Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0908830 | KEH16865.1 | 99.298 | 285 | 2 | 0 | 1 | 285 | 14 | 298 | 0.0 | 579 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0908830 | sp|P93286|CCMFC_ARATH | 84.462 | 251 | 31 | 4 | 1 | 247 | 14 | 260 | 2.52e-120 | 354 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0069500 | Msa0908830 | 0.819836 | 9.423708e-53 | -8.615850e-47 |
| Msa0697990 | Msa0908830 | 0.861456 | 1.013009e-63 | -8.615850e-47 |
| Msa0220440 | Msa0908830 | -0.806010 | 1.012163e-49 | -8.615850e-47 |
| Msa0902770 | Msa0908830 | 0.804737 | 1.871467e-49 | -8.615850e-47 |
| Msa0908820 | Msa0908830 | 0.826621 | 2.453487e-54 | -8.615850e-47 |
| Msa0908830 | Msa0908840 | 0.881855 | 1.696261e-70 | -8.615850e-47 |
| Msa0908830 | Msa0908850 | 0.927992 | 5.414895e-92 | -8.615850e-47 |
| Msa0908830 | Msa0908870 | 0.873379 | 1.538766e-67 | -8.615850e-47 |
| Msa0908830 | Msa0908920 | 0.862598 | 4.523404e-64 | -8.615850e-47 |
| Msa0908830 | Msa0908930 | 0.858906 | 5.971037e-63 | -8.615850e-47 |
| Msa0908830 | Msa0920060 | 0.866515 | 2.694388e-65 | -8.615850e-47 |
| Msa0908830 | Msa0944900 | 0.872949 | 2.145977e-67 | -8.615850e-47 |
| Msa0908830 | Msa0944920 | 0.920313 | 1.499308e-87 | -8.615850e-47 |
| Msa0908830 | Msa0944930 | 0.877782 | 4.768526e-69 | -8.615850e-47 |
| Msa0908830 | Msa0944940 | 0.963092 | 1.157250e-121 | -8.615850e-47 |
| Msa0908830 | Msa0944990 | 0.841074 | 5.924548e-58 | -8.615850e-47 |
| Msa0908830 | Msa0983130 | 0.821512 | 3.882484e-53 | -8.615850e-47 |
| Msa0908830 | Msa0983170 | 0.962490 | 6.123951e-121 | -8.615850e-47 |
| Msa0908830 | Msa0983180 | 0.880162 | 6.886099e-70 | -8.615850e-47 |
| Msa0908830 | Msa0983190 | 0.923116 | 4.053710e-89 | -8.615850e-47 |
| Msa0908830 | Msa0983210 | 0.853325 | 2.575444e-61 | -8.615850e-47 |
| Msa0908830 | Msa0983220 | 0.828506 | 8.655043e-55 | -8.615850e-47 |
| Msa0908830 | Msa0983230 | 0.832037 | 1.187671e-55 | -8.615850e-47 |
| Msa0908830 | Msa0983260 | 0.842429 | 2.600620e-58 | -8.615850e-47 |
| Msa0908830 | Msa0983300 | 0.887938 | 9.189320e-73 | -8.615850e-47 |
| Msa0908830 | Msa0983320 | 0.842712 | 2.186911e-58 | -8.615850e-47 |
| Msa0908830 | Msa0983350 | 0.861945 | 7.179440e-64 | -8.615850e-47 |
| Msa0908830 | Msa0983360 | 0.805415 | 1.350106e-49 | -8.615850e-47 |
| Msa0908830 | Msa0983460 | 0.905326 | 4.830187e-80 | -8.615850e-47 |
| Msa0908830 | Msa0983490 | 0.836008 | 1.203349e-56 | -8.615850e-47 |
| Msa0908830 | Msa0983500 | 0.870732 | 1.168228e-66 | -8.615850e-47 |
| Msa0908830 | Msa0983520 | 0.915593 | 4.892658e-85 | -8.615850e-47 |
| Msa0908830 | Msa0983530 | 0.877405 | 6.451614e-69 | -8.615850e-47 |
| Msa0908830 | Msa0983540 | 0.959484 | 1.713109e-117 | -8.615850e-47 |
| Msa0908830 | Msa0983550 | 0.811558 | 6.594271e-51 | -8.615850e-47 |
| Msa0908830 | Msa1228620 | 0.863100 | 3.168255e-64 | -8.615850e-47 |
| Msa0908830 | Msa1391970 | 0.861575 | 9.316717e-64 | -8.615850e-47 |
| Msa0908830 | Msa1392010 | 0.836769 | 7.704501e-57 | -8.615850e-47 |
| Msa0908830 | Msa1392030 | 0.886308 | 3.829185e-72 | -8.615850e-47 |
| Msa0908830 | Msa1392120 | 0.906652 | 1.179646e-80 | -8.615850e-47 |
| Msa0908830 | Msa1392160 | 0.892625 | 1.336211e-74 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0908830 | MtrunA17_MTg0491351 | 100.000 | 285 | 0 | 0 | 1 | 285 | 14 | 298 | 0.0 | 577 |
| Msa0908830 | MtrunA17_Chr6g0457311 | 99.197 | 249 | 2 | 0 | 1 | 249 | 14 | 262 | 0.0 | 506 |
| Msa0908830 | MtrunA17_Chr5g0421701 | 100.000 | 94 | 0 | 0 | 1 | 94 | 14 | 107 | 3.78e-60 | 186 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0908830 | ATMG00180.1 | 86.056 | 251 | 27 | 4 | 1 | 247 | 14 | 260 | 1.22e-124 | 363 |
| Msa0908830 | AT2G07815.1 | 92.063 | 63 | 5 | 0 | 1 | 63 | 186 | 248 | 1.99e-31 | 118 |
Find 98 sgRNAs with CRISPR-Local
Find 252 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTTCGACCCTTCTTTCTAAA+TGG | 0.147379 | 6_2:+9931853 | None:intergenic |
| AAGATGAATATTTCACATTT+TGG | 0.158170 | 6_2:-9931672 | Msa0908830:CDS |
| ATTCTATTACCAGACATAAT+TGG | 0.200005 | 6_2:-9932149 | Msa0908830:CDS |
| GAAAGAAGGGTCGAAGGTTT+TGG | 0.227935 | 6_2:-9931846 | Msa0908830:CDS |
| TATCCCTTCATTCCCTCTTT+TGG | 0.232096 | 6_2:-9932249 | Msa0908830:CDS |
| ATTATAGTCCCATTGGAAAA+AGG | 0.254767 | 6_2:+9932281 | None:intergenic |
| CCCACGCCTCCTATTTGTTC+GGG | 0.312445 | 6_2:-9931584 | Msa0908830:CDS |
| GCCCACGCCTCCTATTTGTT+CGG | 0.316442 | 6_2:-9931585 | Msa0908830:CDS |
| TAGGGTTAGGCCTAAGTCTT+TGG | 0.319027 | 6_2:+9931925 | None:intergenic |
| AGAGCTTCAAGCCCGATTTC+AGG | 0.325181 | 6_2:+9931759 | None:intergenic |
| TGTGAAATATTCATCTTCAT+TGG | 0.340034 | 6_2:+9931678 | None:intergenic |
| CGTTGTTGCTCATTCCCGTT+AGG | 0.367528 | 6_2:+9931906 | None:intergenic |
| GTGCCACCTGAACCTGAAAT+CGG | 0.371160 | 6_2:-9931771 | Msa0908830:CDS |
| TTCGACCCTTCTTTCTAAAT+GGG | 0.377200 | 6_2:+9931854 | None:intergenic |
| TCAAGCCCGATTTCAGGTTC+AGG | 0.383654 | 6_2:+9931765 | None:intergenic |
| TTCTATTACCAGACATAATT+GGG | 0.392242 | 6_2:-9932148 | Msa0908830:CDS |
| ATTATGTCTGGTAATAGAAT+AGG | 0.394739 | 6_2:+9932152 | None:intergenic |
| CATGGAGCGTATGAATTTCC+TGG | 0.395551 | 6_2:+9932214 | None:intergenic |
| CAGCACCCTTACTATTGAAA+TGG | 0.410333 | 6_2:-9932334 | Msa0908830:CDS |
| TCGTCGGGTGGTGCTTGTGT+GGG | 0.410402 | 6_2:-9931798 | Msa0908830:CDS |
| GACGAACCATTTCAATAGTA+AGG | 0.419006 | 6_2:+9932328 | None:intergenic |
| GACTTAGGCCTAACCCTAAC+GGG | 0.420338 | 6_2:-9931920 | Msa0908830:CDS |
| GCCTCCTATTTGTTCGGGGC+GGG | 0.426566 | 6_2:-9931579 | Msa0908830:CDS |
| TGCTCATTCCCGTTAGGGTT+AGG | 0.432567 | 6_2:+9931912 | None:intergenic |
| CAGCTGTCGGCTCGTTGGTA+AGG | 0.438588 | 6_2:+9931734 | None:intergenic |
| GGCGTTTCCAGCTCTAGTTT+CGG | 0.439316 | 6_2:+9932115 | None:intergenic |
| AATGACAAGATGGGGTGCTC+CGG | 0.443575 | 6_2:-9931882 | Msa0908830:CDS |
| GCGTGAACTCTGACTCGATC+CGG | 0.445171 | 6_2:-9931554 | Msa0908830:CDS |
| TTCGTCGGGTGGTGCTTGTG+TGG | 0.447162 | 6_2:-9931799 | Msa0908830:CDS |
| GGGAATGAAGGGATAAGAAT+AGG | 0.452088 | 6_2:+9932257 | None:intergenic |
| GGAGTGTGCATCTGTATGTT+GGG | 0.452607 | 6_2:-9931651 | Msa0908830:CDS |
| AAATAGGAGGCGTGGGCCAC+AGG | 0.457252 | 6_2:+9931591 | None:intergenic |
| AGCGTGAGCGGGCGCGGAGA+AGG | 0.461302 | 6_2:-9931953 | Msa0908830:CDS |
| TAGACCAAAAGAGGGAATGA+AGG | 0.462783 | 6_2:+9932245 | None:intergenic |
| TGGAGTGTGCATCTGTATGT+TGG | 0.464038 | 6_2:-9931652 | Msa0908830:CDS |
| TTATGTCTGGTAATAGAATA+GGG | 0.466280 | 6_2:+9932153 | None:intergenic |
| CGTCGGGTGGTGCTTGTGTG+GGG | 0.474449 | 6_2:-9931797 | Msa0908830:CDS |
| GTTGTTGCTCATTCCCGTTA+GGG | 0.478561 | 6_2:+9931907 | None:intergenic |
| GAGCTTCTCCCAATTATGTC+TGG | 0.479434 | 6_2:+9932140 | None:intergenic |
| ATAAGAAGGAAATGAAGAAC+GGG | 0.482634 | 6_2:+9932077 | None:intergenic |
| ATGACAAGATGGGGTGCTCC+GGG | 0.484900 | 6_2:-9931881 | Msa0908830:CDS |
| AATAGGAATTATAGTCCCAT+TGG | 0.486797 | 6_2:+9932274 | None:intergenic |
| TAGGTCAGCAAAGCGTGAGC+GGG | 0.488590 | 6_2:-9931964 | Msa0908830:CDS |
| GTCGGGTGGTGCTTGTGTGG+GGG | 0.489593 | 6_2:-9931796 | Msa0908830:CDS |
| TGCCACCTGAACCTGAAATC+GGG | 0.498655 | 6_2:-9931770 | Msa0908830:CDS |
| TATGGTCGTGCCTCGTGGCA+CGG | 0.499749 | 6_2:-9932357 | Msa0908830:CDS |
| TTTCCTTCTTATCGAATCCA+AGG | 0.506357 | 6_2:-9932066 | Msa0908830:CDS |
| TCCTATTTGTTCGGGGCGGG+CGG | 0.509665 | 6_2:-9931576 | Msa0908830:CDS |
| CAGCGGCGGGATTGAATACC+CGG | 0.509879 | 6_2:+9931535 | None:intergenic |
| GAATGTAGATAGACCAAAAG+AGG | 0.511343 | 6_2:+9932236 | None:intergenic |
| CAGGAAATTCATACGCTCCA+TGG | 0.512722 | 6_2:-9932213 | Msa0908830:CDS |
| TCGGGTGGTGCTTGTGTGGG+GGG | 0.515078 | 6_2:-9931795 | Msa0908830:CDS |
| CAAGCACCACCCGACGAAGG+GGG | 0.520307 | 6_2:+9931804 | None:intergenic |
| CACAAGCACCACCCGACGAA+GGG | 0.520704 | 6_2:+9931802 | None:intergenic |
| TGTTCTTCTGTCGTGCGACC+CGG | 0.520759 | 6_2:-9931628 | Msa0908830:CDS |
| TCGACCCTTCTTTCTAAATG+GGG | 0.525145 | 6_2:+9931855 | None:intergenic |
| AGCTCATCCGAAACTAGAGC+TGG | 0.527296 | 6_2:-9932122 | Msa0908830:CDS |
| AAGCACCACCCGACGAAGGG+GGG | 0.538997 | 6_2:+9931805 | None:intergenic |
| GATAAGAAGGAAATGAAGAA+CGG | 0.546073 | 6_2:+9932076 | None:intergenic |
| CCCCGAACAAATAGGAGGCG+TGG | 0.547237 | 6_2:+9931583 | None:intergenic |
| CGCCTCCTATTTGTTCGGGG+CGG | 0.549996 | 6_2:-9931580 | Msa0908830:CDS |
| GAAGGATACACCAAAGACTT+AGG | 0.550018 | 6_2:-9931935 | Msa0908830:CDS |
| CGACCCTTCTTTCTAAATGG+GGG | 0.551750 | 6_2:+9931856 | None:intergenic |
| GCAACAACGAAATGACAAGA+TGG | 0.554660 | 6_2:-9931892 | Msa0908830:CDS |
| TTCCTTCTTATCGAATCCAA+GGG | 0.555052 | 6_2:-9932065 | Msa0908830:CDS |
| AGACCAAAAGAGGGAATGAA+GGG | 0.556885 | 6_2:+9932246 | None:intergenic |
| CGTGAACTCTGACTCGATCC+GGG | 0.560154 | 6_2:-9931553 | Msa0908830:CDS |
| GCCATCAGCTGTCGGCTCGT+TGG | 0.560398 | 6_2:+9931729 | None:intergenic |
| CAACAACGAAATGACAAGAT+GGG | 0.561008 | 6_2:-9931891 | Msa0908830:CDS |
| CCCGAACAAATAGGAGGCGT+GGG | 0.562967 | 6_2:+9931584 | None:intergenic |
| TCTTCTCTTTACCACGCGAT+AGG | 0.563452 | 6_2:-9931983 | Msa0908830:CDS |
| AGCCGACAGCTGATGGCTGT+TGG | 0.570681 | 6_2:-9931723 | Msa0908830:CDS |
| ACCAACGAGCCGACAGCTGA+TGG | 0.571630 | 6_2:-9931730 | Msa0908830:CDS |
| ACAAGCACCACCCGACGAAG+GGG | 0.579385 | 6_2:+9931803 | None:intergenic |
| CATTTAGAAAGAAGGGTCGA+AGG | 0.579824 | 6_2:-9931852 | Msa0908830:CDS |
| CAACTGAGCATCTCAGCGGC+GGG | 0.582580 | 6_2:+9931522 | None:intergenic |
| AGCCCGATTTCAGGTTCAGG+TGG | 0.584035 | 6_2:+9931768 | None:intergenic |
| ACACAAGCACCACCCGACGA+AGG | 0.587385 | 6_2:+9931801 | None:intergenic |
| ATAGGTCAGCAAAGCGTGAG+CGG | 0.592191 | 6_2:-9931965 | Msa0908830:CDS |
| AACGGGAACGAAACGAAATG+AGG | 0.592429 | 6_2:+9932094 | None:intergenic |
| AGACTTAGGCCTAACCCTAA+CGG | 0.593764 | 6_2:-9931921 | Msa0908830:CDS |
| GACCAACAGCCATCAGCTGT+CGG | 0.598703 | 6_2:+9931721 | None:intergenic |
| GTCAGTAGAGATGTTCCCAC+AGG | 0.600549 | 6_2:-9932308 | Msa0908830:CDS |
| AAATTCATACGCTCCATGGA+CGG | 0.604092 | 6_2:-9932209 | Msa0908830:CDS |
| TCAACTGAGCATCTCAGCGG+CGG | 0.604364 | 6_2:+9931521 | None:intergenic |
| GCCCGCCCCGAACAAATAGG+AGG | 0.605187 | 6_2:+9931578 | None:intergenic |
| CGCTTTGCTGACCTATCGCG+TGG | 0.606381 | 6_2:+9931972 | None:intergenic |
| ACGAACCATTTCAATAGTAA+GGG | 0.622019 | 6_2:+9932329 | None:intergenic |
| TCATATTTAGAATCTTTCTG+CGG | 0.622913 | 6_2:-9932035 | Msa0908830:CDS |
| AACAACGAAATGACAAGATG+GGG | 0.646716 | 6_2:-9931890 | Msa0908830:CDS |
| AAGGGTGCTGCCGTGCCACG+AGG | 0.653393 | 6_2:+9932347 | None:intergenic |
| GGCGGCTTATGTGCGACCTG+TGG | 0.655333 | 6_2:-9931607 | Msa0908830:CDS |
| AATGTAGATAGACCAAAAGA+GGG | 0.661451 | 6_2:+9932237 | None:intergenic |
| TCCTTCTTATCGAATCCAAG+GGG | 0.669734 | 6_2:-9932064 | Msa0908830:CDS |
| CCTTCTTATCGAATCCAAGG+GGG | 0.687346 | 6_2:-9932063 | Msa0908830:CDS |
| TCTTCTGTCGTGCGACCCGG+CGG | 0.715894 | 6_2:-9931625 | Msa0908830:CDS |
| GAGTCAACTGAGCATCTCAG+CGG | 0.749566 | 6_2:+9931518 | None:intergenic |
| TGTCTGGTAATAGAATAGGG+CGG | 0.798485 | 6_2:+9932156 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAGATGAATATTTCACATTT+TGG | - | chr6_2:9932205-9932224 | Msa0908830:CDS | 20.0% |
| !!! | AAGATGAATATTTCACATTT+TGG | - | chr6_2:9932205-9932224 | Msa0908830:CDS | 20.0% |
| ! | TTATGTCTGGTAATAGAATA+GGG | + | chr6_2:9931727-9931746 | None:intergenic | 25.0% |
| ! | ATTATGTCTGGTAATAGAAT+AGG | + | chr6_2:9931728-9931747 | None:intergenic | 25.0% |
| ! | ATTCTATTACCAGACATAAT+TGG | - | chr6_2:9931728-9931747 | Msa0908830:CDS | 25.0% |
| ! | TTCTATTACCAGACATAATT+GGG | - | chr6_2:9931729-9931748 | Msa0908830:CDS | 25.0% |
| !! | TCATATTTAGAATCTTTCTG+CGG | - | chr6_2:9931842-9931861 | Msa0908830:CDS | 25.0% |
| ! | TGTGAAATATTCATCTTCAT+TGG | + | chr6_2:9932202-9932221 | None:intergenic | 25.0% |
| ! | TTATGTCTGGTAATAGAATA+GGG | + | chr6_2:9931727-9931746 | None:intergenic | 25.0% |
| ! | ATTATGTCTGGTAATAGAAT+AGG | + | chr6_2:9931728-9931747 | None:intergenic | 25.0% |
| ! | ATTCTATTACCAGACATAAT+TGG | - | chr6_2:9931728-9931747 | Msa0908830:CDS | 25.0% |
| ! | TTCTATTACCAGACATAATT+GGG | - | chr6_2:9931729-9931748 | Msa0908830:CDS | 25.0% |
| !! | TCATATTTAGAATCTTTCTG+CGG | - | chr6_2:9931842-9931861 | Msa0908830:CDS | 25.0% |
| ! | TGTGAAATATTCATCTTCAT+TGG | + | chr6_2:9932202-9932221 | None:intergenic | 25.0% |
| ACGAACCATTTCAATAGTAA+GGG | + | chr6_2:9931551-9931570 | None:intergenic | 30.0% | |
| TTATAGTCCCATTGGAAAAA+GGG | + | chr6_2:9931598-9931617 | None:intergenic | 30.0% | |
| ATTATAGTCCCATTGGAAAA+AGG | + | chr6_2:9931599-9931618 | None:intergenic | 30.0% | |
| AATAGGAATTATAGTCCCAT+TGG | + | chr6_2:9931606-9931625 | None:intergenic | 30.0% | |
| AATGTAGATAGACCAAAAGA+GGG | + | chr6_2:9931643-9931662 | None:intergenic | 30.0% | |
| ATAAGAAGGAAATGAAGAAC+GGG | + | chr6_2:9931803-9931822 | None:intergenic | 30.0% | |
| GATAAGAAGGAAATGAAGAA+CGG | + | chr6_2:9931804-9931823 | None:intergenic | 30.0% | |
| ACGAACCATTTCAATAGTAA+GGG | + | chr6_2:9931551-9931570 | None:intergenic | 30.0% | |
| TTATAGTCCCATTGGAAAAA+GGG | + | chr6_2:9931598-9931617 | None:intergenic | 30.0% | |
| ATTATAGTCCCATTGGAAAA+AGG | + | chr6_2:9931599-9931618 | None:intergenic | 30.0% | |
| AATAGGAATTATAGTCCCAT+TGG | + | chr6_2:9931606-9931625 | None:intergenic | 30.0% | |
| AATGTAGATAGACCAAAAGA+GGG | + | chr6_2:9931643-9931662 | None:intergenic | 30.0% | |
| ATAAGAAGGAAATGAAGAAC+GGG | + | chr6_2:9931803-9931822 | None:intergenic | 30.0% | |
| GATAAGAAGGAAATGAAGAA+CGG | + | chr6_2:9931804-9931823 | None:intergenic | 30.0% | |
| GACGAACCATTTCAATAGTA+AGG | + | chr6_2:9931552-9931571 | None:intergenic | 35.0% | |
| TATAGTCCCATTGGAAAAAG+GGG | + | chr6_2:9931597-9931616 | None:intergenic | 35.0% | |
| GAATGTAGATAGACCAAAAG+AGG | + | chr6_2:9931644-9931663 | None:intergenic | 35.0% | |
| ! | TTTTGGTCTATCTACATTCC+AGG | - | chr6_2:9931645-9931664 | Msa0908830:CDS | 35.0% |
| TTTCCTTCTTATCGAATCCA+AGG | - | chr6_2:9931811-9931830 | Msa0908830:CDS | 35.0% | |
| TTCCTTCTTATCGAATCCAA+GGG | - | chr6_2:9931812-9931831 | Msa0908830:CDS | 35.0% | |
| CAACAACGAAATGACAAGAT+GGG | - | chr6_2:9931986-9932005 | Msa0908830:CDS | 35.0% | |
| AACAACGAAATGACAAGATG+GGG | - | chr6_2:9931987-9932006 | Msa0908830:CDS | 35.0% | |
| TTCGACCCTTCTTTCTAAAT+GGG | + | chr6_2:9932026-9932045 | None:intergenic | 35.0% | |
| ! | TCATCTTCATTGGAGCTTTT+TGG | + | chr6_2:9932192-9932211 | None:intergenic | 35.0% |
| GACGAACCATTTCAATAGTA+AGG | + | chr6_2:9931552-9931571 | None:intergenic | 35.0% | |
| TATAGTCCCATTGGAAAAAG+GGG | + | chr6_2:9931597-9931616 | None:intergenic | 35.0% | |
| GAATGTAGATAGACCAAAAG+AGG | + | chr6_2:9931644-9931663 | None:intergenic | 35.0% | |
| ! | TTTTGGTCTATCTACATTCC+AGG | - | chr6_2:9931645-9931664 | Msa0908830:CDS | 35.0% |
| TTTCCTTCTTATCGAATCCA+AGG | - | chr6_2:9931811-9931830 | Msa0908830:CDS | 35.0% | |
| TTCCTTCTTATCGAATCCAA+GGG | - | chr6_2:9931812-9931831 | Msa0908830:CDS | 35.0% | |
| CAACAACGAAATGACAAGAT+GGG | - | chr6_2:9931986-9932005 | Msa0908830:CDS | 35.0% | |
| AACAACGAAATGACAAGATG+GGG | - | chr6_2:9931987-9932006 | Msa0908830:CDS | 35.0% | |
| TTCGACCCTTCTTTCTAAAT+GGG | + | chr6_2:9932026-9932045 | None:intergenic | 35.0% | |
| ! | TCATCTTCATTGGAGCTTTT+TGG | + | chr6_2:9932192-9932211 | None:intergenic | 35.0% |
| CAGCACCCTTACTATTGAAA+TGG | - | chr6_2:9931543-9931562 | Msa0908830:CDS | 40.0% | |
| GGGAATGAAGGGATAAGAAT+AGG | + | chr6_2:9931623-9931642 | None:intergenic | 40.0% | |
| ! | TATCCCTTCATTCCCTCTTT+TGG | - | chr6_2:9931628-9931647 | Msa0908830:CDS | 40.0% |
| AGACCAAAAGAGGGAATGAA+GGG | + | chr6_2:9931634-9931653 | None:intergenic | 40.0% | |
| TAGACCAAAAGAGGGAATGA+AGG | + | chr6_2:9931635-9931654 | None:intergenic | 40.0% | |
| AAATTCATACGCTCCATGGA+CGG | - | chr6_2:9931668-9931687 | Msa0908830:CDS | 40.0% | |
| TGTCTGGTAATAGAATAGGG+CGG | + | chr6_2:9931724-9931743 | None:intergenic | 40.0% | |
| TCCTTCTTATCGAATCCAAG+GGG | - | chr6_2:9931813-9931832 | Msa0908830:CDS | 40.0% | |
| TAAATATGAGAAGTCCCCCT+TGG | + | chr6_2:9931831-9931850 | None:intergenic | 40.0% | |
| GAAGGATACACCAAAGACTT+AGG | - | chr6_2:9931942-9931961 | Msa0908830:CDS | 40.0% | |
| GCAACAACGAAATGACAAGA+TGG | - | chr6_2:9931985-9932004 | Msa0908830:CDS | 40.0% | |
| TCGACCCTTCTTTCTAAATG+GGG | + | chr6_2:9932025-9932044 | None:intergenic | 40.0% | |
| CTTCGACCCTTCTTTCTAAA+TGG | + | chr6_2:9932027-9932046 | None:intergenic | 40.0% | |
| CATTTAGAAAGAAGGGTCGA+AGG | - | chr6_2:9932025-9932044 | Msa0908830:CDS | 40.0% | |
| ! | AAAGAAGGGTCGAAGGTTTT+GGG | - | chr6_2:9932032-9932051 | Msa0908830:CDS | 40.0% |
| ! | TCTTCATTGGAGCTTTTTGG+TGG | + | chr6_2:9932189-9932208 | None:intergenic | 40.0% |
| CAGCACCCTTACTATTGAAA+TGG | - | chr6_2:9931543-9931562 | Msa0908830:CDS | 40.0% | |
| GGGAATGAAGGGATAAGAAT+AGG | + | chr6_2:9931623-9931642 | None:intergenic | 40.0% | |
| ! | TATCCCTTCATTCCCTCTTT+TGG | - | chr6_2:9931628-9931647 | Msa0908830:CDS | 40.0% |
| AGACCAAAAGAGGGAATGAA+GGG | + | chr6_2:9931634-9931653 | None:intergenic | 40.0% | |
| TAGACCAAAAGAGGGAATGA+AGG | + | chr6_2:9931635-9931654 | None:intergenic | 40.0% | |
| AAATTCATACGCTCCATGGA+CGG | - | chr6_2:9931668-9931687 | Msa0908830:CDS | 40.0% | |
| TGTCTGGTAATAGAATAGGG+CGG | + | chr6_2:9931724-9931743 | None:intergenic | 40.0% | |
| TCCTTCTTATCGAATCCAAG+GGG | - | chr6_2:9931813-9931832 | Msa0908830:CDS | 40.0% | |
| TAAATATGAGAAGTCCCCCT+TGG | + | chr6_2:9931831-9931850 | None:intergenic | 40.0% | |
| GAAGGATACACCAAAGACTT+AGG | - | chr6_2:9931942-9931961 | Msa0908830:CDS | 40.0% | |
| GCAACAACGAAATGACAAGA+TGG | - | chr6_2:9931985-9932004 | Msa0908830:CDS | 40.0% | |
| TCGACCCTTCTTTCTAAATG+GGG | + | chr6_2:9932025-9932044 | None:intergenic | 40.0% | |
| CTTCGACCCTTCTTTCTAAA+TGG | + | chr6_2:9932027-9932046 | None:intergenic | 40.0% | |
| CATTTAGAAAGAAGGGTCGA+AGG | - | chr6_2:9932025-9932044 | Msa0908830:CDS | 40.0% | |
| ! | AAAGAAGGGTCGAAGGTTTT+GGG | - | chr6_2:9932032-9932051 | Msa0908830:CDS | 40.0% |
| ! | TCTTCATTGGAGCTTTTTGG+TGG | + | chr6_2:9932189-9932208 | None:intergenic | 40.0% |
| CATGGAGCGTATGAATTTCC+TGG | + | chr6_2:9931666-9931685 | None:intergenic | 45.0% | |
| CAGGAAATTCATACGCTCCA+TGG | - | chr6_2:9931664-9931683 | Msa0908830:CDS | 45.0% | |
| GAGCTTCTCCCAATTATGTC+TGG | + | chr6_2:9931740-9931759 | None:intergenic | 45.0% | |
| AACGGGAACGAAACGAAATG+AGG | + | chr6_2:9931786-9931805 | None:intergenic | 45.0% | |
| CCTTCTTATCGAATCCAAGG+GGG | - | chr6_2:9931814-9931833 | Msa0908830:CDS | 45.0% | |
| TCTTCTCTTTACCACGCGAT+AGG | - | chr6_2:9931894-9931913 | Msa0908830:CDS | 45.0% | |
| TAGGGTTAGGCCTAAGTCTT+TGG | + | chr6_2:9931955-9931974 | None:intergenic | 45.0% | |
| AGACTTAGGCCTAACCCTAA+CGG | - | chr6_2:9931956-9931975 | Msa0908830:CDS | 45.0% | |
| GTTGTTGCTCATTCCCGTTA+GGG | + | chr6_2:9931973-9931992 | None:intergenic | 45.0% | |
| GCACCCCCATTTAGAAAGAA+GGG | - | chr6_2:9932018-9932037 | Msa0908830:CDS | 45.0% | |
| CGACCCTTCTTTCTAAATGG+GGG | + | chr6_2:9932024-9932043 | None:intergenic | 45.0% | |
| ! | GAAAGAAGGGTCGAAGGTTT+TGG | - | chr6_2:9932031-9932050 | Msa0908830:CDS | 45.0% |
| TGGAGTGTGCATCTGTATGT+TGG | - | chr6_2:9932225-9932244 | Msa0908830:CDS | 45.0% | |
| GGAGTGTGCATCTGTATGTT+GGG | - | chr6_2:9932226-9932245 | Msa0908830:CDS | 45.0% | |
| CATGGAGCGTATGAATTTCC+TGG | + | chr6_2:9931666-9931685 | None:intergenic | 45.0% | |
| CAGGAAATTCATACGCTCCA+TGG | - | chr6_2:9931664-9931683 | Msa0908830:CDS | 45.0% | |
| GAGCTTCTCCCAATTATGTC+TGG | + | chr6_2:9931740-9931759 | None:intergenic | 45.0% | |
| AACGGGAACGAAACGAAATG+AGG | + | chr6_2:9931786-9931805 | None:intergenic | 45.0% | |
| CCTTCTTATCGAATCCAAGG+GGG | - | chr6_2:9931814-9931833 | Msa0908830:CDS | 45.0% | |
| TCTTCTCTTTACCACGCGAT+AGG | - | chr6_2:9931894-9931913 | Msa0908830:CDS | 45.0% | |
| TAGGGTTAGGCCTAAGTCTT+TGG | + | chr6_2:9931955-9931974 | None:intergenic | 45.0% | |
| AGACTTAGGCCTAACCCTAA+CGG | - | chr6_2:9931956-9931975 | Msa0908830:CDS | 45.0% | |
| GTTGTTGCTCATTCCCGTTA+GGG | + | chr6_2:9931973-9931992 | None:intergenic | 45.0% | |
| GCACCCCCATTTAGAAAGAA+GGG | - | chr6_2:9932018-9932037 | Msa0908830:CDS | 45.0% | |
| CGACCCTTCTTTCTAAATGG+GGG | + | chr6_2:9932024-9932043 | None:intergenic | 45.0% | |
| ! | GAAAGAAGGGTCGAAGGTTT+TGG | - | chr6_2:9932031-9932050 | Msa0908830:CDS | 45.0% |
| TGGAGTGTGCATCTGTATGT+TGG | - | chr6_2:9932225-9932244 | Msa0908830:CDS | 45.0% | |
| GGAGTGTGCATCTGTATGTT+GGG | - | chr6_2:9932226-9932245 | Msa0908830:CDS | 45.0% | |
| GTCAGTAGAGATGTTCCCAC+AGG | - | chr6_2:9931569-9931588 | Msa0908830:CDS | 50.0% | |
| !! | TTGGAAAAAGGGGCACCTGT+GGG | + | chr6_2:9931587-9931606 | None:intergenic | 50.0% |
| !! | ATTGGAAAAAGGGGCACCTG+TGG | + | chr6_2:9931588-9931607 | None:intergenic | 50.0% |
| ! | ACAGGTGCCCCTTTTTCCAA+TGG | - | chr6_2:9931587-9931606 | Msa0908830:CDS | 50.0% |
| ! | CAGGTGCCCCTTTTTCCAAT+GGG | - | chr6_2:9931588-9931607 | Msa0908830:CDS | 50.0% |
| TCCATGGACGGAGCAAAAAG+TGG | - | chr6_2:9931680-9931699 | Msa0908830:CDS | 50.0% | |
| !!! | TCCACTTTTTGCTCCGTCCA+TGG | + | chr6_2:9931684-9931703 | None:intergenic | 50.0% |
| CGGAGCAAAAAGTGGAGTCT+TGG | - | chr6_2:9931688-9931707 | Msa0908830:CDS | 50.0% | |
| AGCTCATCCGAAACTAGAGC+TGG | - | chr6_2:9931755-9931774 | Msa0908830:CDS | 50.0% | |
| ! | GGCGTTTCCAGCTCTAGTTT+CGG | + | chr6_2:9931765-9931784 | None:intergenic | 50.0% |
| CCCCCTTGGATTCGATAAGA+AGG | + | chr6_2:9931817-9931836 | None:intergenic | 50.0% | |
| ATAGGTCAGCAAAGCGTGAG+CGG | - | chr6_2:9931912-9931931 | Msa0908830:CDS | 50.0% | |
| GACTTAGGCCTAACCCTAAC+GGG | - | chr6_2:9931957-9931976 | Msa0908830:CDS | 50.0% | |
| TGCTCATTCCCGTTAGGGTT+AGG | + | chr6_2:9931968-9931987 | None:intergenic | 50.0% | |
| CGTTGTTGCTCATTCCCGTT+AGG | + | chr6_2:9931974-9931993 | None:intergenic | 50.0% | |
| ! | AATGACAAGATGGGGTGCTC+CGG | - | chr6_2:9931995-9932014 | Msa0908830:CDS | 50.0% |
| !! | TCTTTCTAAATGGGGGTGCC+CGG | + | chr6_2:9932017-9932036 | None:intergenic | 50.0% |
| GGCACCCCCATTTAGAAAGA+AGG | - | chr6_2:9932017-9932036 | Msa0908830:CDS | 50.0% | |
| GTGCCACCTGAACCTGAAAT+CGG | - | chr6_2:9932106-9932125 | Msa0908830:CDS | 50.0% | |
| TGCCACCTGAACCTGAAATC+GGG | - | chr6_2:9932107-9932126 | Msa0908830:CDS | 50.0% | |
| !! | TCAAGCCCGATTTCAGGTTC+AGG | + | chr6_2:9932115-9932134 | None:intergenic | 50.0% |
| AGAGCTTCAAGCCCGATTTC+AGG | + | chr6_2:9932121-9932140 | None:intergenic | 50.0% | |
| GTCAGTAGAGATGTTCCCAC+AGG | - | chr6_2:9931569-9931588 | Msa0908830:CDS | 50.0% | |
| !! | TTGGAAAAAGGGGCACCTGT+GGG | + | chr6_2:9931587-9931606 | None:intergenic | 50.0% |
| !! | ATTGGAAAAAGGGGCACCTG+TGG | + | chr6_2:9931588-9931607 | None:intergenic | 50.0% |
| ! | ACAGGTGCCCCTTTTTCCAA+TGG | - | chr6_2:9931587-9931606 | Msa0908830:CDS | 50.0% |
| ! | CAGGTGCCCCTTTTTCCAAT+GGG | - | chr6_2:9931588-9931607 | Msa0908830:CDS | 50.0% |
| TCCATGGACGGAGCAAAAAG+TGG | - | chr6_2:9931680-9931699 | Msa0908830:CDS | 50.0% | |
| !!! | TCCACTTTTTGCTCCGTCCA+TGG | + | chr6_2:9931684-9931703 | None:intergenic | 50.0% |
| CGGAGCAAAAAGTGGAGTCT+TGG | - | chr6_2:9931688-9931707 | Msa0908830:CDS | 50.0% | |
| AGCTCATCCGAAACTAGAGC+TGG | - | chr6_2:9931755-9931774 | Msa0908830:CDS | 50.0% | |
| ! | GGCGTTTCCAGCTCTAGTTT+CGG | + | chr6_2:9931765-9931784 | None:intergenic | 50.0% |
| CCCCCTTGGATTCGATAAGA+AGG | + | chr6_2:9931817-9931836 | None:intergenic | 50.0% | |
| ATAGGTCAGCAAAGCGTGAG+CGG | - | chr6_2:9931912-9931931 | Msa0908830:CDS | 50.0% | |
| GACTTAGGCCTAACCCTAAC+GGG | - | chr6_2:9931957-9931976 | Msa0908830:CDS | 50.0% | |
| TGCTCATTCCCGTTAGGGTT+AGG | + | chr6_2:9931968-9931987 | None:intergenic | 50.0% | |
| CGTTGTTGCTCATTCCCGTT+AGG | + | chr6_2:9931974-9931993 | None:intergenic | 50.0% | |
| ! | AATGACAAGATGGGGTGCTC+CGG | - | chr6_2:9931995-9932014 | Msa0908830:CDS | 50.0% |
| !! | TCTTTCTAAATGGGGGTGCC+CGG | + | chr6_2:9932017-9932036 | None:intergenic | 50.0% |
| GGCACCCCCATTTAGAAAGA+AGG | - | chr6_2:9932017-9932036 | Msa0908830:CDS | 50.0% | |
| GTGCCACCTGAACCTGAAAT+CGG | - | chr6_2:9932106-9932125 | Msa0908830:CDS | 50.0% | |
| TGCCACCTGAACCTGAAATC+GGG | - | chr6_2:9932107-9932126 | Msa0908830:CDS | 50.0% | |
| !! | TCAAGCCCGATTTCAGGTTC+AGG | + | chr6_2:9932115-9932134 | None:intergenic | 50.0% |
| AGAGCTTCAAGCCCGATTTC+AGG | + | chr6_2:9932121-9932140 | None:intergenic | 50.0% | |
| TAGGTCAGCAAAGCGTGAGC+GGG | - | chr6_2:9931913-9931932 | Msa0908830:CDS | 55.0% | |
| ! | ATGACAAGATGGGGTGCTCC+GGG | - | chr6_2:9931996-9932015 | Msa0908830:CDS | 55.0% |
| !! | AGCCCGATTTCAGGTTCAGG+TGG | + | chr6_2:9932112-9932131 | None:intergenic | 55.0% |
| GACCAACAGCCATCAGCTGT+CGG | + | chr6_2:9932159-9932178 | None:intergenic | 55.0% | |
| TGTTCTTCTGTCGTGCGACC+CGG | - | chr6_2:9932249-9932268 | Msa0908830:CDS | 55.0% | |
| GCCCACGCCTCCTATTTGTT+CGG | - | chr6_2:9932292-9932311 | Msa0908830:CDS | 55.0% | |
| ! | CCCGAACAAATAGGAGGCGT+GGG | + | chr6_2:9932296-9932315 | None:intergenic | 55.0% |
| CCCACGCCTCCTATTTGTTC+GGG | - | chr6_2:9932293-9932312 | Msa0908830:CDS | 55.0% | |
| CCACGCCTCCTATTTGTTCG+GGG | - | chr6_2:9932294-9932313 | Msa0908830:CDS | 55.0% | |
| ! | GCGTGAACTCTGACTCGATC+CGG | - | chr6_2:9932323-9932342 | Msa0908830:CDS | 55.0% |
| ! | CGTGAACTCTGACTCGATCC+GGG | - | chr6_2:9932324-9932343 | Msa0908830:CDS | 55.0% |
| TCAACTGAGCATCTCAGCGG+CGG | + | chr6_2:9932359-9932378 | None:intergenic | 55.0% | |
| TAGGTCAGCAAAGCGTGAGC+GGG | - | chr6_2:9931913-9931932 | Msa0908830:CDS | 55.0% | |
| ! | ATGACAAGATGGGGTGCTCC+GGG | - | chr6_2:9931996-9932015 | Msa0908830:CDS | 55.0% |
| !! | AGCCCGATTTCAGGTTCAGG+TGG | + | chr6_2:9932112-9932131 | None:intergenic | 55.0% |
| GACCAACAGCCATCAGCTGT+CGG | + | chr6_2:9932159-9932178 | None:intergenic | 55.0% | |
| TGTTCTTCTGTCGTGCGACC+CGG | - | chr6_2:9932249-9932268 | Msa0908830:CDS | 55.0% | |
| GCCCACGCCTCCTATTTGTT+CGG | - | chr6_2:9932292-9932311 | Msa0908830:CDS | 55.0% | |
| ! | CCCGAACAAATAGGAGGCGT+GGG | + | chr6_2:9932296-9932315 | None:intergenic | 55.0% |
| CCCACGCCTCCTATTTGTTC+GGG | - | chr6_2:9932293-9932312 | Msa0908830:CDS | 55.0% | |
| CCACGCCTCCTATTTGTTCG+GGG | - | chr6_2:9932294-9932313 | Msa0908830:CDS | 55.0% | |
| ! | GCGTGAACTCTGACTCGATC+CGG | - | chr6_2:9932323-9932342 | Msa0908830:CDS | 55.0% |
| ! | CGTGAACTCTGACTCGATCC+GGG | - | chr6_2:9932324-9932343 | Msa0908830:CDS | 55.0% |
| TCAACTGAGCATCTCAGCGG+CGG | + | chr6_2:9932359-9932378 | None:intergenic | 55.0% | |
| CGCTTTGCTGACCTATCGCG+TGG | + | chr6_2:9931908-9931927 | None:intergenic | 60.0% | |
| ACAAGCACCACCCGACGAAG+GGG | + | chr6_2:9932077-9932096 | None:intergenic | 60.0% | |
| CACAAGCACCACCCGACGAA+GGG | + | chr6_2:9932078-9932097 | None:intergenic | 60.0% | |
| ACACAAGCACCACCCGACGA+AGG | + | chr6_2:9932079-9932098 | None:intergenic | 60.0% | |
| TTCGTCGGGTGGTGCTTGTG+TGG | - | chr6_2:9932078-9932097 | Msa0908830:CDS | 60.0% | |
| TCGTCGGGTGGTGCTTGTGT+GGG | - | chr6_2:9932079-9932098 | Msa0908830:CDS | 60.0% | |
| !! | CAGCTGTCGGCTCGTTGGTA+AGG | + | chr6_2:9932146-9932165 | None:intergenic | 60.0% |
| ACCAACGAGCCGACAGCTGA+TGG | - | chr6_2:9932147-9932166 | Msa0908830:CDS | 60.0% | |
| AGCCGACAGCTGATGGCTGT+TGG | - | chr6_2:9932154-9932173 | Msa0908830:CDS | 60.0% | |
| ACAGGTCGCACATAAGCCGC+CGG | + | chr6_2:9932271-9932290 | None:intergenic | 60.0% | |
| ! | AAATAGGAGGCGTGGGCCAC+AGG | + | chr6_2:9932289-9932308 | None:intergenic | 60.0% |
| CCCCGAACAAATAGGAGGCG+TGG | + | chr6_2:9932297-9932316 | None:intergenic | 60.0% | |
| CGCCTCCTATTTGTTCGGGG+CGG | - | chr6_2:9932297-9932316 | Msa0908830:CDS | 60.0% | |
| GCCTCCTATTTGTTCGGGGC+GGG | - | chr6_2:9932298-9932317 | Msa0908830:CDS | 60.0% | |
| TCCTATTTGTTCGGGGCGGG+CGG | - | chr6_2:9932301-9932320 | Msa0908830:CDS | 60.0% | |
| CAGCGGCGGGATTGAATACC+CGG | + | chr6_2:9932345-9932364 | None:intergenic | 60.0% | |
| CAACTGAGCATCTCAGCGGC+GGG | + | chr6_2:9932358-9932377 | None:intergenic | 60.0% | |
| CGCTTTGCTGACCTATCGCG+TGG | + | chr6_2:9931908-9931927 | None:intergenic | 60.0% | |
| ACAAGCACCACCCGACGAAG+GGG | + | chr6_2:9932077-9932096 | None:intergenic | 60.0% | |
| CACAAGCACCACCCGACGAA+GGG | + | chr6_2:9932078-9932097 | None:intergenic | 60.0% | |
| ACACAAGCACCACCCGACGA+AGG | + | chr6_2:9932079-9932098 | None:intergenic | 60.0% | |
| TTCGTCGGGTGGTGCTTGTG+TGG | - | chr6_2:9932078-9932097 | Msa0908830:CDS | 60.0% | |
| TCGTCGGGTGGTGCTTGTGT+GGG | - | chr6_2:9932079-9932098 | Msa0908830:CDS | 60.0% | |
| !! | CAGCTGTCGGCTCGTTGGTA+AGG | + | chr6_2:9932146-9932165 | None:intergenic | 60.0% |
| ACCAACGAGCCGACAGCTGA+TGG | - | chr6_2:9932147-9932166 | Msa0908830:CDS | 60.0% | |
| AGCCGACAGCTGATGGCTGT+TGG | - | chr6_2:9932154-9932173 | Msa0908830:CDS | 60.0% | |
| ACAGGTCGCACATAAGCCGC+CGG | + | chr6_2:9932271-9932290 | None:intergenic | 60.0% | |
| ! | AAATAGGAGGCGTGGGCCAC+AGG | + | chr6_2:9932289-9932308 | None:intergenic | 60.0% |
| CCCCGAACAAATAGGAGGCG+TGG | + | chr6_2:9932297-9932316 | None:intergenic | 60.0% | |
| CGCCTCCTATTTGTTCGGGG+CGG | - | chr6_2:9932297-9932316 | Msa0908830:CDS | 60.0% | |
| GCCTCCTATTTGTTCGGGGC+GGG | - | chr6_2:9932298-9932317 | Msa0908830:CDS | 60.0% | |
| TCCTATTTGTTCGGGGCGGG+CGG | - | chr6_2:9932301-9932320 | Msa0908830:CDS | 60.0% | |
| CAGCGGCGGGATTGAATACC+CGG | + | chr6_2:9932345-9932364 | None:intergenic | 60.0% | |
| CAACTGAGCATCTCAGCGGC+GGG | + | chr6_2:9932358-9932377 | None:intergenic | 60.0% | |
| TTTCCCCGTCCCCCCTTCGT+CGG | - | chr6_2:9932063-9932082 | Msa0908830:CDS | 65.0% | |
| AAGCACCACCCGACGAAGGG+GGG | + | chr6_2:9932075-9932094 | None:intergenic | 65.0% | |
| CAAGCACCACCCGACGAAGG+GGG | + | chr6_2:9932076-9932095 | None:intergenic | 65.0% | |
| CGTCGGGTGGTGCTTGTGTG+GGG | - | chr6_2:9932080-9932099 | Msa0908830:CDS | 65.0% | |
| GTCGGGTGGTGCTTGTGTGG+GGG | - | chr6_2:9932081-9932100 | Msa0908830:CDS | 65.0% | |
| TCGGGTGGTGCTTGTGTGGG+GGG | - | chr6_2:9932082-9932101 | Msa0908830:CDS | 65.0% | |
| !! | GCCATCAGCTGTCGGCTCGT+TGG | + | chr6_2:9932151-9932170 | None:intergenic | 65.0% |
| TCTTCTGTCGTGCGACCCGG+CGG | - | chr6_2:9932252-9932271 | Msa0908830:CDS | 65.0% | |
| CAGGTCGCACATAAGCCGCC+GGG | + | chr6_2:9932270-9932289 | None:intergenic | 65.0% | |
| GGCGGCTTATGTGCGACCTG+TGG | - | chr6_2:9932270-9932289 | Msa0908830:CDS | 65.0% | |
| GCCCGCCCCGAACAAATAGG+AGG | + | chr6_2:9932302-9932321 | None:intergenic | 65.0% | |
| TTTCCCCGTCCCCCCTTCGT+CGG | - | chr6_2:9932063-9932082 | Msa0908830:CDS | 65.0% | |
| AAGCACCACCCGACGAAGGG+GGG | + | chr6_2:9932075-9932094 | None:intergenic | 65.0% | |
| CAAGCACCACCCGACGAAGG+GGG | + | chr6_2:9932076-9932095 | None:intergenic | 65.0% | |
| CGTCGGGTGGTGCTTGTGTG+GGG | - | chr6_2:9932080-9932099 | Msa0908830:CDS | 65.0% | |
| GTCGGGTGGTGCTTGTGTGG+GGG | - | chr6_2:9932081-9932100 | Msa0908830:CDS | 65.0% | |
| TCGGGTGGTGCTTGTGTGGG+GGG | - | chr6_2:9932082-9932101 | Msa0908830:CDS | 65.0% | |
| !! | GCCATCAGCTGTCGGCTCGT+TGG | + | chr6_2:9932151-9932170 | None:intergenic | 65.0% |
| TCTTCTGTCGTGCGACCCGG+CGG | - | chr6_2:9932252-9932271 | Msa0908830:CDS | 65.0% | |
| CAGGTCGCACATAAGCCGCC+GGG | + | chr6_2:9932270-9932289 | None:intergenic | 65.0% | |
| GGCGGCTTATGTGCGACCTG+TGG | - | chr6_2:9932270-9932289 | Msa0908830:CDS | 65.0% | |
| GCCCGCCCCGAACAAATAGG+AGG | + | chr6_2:9932302-9932321 | None:intergenic | 65.0% | |
| !! | AAGGGTGCTGCCGTGCCACG+AGG | + | chr6_2:9931533-9931552 | None:intergenic | 70.0% |
| CAGCAAAGCGTGAGCGGGCG+CGG | - | chr6_2:9931918-9931937 | Msa0908830:CDS | 70.0% | |
| GGGGGGACGGGGAAAGCTAC+AGG | + | chr6_2:9932058-9932077 | None:intergenic | 70.0% | |
| TTCCCCGTCCCCCCTTCGTC+GGG | - | chr6_2:9932064-9932083 | Msa0908830:CDS | 70.0% | |
| ACCACCCGACGAAGGGGGGA+CGG | + | chr6_2:9932071-9932090 | None:intergenic | 70.0% | |
| GCCGCCCGCCCCGAACAAAT+AGG | + | chr6_2:9932305-9932324 | None:intergenic | 70.0% | |
| !! | AAGGGTGCTGCCGTGCCACG+AGG | + | chr6_2:9931533-9931552 | None:intergenic | 70.0% |
| CAGCAAAGCGTGAGCGGGCG+CGG | - | chr6_2:9931918-9931937 | Msa0908830:CDS | 70.0% | |
| GGGGGGACGGGGAAAGCTAC+AGG | + | chr6_2:9932058-9932077 | None:intergenic | 70.0% | |
| TTCCCCGTCCCCCCTTCGTC+GGG | - | chr6_2:9932064-9932083 | Msa0908830:CDS | 70.0% | |
| ACCACCCGACGAAGGGGGGA+CGG | + | chr6_2:9932071-9932090 | None:intergenic | 70.0% | |
| GCCGCCCGCCCCGAACAAAT+AGG | + | chr6_2:9932305-9932324 | None:intergenic | 70.0% | |
| AGCGTGAGCGGGCGCGGAGA+AGG | - | chr6_2:9931924-9931943 | Msa0908830:CDS | 75.0% | |
| CACCCGACGAAGGGGGGACG+GGG | + | chr6_2:9932069-9932088 | None:intergenic | 75.0% | |
| CCACCCGACGAAGGGGGGAC+GGG | + | chr6_2:9932070-9932089 | None:intergenic | 75.0% | |
| AGCGTGAGCGGGCGCGGAGA+AGG | - | chr6_2:9931924-9931943 | Msa0908830:CDS | 75.0% | |
| CACCCGACGAAGGGGGGACG+GGG | + | chr6_2:9932069-9932088 | None:intergenic | 75.0% | |
| CCACCCGACGAAGGGGGGAC+GGG | + | chr6_2:9932070-9932089 | None:intergenic | 75.0% | |
| ! | CCCGTCCCCCCTTCGTCGGG+TGG | - | chr6_2:9932067-9932086 | Msa0908830:CDS | 80.0% |
| ! | CCCGTCCCCCCTTCGTCGGG+TGG | - | chr6_2:9932067-9932086 | Msa0908830:CDS | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6_2 | gene | 9931521 | 9932378 | 9931521 | ID=Msa0908830;Name=Msa0908830 |
| chr6_2 | mRNA | 9931521 | 9932378 | 9931521 | ID=Msa0908830-mRNA-1;Parent=Msa0908830;Name=Msa0908830-mRNA-1;_AED=0.34;_eAED=0.34;_QI=0|-1|0|1|-1|1|1|0|285 |
| chr6_2 | exon | 9931521 | 9932378 | 9931521 | ID=Msa0908830-mRNA-1:exon:2478;Parent=Msa0908830-mRNA-1 |
| chr6_2 | CDS | 9931521 | 9932378 | 9931521 | ID=Msa0908830-mRNA-1:cds;Parent=Msa0908830-mRNA-1 |
| Gene Sequence |
| Protein sequence |
