Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1000310 | XP_004513015.1 | 60.541 | 555 | 95 | 12 | 1 | 458 | 1 | 528 | 0.0 | 556 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1000310 | sp|Q9SZD6|PETS_ARATH | 46.840 | 269 | 119 | 9 | 1 | 261 | 1 | 253 | 3.07e-59 | 212 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1000310 | A0A1S2Z0W1 | 60.541 | 555 | 95 | 12 | 1 | 458 | 1 | 528 | 0.0 | 556 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0011850 | Msa1000310 | 0.800733 | 1.254524e-48 | -8.615850e-47 |
| Msa0030000 | Msa1000310 | 0.834855 | 2.354503e-56 | -8.615850e-47 |
| Msa0681890 | Msa1000310 | 0.824524 | 7.703868e-54 | -8.615850e-47 |
| Msa0709480 | Msa1000310 | 0.812558 | 3.991689e-51 | -8.615850e-47 |
| Msa0730180 | Msa1000310 | 0.818951 | 1.499015e-52 | -8.615850e-47 |
| Msa0735470 | Msa1000310 | 0.800077 | 1.707077e-48 | -8.615850e-47 |
| Msa0770430 | Msa1000310 | 0.804183 | 2.441048e-49 | -8.615850e-47 |
| Msa0797220 | Msa1000310 | 0.818488 | 1.909400e-52 | -8.615850e-47 |
| Msa0814760 | Msa1000310 | 0.802183 | 6.332056e-49 | -8.615850e-47 |
| Msa0125230 | Msa1000310 | 0.823200 | 1.573862e-53 | -8.615850e-47 |
| Msa0185550 | Msa1000310 | 0.826771 | 2.259848e-54 | -8.615850e-47 |
| Msa0207000 | Msa1000310 | 0.805128 | 1.550361e-49 | -8.615850e-47 |
| Msa0380310 | Msa1000310 | 0.820117 | 8.124504e-53 | -8.615850e-47 |
| Msa0380420 | Msa1000310 | 0.836251 | 1.044117e-56 | -8.615850e-47 |
| Msa0423250 | Msa1000310 | 0.802365 | 5.807027e-49 | -8.615850e-47 |
| Msa0434630 | Msa1000310 | 0.815908 | 7.264756e-52 | -8.615850e-47 |
| Msa0476150 | Msa1000310 | 0.825377 | 4.846715e-54 | -8.615850e-47 |
| Msa0476180 | Msa1000310 | 0.804523 | 2.073747e-49 | -8.615850e-47 |
| Msa1000310 | Msa1000470 | 0.818750 | 1.665535e-52 | -8.615850e-47 |
| Msa1000310 | Msa1020710 | 0.816523 | 5.293387e-52 | -8.615850e-47 |
| Msa1000310 | Msa1028460 | 0.807078 | 6.026242e-50 | -8.615850e-47 |
| Msa1000310 | Msa1084490 | 0.819900 | 9.107256e-53 | -8.615850e-47 |
| Msa1000310 | Msa1099030 | 0.800355 | 1.498613e-48 | -8.615850e-47 |
| Msa1000310 | Msa1125950 | 0.802166 | 6.383439e-49 | -8.615850e-47 |
| Msa1000310 | Msa1159100 | 0.801268 | 9.755450e-49 | -8.615850e-47 |
| Msa1000310 | Msa1166180 | 0.801902 | 7.231365e-49 | -8.615850e-47 |
| Msa1000310 | Msa1171340 | 0.802198 | 6.286726e-49 | -8.615850e-47 |
| Msa1000310 | Msa1210770 | 0.803311 | 3.704544e-49 | -8.615850e-47 |
| Msa1000310 | Msa1229660 | 0.806300 | 8.794830e-50 | -8.615850e-47 |
| Msa1000310 | Msa1237030 | 0.800758 | 1.240115e-48 | -8.615850e-47 |
| Msa1000310 | Msa1309100 | 0.803446 | 3.472509e-49 | -8.615850e-47 |
| Msa1000310 | Msa1310340 | 0.800210 | 1.603952e-48 | -8.615850e-47 |
| Msa1000310 | Msa1368730 | 0.801395 | 9.187602e-49 | -8.615850e-47 |
| Msa1000310 | Msa1375630 | 0.833337 | 5.652028e-56 | -8.615850e-47 |
| Msa1000310 | Msa1376530 | 0.848597 | 5.539441e-60 | -8.615850e-47 |
| Msa1000310 | Msa1376640 | 0.807221 | 5.619201e-50 | -8.615850e-47 |
| Msa1000310 | Msa1462090 | 0.813678 | 2.266606e-51 | -8.615850e-47 |
| Msa0524120 | Msa1000310 | 0.804671 | 1.931563e-49 | -8.615850e-47 |
| Msa0583930 | Msa1000310 | 0.823810 | 1.133258e-53 | -8.615850e-47 |
| Msa0583940 | Msa1000310 | 0.815300 | 9.923746e-52 | -8.615850e-47 |
| Msa0843690 | Msa1000310 | 0.809120 | 2.213396e-50 | -8.615850e-47 |
| Msa0955260 | Msa1000310 | 0.804426 | 2.172786e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1000310 | MtrunA17_Chr6g0486531 | 93.870 | 261 | 15 | 1 | 1 | 261 | 1 | 260 | 5.20e-166 | 495 |
| Msa1000310 | MtrunA17_Chr6g0486351 | 72.381 | 210 | 25 | 3 | 1 | 209 | 1 | 178 | 1.64e-93 | 280 |
| Msa1000310 | MtrunA17_Chr2g0299561 | 90.698 | 43 | 4 | 0 | 359 | 401 | 1212 | 1254 | 1.08e-14 | 77.0 |
| Msa1000310 | MtrunA17_Chr6g0486521 | 63.934 | 61 | 17 | 1 | 392 | 452 | 1104 | 1159 | 1.06e-11 | 67.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1000310 | AT4G29060.2 | 46.840 | 269 | 119 | 9 | 1 | 261 | 1 | 253 | 3.18e-61 | 212 |
| Msa1000310 | AT4G29060.1 | 46.840 | 269 | 119 | 9 | 1 | 261 | 1 | 253 | 3.12e-60 | 212 |
Find 95 sgRNAs with CRISPR-Local
Find 234 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCCGACAGAGCATGATATTA+TGG | 0.209544 | 6_4:+83140408 | None:intergenic |
| CATTTATAATACTTCCTTCT+TGG | 0.224050 | 6_4:+83139292 | None:intergenic |
| TTCCGTTTCTGTGGCTGATA+TGG | 0.275988 | 6_4:+83140195 | None:intergenic |
| ACCAAATCCTCATTCTTTAC+AGG | 0.301884 | 6_4:+83140010 | None:intergenic |
| CCGACAGAGCATGATATTAT+GGG | 0.306224 | 6_4:+83140409 | None:intergenic |
| TTTCCTTCATTTGTCGTCAA+TGG | 0.307996 | 6_4:-83140271 | Msa1000310:CDS |
| CCGGATTTCTCTGCATTGTT+TGG | 0.319815 | 6_4:+83139740 | None:intergenic |
| TTTGGTGCGTTTGTTGATTT+CGG | 0.319864 | 6_4:-83139944 | Msa1000310:CDS |
| CCTTGCAGGTCTTGAACGTT+TGG | 0.336307 | 6_4:+83140048 | None:intergenic |
| TCCTGTAAAGAATGAGGATT+TGG | 0.339661 | 6_4:-83140011 | Msa1000310:CDS |
| CAAGAAGGAAGTATTATAAA+TGG | 0.345251 | 6_4:-83139291 | Msa1000310:CDS |
| GTCTCAAGTGTTGTGTCTCT+TGG | 0.346040 | 6_4:-83139863 | Msa1000310:CDS |
| AAGAATGAGGATTTGGTTCC+CGG | 0.354645 | 6_4:-83140004 | Msa1000310:CDS |
| GGAAATTCTTCGGTTATTCC+TGG | 0.356752 | 6_4:-83140388 | Msa1000310:CDS |
| CTTGTTCCAACTTCATTTGA+AGG | 0.363120 | 6_4:+83140118 | None:intergenic |
| ATCTCTGATTCTGTAACAAC+AGG | 0.365365 | 6_4:+83138979 | None:intergenic |
| GGAAGGAGCTGCTGCAGAAT+TGG | 0.366719 | 6_4:-83139508 | Msa1000310:CDS |
| AGAGGCGGTTGCTGAAAGTT+TGG | 0.370006 | 6_4:-83139250 | Msa1000310:CDS |
| TGTTGATTTCGGAGCTTTCA+TGG | 0.375646 | 6_4:-83139933 | Msa1000310:CDS |
| ATGCGTGAAAACACTGATAC+TGG | 0.393930 | 6_4:-83139779 | Msa1000310:CDS |
| CTACGAAAAGCCAATACAAA+AGG | 0.395148 | 6_4:+83139444 | None:intergenic |
| CACGAAATTTGTTGTAGGTC+AGG | 0.395926 | 6_4:-83139666 | Msa1000310:CDS |
| TGTTGTAGGTCAGGAGTTGC+AGG | 0.415982 | 6_4:-83139657 | Msa1000310:CDS |
| CTTTCATCAGCCACTTCAAC+CGG | 0.420120 | 6_4:+83139138 | None:intergenic |
| AATGCAGAGAAATCCGGCTC+TGG | 0.428192 | 6_4:-83139734 | Msa1000310:CDS |
| GAGGAGGGATTCTTCAAAAT+CGG | 0.434433 | 6_4:-83139711 | Msa1000310:CDS |
| GAATCTCCTTCAAATGAAGT+TGG | 0.434654 | 6_4:-83140124 | Msa1000310:CDS |
| ATGCTCTGTCGGAAATTCTT+CGG | 0.455804 | 6_4:-83140398 | Msa1000310:CDS |
| AGAAATCCGGCTCTGGGAGG+AGG | 0.460173 | 6_4:-83139727 | Msa1000310:CDS |
| GGAAAAGGCACTTGCACAAG+TGG | 0.466422 | 6_4:-83139487 | Msa1000310:CDS |
| GTAAAATCTATCCAACCGTT+TGG | 0.468919 | 6_4:-83139962 | Msa1000310:CDS |
| CCAAACAATGCAGAGAAATC+CGG | 0.471870 | 6_4:-83139740 | Msa1000310:CDS |
| CCAGCATTGGCATCGGACTT+AGG | 0.472690 | 6_4:+83140082 | None:intergenic |
| ATAGAAACTTCATCGGCAAC+AGG | 0.477680 | 6_4:+83140148 | None:intergenic |
| ACAAACGAATATGCTCTTAC+CGG | 0.486432 | 6_4:-83140234 | Msa1000310:CDS |
| CCTAAGTCCGATGCCAATGC+TGG | 0.487792 | 6_4:-83140082 | Msa1000310:CDS |
| TTTCCCCGTAAAAGCTGCCC+CGG | 0.497340 | 6_4:+83139985 | None:intergenic |
| GATAGTGATGCAGTTGAGCC+TGG | 0.497635 | 6_4:-83139003 | Msa1000310:CDS |
| TTTAATAGAAACTGACTCAC+TGG | 0.499823 | 6_4:-83139115 | Msa1000310:CDS |
| CTCCATATCAGCCACAGAAA+CGG | 0.500780 | 6_4:-83140197 | Msa1000310:CDS |
| AGCTGCTGCAGAATTGGAAA+AGG | 0.501682 | 6_4:-83139502 | Msa1000310:CDS |
| AGAGACTGTGGAAGATTCAC+TGG | 0.502591 | 6_4:-83139352 | Msa1000310:CDS |
| CTTGTCAAATAAGCAACTCC+AGG | 0.508349 | 6_4:+83140370 | None:intergenic |
| ACTCCATTGACGACAAATGA+AGG | 0.509746 | 6_4:+83140268 | None:intergenic |
| CGATTCCTCGACAGCTGTTG+TGG | 0.512935 | 6_4:-83139328 | Msa1000310:CDS |
| AACTGACTCACCGGTTGAAG+TGG | 0.514660 | 6_4:-83139148 | Msa1000310:CDS |
| CGTTTCTGTGGCTGATATGG+AGG | 0.521567 | 6_4:+83140198 | None:intergenic |
| AGGAGGGATTCTTCAAAATC+GGG | 0.521900 | 6_4:-83139710 | Msa1000310:CDS |
| TACGAAAAGCCAATACAAAA+GGG | 0.522460 | 6_4:+83139445 | None:intergenic |
| CCCATAATATCATGCTCTGT+CGG | 0.523123 | 6_4:-83140409 | Msa1000310:CDS |
| AAATCAACAAACGCACCAAA+CGG | 0.524034 | 6_4:+83139947 | None:intergenic |
| GATTCTGTAACAACAGGGCC+AGG | 0.526402 | 6_4:+83138985 | None:intergenic |
| TATAAATGGTGCCGCTGAGA+AGG | 0.528405 | 6_4:-83139277 | Msa1000310:CDS |
| GTCTCTTGGACAAGAAGTTA+CGG | 0.535794 | 6_4:-83139849 | Msa1000310:CDS |
| AACTGCATCACTATCTTCCT+CGG | 0.536447 | 6_4:+83139011 | None:intergenic |
| GATTTCGGAGCTTTCATGGA+CGG | 0.540473 | 6_4:-83139929 | Msa1000310:CDS |
| AGAATCCCTCCTCCCAGAGC+CGG | 0.542061 | 6_4:+83139721 | None:intergenic |
| CAACAAACGCACCAAACGGT+TGG | 0.542358 | 6_4:+83139951 | None:intergenic |
| GACAGATACTTCCGTTTCTG+TGG | 0.544252 | 6_4:+83140186 | None:intergenic |
| GAGCATATTCGTTTGTTCTG+AGG | 0.549733 | 6_4:+83140241 | None:intergenic |
| ATGCAGAGAAATCCGGCTCT+GGG | 0.550324 | 6_4:-83139733 | Msa1000310:CDS |
| TGTAGAACCAGCATTGGCAT+CGG | 0.557186 | 6_4:+83140075 | None:intergenic |
| ATTCTTCAAAATCGGGTCCA+AGG | 0.563213 | 6_4:-83139703 | Msa1000310:CDS |
| GAAATCCGGCTCTGGGAGGA+GGG | 0.566218 | 6_4:-83139726 | Msa1000310:CDS |
| AGAATGAGGATTTGGTTCCC+GGG | 0.569157 | 6_4:-83140003 | Msa1000310:CDS |
| GTTGAGTGATACCTTTGTAA+AGG | 0.577562 | 6_4:-83139888 | Msa1000310:CDS |
| AACTGACTCACTGGTTGAAG+TGG | 0.577686 | 6_4:-83139106 | Msa1000310:CDS |
| AGCGTCCACAACAGCTGTCG+AGG | 0.579131 | 6_4:+83139323 | None:intergenic |
| AGCGACGTTGACTATGAAGA+AGG | 0.585064 | 6_4:-83139529 | Msa1000310:CDS |
| CAATGTCGAAACTGACTCAC+CGG | 0.597997 | 6_4:-83139157 | Msa1000310:CDS |
| GAATGAGGATTTGGTTCCCG+GGG | 0.599120 | 6_4:-83140002 | Msa1000310:CDS |
| TGCTGTAAATTCAATTATCG+AGG | 0.603012 | 6_4:-83139208 | Msa1000310:CDS |
| AAATCCTCATTCTTTACAGG+AGG | 0.604341 | 6_4:+83140013 | None:intergenic |
| GTTGTAGGTCAGGAGTTGCA+GGG | 0.609211 | 6_4:-83139656 | Msa1000310:intron |
| ATCAGAAACTGACAATGGAA+AGG | 0.610096 | 6_4:-83139052 | Msa1000310:CDS |
| GATGCCTCCTGTAAAGAATG+AGG | 0.611247 | 6_4:-83140017 | Msa1000310:CDS |
| GACGCTGAAAGCAACCAAGA+AGG | 0.613970 | 6_4:-83139306 | Msa1000310:CDS |
| ACGTTGACTATGAAGAAGGA+AGG | 0.616083 | 6_4:-83139525 | Msa1000310:CDS |
| AGAATTTGTAGCTGCAACCG+AGG | 0.619096 | 6_4:-83139028 | Msa1000310:CDS |
| AGATTCAATAGAAACTTCAT+CGG | 0.622532 | 6_4:+83140141 | None:intergenic |
| ATCATCAACTACAGAGACTG+TGG | 0.627259 | 6_4:-83139364 | Msa1000310:CDS |
| TTCCCCGTAAAAGCTGCCCC+GGG | 0.627643 | 6_4:+83139986 | None:intergenic |
| AAACAATCAGAAACTGACAA+TGG | 0.627847 | 6_4:-83139057 | Msa1000310:CDS |
| CGCTGAGAAGGAAACAGAGG+CGG | 0.632734 | 6_4:-83139265 | Msa1000310:CDS |
| TGGACAAGAAGTTACGGTGA+AGG | 0.643574 | 6_4:-83139843 | Msa1000310:CDS |
| ACTTGAGACATCCTTTACAA+AGG | 0.646143 | 6_4:+83139877 | None:intergenic |
| CGCCTCTGTTTCCTTCTCAG+CGG | 0.656717 | 6_4:+83139266 | None:intergenic |
| CAGAGAAATCCGGCTCTGGG+AGG | 0.678127 | 6_4:-83139730 | Msa1000310:CDS |
| GAAAAGGCACTTGCACAAGT+GGG | 0.679136 | 6_4:-83139486 | Msa1000310:CDS |
| CCAAACGTTCAAGACCTGCA+AGG | 0.680041 | 6_4:-83140048 | Msa1000310:CDS |
| AGTGGCTGATCAAATTGTTG+CGG | 0.682112 | 6_4:-83139088 | Msa1000310:CDS |
| TGCCGCTGAGAAGGAAACAG+AGG | 0.682448 | 6_4:-83139268 | Msa1000310:CDS |
| TCTCTGATTCTGTAACAACA+GGG | 0.691768 | 6_4:+83138980 | None:intergenic |
| AGAAACGGAAGTATCTGTCG+AGG | 0.718434 | 6_4:-83140182 | Msa1000310:CDS |
| TAAGACACGAGTCATCAACT+CGG | 0.750675 | 6_4:-83140303 | Msa1000310:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TAAGGATATTTCTAAATTTT+TGG | - | chr6_4:83139957-83139976 | Msa1000310:CDS | 15.0% |
| !!! | TAAGGATATTTCTAAATTTT+TGG | - | chr6_4:83139957-83139976 | Msa1000310:CDS | 15.0% |
| ! | AGATTCAATAGAAACTTCAT+CGG | + | chr6_4:83139237-83139256 | None:intergenic | 25.0% |
| !!! | AAAAACACGAAATTTGTTGT+AGG | - | chr6_4:83139704-83139723 | Msa1000310:CDS | 25.0% |
| !!! | TTTCTAAATTTTTGGATCAG+AGG | - | chr6_4:83139965-83139984 | Msa1000310:CDS | 25.0% |
| !!! | TTCTAAATTTTTGGATCAGA+GGG | - | chr6_4:83139966-83139985 | Msa1000310:CDS | 25.0% |
| ! | CATTTATAATACTTCCTTCT+TGG | + | chr6_4:83140086-83140105 | None:intergenic | 25.0% |
| !!! | CAAGAAGGAAGTATTATAAA+TGG | - | chr6_4:83140084-83140103 | Msa1000310:CDS | 25.0% |
| ! | AGATTCAATAGAAACTTCAT+CGG | + | chr6_4:83139237-83139256 | None:intergenic | 25.0% |
| !!! | AAAAACACGAAATTTGTTGT+AGG | - | chr6_4:83139704-83139723 | Msa1000310:CDS | 25.0% |
| !!! | TTTCTAAATTTTTGGATCAG+AGG | - | chr6_4:83139965-83139984 | Msa1000310:CDS | 25.0% |
| !!! | TTCTAAATTTTTGGATCAGA+GGG | - | chr6_4:83139966-83139985 | Msa1000310:CDS | 25.0% |
| ! | CATTTATAATACTTCCTTCT+TGG | + | chr6_4:83140086-83140105 | None:intergenic | 25.0% |
| !!! | CAAGAAGGAAGTATTATAAA+TGG | - | chr6_4:83140084-83140103 | Msa1000310:CDS | 25.0% |
| ! | TAACTAGACTCAACTTTTCA+AGG | - | chr6_4:83139042-83139061 | Msa1000310:CDS | 30.0% |
| ! | GTGTTTTTCTTATCTTTCCT+TGG | + | chr6_4:83139692-83139711 | None:intergenic | 30.0% |
| ! | ACTTTTATATCACTTCCTGA+AGG | - | chr6_4:83139770-83139789 | Msa1000310:CDS | 30.0% |
| TACGAAAAGCCAATACAAAA+GGG | + | chr6_4:83139933-83139952 | None:intergenic | 30.0% | |
| !!! | ATTGGCTTTTCGTAGAAATA+AGG | - | chr6_4:83139939-83139958 | Msa1000310:CDS | 30.0% |
| TGCTGTAAATTCAATTATCG+AGG | - | chr6_4:83140167-83140186 | Msa1000310:CDS | 30.0% | |
| ! | TTTAATAGAAACTGACTCAC+TGG | - | chr6_4:83140260-83140279 | Msa1000310:CDS | 30.0% |
| AAACAATCAGAAACTGACAA+TGG | - | chr6_4:83140318-83140337 | Msa1000310:CDS | 30.0% | |
| ! | TAACTAGACTCAACTTTTCA+AGG | - | chr6_4:83139042-83139061 | Msa1000310:CDS | 30.0% |
| ! | GTGTTTTTCTTATCTTTCCT+TGG | + | chr6_4:83139692-83139711 | None:intergenic | 30.0% |
| ! | ACTTTTATATCACTTCCTGA+AGG | - | chr6_4:83139770-83139789 | Msa1000310:CDS | 30.0% |
| TACGAAAAGCCAATACAAAA+GGG | + | chr6_4:83139933-83139952 | None:intergenic | 30.0% | |
| !!! | ATTGGCTTTTCGTAGAAATA+AGG | - | chr6_4:83139939-83139958 | Msa1000310:CDS | 30.0% |
| TGCTGTAAATTCAATTATCG+AGG | - | chr6_4:83140167-83140186 | Msa1000310:CDS | 30.0% | |
| ! | TTTAATAGAAACTGACTCAC+TGG | - | chr6_4:83140260-83140279 | Msa1000310:CDS | 30.0% |
| AAACAATCAGAAACTGACAA+TGG | - | chr6_4:83140318-83140337 | Msa1000310:CDS | 30.0% | |
| TTTCCTTCATTTGTCGTCAA+TGG | - | chr6_4:83139104-83139123 | Msa1000310:CDS | 35.0% | |
| ACAAACGAATATGCTCTTAC+CGG | - | chr6_4:83139141-83139160 | Msa1000310:CDS | 35.0% | |
| GAATCTCCTTCAAATGAAGT+TGG | - | chr6_4:83139251-83139270 | Msa1000310:CDS | 35.0% | |
| CTTGTTCCAACTTCATTTGA+AGG | + | chr6_4:83139260-83139279 | None:intergenic | 35.0% | |
| AAATCCTCATTCTTTACAGG+AGG | + | chr6_4:83139365-83139384 | None:intergenic | 35.0% | |
| TCCTGTAAAGAATGAGGATT+TGG | - | chr6_4:83139364-83139383 | Msa1000310:CDS | 35.0% | |
| ACCAAATCCTCATTCTTTAC+AGG | + | chr6_4:83139368-83139387 | None:intergenic | 35.0% | |
| GTAAAATCTATCCAACCGTT+TGG | - | chr6_4:83139413-83139432 | Msa1000310:CDS | 35.0% | |
| AAATCAACAAACGCACCAAA+CGG | + | chr6_4:83139431-83139450 | None:intergenic | 35.0% | |
| !! | TTTGGTGCGTTTGTTGATTT+CGG | - | chr6_4:83139431-83139450 | Msa1000310:CDS | 35.0% |
| GTTGAGTGATACCTTTGTAA+AGG | - | chr6_4:83139487-83139506 | Msa1000310:CDS | 35.0% | |
| ACTTGAGACATCCTTTACAA+AGG | + | chr6_4:83139501-83139520 | None:intergenic | 35.0% | |
| ! | CGTAACAAACCCTTTTGTAT+TGG | - | chr6_4:83139921-83139940 | Msa1000310:CDS | 35.0% |
| CTACGAAAAGCCAATACAAA+AGG | + | chr6_4:83139934-83139953 | None:intergenic | 35.0% | |
| ATCAGAAACTGACAATGGAA+AGG | - | chr6_4:83140323-83140342 | Msa1000310:CDS | 35.0% | |
| TCTCTGATTCTGTAACAACA+GGG | + | chr6_4:83140398-83140417 | None:intergenic | 35.0% | |
| ATCTCTGATTCTGTAACAAC+AGG | + | chr6_4:83140399-83140418 | None:intergenic | 35.0% | |
| TTTCCTTCATTTGTCGTCAA+TGG | - | chr6_4:83139104-83139123 | Msa1000310:CDS | 35.0% | |
| ACAAACGAATATGCTCTTAC+CGG | - | chr6_4:83139141-83139160 | Msa1000310:CDS | 35.0% | |
| GAATCTCCTTCAAATGAAGT+TGG | - | chr6_4:83139251-83139270 | Msa1000310:CDS | 35.0% | |
| CTTGTTCCAACTTCATTTGA+AGG | + | chr6_4:83139260-83139279 | None:intergenic | 35.0% | |
| AAATCCTCATTCTTTACAGG+AGG | + | chr6_4:83139365-83139384 | None:intergenic | 35.0% | |
| TCCTGTAAAGAATGAGGATT+TGG | - | chr6_4:83139364-83139383 | Msa1000310:CDS | 35.0% | |
| ACCAAATCCTCATTCTTTAC+AGG | + | chr6_4:83139368-83139387 | None:intergenic | 35.0% | |
| GTAAAATCTATCCAACCGTT+TGG | - | chr6_4:83139413-83139432 | Msa1000310:CDS | 35.0% | |
| AAATCAACAAACGCACCAAA+CGG | + | chr6_4:83139431-83139450 | None:intergenic | 35.0% | |
| !! | TTTGGTGCGTTTGTTGATTT+CGG | - | chr6_4:83139431-83139450 | Msa1000310:CDS | 35.0% |
| GTTGAGTGATACCTTTGTAA+AGG | - | chr6_4:83139487-83139506 | Msa1000310:CDS | 35.0% | |
| ACTTGAGACATCCTTTACAA+AGG | + | chr6_4:83139501-83139520 | None:intergenic | 35.0% | |
| ! | CGTAACAAACCCTTTTGTAT+TGG | - | chr6_4:83139921-83139940 | Msa1000310:CDS | 35.0% |
| CTACGAAAAGCCAATACAAA+AGG | + | chr6_4:83139934-83139953 | None:intergenic | 35.0% | |
| ATCAGAAACTGACAATGGAA+AGG | - | chr6_4:83140323-83140342 | Msa1000310:CDS | 35.0% | |
| TCTCTGATTCTGTAACAACA+GGG | + | chr6_4:83140398-83140417 | None:intergenic | 35.0% | |
| ATCTCTGATTCTGTAACAAC+AGG | + | chr6_4:83140399-83140418 | None:intergenic | 35.0% | |
| CCGACAGAGCATGATATTAT+GGG | + | chr6_4:83138969-83138988 | None:intergenic | 40.0% | |
| CCCATAATATCATGCTCTGT+CGG | - | chr6_4:83138966-83138985 | Msa1000310:CDS | 40.0% | |
| TCCGACAGAGCATGATATTA+TGG | + | chr6_4:83138970-83138989 | None:intergenic | 40.0% | |
| ATGCTCTGTCGGAAATTCTT+CGG | - | chr6_4:83138977-83138996 | Msa1000310:CDS | 40.0% | |
| GGAAATTCTTCGGTTATTCC+TGG | - | chr6_4:83138987-83139006 | Msa1000310:CDS | 40.0% | |
| CTTGTCAAATAAGCAACTCC+AGG | + | chr6_4:83139008-83139027 | None:intergenic | 40.0% | |
| TAAGACACGAGTCATCAACT+CGG | - | chr6_4:83139072-83139091 | Msa1000310:CDS | 40.0% | |
| ACTCCATTGACGACAAATGA+AGG | + | chr6_4:83139110-83139129 | None:intergenic | 40.0% | |
| GAGCATATTCGTTTGTTCTG+AGG | + | chr6_4:83139137-83139156 | None:intergenic | 40.0% | |
| !!! | TGGAGGTTCGAGATTTTTTC+CGG | + | chr6_4:83139163-83139182 | None:intergenic | 40.0% |
| ATAGAAACTTCATCGGCAAC+AGG | + | chr6_4:83139230-83139249 | None:intergenic | 40.0% | |
| ! | GGATTTTGTAGAACCAGCAT+TGG | + | chr6_4:83139309-83139328 | None:intergenic | 40.0% |
| ! | AAGAATGAGGATTTGGTTCC+CGG | - | chr6_4:83139371-83139390 | Msa1000310:CDS | 40.0% |
| !! | TGTTGATTTCGGAGCTTTCA+TGG | - | chr6_4:83139442-83139461 | Msa1000310:CDS | 40.0% |
| GTCTCTTGGACAAGAAGTTA+CGG | - | chr6_4:83139526-83139545 | Msa1000310:CDS | 40.0% | |
| ATGCGTGAAAACACTGATAC+TGG | - | chr6_4:83139596-83139615 | Msa1000310:intron | 40.0% | |
| CCAAACAATGCAGAGAAATC+CGG | - | chr6_4:83139635-83139654 | Msa1000310:intron | 40.0% | |
| GAGGAGGGATTCTTCAAAAT+CGG | - | chr6_4:83139664-83139683 | Msa1000310:CDS | 40.0% | |
| AGGAGGGATTCTTCAAAATC+GGG | - | chr6_4:83139665-83139684 | Msa1000310:CDS | 40.0% | |
| ATTCTTCAAAATCGGGTCCA+AGG | - | chr6_4:83139672-83139691 | Msa1000310:CDS | 40.0% | |
| !! | CACGAAATTTGTTGTAGGTC+AGG | - | chr6_4:83139709-83139728 | Msa1000310:CDS | 40.0% |
| TATATCACTTCCTGAAGGAG+AGG | - | chr6_4:83139775-83139794 | Msa1000310:CDS | 40.0% | |
| ! | CGAGTTTTGCGTATCACAAT+AGG | - | chr6_4:83139820-83139839 | Msa1000310:CDS | 40.0% |
| ! | ACGTTGACTATGAAGAAGGA+AGG | - | chr6_4:83139850-83139869 | Msa1000310:CDS | 40.0% |
| ATCATCAACTACAGAGACTG+TGG | - | chr6_4:83140011-83140030 | Msa1000310:CDS | 40.0% | |
| AGTGGCTGATCAAATTGTTG+CGG | - | chr6_4:83140287-83140306 | Msa1000310:CDS | 40.0% | |
| AACTGCATCACTATCTTCCT+CGG | + | chr6_4:83140367-83140386 | None:intergenic | 40.0% | |
| CCGACAGAGCATGATATTAT+GGG | + | chr6_4:83138969-83138988 | None:intergenic | 40.0% | |
| CCCATAATATCATGCTCTGT+CGG | - | chr6_4:83138966-83138985 | Msa1000310:CDS | 40.0% | |
| TCCGACAGAGCATGATATTA+TGG | + | chr6_4:83138970-83138989 | None:intergenic | 40.0% | |
| ATGCTCTGTCGGAAATTCTT+CGG | - | chr6_4:83138977-83138996 | Msa1000310:CDS | 40.0% | |
| GGAAATTCTTCGGTTATTCC+TGG | - | chr6_4:83138987-83139006 | Msa1000310:CDS | 40.0% | |
| CTTGTCAAATAAGCAACTCC+AGG | + | chr6_4:83139008-83139027 | None:intergenic | 40.0% | |
| TAAGACACGAGTCATCAACT+CGG | - | chr6_4:83139072-83139091 | Msa1000310:CDS | 40.0% | |
| ACTCCATTGACGACAAATGA+AGG | + | chr6_4:83139110-83139129 | None:intergenic | 40.0% | |
| GAGCATATTCGTTTGTTCTG+AGG | + | chr6_4:83139137-83139156 | None:intergenic | 40.0% | |
| !!! | TGGAGGTTCGAGATTTTTTC+CGG | + | chr6_4:83139163-83139182 | None:intergenic | 40.0% |
| ATAGAAACTTCATCGGCAAC+AGG | + | chr6_4:83139230-83139249 | None:intergenic | 40.0% | |
| ! | GGATTTTGTAGAACCAGCAT+TGG | + | chr6_4:83139309-83139328 | None:intergenic | 40.0% |
| ! | AAGAATGAGGATTTGGTTCC+CGG | - | chr6_4:83139371-83139390 | Msa1000310:CDS | 40.0% |
| !! | TGTTGATTTCGGAGCTTTCA+TGG | - | chr6_4:83139442-83139461 | Msa1000310:CDS | 40.0% |
| GTCTCTTGGACAAGAAGTTA+CGG | - | chr6_4:83139526-83139545 | Msa1000310:CDS | 40.0% | |
| ATGCGTGAAAACACTGATAC+TGG | - | chr6_4:83139596-83139615 | Msa1000310:intron | 40.0% | |
| CCAAACAATGCAGAGAAATC+CGG | - | chr6_4:83139635-83139654 | Msa1000310:intron | 40.0% | |
| GAGGAGGGATTCTTCAAAAT+CGG | - | chr6_4:83139664-83139683 | Msa1000310:CDS | 40.0% | |
| AGGAGGGATTCTTCAAAATC+GGG | - | chr6_4:83139665-83139684 | Msa1000310:CDS | 40.0% | |
| ATTCTTCAAAATCGGGTCCA+AGG | - | chr6_4:83139672-83139691 | Msa1000310:CDS | 40.0% | |
| !! | CACGAAATTTGTTGTAGGTC+AGG | - | chr6_4:83139709-83139728 | Msa1000310:CDS | 40.0% |
| TATATCACTTCCTGAAGGAG+AGG | - | chr6_4:83139775-83139794 | Msa1000310:CDS | 40.0% | |
| ! | CGAGTTTTGCGTATCACAAT+AGG | - | chr6_4:83139820-83139839 | Msa1000310:CDS | 40.0% |
| ! | ACGTTGACTATGAAGAAGGA+AGG | - | chr6_4:83139850-83139869 | Msa1000310:CDS | 40.0% |
| ATCATCAACTACAGAGACTG+TGG | - | chr6_4:83140011-83140030 | Msa1000310:CDS | 40.0% | |
| AGTGGCTGATCAAATTGTTG+CGG | - | chr6_4:83140287-83140306 | Msa1000310:CDS | 40.0% | |
| AACTGCATCACTATCTTCCT+CGG | + | chr6_4:83140367-83140386 | None:intergenic | 40.0% | |
| CTCCATATCAGCCACAGAAA+CGG | - | chr6_4:83139178-83139197 | Msa1000310:CDS | 45.0% | |
| TTCCGTTTCTGTGGCTGATA+TGG | + | chr6_4:83139183-83139202 | None:intergenic | 45.0% | |
| GACAGATACTTCCGTTTCTG+TGG | + | chr6_4:83139192-83139211 | None:intergenic | 45.0% | |
| !! | AGAAACGGAAGTATCTGTCG+AGG | - | chr6_4:83139193-83139212 | Msa1000310:CDS | 45.0% |
| !! | TGTAGAACCAGCATTGGCAT+CGG | + | chr6_4:83139303-83139322 | None:intergenic | 45.0% |
| GATGCCTCCTGTAAAGAATG+AGG | - | chr6_4:83139358-83139377 | Msa1000310:CDS | 45.0% | |
| ! | AGAATGAGGATTTGGTTCCC+GGG | - | chr6_4:83139372-83139391 | Msa1000310:CDS | 45.0% |
| GATTTCGGAGCTTTCATGGA+CGG | - | chr6_4:83139446-83139465 | Msa1000310:CDS | 45.0% | |
| ! | GTCTCAAGTGTTGTGTCTCT+TGG | - | chr6_4:83139512-83139531 | Msa1000310:CDS | 45.0% |
| TGGACAAGAAGTTACGGTGA+AGG | - | chr6_4:83139532-83139551 | Msa1000310:CDS | 45.0% | |
| CCGGATTTCTCTGCATTGTT+TGG | + | chr6_4:83139638-83139657 | None:intergenic | 45.0% | |
| GTACGGTGAAGAATATGACG+AGG | - | chr6_4:83139741-83139760 | Msa1000310:CDS | 45.0% | |
| AGAAATCCTTCCTCTCCTTC+AGG | + | chr6_4:83139788-83139807 | None:intergenic | 45.0% | |
| ACGCAAAACTCGTACGCTAA+TGG | + | chr6_4:83139812-83139831 | None:intergenic | 45.0% | |
| ! | AGCGACGTTGACTATGAAGA+AGG | - | chr6_4:83139846-83139865 | Msa1000310:CDS | 45.0% |
| AGCTGCTGCAGAATTGGAAA+AGG | - | chr6_4:83139873-83139892 | Msa1000310:CDS | 45.0% | |
| !! | GAAAAGGCACTTGCACAAGT+GGG | - | chr6_4:83139889-83139908 | Msa1000310:CDS | 45.0% |
| AGAGACTGTGGAAGATTCAC+TGG | - | chr6_4:83140023-83140042 | Msa1000310:CDS | 45.0% | |
| !! | TATAAATGGTGCCGCTGAGA+AGG | - | chr6_4:83140098-83140117 | Msa1000310:CDS | 45.0% |
| ! | CAATGTCGAAACTGACTCAC+CGG | - | chr6_4:83140218-83140237 | Msa1000310:CDS | 45.0% |
| CTTTCATCAGCCACTTCAAC+CGG | + | chr6_4:83140240-83140259 | None:intergenic | 45.0% | |
| ! | AACTGACTCACTGGTTGAAG+TGG | - | chr6_4:83140269-83140288 | Msa1000310:CDS | 45.0% |
| AGAATTTGTAGCTGCAACCG+AGG | - | chr6_4:83140347-83140366 | Msa1000310:CDS | 45.0% | |
| CTCCATATCAGCCACAGAAA+CGG | - | chr6_4:83139178-83139197 | Msa1000310:CDS | 45.0% | |
| TTCCGTTTCTGTGGCTGATA+TGG | + | chr6_4:83139183-83139202 | None:intergenic | 45.0% | |
| GACAGATACTTCCGTTTCTG+TGG | + | chr6_4:83139192-83139211 | None:intergenic | 45.0% | |
| !! | AGAAACGGAAGTATCTGTCG+AGG | - | chr6_4:83139193-83139212 | Msa1000310:CDS | 45.0% |
| !! | TGTAGAACCAGCATTGGCAT+CGG | + | chr6_4:83139303-83139322 | None:intergenic | 45.0% |
| GATGCCTCCTGTAAAGAATG+AGG | - | chr6_4:83139358-83139377 | Msa1000310:CDS | 45.0% | |
| ! | AGAATGAGGATTTGGTTCCC+GGG | - | chr6_4:83139372-83139391 | Msa1000310:CDS | 45.0% |
| GATTTCGGAGCTTTCATGGA+CGG | - | chr6_4:83139446-83139465 | Msa1000310:CDS | 45.0% | |
| ! | GTCTCAAGTGTTGTGTCTCT+TGG | - | chr6_4:83139512-83139531 | Msa1000310:CDS | 45.0% |
| TGGACAAGAAGTTACGGTGA+AGG | - | chr6_4:83139532-83139551 | Msa1000310:CDS | 45.0% | |
| CCGGATTTCTCTGCATTGTT+TGG | + | chr6_4:83139638-83139657 | None:intergenic | 45.0% | |
| GTACGGTGAAGAATATGACG+AGG | - | chr6_4:83139741-83139760 | Msa1000310:CDS | 45.0% | |
| AGAAATCCTTCCTCTCCTTC+AGG | + | chr6_4:83139788-83139807 | None:intergenic | 45.0% | |
| ACGCAAAACTCGTACGCTAA+TGG | + | chr6_4:83139812-83139831 | None:intergenic | 45.0% | |
| ! | AGCGACGTTGACTATGAAGA+AGG | - | chr6_4:83139846-83139865 | Msa1000310:CDS | 45.0% |
| AGCTGCTGCAGAATTGGAAA+AGG | - | chr6_4:83139873-83139892 | Msa1000310:CDS | 45.0% | |
| !! | GAAAAGGCACTTGCACAAGT+GGG | - | chr6_4:83139889-83139908 | Msa1000310:CDS | 45.0% |
| AGAGACTGTGGAAGATTCAC+TGG | - | chr6_4:83140023-83140042 | Msa1000310:CDS | 45.0% | |
| !! | TATAAATGGTGCCGCTGAGA+AGG | - | chr6_4:83140098-83140117 | Msa1000310:CDS | 45.0% |
| ! | CAATGTCGAAACTGACTCAC+CGG | - | chr6_4:83140218-83140237 | Msa1000310:CDS | 45.0% |
| CTTTCATCAGCCACTTCAAC+CGG | + | chr6_4:83140240-83140259 | None:intergenic | 45.0% | |
| ! | AACTGACTCACTGGTTGAAG+TGG | - | chr6_4:83140269-83140288 | Msa1000310:CDS | 45.0% |
| AGAATTTGTAGCTGCAACCG+AGG | - | chr6_4:83140347-83140366 | Msa1000310:CDS | 45.0% | |
| CGTTTCTGTGGCTGATATGG+AGG | + | chr6_4:83139180-83139199 | None:intergenic | 50.0% | |
| CCTTGCAGGTCTTGAACGTT+TGG | + | chr6_4:83139330-83139349 | None:intergenic | 50.0% | |
| CCAAACGTTCAAGACCTGCA+AGG | - | chr6_4:83139327-83139346 | Msa1000310:CDS | 50.0% | |
| ! | GAATGAGGATTTGGTTCCCG+GGG | - | chr6_4:83139373-83139392 | Msa1000310:CDS | 50.0% |
| CAACAAACGCACCAAACGGT+TGG | + | chr6_4:83139427-83139446 | None:intergenic | 50.0% | |
| AATGCAGAGAAATCCGGCTC+TGG | - | chr6_4:83139641-83139660 | Msa1000310:intron | 50.0% | |
| ATGCAGAGAAATCCGGCTCT+GGG | - | chr6_4:83139642-83139661 | Msa1000310:intron | 50.0% | |
| TGTTGTAGGTCAGGAGTTGC+AGG | - | chr6_4:83139718-83139737 | Msa1000310:CDS | 50.0% | |
| GTTGTAGGTCAGGAGTTGCA+GGG | - | chr6_4:83139719-83139738 | Msa1000310:CDS | 50.0% | |
| TCACTTCCTGAAGGAGAGGA+AGG | - | chr6_4:83139779-83139798 | Msa1000310:CDS | 50.0% | |
| !! | GGAAAAGGCACTTGCACAAG+TGG | - | chr6_4:83139888-83139907 | Msa1000310:CDS | 50.0% |
| GACGCTGAAAGCAACCAAGA+AGG | - | chr6_4:83140069-83140088 | Msa1000310:CDS | 50.0% | |
| AGAGGCGGTTGCTGAAAGTT+TGG | - | chr6_4:83140125-83140144 | Msa1000310:CDS | 50.0% | |
| ! | AACTGACTCACCGGTTGAAG+TGG | - | chr6_4:83140227-83140246 | Msa1000310:CDS | 50.0% |
| GATAGTGATGCAGTTGAGCC+TGG | - | chr6_4:83140372-83140391 | Msa1000310:CDS | 50.0% | |
| GATTCTGTAACAACAGGGCC+AGG | + | chr6_4:83140393-83140412 | None:intergenic | 50.0% | |
| CGTTTCTGTGGCTGATATGG+AGG | + | chr6_4:83139180-83139199 | None:intergenic | 50.0% | |
| CCTTGCAGGTCTTGAACGTT+TGG | + | chr6_4:83139330-83139349 | None:intergenic | 50.0% | |
| CCAAACGTTCAAGACCTGCA+AGG | - | chr6_4:83139327-83139346 | Msa1000310:CDS | 50.0% | |
| ! | GAATGAGGATTTGGTTCCCG+GGG | - | chr6_4:83139373-83139392 | Msa1000310:CDS | 50.0% |
| CAACAAACGCACCAAACGGT+TGG | + | chr6_4:83139427-83139446 | None:intergenic | 50.0% | |
| AATGCAGAGAAATCCGGCTC+TGG | - | chr6_4:83139641-83139660 | Msa1000310:intron | 50.0% | |
| ATGCAGAGAAATCCGGCTCT+GGG | - | chr6_4:83139642-83139661 | Msa1000310:intron | 50.0% | |
| TGTTGTAGGTCAGGAGTTGC+AGG | - | chr6_4:83139718-83139737 | Msa1000310:CDS | 50.0% | |
| GTTGTAGGTCAGGAGTTGCA+GGG | - | chr6_4:83139719-83139738 | Msa1000310:CDS | 50.0% | |
| TCACTTCCTGAAGGAGAGGA+AGG | - | chr6_4:83139779-83139798 | Msa1000310:CDS | 50.0% | |
| !! | GGAAAAGGCACTTGCACAAG+TGG | - | chr6_4:83139888-83139907 | Msa1000310:CDS | 50.0% |
| GACGCTGAAAGCAACCAAGA+AGG | - | chr6_4:83140069-83140088 | Msa1000310:CDS | 50.0% | |
| AGAGGCGGTTGCTGAAAGTT+TGG | - | chr6_4:83140125-83140144 | Msa1000310:CDS | 50.0% | |
| ! | AACTGACTCACCGGTTGAAG+TGG | - | chr6_4:83140227-83140246 | Msa1000310:CDS | 50.0% |
| GATAGTGATGCAGTTGAGCC+TGG | - | chr6_4:83140372-83140391 | Msa1000310:CDS | 50.0% | |
| GATTCTGTAACAACAGGGCC+AGG | + | chr6_4:83140393-83140412 | None:intergenic | 50.0% | |
| !! | CCAGCATTGGCATCGGACTT+AGG | + | chr6_4:83139296-83139315 | None:intergenic | 55.0% |
| CCTAAGTCCGATGCCAATGC+TGG | - | chr6_4:83139293-83139312 | Msa1000310:CDS | 55.0% | |
| !! | GGCATCTCGCTTTTCCTTGC+AGG | + | chr6_4:83139344-83139363 | None:intergenic | 55.0% |
| TTTCCCCGTAAAAGCTGCCC+CGG | + | chr6_4:83139393-83139412 | None:intergenic | 55.0% | |
| AGGTCAGGAGTTGCAGGGTA+CGG | - | chr6_4:83139724-83139743 | Msa1000310:CDS | 55.0% | |
| GGAAGGAGCTGCTGCAGAAT+TGG | - | chr6_4:83139867-83139886 | Msa1000310:CDS | 55.0% | |
| CGATTCCTCGACAGCTGTTG+TGG | - | chr6_4:83140047-83140066 | Msa1000310:CDS | 55.0% | |
| TGCCGCTGAGAAGGAAACAG+AGG | - | chr6_4:83140107-83140126 | Msa1000310:CDS | 55.0% | |
| CGCCTCTGTTTCCTTCTCAG+CGG | + | chr6_4:83140112-83140131 | None:intergenic | 55.0% | |
| CGCTGAGAAGGAAACAGAGG+CGG | - | chr6_4:83140110-83140129 | Msa1000310:CDS | 55.0% | |
| !! | CCAGCATTGGCATCGGACTT+AGG | + | chr6_4:83139296-83139315 | None:intergenic | 55.0% |
| CCTAAGTCCGATGCCAATGC+TGG | - | chr6_4:83139293-83139312 | Msa1000310:CDS | 55.0% | |
| !! | GGCATCTCGCTTTTCCTTGC+AGG | + | chr6_4:83139344-83139363 | None:intergenic | 55.0% |
| TTTCCCCGTAAAAGCTGCCC+CGG | + | chr6_4:83139393-83139412 | None:intergenic | 55.0% | |
| AGGTCAGGAGTTGCAGGGTA+CGG | - | chr6_4:83139724-83139743 | Msa1000310:CDS | 55.0% | |
| GGAAGGAGCTGCTGCAGAAT+TGG | - | chr6_4:83139867-83139886 | Msa1000310:CDS | 55.0% | |
| CGATTCCTCGACAGCTGTTG+TGG | - | chr6_4:83140047-83140066 | Msa1000310:CDS | 55.0% | |
| TGCCGCTGAGAAGGAAACAG+AGG | - | chr6_4:83140107-83140126 | Msa1000310:CDS | 55.0% | |
| CGCCTCTGTTTCCTTCTCAG+CGG | + | chr6_4:83140112-83140131 | None:intergenic | 55.0% | |
| CGCTGAGAAGGAAACAGAGG+CGG | - | chr6_4:83140110-83140129 | Msa1000310:CDS | 55.0% | |
| ! | GGTTCCCGGGGCAGCTTTTA+CGG | - | chr6_4:83139385-83139404 | Msa1000310:CDS | 60.0% |
| ! | GTTCCCGGGGCAGCTTTTAC+GGG | - | chr6_4:83139386-83139405 | Msa1000310:CDS | 60.0% |
| ! | TTCCCGGGGCAGCTTTTACG+GGG | - | chr6_4:83139387-83139406 | Msa1000310:CDS | 60.0% |
| TTCCCCGTAAAAGCTGCCCC+GGG | + | chr6_4:83139392-83139411 | None:intergenic | 60.0% | |
| !! | CAGAGAAATCCGGCTCTGGG+AGG | - | chr6_4:83139645-83139664 | Msa1000310:intron | 60.0% |
| !! | AGAAATCCGGCTCTGGGAGG+AGG | - | chr6_4:83139648-83139667 | Msa1000310:intron | 60.0% |
| !! | GAAATCCGGCTCTGGGAGGA+GGG | - | chr6_4:83139649-83139668 | Msa1000310:intron | 60.0% |
| AGAATCCCTCCTCCCAGAGC+CGG | + | chr6_4:83139657-83139676 | None:intergenic | 60.0% | |
| AGCGTCCACAACAGCTGTCG+AGG | + | chr6_4:83140055-83140074 | None:intergenic | 60.0% | |
| ! | GGTTCCCGGGGCAGCTTTTA+CGG | - | chr6_4:83139385-83139404 | Msa1000310:CDS | 60.0% |
| ! | GTTCCCGGGGCAGCTTTTAC+GGG | - | chr6_4:83139386-83139405 | Msa1000310:CDS | 60.0% |
| ! | TTCCCGGGGCAGCTTTTACG+GGG | - | chr6_4:83139387-83139406 | Msa1000310:CDS | 60.0% |
| TTCCCCGTAAAAGCTGCCCC+GGG | + | chr6_4:83139392-83139411 | None:intergenic | 60.0% | |
| !! | CAGAGAAATCCGGCTCTGGG+AGG | - | chr6_4:83139645-83139664 | Msa1000310:intron | 60.0% |
| !! | AGAAATCCGGCTCTGGGAGG+AGG | - | chr6_4:83139648-83139667 | Msa1000310:intron | 60.0% |
| !! | GAAATCCGGCTCTGGGAGGA+GGG | - | chr6_4:83139649-83139668 | Msa1000310:intron | 60.0% |
| AGAATCCCTCCTCCCAGAGC+CGG | + | chr6_4:83139657-83139676 | None:intergenic | 60.0% | |
| AGCGTCCACAACAGCTGTCG+AGG | + | chr6_4:83140055-83140074 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6_4 | gene | 83138960 | 83140437 | 83138960 | ID=Msa1000310;Name=Msa1000310 |
| chr6_4 | mRNA | 83138960 | 83140437 | 83138960 | ID=Msa1000310-mRNA-1;Parent=Msa1000310;Name=Msa1000310-mRNA-1;_AED=0.45;_eAED=0.45;_QI=0|0|0|1|1|1|2|0|458 |
| chr6_4 | exon | 83139657 | 83140437 | 83139657 | ID=Msa1000310-mRNA-1:exon:16064;Parent=Msa1000310-mRNA-1 |
| chr6_4 | exon | 83138960 | 83139555 | 83138960 | ID=Msa1000310-mRNA-1:exon:16063;Parent=Msa1000310-mRNA-1 |
| chr6_4 | CDS | 83139657 | 83140437 | 83139657 | ID=Msa1000310-mRNA-1:cds;Parent=Msa1000310-mRNA-1 |
| chr6_4 | CDS | 83138960 | 83139555 | 83138960 | ID=Msa1000310-mRNA-1:cds;Parent=Msa1000310-mRNA-1 |
| Gene Sequence |
| Protein sequence |
