |
| ! | GGCGTTTCCAGCTCTAGTTT+CGG | - | chr6_3:22378523-22378542 | None:intergenic | 50.0% |
| CCCCCTTGGATTCGATAAGA+AGG | - | chr6_3:22378575-22378594 | None:intergenic | 50.0% | |
| ATAGGTCAGCAAAGCGTGAG+CGG | + | chr6_3:22378670-22378689 | Msa0944940:CDS | 50.0% | |
| GACTTAGGCCTAACCCTAAC+GGG | + | chr6_3:22378715-22378734 | Msa0944940:CDS | 50.0% | |
| TGCTCATTCCCGTTAGGGTT+AGG | - | chr6_3:22378726-22378745 | None:intergenic | 50.0% | |
| CGTTGTTGCTCATTCCCGTT+AGG | - | chr6_3:22378732-22378751 | None:intergenic | 50.0% | |
| ! | AATGACAAGATGGGGTGCTC+CGG | + | chr6_3:22378753-22378772 | Msa0944940:CDS | 50.0% |
| !! | TCTTTCTAAATGGGGGTGCC+CGG | - | chr6_3:22378775-22378794 | None:intergenic | 50.0% |
| GGCACCCCCATTTAGAAAGA+AGG | + | chr6_3:22378775-22378794 | Msa0944940:CDS | 50.0% | |
| GTGCCACCTGAACCTGAAAT+CGG | + | chr6_3:22378864-22378883 | Msa0944940:CDS | 50.0% | |
| TGCCACCTGAACCTGAAATC+GGG | + | chr6_3:22378865-22378884 | Msa0944940:CDS | 50.0% | |
| !! | TCAAGCCCGATTTCAGGTTC+AGG | - | chr6_3:22378873-22378892 | None:intergenic | 50.0% |
| AGAGCTTCAAGCCCGATTTC+AGG | - | chr6_3:22378879-22378898 | None:intergenic | 50.0% | |
| TAGGTCAGCAAAGCGTGAGC+GGG | + | chr6_3:22378671-22378690 | Msa0944940:CDS | 55.0% | |
| ! | ATGACAAGATGGGGTGCTCC+GGG | + | chr6_3:22378754-22378773 | Msa0944940:CDS | 55.0% |
| !! | AGCCCGATTTCAGGTTCAGG+TGG | - | chr6_3:22378870-22378889 | None:intergenic | 55.0% |
| GACCAACAGCCATCAGCTGT+CGG | - | chr6_3:22378917-22378936 | None:intergenic | 55.0% | |
| TGTTCTTCTGTCGTGCGACC+CGG | + | chr6_3:22379007-22379026 | Msa0944940:CDS | 55.0% | |
| GCCCACGCCTCCTATTTGTT+CGG | + | chr6_3:22379050-22379069 | Msa0944940:CDS | 55.0% | |
| ! | CCCGAACAAATAGGAGGCGT+GGG | - | chr6_3:22379054-22379073 | None:intergenic | 55.0% |
| CCCACGCCTCCTATTTGTTC+GGG | + | chr6_3:22379051-22379070 | Msa0944940:CDS | 55.0% | |
| CCACGCCTCCTATTTGTTCG+GGG | + | chr6_3:22379052-22379071 | Msa0944940:CDS | 55.0% | |
| ! | GCGTGAACTCTGACTCGATC+CGG | + | chr6_3:22379081-22379100 | Msa0944940:CDS | 55.0% |
| ! | CGTGAACTCTGACTCGATCC+GGG | + | chr6_3:22379082-22379101 | Msa0944940:CDS | 55.0% |
| TCAACTGAGCATCTCAGCGG+CGG | - | chr6_3:22379117-22379136 | None:intergenic | 55.0% | |
| TAGGTCAGCAAAGCGTGAGC+GGG | + | chr6_3:22378671-22378690 | Msa0944940:CDS | 55.0% | |
| ! | ATGACAAGATGGGGTGCTCC+GGG | + | chr6_3:22378754-22378773 | Msa0944940:CDS | 55.0% |
| !! | AGCCCGATTTCAGGTTCAGG+TGG | - | chr6_3:22378870-22378889 | None:intergenic | 55.0% |
| GACCAACAGCCATCAGCTGT+CGG | - | chr6_3:22378917-22378936 | None:intergenic | 55.0% | |
| TGTTCTTCTGTCGTGCGACC+CGG | + | chr6_3:22379007-22379026 | Msa0944940:CDS | 55.0% | |
| GCCCACGCCTCCTATTTGTT+CGG | + | chr6_3:22379050-22379069 | Msa0944940:CDS | 55.0% | |
| ! | CCCGAACAAATAGGAGGCGT+GGG | - | chr6_3:22379054-22379073 | None:intergenic | 55.0% |
| CCCACGCCTCCTATTTGTTC+GGG | + | chr6_3:22379051-22379070 | Msa0944940:CDS | 55.0% | |
| CCACGCCTCCTATTTGTTCG+GGG | + | chr6_3:22379052-22379071 | Msa0944940:CDS | 55.0% | |
| ! | GCGTGAACTCTGACTCGATC+CGG | + | chr6_3:22379081-22379100 | Msa0944940:CDS | 55.0% |
| ! | CGTGAACTCTGACTCGATCC+GGG | + | chr6_3:22379082-22379101 | Msa0944940:CDS | 55.0% |
| TCAACTGAGCATCTCAGCGG+CGG | - | chr6_3:22379117-22379136 | None:intergenic | 55.0% | |
| CGCTTTGCTGACCTATCGCG+TGG | - | chr6_3:22378666-22378685 | None:intergenic | 60.0% | |
| ACAAGCACCACCCGACGAAG+GGG | - | chr6_3:22378835-22378854 | None:intergenic | 60.0% | |
| CACAAGCACCACCCGACGAA+GGG | - | chr6_3:22378836-22378855 | None:intergenic | 60.0% | |
| ACACAAGCACCACCCGACGA+AGG | - | chr6_3:22378837-22378856 | None:intergenic | 60.0% | |
| TTCGTCGGGTGGTGCTTGTG+TGG | + | chr6_3:22378836-22378855 | Msa0944940:CDS | 60.0% | |
| TCGTCGGGTGGTGCTTGTGT+GGG | + | chr6_3:22378837-22378856 | Msa0944940:CDS | 60.0% | |
| !! | CAGCTGTCGGCTCGTTGGTA+AGG | - | chr6_3:22378904-22378923 | None:intergenic | 60.0% |
| ACCAACGAGCCGACAGCTGA+TGG | + | chr6_3:22378905-22378924 | Msa0944940:CDS | 60.0% | |
| AGCCGACAGCTGATGGCTGT+TGG | + | chr6_3:22378912-22378931 | Msa0944940:CDS | 60.0% | |
| ACAGGTCGCACATAAGCCGC+CGG | - | chr6_3:22379029-22379048 | None:intergenic | 60.0% | |
| ! | AAATAGGAGGCGTGGGCCAC+AGG | - | chr6_3:22379047-22379066 | None:intergenic | 60.0% |
| CCCCGAACAAATAGGAGGCG+TGG | - | chr6_3:22379055-22379074 | None:intergenic | 60.0% | |
| CGCCTCCTATTTGTTCGGGG+CGG | + | chr6_3:22379055-22379074 | Msa0944940:CDS | 60.0% | |
| GCCTCCTATTTGTTCGGGGC+GGG | + | chr6_3:22379056-22379075 | Msa0944940:CDS | 60.0% | |
| TCCTATTTGTTCGGGGCGGG+CGG | + | chr6_3:22379059-22379078 | Msa0944940:CDS | 60.0% | |
| CAGCGGCGGGATTGAATACC+CGG | - | chr6_3:22379103-22379122 | None:intergenic | 60.0% | |
| CAACTGAGCATCTCAGCGGC+GGG | - | chr6_3:22379116-22379135 | None:intergenic | 60.0% | |
| CGCTTTGCTGACCTATCGCG+TGG | - | chr6_3:22378666-22378685 | None:intergenic | 60.0% | |
| ACAAGCACCACCCGACGAAG+GGG | - | chr6_3:22378835-22378854 | None:intergenic | 60.0% | |
| CACAAGCACCACCCGACGAA+GGG | - | chr6_3:22378836-22378855 | None:intergenic | 60.0% | |
| ACACAAGCACCACCCGACGA+AGG | - | chr6_3:22378837-22378856 | None:intergenic | 60.0% | |
| TTCGTCGGGTGGTGCTTGTG+TGG | + | chr6_3:22378836-22378855 | Msa0944940:CDS | 60.0% | |
| TCGTCGGGTGGTGCTTGTGT+GGG | + | chr6_3:22378837-22378856 | Msa0944940:CDS | 60.0% | |
| !! | CAGCTGTCGGCTCGTTGGTA+AGG | - | chr6_3:22378904-22378923 | None:intergenic | 60.0% |
| ACCAACGAGCCGACAGCTGA+TGG | + | chr6_3:22378905-22378924 | Msa0944940:CDS | 60.0% | |
| AGCCGACAGCTGATGGCTGT+TGG | + | chr6_3:22378912-22378931 | Msa0944940:CDS | 60.0% | |
| ACAGGTCGCACATAAGCCGC+CGG | - | chr6_3:22379029-22379048 | None:intergenic | 60.0% | |
| ! | AAATAGGAGGCGTGGGCCAC+AGG | - | chr6_3:22379047-22379066 | None:intergenic | 60.0% |
| CCCCGAACAAATAGGAGGCG+TGG | - | chr6_3:22379055-22379074 | None:intergenic | 60.0% | |
| CGCCTCCTATTTGTTCGGGG+CGG | + | chr6_3:22379055-22379074 | Msa0944940:CDS | 60.0% | |
| GCCTCCTATTTGTTCGGGGC+GGG | + | chr6_3:22379056-22379075 | Msa0944940:CDS | 60.0% | |
| TCCTATTTGTTCGGGGCGGG+CGG | + | chr6_3:22379059-22379078 | Msa0944940:CDS | 60.0% | |
| CAGCGGCGGGATTGAATACC+CGG | - | chr6_3:22379103-22379122 | None:intergenic | 60.0% | |
| CAACTGAGCATCTCAGCGGC+GGG | - | chr6_3:22379116-22379135 | None:intergenic | 60.0% | |
| TTTCCCCGTCCCCCCTTCGT+CGG | + | chr6_3:22378821-22378840 | Msa0944940:CDS | 65.0% | |
| AAGCACCACCCGACGAAGGG+GGG | - | chr6_3:22378833-22378852 | None:intergenic | 65.0% | |
| CAAGCACCACCCGACGAAGG+GGG | - | chr6_3:22378834-22378853 | None:intergenic | 65.0% | |
| CGTCGGGTGGTGCTTGTGTG+GGG | + | chr6_3:22378838-22378857 | Msa0944940:CDS | 65.0% | |
| GTCGGGTGGTGCTTGTGTGG+GGG | + | chr6_3:22378839-22378858 | Msa0944940:CDS | 65.0% | |
| TCGGGTGGTGCTTGTGTGGG+GGG | + | chr6_3:22378840-22378859 | Msa0944940:CDS | 65.0% | |
| !! | GCCATCAGCTGTCGGCTCGT+TGG | - | chr6_3:22378909-22378928 | None:intergenic | 65.0% |
| TCTTCTGTCGTGCGACCCGG+CGG | + | chr6_3:22379010-22379029 | Msa0944940:CDS | 65.0% | |
| CAGGTCGCACATAAGCCGCC+GGG | - | chr6_3:22379028-22379047 | None:intergenic | 65.0% | |
| GGCGGCTTATGTGCGACCTG+TGG | + | chr6_3:22379028-22379047 | Msa0944940:CDS | 65.0% | |
| GCCCGCCCCGAACAAATAGG+AGG | - | chr6_3:22379060-22379079 | None:intergenic | 65.0% | |
| TTTCCCCGTCCCCCCTTCGT+CGG | + | chr6_3:22378821-22378840 | Msa0944940:CDS | 65.0% | |
| AAGCACCACCCGACGAAGGG+GGG | - | chr6_3:22378833-22378852 | None:intergenic | 65.0% | |
| CAAGCACCACCCGACGAAGG+GGG | - | chr6_3:22378834-22378853 | None:intergenic | 65.0% | |
| CGTCGGGTGGTGCTTGTGTG+GGG | + | chr6_3:22378838-22378857 | Msa0944940:CDS | 65.0% | |
| GTCGGGTGGTGCTTGTGTGG+GGG | + | chr6_3:22378839-22378858 | Msa0944940:CDS | 65.0% | |
| TCGGGTGGTGCTTGTGTGGG+GGG | + | chr6_3:22378840-22378859 | Msa0944940:CDS | 65.0% | |
| !! | GCCATCAGCTGTCGGCTCGT+TGG | - | chr6_3:22378909-22378928 | None:intergenic | 65.0% |
| TCTTCTGTCGTGCGACCCGG+CGG | + | chr6_3:22379010-22379029 | Msa0944940:CDS | 65.0% | |
| CAGGTCGCACATAAGCCGCC+GGG | - | chr6_3:22379028-22379047 | None:intergenic | 65.0% | |
| GGCGGCTTATGTGCGACCTG+TGG | + | chr6_3:22379028-22379047 | Msa0944940:CDS | 65.0% | |
| GCCCGCCCCGAACAAATAGG+AGG | - | chr6_3:22379060-22379079 | None:intergenic | 65.0% | |
| !! | AAGGGTGCTGCCGTGCCACG+AGG | - | chr6_3:22378291-22378310 | None:intergenic | 70.0% |
| CAGCAAAGCGTGAGCGGGCG+CGG | + | chr6_3:22378676-22378695 | Msa0944940:CDS | 70.0% | |
| GGGGGGACGGGGAAAGCTAC+AGG | - | chr6_3:22378816-22378835 | None:intergenic | 70.0% | |
| TTCCCCGTCCCCCCTTCGTC+GGG | + | chr6_3:22378822-22378841 | Msa0944940:CDS | 70.0% | |
| ACCACCCGACGAAGGGGGGA+CGG | - | chr6_3:22378829-22378848 | None:intergenic | 70.0% | |
| GCCGCCCGCCCCGAACAAAT+AGG | - | chr6_3:22379063-22379082 | None:intergenic | 70.0% | |
| !! | AAGGGTGCTGCCGTGCCACG+AGG | - | chr6_3:22378291-22378310 | None:intergenic | 70.0% |
| CAGCAAAGCGTGAGCGGGCG+CGG | + | chr6_3:22378676-22378695 | Msa0944940:CDS | 70.0% | |
| GGGGGGACGGGGAAAGCTAC+AGG | - | chr6_3:22378816-22378835 | None:intergenic | 70.0% | |
| TTCCCCGTCCCCCCTTCGTC+GGG | + | chr6_3:22378822-22378841 | Msa0944940:CDS | 70.0% | |
| ACCACCCGACGAAGGGGGGA+CGG | - | chr6_3:22378829-22378848 | None:intergenic | 70.0% | |
| GCCGCCCGCCCCGAACAAAT+AGG | - | chr6_3:22379063-22379082 | None:intergenic | 70.0% | |
| AGCGTGAGCGGGCGCGGAGA+AGG | + | chr6_3:22378682-22378701 | Msa0944940:CDS | 75.0% | |
| CACCCGACGAAGGGGGGACG+GGG | - | chr6_3:22378827-22378846 | None:intergenic | 75.0% | |
| CCACCCGACGAAGGGGGGAC+GGG | - | chr6_3:22378828-22378847 | None:intergenic | 75.0% | |
| AGCGTGAGCGGGCGCGGAGA+AGG | + | chr6_3:22378682-22378701 | Msa0944940:CDS | 75.0% | |
| CACCCGACGAAGGGGGGACG+GGG | - | chr6_3:22378827-22378846 | None:intergenic | 75.0% | |
| CCACCCGACGAAGGGGGGAC+GGG | - | chr6_3:22378828-22378847 | None:intergenic | 75.0% | |
| ! | CCCGTCCCCCCTTCGTCGGG+TGG | + | chr6_3:22378825-22378844 | Msa0944940:CDS | 80.0% |
| ! | CCCGTCCCCCCTTCGTCGGG+TGG | + | chr6_3:22378825-22378844 | Msa0944940:CDS | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6_3 | gene | 22378279 | 22379136 | 22378279 | ID=Msa0944940;Name=Msa0944940 |
| chr6_3 | mRNA | 22378279 | 22379136 | 22378279 | ID=Msa0944940-mRNA-1;Parent=Msa0944940;Name=Msa0944940-mRNA-1;_AED=0.34;_eAED=0.34;_QI=0|-1|0|1|-1|1|1|0|285 |
| chr6_3 | exon | 22378279 | 22379136 | 22378279 | ID=Msa0944940-mRNA-1:exon:6567;Parent=Msa0944940-mRNA-1 |
| chr6_3 | CDS | 22378279 | 22379136 | 22378279 | ID=Msa0944940-mRNA-1:cds;Parent=Msa0944940-mRNA-1 |
| Gene Sequence |
| Protein sequence |
