Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0983190 | GEV11601.1 | 86.228 | 167 | 3 | 1 | 1 | 147 | 33 | 199 | 1.36e-88 | 277 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0983190 | sp|P08743|COX1_OENBE | 56.504 | 246 | 37 | 2 | 1 | 176 | 72 | 317 | 7.13e-63 | 207 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0983190 | A0A6N2KNF4 | 73.980 | 196 | 31 | 1 | 1 | 176 | 72 | 267 | 1.10e-76 | 244 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0026430 | Msa0983190 | -0.804000 | 2.664499e-49 | -8.615850e-47 |
| Msa0034970 | Msa0983190 | -0.820690 | 6.002168e-53 | -8.615850e-47 |
| Msa0054480 | Msa0983190 | -0.808803 | 2.588027e-50 | -8.615850e-47 |
| Msa0069500 | Msa0983190 | 0.842364 | 2.705169e-58 | -8.615850e-47 |
| Msa0069510 | Msa0983190 | 0.822117 | 2.812682e-53 | -8.615850e-47 |
| Msa0069520 | Msa0983190 | 0.811658 | 6.271342e-51 | -8.615850e-47 |
| Msa0657750 | Msa0983190 | -0.802151 | 6.428808e-49 | -8.615850e-47 |
| Msa0697990 | Msa0983190 | 0.891853 | 2.717754e-74 | -8.615850e-47 |
| Msa0709160 | Msa0983190 | -0.819747 | 9.875033e-53 | -8.615850e-47 |
| Msa0721280 | Msa0983190 | -0.816657 | 4.939394e-52 | -8.615850e-47 |
| Msa0175840 | Msa0983190 | -0.810947 | 8.947857e-51 | -8.615850e-47 |
| Msa0220440 | Msa0983190 | -0.817993 | 2.472083e-52 | -8.615850e-47 |
| Msa0983130 | Msa0983190 | 0.811508 | 6.758629e-51 | -8.615850e-47 |
| Msa0983170 | Msa0983190 | 0.909092 | 8.344513e-82 | -8.615850e-47 |
| Msa0983180 | Msa0983190 | 0.890799 | 7.102633e-74 | -8.615850e-47 |
| Msa0983190 | Msa0983210 | 0.907183 | 6.668853e-81 | -8.615850e-47 |
| Msa0983190 | Msa0983220 | 0.867359 | 1.450921e-65 | -8.615850e-47 |
| Msa0983190 | Msa0983230 | 0.841388 | 4.897883e-58 | -8.615850e-47 |
| Msa0983190 | Msa0983260 | 0.888419 | 6.001619e-73 | -8.615850e-47 |
| Msa0983190 | Msa0983300 | 0.903155 | 4.643448e-79 | -8.615850e-47 |
| Msa0983190 | Msa0983310 | 0.835573 | 1.551209e-56 | -8.615850e-47 |
| Msa0983190 | Msa0983320 | 0.881263 | 2.776008e-70 | -8.615850e-47 |
| Msa0983190 | Msa0983350 | 0.880075 | 7.397912e-70 | -8.615850e-47 |
| Msa0983190 | Msa0983360 | 0.827252 | 1.733675e-54 | -8.615850e-47 |
| Msa0983190 | Msa0983460 | 0.937216 | 4.965677e-98 | -8.615850e-47 |
| Msa0983190 | Msa0983490 | 0.874293 | 7.564339e-68 | -8.615850e-47 |
| Msa0983190 | Msa0983500 | 0.918019 | 2.609897e-86 | -8.615850e-47 |
| Msa0983190 | Msa0983520 | 0.987220 | 1.763522e-169 | -8.615850e-47 |
| Msa0983190 | Msa0983530 | 0.887574 | 1.266319e-72 | -8.615850e-47 |
| Msa0983190 | Msa0983540 | 0.919679 | 3.328926e-87 | -8.615850e-47 |
| Msa0983190 | Msa0983550 | 0.823483 | 1.351973e-53 | -8.615850e-47 |
| Msa0983190 | Msa1100050 | -0.808337 | 3.254413e-50 | -8.615850e-47 |
| Msa0983190 | Msa1135470 | -0.812163 | 4.867201e-51 | -8.615850e-47 |
| Msa0983190 | Msa1193290 | -0.809147 | 2.184095e-50 | -8.615850e-47 |
| Msa0983190 | Msa1223870 | -0.804867 | 1.757489e-49 | -8.615850e-47 |
| Msa0983190 | Msa1224580 | 0.805123 | 1.553920e-49 | -8.615850e-47 |
| Msa0983190 | Msa1228620 | 0.909313 | 6.540246e-82 | -8.615850e-47 |
| Msa0983190 | Msa1263290 | 0.801871 | 7.338405e-49 | -8.615850e-47 |
| Msa0983190 | Msa1353470 | -0.800714 | 1.265986e-48 | -8.615850e-47 |
| Msa0983190 | Msa1357890 | -0.819149 | 1.351311e-52 | -8.615850e-47 |
| Msa0983190 | Msa1391960 | 0.815522 | 8.852980e-52 | -8.615850e-47 |
| Msa0983190 | Msa1391970 | 0.878834 | 2.038103e-69 | -8.615850e-47 |
| Msa0983190 | Msa1392010 | 0.882567 | 9.352213e-71 | -8.615850e-47 |
| Msa0983190 | Msa1392020 | 0.817725 | 2.841488e-52 | -8.615850e-47 |
| Msa0983190 | Msa1392030 | 0.907468 | 4.907416e-81 | -8.615850e-47 |
| Msa0983190 | Msa1392120 | 0.932352 | 9.687700e-95 | -8.615850e-47 |
| Msa0983190 | Msa1392160 | 0.911889 | 3.643486e-83 | -8.615850e-47 |
| Msa0983190 | Msa1398090 | -0.818473 | 1.924338e-52 | -8.615850e-47 |
| Msa0983190 | Msa1407600 | -0.806190 | 9.277541e-50 | -8.615850e-47 |
| Msa0983190 | Msa1436930 | 0.821466 | 3.978564e-53 | -8.615850e-47 |
| Msa0983190 | Msa1453860 | 0.804823 | 1.795655e-49 | -8.615850e-47 |
| Msa0983190 | Msa1453870 | 0.820653 | 6.120655e-53 | -8.615850e-47 |
| Msa0983190 | Msa1466540 | -0.815383 | 9.508539e-52 | -8.615850e-47 |
| Msa0253200 | Msa0983190 | -0.816463 | 5.458853e-52 | -8.615850e-47 |
| Msa0261720 | Msa0983190 | -0.812328 | 4.479764e-51 | -8.615850e-47 |
| Msa0271530 | Msa0983190 | -0.808862 | 2.514279e-50 | -8.615850e-47 |
| Msa0292030 | Msa0983190 | -0.818259 | 2.151806e-52 | -8.615850e-47 |
| Msa0326110 | Msa0983190 | -0.807449 | 5.027066e-50 | -8.615850e-47 |
| Msa0337060 | Msa0983190 | -0.806737 | 7.112128e-50 | -8.615850e-47 |
| Msa0902770 | Msa0983190 | 0.802143 | 6.451860e-49 | -8.615850e-47 |
| Msa0908820 | Msa0983190 | 0.811808 | 5.817707e-51 | -8.615850e-47 |
| Msa0908830 | Msa0983190 | 0.923116 | 4.053710e-89 | -8.615850e-47 |
| Msa0908840 | Msa0983190 | 0.891744 | 3.003016e-74 | -8.615850e-47 |
| Msa0908850 | Msa0983190 | 0.989889 | 4.214427e-180 | -8.615850e-47 |
| Msa0908870 | Msa0983190 | 0.904782 | 8.559298e-80 | -8.615850e-47 |
| Msa0908920 | Msa0983190 | 0.901120 | 3.693442e-78 | -8.615850e-47 |
| Msa0908930 | Msa0983190 | 0.884706 | 1.524960e-71 | -8.615850e-47 |
| Msa0919990 | Msa0983190 | 0.823892 | 1.084686e-53 | -8.615850e-47 |
| Msa0920000 | Msa0983190 | 0.813740 | 2.196336e-51 | -8.615850e-47 |
| Msa0920060 | Msa0983190 | 0.880512 | 5.166456e-70 | -8.615850e-47 |
| Msa0923330 | Msa0983190 | -0.801824 | 7.502622e-49 | -8.615850e-47 |
| Msa0933100 | Msa0983190 | -0.805952 | 1.041198e-49 | -8.615850e-47 |
| Msa0944900 | Msa0983190 | 0.919133 | 6.583819e-87 | -8.615850e-47 |
| Msa0944920 | Msa0983190 | 0.992419 | 3.530778e-193 | -8.615850e-47 |
| Msa0944930 | Msa0983190 | 0.888428 | 5.955404e-73 | -8.615850e-47 |
| Msa0944940 | Msa0983190 | 0.921118 | 5.391774e-88 | -8.615850e-47 |
| Msa0944950 | Msa0983190 | 0.808735 | 2.676629e-50 | -8.615850e-47 |
| Msa0944990 | Msa0983190 | 0.885620 | 6.949744e-72 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0983190 | MtrunA17_Chr7g0231291 | 55.512 | 254 | 43 | 2 | 1 | 184 | 72 | 325 | 1.08e-67 | 213 |
| Msa0983190 | MtrunA17_Chr6g0457361 | 64.706 | 204 | 44 | 2 | 1 | 176 | 43 | 246 | 1.45e-66 | 206 |
| Msa0983190 | MtrunA17_MTg0491291 | 56.098 | 246 | 38 | 2 | 1 | 176 | 72 | 317 | 3.62e-63 | 205 |
| Msa0983190 | MtrunA17_Chr8g0336151 | 91.228 | 57 | 5 | 0 | 1 | 57 | 33 | 89 | 4.17e-18 | 77.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0983190 | ATMG01360.1 | 73.214 | 112 | 30 | 0 | 65 | 176 | 206 | 317 | 7.94e-46 | 160 |
| Msa0983190 | ATMG01360.1 | 96.970 | 66 | 2 | 0 | 1 | 66 | 72 | 137 | 9.69e-25 | 102 |
Find 67 sgRNAs with CRISPR-Local
Find 295 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTACTAAGGCTGAGCTTAAT+AGG | 0.252415 | 6_4:+26317453 | None:intergenic |
| AAAGAGATGCTGGTATAATA+TGG | 0.262512 | 6_4:+26317103 | None:intergenic |
| TGGTCTGTTCCGATTCTTAT+AGG | 0.288026 | 6_4:-26317545 | Msa0983190:CDS |
| GTAGAGGTGGGTAGCGGCAC+TGG | 0.337368 | 6_4:-26317434 | Msa0983190:CDS |
| TCAATGCTCTCAGCTGAAAC+AGG | 0.350070 | 6_4:+26315083 | None:intergenic |
| ATGATCAGTATAGGTGTTCT+TGG | 0.354020 | 6_4:-26316960 | Msa0983190:CDS |
| GATTAAATAATATTTCATTC+TGG | 0.357498 | 6_4:-26317499 | Msa0983190:CDS |
| CAGCATCTCTTTCGGTTCTT+CGG | 0.366259 | 6_4:-26317092 | Msa0983190:CDS |
| TTTCGGGAAAACCGGTCTTC+GGG | 0.368369 | 6_4:-26317004 | Msa0983190:CDS |
| TGATAGGTGGATCTGGTAAT+TGG | 0.385519 | 6_4:-26317565 | Msa0983190:CDS |
| ATGGCTGGTAATACCACTTA+AGG | 0.386899 | 6_4:+26317394 | None:intergenic |
| ATACCGGATCCAGGCAGAAT+TGG | 0.414851 | 6_4:+26317050 | None:intergenic |
| GAATAGCTGATCGAGCTCTT+TGG | 0.419815 | 6_4:+26315172 | None:intergenic |
| AAACCGGTCTTCGGGTATCT+AGG | 0.425517 | 6_4:-26316996 | Msa0983190:CDS |
| TATTATACCAGCATCTCTTT+CGG | 0.426497 | 6_4:-26317100 | Msa0983190:CDS |
| ATGGTTATGCCGGCGATGAT+AGG | 0.429615 | 6_4:-26317581 | Msa0983190:CDS |
| GGCACCTCTCTTCCACAGCT+TGG | 0.439450 | 6_4:-26315053 | Msa0983190:CDS |
| AAGAGATGCTGGTATAATAT+GGG | 0.446102 | 6_4:+26317104 | None:intergenic |
| CCGGCGATGATAGGTGGATC+TGG | 0.498305 | 6_4:-26317572 | Msa0983190:CDS |
| GGGTAGCGGCACTGGGTGGA+CGG | 0.500197 | 6_4:-26317426 | Msa0983190:CDS |
| ATTCCAATTCTGCCTGGATC+CGG | 0.502252 | 6_4:-26317053 | Msa0983190:CDS |
| CGAAGAACCGAAAGAGATGC+TGG | 0.508958 | 6_4:+26317093 | None:intergenic |
| AGCTGTGGAAGAGAGGTGCC+AGG | 0.509406 | 6_4:+26315056 | None:intergenic |
| AAGAACACCTATACTGATCA+TGG | 0.511099 | 6_4:+26316962 | None:intergenic |
| ACGAGAGCAAGAAAAGGAAA+TGG | 0.514791 | 6_4:-26315560 | Msa0983190:CDS |
| CAGCTTGGCACGTTTAAAGA+AGG | 0.514988 | 6_4:-26315038 | Msa0983190:CDS |
| GTTTATGCCATGATCAGTAT+AGG | 0.516195 | 6_4:-26316969 | Msa0983190:CDS |
| GCTGAGAGCATTGATTCCCC+TGG | 0.519250 | 6_4:-26315074 | Msa0983190:CDS |
| TCCAGCACGAGAGCAAGAAA+AGG | 0.523770 | 6_4:-26315566 | Msa0983190:intron |
| AATCGTGGAAATGCCATGTC+AGG | 0.525327 | 6_4:+26317518 | None:intergenic |
| TGGCTGGTAATACCACTTAA+GGG | 0.525667 | 6_4:+26317395 | None:intergenic |
| TCAGGTGCACCTATAAGAAT+CGG | 0.526034 | 6_4:+26317536 | None:intergenic |
| TGACTTATGATACCGGATCC+AGG | 0.526443 | 6_4:+26317041 | None:intergenic |
| GCCGCTACCCACCTCTACTA+AGG | 0.532636 | 6_4:+26317439 | None:intergenic |
| GTGTATATTCCAATTCTGCC+TGG | 0.541279 | 6_4:-26317059 | Msa0983190:CDS |
| TCTTTAAACGTGCCAAGCTG+TGG | 0.543459 | 6_4:+26315041 | None:intergenic |
| AAGCTCAGCCTTAGTAGAGG+TGG | 0.544486 | 6_4:-26317447 | Msa0983190:CDS |
| AATAGGAGCAAGAGACTTGG+TGG | 0.546475 | 6_4:+26317470 | None:intergenic |
| CTTAATAGGAGCAAGAGACT+TGG | 0.554057 | 6_4:+26317467 | None:intergenic |
| GGTCTTCGGGTATCTAGGCA+TGG | 0.558047 | 6_4:-26316991 | Msa0983190:CDS |
| GGTTGTATTAAAGTTTCGAT+CGG | 0.559235 | 6_4:+26317154 | None:intergenic |
| AGGTGGGTAGCGGCACTGGG+TGG | 0.559946 | 6_4:-26317430 | Msa0983190:CDS |
| ACGGTCTATCCGCCCTTAAG+TGG | 0.559954 | 6_4:-26317407 | Msa0983190:intron |
| TCTTATAGGTGCACCTGACA+TGG | 0.563347 | 6_4:-26317531 | Msa0983190:CDS |
| GTTATGCCGGCGATGATAGG+TGG | 0.574785 | 6_4:-26317578 | Msa0983190:CDS |
| AACGATATGACTTATGATAC+CGG | 0.575183 | 6_4:+26317034 | None:intergenic |
| AGAATTGGAATATACACCTC+TGG | 0.578532 | 6_4:+26317065 | None:intergenic |
| TGATTCTATCTTGGTGAGAG+TGG | 0.578634 | 6_4:+26315514 | None:intergenic |
| GCCTTAGTAGAGGTGGGTAG+CGG | 0.578884 | 6_4:-26317440 | Msa0983190:CDS |
| ATGTGACCATGATTCTATCT+TGG | 0.581106 | 6_4:+26315505 | None:intergenic |
| CCAGATCCACCTATCATCGC+CGG | 0.586159 | 6_4:+26317572 | None:intergenic |
| CGTGCCAAGCTGTGGAAGAG+AGG | 0.588149 | 6_4:+26315049 | None:intergenic |
| AGCTCAGCCTTAGTAGAGGT+GGG | 0.588345 | 6_4:-26317446 | Msa0983190:CDS |
| ATGCCTAGATACCCGAAGAC+CGG | 0.590186 | 6_4:+26316993 | None:intergenic |
| AATGAAATATTATTTAATCG+TGG | 0.593102 | 6_4:+26317503 | None:intergenic |
| CTCTCACCAAGATAGAATCA+TGG | 0.597303 | 6_4:-26315511 | Msa0983190:CDS |
| TCGGTTCTTCGGTCATCCAG+AGG | 0.598203 | 6_4:-26317081 | Msa0983190:CDS |
| CACTTTGTACACTTTAGTGT+AGG | 0.606083 | 6_4:+26315013 | None:intergenic |
| GCTGTGGAAGAGAGGTGCCA+GGG | 0.611856 | 6_4:+26315057 | None:intergenic |
| CAATGCTCTCAGCTGAAACA+GGG | 0.614847 | 6_4:+26315084 | None:intergenic |
| TGGCGTGACTTGAAGCTGCA+CGG | 0.616873 | 6_4:+26315534 | None:intergenic |
| AGAGATGCTGGTATAATATG+GGG | 0.649125 | 6_4:+26317105 | None:intergenic |
| CTGTGGAAGAGAGGTGCCAG+GGG | 0.658396 | 6_4:+26315058 | None:intergenic |
| ATTAAGCTCAGCCTTAGTAG+AGG | 0.672337 | 6_4:-26317450 | Msa0983190:CDS |
| TGATCGAGCTCTTTGGTACG+CGG | 0.689398 | 6_4:+26315179 | None:intergenic |
| CTACACTAAAGTGTACAAAG+TGG | 0.700982 | 6_4:-26315012 | Msa0983190:CDS |
| CTGGTAATACCACTTAAGGG+CGG | 0.736789 | 6_4:+26317398 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TAAATTTAATTTAAATTAAA+TGG | + | chr6_4:26317376-26317395 | None:intergenic | 0.0% |
| !! | TTAAATTAAATTTATTTAAA+AGG | - | chr6_4:26317382-26317401 | Msa0983190:intron | 0.0% |
| !! | AATGAAATATTATTTAATCG+TGG | + | chr6_4:26315088-26315107 | None:intergenic | 15.0% |
| !! | GATTAAATAATATTTCATTC+TGG | - | chr6_4:26315089-26315108 | Msa0983190:CDS | 15.0% |
| !! | AAAATTGATAGAACCTAAAA+TGG | + | chr6_4:26315275-26315294 | None:intergenic | 20.0% |
| !!! | TAAATATTTTAATTCCTGTG+GGG | + | chr6_4:26315744-26315763 | None:intergenic | 20.0% |
| !!! | CTAAATATTTTAATTCCTGT+GGG | + | chr6_4:26315745-26315764 | None:intergenic | 20.0% |
| !!! | ACTAAATATTTTAATTCCTG+TGG | + | chr6_4:26315746-26315765 | None:intergenic | 20.0% |
| !! | CAGGAATTAAAATATTTAGT+TGG | - | chr6_4:26315746-26315765 | Msa0983190:intron | 20.0% |
| !!! | ACATTTTTAAAAGTTCTGTT+AGG | + | chr6_4:26316417-26316436 | None:intergenic | 20.0% |
| !!! | TAACAGAACTTTTAAAAATG+TGG | - | chr6_4:26316416-26316435 | Msa0983190:intron | 20.0% |
| !!! | AACAGAACTTTTAAAAATGT+GGG | - | chr6_4:26316417-26316436 | Msa0983190:intron | 20.0% |
| !!! | ATATATCTAGTTTATAGAAG+CGG | - | chr6_4:26317113-26317132 | Msa0983190:CDS | 20.0% |
| !! | ATAAACTAAATAAATTGGGT+GGG | + | chr6_4:26317334-26317353 | None:intergenic | 20.0% |
| !!! | ACCCAATTTATTTAGTTTAT+GGG | - | chr6_4:26317334-26317353 | Msa0983190:intron | 20.0% |
| !! | TCCCATAAACTAAATAAATT+GGG | + | chr6_4:26317338-26317357 | None:intergenic | 20.0% |
| ! | TCTACATGATACTTATTATG+TGG | - | chr6_4:26315897-26315916 | Msa0983190:intron | 25.0% |
| ! | TTTCCATTATGTACTTTCTA+TGG | - | chr6_4:26315927-26315946 | Msa0983190:intron | 25.0% |
| ! | TTCCATTATGTACTTTCTAT+GGG | - | chr6_4:26315928-26315947 | Msa0983190:intron | 25.0% |
| !!! | CATTTTTGGATCACTTTTTT+CGG | - | chr6_4:26316036-26316055 | Msa0983190:intron | 25.0% |
| !!! | ATTTTTGGATCACTTTTTTC+GGG | - | chr6_4:26316037-26316056 | Msa0983190:intron | 25.0% |
| ! | GCTTTCTTAACTCTTAAATT+AGG | + | chr6_4:26316476-26316495 | None:intergenic | 25.0% |
| ! | CAAATTTCCAAATTTAACTC+AGG | + | chr6_4:26316553-26316572 | None:intergenic | 25.0% |
| ! | TTCATCAAATCAAATATAGG+TGG | + | chr6_4:26316650-26316669 | None:intergenic | 25.0% |
| ! | TGCTTCATCAAATCAAATAT+AGG | + | chr6_4:26316653-26316672 | None:intergenic | 25.0% |
| ! | AAAAAAAATTGCTTCAGTGA+TGG | + | chr6_4:26316677-26316696 | None:intergenic | 25.0% |
| ! | CATAAACTAAATAAATTGGG+TGG | + | chr6_4:26317335-26317354 | None:intergenic | 25.0% |
| !! | CACCCAATTTATTTAGTTTA+TGG | - | chr6_4:26317333-26317352 | Msa0983190:intron | 25.0% |
| ! | CTCCCATAAACTAAATAAAT+TGG | + | chr6_4:26317339-26317358 | None:intergenic | 25.0% |
| !!! | TTATGCTCTTTTTTTTCTTC+CGG | + | chr6_4:26317463-26317482 | None:intergenic | 25.0% |
| !! | GAAGAAAAAAAAGAGCATAA+AGG | - | chr6_4:26317463-26317482 | Msa0983190:CDS | 25.0% |
| !! | ATTTCTAGTCTTCATCTATC+TGG | - | chr6_4:26315241-26315260 | Msa0983190:intron | 30.0% |
| GGTTGTATTAAAGTTTCGAT+CGG | + | chr6_4:26315437-26315456 | None:intergenic | 30.0% | |
| AAGAGATGCTGGTATAATAT+GGG | + | chr6_4:26315487-26315506 | None:intergenic | 30.0% | |
| AAAGAGATGCTGGTATAATA+TGG | + | chr6_4:26315488-26315507 | None:intergenic | 30.0% | |
| TATTATACCAGCATCTCTTT+CGG | - | chr6_4:26315488-26315507 | Msa0983190:intron | 30.0% | |
| AACGATATGACTTATGATAC+CGG | + | chr6_4:26315557-26315576 | None:intergenic | 30.0% | |
| ! | TCATATCGTTTCGACTTTTT+CGG | - | chr6_4:26315567-26315586 | Msa0983190:intron | 30.0% |
| ! | TGTTCTTGGATTTCTTGTTT+GGG | - | chr6_4:26315642-26315661 | Msa0983190:intron | 30.0% |
| ! | TTCATCTTTTTGTTCACCAT+AGG | - | chr6_4:26315829-26315848 | Msa0983190:intron | 30.0% |
| TCCTGCAAATAAAGCAAAAA+CGG | + | chr6_4:26315956-26315975 | None:intergenic | 30.0% | |
| TATTTGCAGGATTTCACTAT+TGG | - | chr6_4:26315965-26315984 | Msa0983190:intron | 30.0% | |
| ATTTGCAGGATTTCACTATT+GGG | - | chr6_4:26315966-26315985 | Msa0983190:intron | 30.0% | |
| ! | CTTTAGGTCAAATCCATTTT+TGG | - | chr6_4:26316022-26316041 | Msa0983190:intron | 30.0% |
| CGAAAAAAGTGATCCAAAAA+TGG | + | chr6_4:26316038-26316057 | None:intergenic | 30.0% | |
| !!! | TTTTTGGATCACTTTTTTCG+GGG | - | chr6_4:26316038-26316057 | Msa0983190:intron | 30.0% |
| CAGTGGAAATAACATAACAA+GGG | - | chr6_4:26316230-26316249 | Msa0983190:intron | 30.0% | |
| AAGCTATGTGAAGTAAAAGA+AGG | - | chr6_4:26316362-26316381 | Msa0983190:intron | 30.0% | |
| GAAGTAAAAGAAGGAAGAAA+AGG | - | chr6_4:26316371-26316390 | Msa0983190:intron | 30.0% | |
| !! | AGCTATTCTATTTTTCAGTC+CGG | - | chr6_4:26317431-26317450 | Msa0983190:CDS | 30.0% |
| ! | TCTGGTGTTTCATCCATTTT+AGG | - | chr6_4:26315259-26315278 | Msa0983190:intron | 35.0% |
| CCGGAAGTGATAATAAAAGT+GGG | + | chr6_4:26315384-26315403 | None:intergenic | 35.0% | |
| !! | CCCACTTTTATTATCACTTC+CGG | - | chr6_4:26315381-26315400 | Msa0983190:intron | 35.0% |
| ACCGGAAGTGATAATAAAAG+TGG | + | chr6_4:26315385-26315404 | None:intergenic | 35.0% | |
| TTTATTATCACTTCCGGTAC+TGG | - | chr6_4:26315387-26315406 | Msa0983190:intron | 35.0% | |
| AGAGATGCTGGTATAATATG+GGG | + | chr6_4:26315486-26315505 | None:intergenic | 35.0% | |
| AGAATTGGAATATACACCTC+TGG | + | chr6_4:26315526-26315545 | None:intergenic | 35.0% | |
| !! | CATATCGTTTCGACTTTTTC+GGG | - | chr6_4:26315568-26315587 | Msa0983190:intron | 35.0% |
| GTTTATGCCATGATCAGTAT+AGG | - | chr6_4:26315619-26315638 | Msa0983190:intron | 35.0% | |
| AAGAACACCTATACTGATCA+TGG | + | chr6_4:26315629-26315648 | None:intergenic | 35.0% | |
| ATGATCAGTATAGGTGTTCT+TGG | - | chr6_4:26315628-26315647 | Msa0983190:intron | 35.0% | |
| GTGTTCTTGGATTTCTTGTT+TGG | - | chr6_4:26315641-26315660 | Msa0983190:intron | 35.0% | |
| GCTCATCATATGTTTACTGT+GGG | - | chr6_4:26315664-26315683 | Msa0983190:intron | 35.0% | |
| AACCCTACAGCAAATAACAT+GGG | + | chr6_4:26315811-26315830 | None:intergenic | 35.0% | |
| ! | ATCTTTTTGTTCACCATAGG+AGG | - | chr6_4:26315832-26315851 | Msa0983190:intron | 35.0% |
| ! | CTCCCATAGAAAGTACATAA+TGG | + | chr6_4:26315933-26315952 | None:intergenic | 35.0% |
| TATTGGGTGGGTAAAATCTT+TGG | - | chr6_4:26315982-26316001 | Msa0983190:intron | 35.0% | |
| GGATTTGACCTAAAGTTTCA+GGG | + | chr6_4:26316017-26316036 | None:intergenic | 35.0% | |
| TGGATTTGACCTAAAGTTTC+AGG | + | chr6_4:26316018-26316037 | None:intergenic | 35.0% | |
| TAAGAAATGCATGGGAAAGA+GGG | + | chr6_4:26316073-26316092 | None:intergenic | 35.0% | |
| TCTTTCCCATGCATTTCTTA+GGG | - | chr6_4:26316073-26316092 | Msa0983190:intron | 35.0% | |
| ATAAGAGCCAAAACTGCTAA+GGG | + | chr6_4:26316157-26316176 | None:intergenic | 35.0% | |
| TATAAGAGCCAAAACTGCTA+AGG | + | chr6_4:26316158-26316177 | None:intergenic | 35.0% | |
| GCTCTTATATATCCGTAGTT+GGG | - | chr6_4:26316169-26316188 | Msa0983190:intron | 35.0% | |
| GCAGTGGAAATAACATAACA+AGG | - | chr6_4:26316229-26316248 | Msa0983190:intron | 35.0% | |
| TGAACAAAATTCAACCACAC+TGG | - | chr6_4:26316272-26316291 | Msa0983190:intron | 35.0% | |
| AAAATTCAACCACACTGGAA+TGG | - | chr6_4:26316277-26316296 | Msa0983190:intron | 35.0% | |
| ! | TCTCCAAAAGTATGAAAAGC+TGG | + | chr6_4:26316318-26316337 | None:intergenic | 35.0% |
| CTCTTAAATTAGGTCGAAGT+TGG | + | chr6_4:26316466-26316485 | None:intergenic | 35.0% | |
| TACAAGGCCTGAGTTAAATT+TGG | - | chr6_4:26316543-26316562 | Msa0983190:intron | 35.0% | |
| CAAATCAAATATAGGTGGCA+GGG | + | chr6_4:26316645-26316664 | None:intergenic | 35.0% | |
| TCAAATCAAATATAGGTGGC+AGG | + | chr6_4:26316646-26316665 | None:intergenic | 35.0% | |
| TTCGCTACTAACCTGTTAAA+TGG | + | chr6_4:26316715-26316734 | None:intergenic | 35.0% | |
| TTTAACAGGTTAGTAGCGAA+AGG | - | chr6_4:26316715-26316734 | Msa0983190:intron | 35.0% | |
| CTCTTCCCTTAACCTTAATA+GGG | + | chr6_4:26316780-26316799 | None:intergenic | 35.0% | |
| TGTTCAGAGAAGAGAATCAA+AGG | - | chr6_4:26316936-26316955 | Msa0983190:intron | 35.0% | |
| AGAAGAGAATCAAAGGTCAA+CGG | - | chr6_4:26316943-26316962 | Msa0983190:intron | 35.0% | |
| ATGTGACCATGATTCTATCT+TGG | + | chr6_4:26317086-26317105 | None:intergenic | 35.0% | |
| ! | TTTTTGACGATACTGACGAA+TGG | - | chr6_4:26317183-26317202 | Msa0983190:intron | 35.0% |
| ! | GGTGTCCTTTTATTATCTCT+TGG | + | chr6_4:26317267-26317286 | None:intergenic | 35.0% |
| ACTAAATAAATTGGGTGGGT+AGG | + | chr6_4:26317330-26317349 | None:intergenic | 35.0% | |
| !! | AGAGCATAAAGGTTTTTCGA+AGG | - | chr6_4:26317474-26317493 | Msa0983190:CDS | 35.0% |
| CACTTTGTACACTTTAGTGT+AGG | + | chr6_4:26317578-26317597 | None:intergenic | 35.0% | |
| CTACACTAAAGTGTACAAAG+TGG | - | chr6_4:26317576-26317595 | Msa0983190:CDS | 35.0% | |
| TGATAGGTGGATCTGGTAAT+TGG | - | chr6_4:26315023-26315042 | Msa0983190:CDS | 40.0% | |
| TGGTCTGTTCCGATTCTTAT+AGG | - | chr6_4:26315043-26315062 | Msa0983190:CDS | 40.0% | |
| TCAGGTGCACCTATAAGAAT+CGG | + | chr6_4:26315055-26315074 | None:intergenic | 40.0% | |
| CTTAATAGGAGCAAGAGACT+TGG | + | chr6_4:26315124-26315143 | None:intergenic | 40.0% | |
| CTACTAAGGCTGAGCTTAAT+AGG | + | chr6_4:26315138-26315157 | None:intergenic | 40.0% | |
| ATTAAGCTCAGCCTTAGTAG+AGG | - | chr6_4:26315138-26315157 | Msa0983190:CDS | 40.0% | |
| TGGCTGGTAATACCACTTAA+GGG | + | chr6_4:26315196-26315215 | None:intergenic | 40.0% | |
| ATGGCTGGTAATACCACTTA+AGG | + | chr6_4:26315197-26315216 | None:intergenic | 40.0% | |
| GATCTATGCATAGTCATTCC+AGG | + | chr6_4:26315325-26315344 | None:intergenic | 40.0% | |
| ATAGATCACCCCTATTTGTG+TGG | - | chr6_4:26315338-26315357 | Msa0983190:intron | 40.0% | |
| AAAAGTGGGAATGCTGTTAC+TGG | + | chr6_4:26315370-26315389 | None:intergenic | 40.0% | |
| GTGTATATTCCAATTCTGCC+TGG | - | chr6_4:26315529-26315548 | Msa0983190:CDS | 40.0% | |
| !!! | TTCGACTTTTTCGGGAAAAC+CGG | - | chr6_4:26315576-26315595 | Msa0983190:intron | 40.0% |
| GGCTCATCATATGTTTACTG+TGG | - | chr6_4:26315663-26315682 | Msa0983190:intron | 40.0% | |
| !! | ACACCCATGTTATTTGCTGT+AGG | - | chr6_4:26315805-26315824 | Msa0983190:intron | 40.0% |
| !! | CACCCATGTTATTTGCTGTA+GGG | - | chr6_4:26315806-26315825 | Msa0983190:intron | 40.0% |
| GAACCCTACAGCAAATAACA+TGG | + | chr6_4:26315812-26315831 | None:intergenic | 40.0% | |
| !!! | GCCGTTTTTGCTTTATTTGC+AGG | - | chr6_4:26315952-26315971 | Msa0983190:intron | 40.0% |
| CTAAGAAATGCATGGGAAAG+AGG | + | chr6_4:26316074-26316093 | None:intergenic | 40.0% | |
| CTCTTTCCCATGCATTTCTT+AGG | - | chr6_4:26316072-26316091 | Msa0983190:intron | 40.0% | |
| GAAAGCCCTAAGAAATGCAT+GGG | + | chr6_4:26316081-26316100 | None:intergenic | 40.0% | |
| CATGCATTTCTTAGGGCTTT+CGG | - | chr6_4:26316080-26316099 | Msa0983190:intron | 40.0% | |
| ATGCATTTCTTAGGGCTTTC+GGG | - | chr6_4:26316081-26316100 | Msa0983190:intron | 40.0% | |
| GGCTCTTATATATCCGTAGT+TGG | - | chr6_4:26316168-26316187 | Msa0983190:intron | 40.0% | |
| GTAACAATCACTTCAAGCAG+TGG | - | chr6_4:26316213-26316232 | Msa0983190:intron | 40.0% | |
| ! | GAATTTTGTTCAACAGCCCA+AGG | + | chr6_4:26316264-26316283 | None:intergenic | 40.0% |
| ! | CCAAAAGTATGAAAAGCTGG+AGG | + | chr6_4:26316315-26316334 | None:intergenic | 40.0% |
| ! | CCTCCAGCTTTTCATACTTT+TGG | - | chr6_4:26316312-26316331 | Msa0983190:intron | 40.0% |
| GTTAGGTTCTTAGTAGCAGT+CGG | + | chr6_4:26316400-26316419 | None:intergenic | 40.0% | |
| AAAGCAAGCTCAGTTCAGAA+TGG | - | chr6_4:26316491-26316510 | Msa0983190:intron | 40.0% | |
| AGCAAGCCCTATTAAGGTTA+AGG | - | chr6_4:26316771-26316790 | Msa0983190:intron | 40.0% | |
| GCAAGCCCTATTAAGGTTAA+GGG | - | chr6_4:26316772-26316791 | Msa0983190:intron | 40.0% | |
| CCTCTTCCCTTAACCTTAAT+AGG | + | chr6_4:26316781-26316800 | None:intergenic | 40.0% | |
| CCTATTAAGGTTAAGGGAAG+AGG | - | chr6_4:26316778-26316797 | Msa0983190:intron | 40.0% | |
| ACGAGAGCAAGAAAAGGAAA+TGG | - | chr6_4:26317028-26317047 | Msa0983190:CDS | 40.0% | |
| TGATTCTATCTTGGTGAGAG+TGG | + | chr6_4:26317077-26317096 | None:intergenic | 40.0% | |
| CTCTCACCAAGATAGAATCA+TGG | - | chr6_4:26317077-26317096 | Msa0983190:CDS | 40.0% | |
| ACGGGCCAAGAGATAATAAA+AGG | - | chr6_4:26317259-26317278 | Msa0983190:intron | 40.0% | |
| ! | AGCTCTTTTTCTTGCTCTTC+TGG | + | chr6_4:26317288-26317307 | None:intergenic | 40.0% |
| TAAATTGGGTGGGTAGGATA+AGG | + | chr6_4:26317324-26317343 | None:intergenic | 40.0% | |
| TCTTATAGGTGCACCTGACA+TGG | - | chr6_4:26315057-26315076 | Msa0983190:CDS | 45.0% | |
| AATCGTGGAAATGCCATGTC+AGG | + | chr6_4:26315073-26315092 | None:intergenic | 45.0% | |
| AATAGGAGCAAGAGACTTGG+TGG | + | chr6_4:26315121-26315140 | None:intergenic | 45.0% | |
| CTGGTAATACCACTTAAGGG+CGG | + | chr6_4:26315193-26315212 | None:intergenic | 45.0% | |
| AGTGGTATTACCAGCCATTC+TGG | - | chr6_4:26315199-26315218 | Msa0983190:intron | 45.0% | |
| AATCAACTGCTCCTCCAGAA+TGG | + | chr6_4:26315216-26315235 | None:intergenic | 45.0% | |
| ACAACTATCTCCAACATGCG+TGG | - | chr6_4:26315298-26315317 | Msa0983190:intron | 45.0% | |
| TGGAACGGACCACACAAATA+GGG | + | chr6_4:26315350-26315369 | None:intergenic | 45.0% | |
| TGGGAATGCTGTTACTGGAA+CGG | + | chr6_4:26315365-26315384 | None:intergenic | 45.0% | |
| CAGCATCTCTTTCGGTTCTT+CGG | - | chr6_4:26315496-26315515 | Msa0983190:intron | 45.0% | |
| ATTCCAATTCTGCCTGGATC+CGG | - | chr6_4:26315535-26315554 | Msa0983190:CDS | 45.0% | |
| TGACTTATGATACCGGATCC+AGG | + | chr6_4:26315550-26315569 | None:intergenic | 45.0% | |
| !! | TTTTCGGGAAAACCGGTCTT+CGG | - | chr6_4:26315583-26315602 | Msa0983190:intron | 45.0% |
| AGCTATGATCATGGTAGCAG+CGG | + | chr6_4:26315719-26315738 | None:intergenic | 45.0% | |
| TTAGTTGGATCGCTACCATG+TGG | - | chr6_4:26315761-26315780 | Msa0983190:intron | 45.0% | |
| TAGTTGGATCGCTACCATGT+GGG | - | chr6_4:26315762-26315781 | Msa0983190:intron | 45.0% | |
| TATTCCAGTGAGTCCTCCTA+TGG | + | chr6_4:26315848-26315867 | None:intergenic | 45.0% | |
| GAATAGTCCCGGCAAATTCA+GGG | - | chr6_4:26315863-26315882 | Msa0983190:intron | 45.0% | |
| ATGTCTAGCCCTGAATTTGC+CGG | + | chr6_4:26315874-26315893 | None:intergenic | 45.0% | |
| TGCAGGATTTCACTATTGGG+TGG | - | chr6_4:26315969-26315988 | Msa0983190:intron | 45.0% | |
| GCAGGATTTCACTATTGGGT+GGG | - | chr6_4:26315970-26315989 | Msa0983190:intron | 45.0% | |
| GGGTGGGTAAAATCTTTGGT+CGG | - | chr6_4:26315986-26316005 | Msa0983190:intron | 45.0% | |
| CGGACATACCCTGAAACTTT+AGG | - | chr6_4:26316006-26316025 | Msa0983190:intron | 45.0% | |
| CGAAAGCCCTAAGAAATGCA+TGG | + | chr6_4:26316082-26316101 | None:intergenic | 45.0% | |
| GCGTAAGCATCTGGATAATC+TGG | + | chr6_4:26316123-26316142 | None:intergenic | 45.0% | |
| GATTATCCAGATGCTTACGC+TGG | - | chr6_4:26316123-26316142 | Msa0983190:intron | 45.0% | |
| ! | TGGAATGCCCTTAGCAGTTT+TGG | - | chr6_4:26316147-26316166 | Msa0983190:intron | 45.0% |
| GAAACGACGAATCCCAACTA+CGG | + | chr6_4:26316184-26316203 | None:intergenic | 45.0% | |
| TAACAAGGGCGAACATTCCT+TGG | - | chr6_4:26316244-26316263 | Msa0983190:intron | 45.0% | |
| AACAAGGGCGAACATTCCTT+GGG | - | chr6_4:26316245-26316264 | Msa0983190:intron | 45.0% | |
| TGGAGAACTTCCAGCTATCA+AGG | - | chr6_4:26316332-26316351 | Msa0983190:intron | 45.0% | |
| !! | CTTTTCGTCTCCTTGATAGC+TGG | + | chr6_4:26316345-26316364 | None:intergenic | 45.0% |
| GGTACTCAACTCTTCTTCGT+TGG | + | chr6_4:26316445-26316464 | None:intergenic | 45.0% | |
| GAATGGCTACTTACCAACAG+AGG | - | chr6_4:26316508-26316527 | Msa0983190:intron | 45.0% | |
| GAAATTTGATCGAGCTGAGC+CGG | - | chr6_4:26316565-26316584 | Msa0983190:intron | 45.0% | |
| CCTGTTAAATGGAGTTGAGC+TGG | + | chr6_4:26316704-26316723 | None:intergenic | 45.0% | |
| CCAGCTCAACTCCATTTAAC+AGG | - | chr6_4:26316701-26316720 | Msa0983190:intron | 45.0% | |
| CAGGTTAGTAGCGAAAGGTA+AGG | - | chr6_4:26316720-26316739 | Msa0983190:intron | 45.0% | |
| AGAAGGAGCAAGCCCTATTA+AGG | - | chr6_4:26316765-26316784 | Msa0983190:intron | 45.0% | |
| TCAAGGAAGCCGGAAAGAAA+GGG | - | chr6_4:26316831-26316850 | Msa0983190:intron | 45.0% | |
| GAAAGTCGAGCTGAGGAATA+CGG | - | chr6_4:26316876-26316895 | Msa0983190:intron | 45.0% | |
| TGAGGAATACGGAAGAGAAG+CGG | - | chr6_4:26316887-26316906 | Msa0983190:intron | 45.0% | |
| CTCTTCTCTGAACAGCTCTT+AGG | + | chr6_4:26316930-26316949 | None:intergenic | 45.0% | |
| AATCAAAGGTCAACGGCCAA+TGG | - | chr6_4:26316950-26316969 | Msa0983190:intron | 45.0% | |
| ! | TTTAAGATGAATCCGGGGGA+GGG | + | chr6_4:26316979-26316998 | None:intergenic | 45.0% |
| ! | TCGGTTTAAGATGAATCCGG+GGG | + | chr6_4:26316983-26317002 | None:intergenic | 45.0% |
| ! | GTCGGTTTAAGATGAATCCG+GGG | + | chr6_4:26316984-26317003 | None:intergenic | 45.0% |
| ! | GGTCGGTTTAAGATGAATCC+GGG | + | chr6_4:26316985-26317004 | None:intergenic | 45.0% |
| ! | CGGTCGGTTTAAGATGAATC+CGG | + | chr6_4:26316986-26317005 | None:intergenic | 45.0% |
| TGGATGTCATCTCGGCATAT+CGG | + | chr6_4:26317006-26317025 | None:intergenic | 45.0% | |
| TGGACTCTCATTGGTCAAAC+AGG | - | chr6_4:26317232-26317251 | Msa0983190:intron | 45.0% | |
| GAATAGCTGATCGAGCTCTT+TGG | + | chr6_4:26317419-26317438 | None:intergenic | 45.0% | |
| !!! | TTTTTTCTTCCGGCGTCAAC+CGG | + | chr6_4:26317453-26317472 | None:intergenic | 45.0% |
| CAATGCTCTCAGCTGAAACA+GGG | + | chr6_4:26317507-26317526 | None:intergenic | 45.0% | |
| TCAATGCTCTCAGCTGAAAC+AGG | + | chr6_4:26317508-26317527 | None:intergenic | 45.0% | |
| TCTTTAAACGTGCCAAGCTG+TGG | + | chr6_4:26317550-26317569 | None:intergenic | 45.0% | |
| CAGCTTGGCACGTTTAAAGA+AGG | - | chr6_4:26317550-26317569 | Msa0983190:CDS | 45.0% | |
| ATGGTTATGCCGGCGATGAT+AGG | - | chr6_4:26315007-26315026 | Msa0983190:CDS | 50.0% | |
| AAGCTCAGCCTTAGTAGAGG+TGG | - | chr6_4:26315141-26315160 | Msa0983190:CDS | 50.0% | |
| AGCTCAGCCTTAGTAGAGGT+GGG | - | chr6_4:26315142-26315161 | Msa0983190:CDS | 50.0% | |
| GGTATTACCAGCCATTCTGG+AGG | - | chr6_4:26315202-26315221 | Msa0983190:intron | 50.0% | |
| GGAACGGACCACACAAATAG+GGG | + | chr6_4:26315349-26315368 | None:intergenic | 50.0% | |
| CTGGAACGGACCACACAAAT+AGG | + | chr6_4:26315351-26315370 | None:intergenic | 50.0% | |
| !! | TTATCACTTCCGGTACTGGC+AGG | - | chr6_4:26315391-26315410 | Msa0983190:intron | 50.0% |
| !! | TATCACTTCCGGTACTGGCA+GGG | - | chr6_4:26315392-26315411 | Msa0983190:intron | 50.0% |
| ! | ACAACCTTTTCTGATCCCGC+AGG | - | chr6_4:26315451-26315470 | Msa0983190:intron | 50.0% |
| CGAAGAACCGAAAGAGATGC+TGG | + | chr6_4:26315498-26315517 | None:intergenic | 50.0% | |
| ATACCGGATCCAGGCAGAAT+TGG | + | chr6_4:26315541-26315560 | None:intergenic | 50.0% | |
| TTTCGGGAAAACCGGTCTTC+GGG | - | chr6_4:26315584-26315603 | Msa0983190:intron | 50.0% | |
| AAACCGGTCTTCGGGTATCT+AGG | - | chr6_4:26315592-26315611 | Msa0983190:intron | 50.0% | |
| ATGCCTAGATACCCGAAGAC+CGG | + | chr6_4:26315598-26315617 | None:intergenic | 50.0% | |
| TGTGGGGACAGCTATGATCA+TGG | + | chr6_4:26315728-26315747 | None:intergenic | 50.0% | |
| ATGATCATAGCTGTCCCCAC+AGG | - | chr6_4:26315727-26315746 | Msa0983190:intron | 50.0% | |
| AGTTGGATCGCTACCATGTG+GGG | - | chr6_4:26315763-26315782 | Msa0983190:intron | 50.0% | |
| TTGTATAGAACCCCCCCACA+TGG | + | chr6_4:26315779-26315798 | None:intergenic | 50.0% | |
| TTCACCATAGGAGGACTCAC+TGG | - | chr6_4:26315841-26315860 | Msa0983190:intron | 50.0% | |
| AGGACTCACTGGAATAGTCC+CGG | - | chr6_4:26315852-26315871 | Msa0983190:intron | 50.0% | |
| GGAATAGTCCCGGCAAATTC+AGG | - | chr6_4:26315862-26315881 | Msa0983190:intron | 50.0% | |
| TGTCTAGCCCTGAATTTGCC+GGG | + | chr6_4:26315873-26315892 | None:intergenic | 50.0% | |
| ! | GGATAATCTGGAATGCGACG+TGG | + | chr6_4:26316111-26316130 | None:intergenic | 50.0% |
| ATCCAGATGCTTACGCTGGA+TGG | - | chr6_4:26316127-26316146 | Msa0983190:intron | 50.0% | |
| TTCCATCCAGCGTAAGCATC+TGG | + | chr6_4:26316132-26316151 | None:intergenic | 50.0% | |
| TGGGATTCGTCGTTTCTTCG+TGG | - | chr6_4:26316188-26316207 | Msa0983190:intron | 50.0% | |
| TTCAACCACACTGGAATGGC+TGG | - | chr6_4:26316281-26316300 | Msa0983190:intron | 50.0% | |
| TTGTACCAGCCATTCCAGTG+TGG | + | chr6_4:26316289-26316308 | None:intergenic | 50.0% | |
| CTTACCAACAGAGGATAGCG+AGG | - | chr6_4:26316517-26316536 | Msa0983190:intron | 50.0% | |
| AGTACCTCGCTATCCTCTGT+TGG | + | chr6_4:26316524-26316543 | None:intergenic | 50.0% | |
| ! | GAGGATAGCGAGGTACTACA+AGG | - | chr6_4:26316527-26316546 | Msa0983190:intron | 50.0% |
| ATAGTCAGTAGGAGCAGCTC+CGG | + | chr6_4:26316587-26316606 | None:intergenic | 50.0% | |
| ! | CTGCTCCTACTGACTATGAC+TGG | - | chr6_4:26316590-26316609 | Msa0983190:intron | 50.0% |
| GCTGTCCAGTCATAGTCAGT+AGG | + | chr6_4:26316598-26316617 | None:intergenic | 50.0% | |
| TGACTATGACTGGACAGCAG+TGG | - | chr6_4:26316600-26316619 | Msa0983190:intron | 50.0% | |
| GGTAAGGCTTAATTCCCGAG+TGG | - | chr6_4:26316736-26316755 | Msa0983190:intron | 50.0% | |
| CTCAAGGAAGCCGGAAAGAA+AGG | - | chr6_4:26316830-26316849 | Msa0983190:intron | 50.0% | |
| GTCTTGAGGCCCTTTCTTTC+CGG | + | chr6_4:26316843-26316862 | None:intergenic | 50.0% | |
| AAAGGGCCTCAAGACAGCTT+CGG | - | chr6_4:26316848-26316867 | Msa0983190:intron | 50.0% | |
| ! | GTTTAAGATGAATCCGGGGG+AGG | + | chr6_4:26316980-26316999 | None:intergenic | 50.0% |
| TGTCATCTCGGCATATCGGT+CGG | + | chr6_4:26317002-26317021 | None:intergenic | 50.0% | |
| TCTCGTGCTGGATGTCATCT+CGG | + | chr6_4:26317014-26317033 | None:intergenic | 50.0% | |
| TCCAGCACGAGAGCAAGAAA+AGG | - | chr6_4:26317022-26317041 | Msa0983190:CDS | 50.0% | |
| ! | TCCTTTTCTTGCTCTCGTGC+TGG | + | chr6_4:26317026-26317045 | None:intergenic | 50.0% |
| CAATCGACACTGGTAGCCAT+CGG | - | chr6_4:26317141-26317160 | Msa0983190:CDS | 50.0% | |
| AATCGACACTGGTAGCCATC+GGG | - | chr6_4:26317142-26317161 | Msa0983190:CDS | 50.0% | |
| GAATCTGATGAGCTCCAGTC+TGG | - | chr6_4:26317212-26317231 | Msa0983190:intron | 50.0% | |
| TGACCAATGAGAGTCCAGAC+TGG | + | chr6_4:26317229-26317248 | None:intergenic | 50.0% | |
| CATTGGTCAAACAGGCGCAA+CGG | - | chr6_4:26317240-26317259 | Msa0983190:intron | 50.0% | |
| ATTGGTCAAACAGGCGCAAC+GGG | - | chr6_4:26317241-26317260 | Msa0983190:intron | 50.0% | |
| TGATCGAGCTCTTTGGTACG+CGG | + | chr6_4:26317412-26317431 | None:intergenic | 50.0% | |
| !! | TTTTTCAGTCCGGTTGACGC+CGG | - | chr6_4:26317441-26317460 | Msa0983190:CDS | 50.0% |
| GTTATGCCGGCGATGATAGG+TGG | - | chr6_4:26315010-26315029 | Msa0983190:CDS | 55.0% | |
| CCAGATCCACCTATCATCGC+CGG | + | chr6_4:26315019-26315038 | None:intergenic | 55.0% | |
| GCCTTAGTAGAGGTGGGTAG+CGG | - | chr6_4:26315148-26315167 | Msa0983190:CDS | 55.0% | |
| ACGGTCTATCCGCCCTTAAG+TGG | - | chr6_4:26315181-26315200 | Msa0983190:CDS | 55.0% | |
| AACTGCTCCTCCAGAATGGC+TGG | + | chr6_4:26315212-26315231 | None:intergenic | 55.0% | |
| ATCTCCAACATGCGTGGACC+TGG | - | chr6_4:26315304-26315323 | Msa0983190:intron | 55.0% | |
| CATTCCAGGTCCACGCATGT+TGG | + | chr6_4:26315311-26315330 | None:intergenic | 55.0% | |
| !! | ATCACTTCCGGTACTGGCAG+GGG | - | chr6_4:26315393-26315412 | Msa0983190:intron | 55.0% |
| GTAATTGCCCCTGCCAGTAC+CGG | + | chr6_4:26315403-26315422 | None:intergenic | 55.0% | |
| ! | ACCTTTTCTGATCCCGCAGG+AGG | - | chr6_4:26315454-26315473 | Msa0983190:intron | 55.0% |
| ! | CCTTTTCTGATCCCGCAGGA+GGG | - | chr6_4:26315455-26315474 | Msa0983190:intron | 55.0% |
| ! | CTTTTCTGATCCCGCAGGAG+GGG | - | chr6_4:26315456-26315475 | Msa0983190:intron | 55.0% |
| ! | TTTTCTGATCCCGCAGGAGG+GGG | - | chr6_4:26315457-26315476 | Msa0983190:intron | 55.0% |
| TCGGTTCTTCGGTCATCCAG+AGG | - | chr6_4:26315507-26315526 | Msa0983190:CDS | 55.0% | |
| GGTCTTCGGGTATCTAGGCA+TGG | - | chr6_4:26315597-26315616 | Msa0983190:intron | 55.0% | |
| TAGCAGCGGTGAAGTAGGCA+CGG | + | chr6_4:26315705-26315724 | None:intergenic | 55.0% | |
| CATGGTAGCAGCGGTGAAGT+AGG | + | chr6_4:26315710-26315729 | None:intergenic | 55.0% | |
| GTTGGATCGCTACCATGTGG+GGG | - | chr6_4:26315764-26315783 | Msa0983190:intron | 55.0% | |
| TTGGATCGCTACCATGTGGG+GGG | - | chr6_4:26315765-26315784 | Msa0983190:intron | 55.0% | |
| TTCCCGAGTGGACGAGAAGA+AGG | - | chr6_4:26316748-26316767 | Msa0983190:intron | 55.0% | |
| CTCCTTCTTCTCGTCCACTC+GGG | + | chr6_4:26316753-26316772 | None:intergenic | 55.0% | |
| GCTCCTTCTTCTCGTCCACT+CGG | + | chr6_4:26316754-26316773 | None:intergenic | 55.0% | |
| ! | CTAGCTACCGAGCTGACTCA+AGG | - | chr6_4:26316814-26316833 | Msa0983190:intron | 55.0% |
| CTGTTGCCGAAGCTGTCTTG+AGG | + | chr6_4:26316857-26316876 | None:intergenic | 55.0% | |
| GGCAACAGAAAGTCGAGCTG+AGG | - | chr6_4:26316869-26316888 | Msa0983190:intron | 55.0% | |
| CAAAGGTCAACGGCCAATGG+AGG | - | chr6_4:26316953-26316972 | Msa0983190:CDS | 55.0% | |
| TGGCGTGACTTGAAGCTGCA+CGG | + | chr6_4:26317057-26317076 | None:intergenic | 55.0% | |
| AGCGGAATGCCAATCGACAC+TGG | - | chr6_4:26317131-26317150 | Msa0983190:CDS | 55.0% | |
| !! | CGATGGCTACCAGTGTCGAT+TGG | + | chr6_4:26317143-26317162 | None:intergenic | 55.0% |
| GCAGCTGAACTCAATCCCGA+TGG | + | chr6_4:26317160-26317179 | None:intergenic | 55.0% | |
| GCTCCAGTCTGGACTCTCAT+TGG | - | chr6_4:26317223-26317242 | Msa0983190:intron | 55.0% | |
| !! | GCTGAGAGCATTGATTCCCC+TGG | - | chr6_4:26317514-26317533 | Msa0983190:CDS | 55.0% |
| CCGGCGATGATAGGTGGATC+TGG | - | chr6_4:26315016-26315035 | Msa0983190:CDS | 60.0% | |
| GCCGCTACCCACCTCTACTA+AGG | + | chr6_4:26315152-26315171 | None:intergenic | 60.0% | |
| ! | TAGAGGTGGGTAGCGGCACT+GGG | - | chr6_4:26315155-26315174 | Msa0983190:CDS | 60.0% |
| CCCTCCTGCGGGATCAGAAA+AGG | + | chr6_4:26315458-26315477 | None:intergenic | 60.0% | |
| AGCAGCGGTGAAGTAGGCAC+GGG | + | chr6_4:26315704-26315723 | None:intergenic | 60.0% | |
| TGGATCGCTACCATGTGGGG+GGG | - | chr6_4:26315766-26315785 | Msa0983190:intron | 60.0% | |
| CCGGCTTCCTTGAGTCAGCT+CGG | + | chr6_4:26316824-26316843 | None:intergenic | 60.0% | |
| ! | CCGAGCTGACTCAAGGAAGC+CGG | - | chr6_4:26316821-26316840 | Msa0983190:intron | 60.0% |
| !! | CTGTGGAAGAGAGGTGCCAG+GGG | + | chr6_4:26317533-26317552 | None:intergenic | 60.0% |
| !! | GCTGTGGAAGAGAGGTGCCA+GGG | + | chr6_4:26317534-26317553 | None:intergenic | 60.0% |
| !! | AGCTGTGGAAGAGAGGTGCC+AGG | + | chr6_4:26317535-26317554 | None:intergenic | 60.0% |
| GGCACCTCTCTTCCACAGCT+TGG | - | chr6_4:26317535-26317554 | Msa0983190:CDS | 60.0% | |
| CGTGCCAAGCTGTGGAAGAG+AGG | + | chr6_4:26317542-26317561 | None:intergenic | 60.0% | |
| ! | GTAGAGGTGGGTAGCGGCAC+TGG | - | chr6_4:26315154-26315173 | Msa0983190:CDS | 65.0% |
| TATGGGGTCTCCCCCTCCTG+CGG | + | chr6_4:26315470-26315489 | None:intergenic | 65.0% | |
| ! | AGGTGGGTAGCGGCACTGGG+TGG | - | chr6_4:26315158-26315177 | Msa0983190:CDS | 70.0% |
| ! | GGGTAGCGGCACTGGGTGGA+CGG | - | chr6_4:26315162-26315181 | Msa0983190:CDS | 70.0% |
| ATGGGGTCTCCCCCTCCTGC+GGG | + | chr6_4:26315469-26315488 | None:intergenic | 70.0% | |
| ATCCGGGGGAGGGCCTCCAT+TGG | + | chr6_4:26316969-26316988 | None:intergenic | 70.0% | |
| GGCCAATGGAGGCCCTCCCC+CGG | - | chr6_4:26316964-26316983 | Msa0983190:CDS | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6_4 | gene | 26315007 | 26317603 | 26315007 | ID=Msa0983190;Name=Msa0983190 |
| chr6_4 | mRNA | 26315007 | 26317603 | 26315007 | ID=Msa0983190-mRNA-1;Parent=Msa0983190;Name=Msa0983190-mRNA-1;_AED=0.27;_eAED=0.27;_QI=0|0|0|0.75|0|0|4|0|239 |
| chr6_4 | exon | 26317408 | 26317603 | 26317408 | ID=Msa0983190-mRNA-1:exon:7405;Parent=Msa0983190-mRNA-1 |
| chr6_4 | exon | 26316953 | 26317197 | 26316953 | ID=Msa0983190-mRNA-1:exon:7404;Parent=Msa0983190-mRNA-1 |
| chr6_4 | exon | 26315500 | 26315583 | 26315500 | ID=Msa0983190-mRNA-1:exon:7403;Parent=Msa0983190-mRNA-1 |
| chr6_4 | exon | 26315007 | 26315201 | 26315007 | ID=Msa0983190-mRNA-1:exon:7402;Parent=Msa0983190-mRNA-1 |
| chr6_4 | CDS | 26317408 | 26317603 | 26317408 | ID=Msa0983190-mRNA-1:cds;Parent=Msa0983190-mRNA-1 |
| chr6_4 | CDS | 26316953 | 26317197 | 26316953 | ID=Msa0983190-mRNA-1:cds;Parent=Msa0983190-mRNA-1 |
| chr6_4 | CDS | 26315500 | 26315583 | 26315500 | ID=Msa0983190-mRNA-1:cds;Parent=Msa0983190-mRNA-1 |
| chr6_4 | CDS | 26315007 | 26315201 | 26315007 | ID=Msa0983190-mRNA-1:cds;Parent=Msa0983190-mRNA-1 |
| Gene Sequence |
| Protein sequence |
