AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0797220


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0797220 MtrunA17_Chr5g0400451 95.789 475 19 1 1 475 1 474 0.0 892
Msa0797220 MtrunA17_Chr8g0343421 25.559 313 201 9 172 470 243 537 9.55e-19 89.0
Msa0797220 MtrunA17_Chr7g0229961 25.240 313 202 9 172 470 244 538 2.01e-18 88.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0797220 AT1G32500.1 58.244 467 184 5 13 470 11 475 0.0 538
Msa0797220 AT4G04770.1 26.599 297 193 7 172 455 254 538 1.05e-20 95.5

Find 137 sgRNAs with CRISPR-Local

Find 260 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GGATTGGGGCGGGGAGGATT+TGG 0.223915 5_3:+9301526 None:intergenic
AAGTCAGATTAAAAGTTTAT+TGG 0.227386 5_3:-9298827 Msa0797220:CDS
TGGACGGTGGAGATTTATTT+TGG 0.233451 5_3:-9301326 Msa0797220:CDS
TGGTGGTGGTGGTTGGGATT+GGG 0.235303 5_3:+9301511 None:intergenic
GTGGTGGTGGTGGTTGGGAT+TGG 0.236284 5_3:+9301510 None:intergenic
GGAATGAGAATGAGTGTTAT+TGG 0.268873 5_3:-9301104 Msa0797220:CDS
GATTGGGGCGGGGAGGATTT+GGG 0.272960 5_3:+9301527 None:intergenic
TCTATCTCTAATGGAAGAAT+TGG 0.279363 5_3:+9298855 None:intergenic
GGTGGTGGTGGTTGGGATTG+GGG 0.279949 5_3:+9301512 None:intergenic
GGTTGAAACTCCGGTTCATT+TGG 0.287277 5_3:-9301244 Msa0797220:CDS
GCCTCAATTGTTACAATTGC+CGG 0.290023 5_3:+9298658 None:intergenic
TGTTATTGCTAAGAGGGTTT+TGG 0.313556 5_3:-9301364 Msa0797220:CDS
ACAGAAGTTGGCTTTGTTCC+AGG 0.315039 5_3:+9298962 None:intergenic
TTGGTGGTGGTGGAGAAAGG+TGG 0.325889 5_3:-9301156 Msa0797220:CDS
TCAGCAATGATTTGGAGATT+TGG 0.333268 5_3:+9299021 None:intergenic
GTGGTGGTTGGGATTGGGGC+GGG 0.338823 5_3:+9301516 None:intergenic
AGCTTGATAAAAGTATAAAT+TGG 0.339576 5_3:-9298746 Msa0797220:three_prime_UTR
GTTGAATGTGACTCTGGTTT+TGG 0.342738 5_3:+9301737 None:intergenic
AGAAGAAGATGATGGGATTA+TGG 0.348829 5_3:+9301791 None:intergenic
ACGGAAACGTCAAGGTTAAC+AGG 0.350131 5_3:-9299820 Msa0797220:intron
TGGTGGTGGTGGAGAAAGGT+GGG 0.355445 5_3:-9301155 Msa0797220:CDS
ACCTACAATTGTGATCATTT+AGG 0.356993 5_3:+9298796 None:intergenic
TGACGTCATCAGCAATGATT+TGG 0.358930 5_3:+9299013 None:intergenic
TTATGTACCGGAGGGTGTTC+GGG 0.363167 5_3:-9301265 Msa0797220:CDS
ACGTGGCAGGGGAATTGATC+GGG 0.365093 5_3:+9301480 None:intergenic
TTTATGTACCGGAGGGTGTT+CGG 0.366842 5_3:-9301266 Msa0797220:CDS
TATATCGAATCCGAGGGTTT+TGG 0.370433 5_3:-9301175 Msa0797220:CDS
GTAAGCACAGGAGGCAAACT+TGG 0.373309 5_3:-9300028 Msa0797220:CDS
TTTGGGTTATGTATCATTGC+AGG 0.373402 5_3:-9301226 Msa0797220:CDS
TTATTGGAGTAATGCTGTTT+TGG 0.374251 5_3:-9301088 Msa0797220:CDS
GTTGAAACTCCGGTTCATTT+GGG 0.376460 5_3:-9301243 Msa0797220:CDS
ACTTCGTACTCTATCTCTAA+TGG 0.380409 5_3:+9298846 None:intergenic
TGGTGGTTGGGATTGGGGCG+GGG 0.391272 5_3:+9301517 None:intergenic
TTGGAGGTTGTGATTGGGGA+AGG 0.394788 5_3:-9301069 Msa0797220:CDS
ACAATCAACTTCAAAATTCT+CGG 0.395737 5_3:-9301433 Msa0797220:CDS
TTGATTCAGAAACAGCTAGA+AGG 0.399795 5_3:-9298921 Msa0797220:CDS
TCTTCACAGTAGTCTTGTAT+TGG 0.400205 5_3:-9299915 Msa0797220:CDS
GATATAGTTGAGGAGTTTGA+AGG 0.406381 5_3:-9301126 Msa0797220:CDS
TTTGGAATTGGTATCTGGAT+TGG 0.420346 5_3:-9301346 Msa0797220:CDS
TCCTAAATGATCACAATTGT+AGG 0.421889 5_3:-9298797 Msa0797220:exon
TGTAGGGACGGAGTCTTCTA+AGG 0.425260 5_3:+9301665 None:intergenic
CAAATGGACTTCTGTTCGTC+AGG 0.432884 5_3:-9300992 Msa0797220:intron
TGTATCATTGCAGGGTAGTA+AGG 0.434434 5_3:-9301217 Msa0797220:CDS
ACATAAACCACCGTCAAATC+CGG 0.439129 5_3:+9301282 None:intergenic
TGGTTGGGATTGGGGCGGGG+AGG 0.441570 5_3:+9301520 None:intergenic
TGTGATTGGGGAAGGTGGTA+AGG 0.448558 5_3:-9301061 Msa0797220:CDS
GGTGGTGGTGGAGAAAGGTG+GGG 0.452015 5_3:-9301154 Msa0797220:CDS
TCAGCGAGGTCGAGAATGAA+TGG 0.453976 5_3:+9301690 None:intergenic
GGTGGTGGTTGGGATTGGGG+CGG 0.456675 5_3:+9301515 None:intergenic
GATAACTCTGTCACTGTGTC+CGG 0.460261 5_3:+9299974 None:intergenic
GATTTGGGATGAGCGGAGGA+AGG 0.467041 5_3:+9301542 None:intergenic
TGAATGGTGTTATTGCTAAG+AGG 0.467060 5_3:-9301371 Msa0797220:CDS
GGTAATTTGTCAAAATTGAA+TGG 0.468521 5_3:-9301387 Msa0797220:CDS
TGCTTGCCGCGCATATCAAA+TGG 0.468727 5_3:-9301008 Msa0797220:CDS
CGGGGAGGATTTGGGATGAG+CGG 0.472875 5_3:+9301535 None:intergenic
GTCAACGATGCTGACGTGGC+AGG 0.472987 5_3:+9301467 None:intergenic
GTGCATTGTGGCTCATTCAC+AGG 0.474620 5_3:-9299858 Msa0797220:CDS
GGTGGTGGAGAAAGGTGGGG+AGG 0.477219 5_3:-9301151 Msa0797220:CDS
TATGCTCAGCAGACAGATGC+TGG 0.480588 5_3:-9299096 Msa0797220:CDS
GAATGGTGTTATTGCTAAGA+GGG 0.481175 5_3:-9301370 Msa0797220:CDS
CTATCTCTAATGGAAGAATT+GGG 0.482001 5_3:+9298856 None:intergenic
GATACATAACCCAAATGAAC+CGG 0.482489 5_3:+9301234 None:intergenic
CTGAATCAATGCCACGTGCT+TGG 0.483064 5_3:+9298935 None:intergenic
GATGATGAAGAAGAAGATGA+TGG 0.495014 5_3:+9301783 None:intergenic
TTGCACGAGGTTCAAGAAGA+AGG 0.497992 5_3:+9299058 None:intergenic
GGGTGTTCGGGTTGAAACTC+CGG 0.498504 5_3:-9301253 Msa0797220:CDS
TCAACGATGCTGACGTGGCA+GGG 0.499449 5_3:+9301468 None:intergenic
GAGGTTGTGATTGGGGAAGG+TGG 0.502507 5_3:-9301066 Msa0797220:CDS
AATCTCTTCTCTCTTCTCCA+TGG 0.503098 5_3:-9301605 Msa0797220:CDS
AATGGGTGCACCGGATTTGA+CGG 0.505675 5_3:-9301292 Msa0797220:CDS
CGAAGACTGTGGAGAGGTTG+TGG 0.506329 5_3:+9301642 None:intergenic
TGCCACGTCAGCATCGTTGA+CGG 0.508578 5_3:-9301465 Msa0797220:CDS
AATTGTGATCATTTAGGAGA+TGG 0.509008 5_3:+9298802 None:intergenic
GGTCACTTATTGCAGCTCCA+TGG 0.511189 5_3:+9298983 None:intergenic
TCATATCAAACAACTAGGTC+CGG 0.512491 5_3:-9299993 Msa0797220:CDS
GTCACTTATTGCAGCTCCAT+GGG 0.518219 5_3:+9298984 None:intergenic
TGCGTTGTTGAATGTGACTC+TGG 0.519290 5_3:+9301731 None:intergenic
TCCGGCAATTGTAACAATTG+AGG 0.522631 5_3:-9298659 Msa0797220:three_prime_UTR
CAACTAGAAGTGCATGGTGA+TGG 0.532423 5_3:+9298630 None:intergenic
TCCACCACCACCAAAACCCT+CGG 0.533080 5_3:+9301165 None:intergenic
GACGTGGCAGGGGAATTGAT+CGG 0.533599 5_3:+9301479 None:intergenic
GTGCTTGGAAATACAGAAGT+TGG 0.533653 5_3:+9298950 None:intergenic
TTTGACGGTGGTTTATGTAC+CGG 0.541831 5_3:-9301277 Msa0797220:CDS
CTGTGGAGAGGTTGTGGTGT+AGG 0.543065 5_3:+9301648 None:intergenic
CAACGATGCTGACGTGGCAG+GGG 0.543308 5_3:+9301469 None:intergenic
TCAACTTTGCACTTGTCTGT+TGG 0.543785 5_3:-9299953 Msa0797220:CDS
ATCTATCACTTCCCCTCCAA+AGG 0.544296 5_3:+9298885 None:intergenic
GTCTTGTATTGGATCATCCA+AGG 0.548517 5_3:-9299904 Msa0797220:CDS
TGATTCAGAAACAGCTAGAA+GGG 0.550672 5_3:-9298920 Msa0797220:CDS
GGACTCGCAGTTGTGTATGT+AGG 0.554163 5_3:-9298552 Msa0797220:three_prime_UTR
GAGAGGTTGTGGTGTAGGGA+CGG 0.557143 5_3:+9301653 None:intergenic
TCTTGTATTGGATCATCCAA+GGG 0.561446 5_3:-9299903 Msa0797220:CDS
GTTTCAACCCGAACACCCTC+CGG 0.561770 5_3:+9301258 None:intergenic
TGTGGAGAGGTTGTGGTGTA+GGG 0.564194 5_3:+9301649 None:intergenic
GTGGCAGGGGAATTGATCGG+GGG 0.565438 5_3:+9301482 None:intergenic
GCACAGGAGGCAAACTTGGA+AGG 0.565571 5_3:-9300024 Msa0797220:CDS
TGGGGAGGTTGATATAGTTG+AGG 0.565891 5_3:-9301136 Msa0797220:CDS
ATCTGACGGGAATAACCCCT+TGG 0.566453 5_3:+9299887 None:intergenic
TGCATTGTGGCTCATTCACA+GGG 0.566881 5_3:-9299857 Msa0797220:CDS
TTGGGTTATGTATCATTGCA+GGG 0.567610 5_3:-9301225 Msa0797220:CDS
GGAGAAGTCGTTGAAGCGAA+AGG 0.568994 5_3:+9301563 None:intergenic
CAATGCACTTATGAATCTGA+CGG 0.571017 5_3:+9299873 None:intergenic
ATATAGTTGAGGAGTTTGAA+GGG 0.571311 5_3:-9301125 Msa0797220:CDS
CGTGGCAGGGGAATTGATCG+GGG 0.572596 5_3:+9301481 None:intergenic
GGAGGATTTGGGATGAGCGG+AGG 0.577123 5_3:+9301538 None:intergenic
ATGATGAAGAAGAAGATGAT+GGG 0.577329 5_3:+9301784 None:intergenic
GAGCTTACAGAAGTAAGCAC+AGG 0.578828 5_3:-9300040 Msa0797220:CDS
GAGAAGTCGTTGAAGCGAAA+GGG 0.582355 5_3:+9301564 None:intergenic
CAGCGAGGTCGAGAATGAAT+GGG 0.582930 5_3:+9301691 None:intergenic
AATGCACTTATGAATCTGAC+GGG 0.586814 5_3:+9299874 None:intergenic
ACAAAATGAAGTGTCTACTC+CGG 0.588350 5_3:-9298677 Msa0797220:three_prime_UTR
GAATTGGTATCTGGATTGGA+CGG 0.597060 5_3:-9301342 Msa0797220:CDS
TGGAGCTGCAATAAGTGACC+TGG 0.598264 5_3:-9298980 Msa0797220:CDS
GACGGTGGTTTATGTACCGG+AGG 0.598657 5_3:-9301274 Msa0797220:CDS
GATTAATGGAATGGGTGCAC+CGG 0.603821 5_3:-9301301 Msa0797220:CDS
TCATTGCAGGGTAGTAAGGA+AGG 0.604053 5_3:-9301213 Msa0797220:CDS
GACCGTCAACGATGCTGACG+TGG 0.604811 5_3:+9301463 None:intergenic
AGATGTATATATCGAATCCG+AGG 0.610367 5_3:-9301182 Msa0797220:CDS
CTTACAGAAGTAAGCACAGG+AGG 0.618684 5_3:-9300037 Msa0797220:CDS
AATCTTCATATCAAACAACT+AGG 0.623363 5_3:-9299998 Msa0797220:CDS
ATTATGGAGTTGAATGCTGC+GGG 0.626580 5_3:+9301807 None:intergenic
CTTCTGTATTTCCAAGCACG+TGG 0.628093 5_3:-9298946 Msa0797220:CDS
GATGACGTCAAGTGTTCCCA+TGG 0.629397 5_3:-9299000 Msa0797220:CDS
ACGGTGGTTTATGTACCGGA+GGG 0.631873 5_3:-9301273 Msa0797220:CDS
AAGAAGATTCTCGAAGACTG+TGG 0.639780 5_3:+9301631 None:intergenic
TAAATACAACTAGAAGTGCA+TGG 0.640373 5_3:+9298624 None:intergenic
GGGTGCACCGGATTTGACGG+TGG 0.641084 5_3:-9301289 Msa0797220:CDS
GTCTGTTGGTAATCAAACAC+AGG 0.643557 5_3:-9299939 Msa0797220:CDS
AGAAGTCCATTTGATATGCG+CGG 0.652340 5_3:+9301002 None:intergenic
GATGTATATATCGAATCCGA+GGG 0.668832 5_3:-9301181 Msa0797220:CDS
TCAGATTCATAAGTGCATTG+TGG 0.677608 5_3:-9299870 Msa0797220:CDS
GATTCTCGAAGACTGTGGAG+AGG 0.677831 5_3:+9301636 None:intergenic
CTTGTATTGGATCATCCAAG+GGG 0.694144 5_3:-9299902 Msa0797220:CDS
TTGGTATCTGGATTGGACGG+TGG 0.694952 5_3:-9301339 Msa0797220:CDS
TTAACATTTACAGTTGCACG+AGG 0.704403 5_3:+9299045 None:intergenic
GATTATGGAGTTGAATGCTG+CGG 0.713690 5_3:+9301806 None:intergenic
AGTCTTCTAAGGTTTCAGCG+AGG 0.795490 5_3:+9301676 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATAGTTGTTATAGATTATAA+AGG + chr5_3:9299952-9299971 None:intergenic 15.0%
!! TAAACATATATACAATTGTA+AGG + chr5_3:9300671-9300690 None:intergenic 15.0%
!! TACAATTGTATATATGTTTA+TGG - chr5_3:9300671-9300690 Msa0797220:intron 15.0%
!!! AAATTTTTATTTATTGAGCT+AGG - chr5_3:9301138-9301157 Msa0797220:CDS 15.0%
!!! AGTTGTATTTATGTATTTTT+TGG - chr5_3:9301725-9301744 Msa0797220:CDS 15.0%
!! GAGTATGAATTTATTGTTTA+TGG - chr5_3:9299506-9299525 Msa0797220:intron 20.0%
!! TTATTGTTTATGGAATGAAA+AGG - chr5_3:9299516-9299535 Msa0797220:intron 20.0%
!! TAGAAAAAATTTGACATGAT+TGG - chr5_3:9300232-9300251 Msa0797220:intron 20.0%
!! CTTACTAACAAAATTAACAT+TGG + chr5_3:9300807-9300826 None:intergenic 20.0%
!! AAGTCAGATTAAAAGTTTAT+TGG - chr5_3:9301510-9301529 Msa0797220:CDS 20.0%
!!! AGCTTGATAAAAGTATAAAT+TGG - chr5_3:9301591-9301610 Msa0797220:CDS 20.0%
!!! AAAAATATTGTTTCTTGTCA+TGG - chr5_3:9301621-9301640 Msa0797220:CDS 20.0%
!!! TTTTGGAAAATAAATTTGTC+AGG - chr5_3:9301742-9301761 Msa0797220:CDS 20.0%
!! GTGAGTAAAAAAACAATAAT+AGG - chr5_3:9301764-9301783 Msa0797220:CDS 20.0%
! ACAATCAACTTCAAAATTCT+CGG - chr5_3:9298904-9298923 Msa0797220:CDS 25.0%
!! GGTAATTTGTCAAAATTGAA+TGG - chr5_3:9298950-9298969 Msa0797220:CDS 25.0%
!!! GATTTATTTTGGTCGATTAA+TGG - chr5_3:9299022-9299041 Msa0797220:CDS 25.0%
! TTATGTTGGAATAGTAAAAC+TGG - chr5_3:9299539-9299558 Msa0797220:intron 25.0%
! TATGTTGGAATAGTAAAACT+GGG - chr5_3:9299540-9299559 Msa0797220:intron 25.0%
! AATAGTAAAACTGGGTATAA+AGG - chr5_3:9299548-9299567 Msa0797220:intron 25.0%
! TATGCAATTCTTAGTGTTAT+AGG - chr5_3:9299682-9299701 Msa0797220:intron 25.0%
!! GCAATTTATCTTTTAGTATC+TGG - chr5_3:9299868-9299887 Msa0797220:CDS 25.0%
! TTAGTGCAAAAATGTTCTTA+TGG - chr5_3:9300011-9300030 Msa0797220:CDS 25.0%
! TAATGGCTAACTATATACAA+AGG - chr5_3:9300051-9300070 Msa0797220:CDS 25.0%
!! GTTGTTTGTTACAAAACAAT+CGG + chr5_3:9300144-9300163 None:intergenic 25.0%
! AATCTTCATATCAAACAACT+AGG - chr5_3:9300339-9300358 Msa0797220:intron 25.0%
! AACAATACAAGAGTGAATTT+AGG - chr5_3:9300558-9300577 Msa0797220:intron 25.0%
! GTTAGAAACAAATCGAAAAT+TGG + chr5_3:9300584-9300603 None:intergenic 25.0%
! TTAGTAAGCATTAATTATGC+TGG - chr5_3:9300819-9300838 Msa0797220:intron 25.0%
! TAGTAAGCATTAATTATGCT+GGG - chr5_3:9300820-9300839 Msa0797220:intron 25.0%
!! TACAATAACAAGGGTATATA+AGG + chr5_3:9300916-9300935 None:intergenic 25.0%
! TTCCTACATAAATGACTAAA+AGG + chr5_3:9300954-9300973 None:intergenic 25.0%
! AAGTCATCAGATTATATTGT+GGG + chr5_3:9301089-9301108 None:intergenic 25.0%
! TAAGTCATCAGATTATATTG+TGG + chr5_3:9301090-9301109 None:intergenic 25.0%
! AGTGTATTACTGATATAAAG+TGG + chr5_3:9301208-9301227 None:intergenic 25.0%
!! GTAATACACTATTCTTGTTT+AGG - chr5_3:9301218-9301237 Msa0797220:CDS 25.0%
!! ACACTTCATTTTGTAGAAAT+TGG + chr5_3:9301654-9301673 None:intergenic 25.0%
ATGATGAAGAAGAAGATGAT+GGG + chr5_3:9298556-9298575 None:intergenic 30.0%
!! ATTTTGGTCGATTAATGGAA+TGG - chr5_3:9299027-9299046 Msa0797220:CDS 30.0%
! TTTTGGTCGATTAATGGAAT+GGG - chr5_3:9299028-9299047 Msa0797220:CDS 30.0%
ATATAGTTGAGGAGTTTGAA+GGG - chr5_3:9299212-9299231 Msa0797220:intron 30.0%
!! TTATTGGAGTAATGCTGTTT+TGG - chr5_3:9299249-9299268 Msa0797220:intron 30.0%
ATGGAATGAAAAGGTTATGT+TGG - chr5_3:9299525-9299544 Msa0797220:intron 30.0%
GTTATCAAAGAAGTAGTCAT+AGG + chr5_3:9299635-9299654 None:intergenic 30.0%
!! ACTACTTCTTTGATAACGAA+GGG - chr5_3:9299638-9299657 Msa0797220:intron 30.0%
GTGTTATAGGTATAATGTTG+CGG - chr5_3:9299695-9299714 Msa0797220:intron 30.0%
AAATTGCAAGTGATTCCATT+AGG + chr5_3:9299855-9299874 None:intergenic 30.0%
! ACTTTTGACGAAGAAGATAA+TGG - chr5_3:9300034-9300053 Msa0797220:CDS 30.0%
GCTAACTATATACAAAGGAA+GGG - chr5_3:9300056-9300075 Msa0797220:CDS 30.0%
CACACGAAATGCAAAAATAA+AGG + chr5_3:9300121-9300140 None:intergenic 30.0%
TGTGATTGTTGAACATTTAC+AGG - chr5_3:9300257-9300276 Msa0797220:intron 30.0%
TACAATTGTAAGGACATCTT+CGG + chr5_3:9300661-9300680 None:intergenic 30.0%
! ATAAGGTTTGTTTGATGGTT+GGG + chr5_3:9300899-9300918 None:intergenic 30.0%
! TATAAGGTTTGTTTGATGGT+TGG + chr5_3:9300900-9300919 None:intergenic 30.0%
! GGTATATAAGGTTTGTTTGA+TGG + chr5_3:9300904-9300923 None:intergenic 30.0%
GGATATACGTACAATAACAA+GGG + chr5_3:9300925-9300944 None:intergenic 30.0%
TGGATATACGTACAATAACA+AGG + chr5_3:9300926-9300945 None:intergenic 30.0%
TAAATGACTAAAAGGCAGTT+TGG + chr5_3:9300946-9300965 None:intergenic 30.0%
! TGCCTTTTAGTCATTTATGT+AGG - chr5_3:9300949-9300968 Msa0797220:intron 30.0%
! GTGCTTTTATGTATCAAGAA+TGG - chr5_3:9300975-9300994 Msa0797220:intron 30.0%
AGTCATCAGATTATATTGTG+GGG + chr5_3:9301088-9301107 None:intergenic 30.0%
TTTATTTATTGAGCTAGGAC+AGG - chr5_3:9301143-9301162 Msa0797220:CDS 30.0%
! TTCTAATTTTTGCCTTTGGA+GGG - chr5_3:9301440-9301459 Msa0797220:CDS 30.0%
CTATCTCTAATGGAAGAATT+GGG + chr5_3:9301484-9301503 None:intergenic 30.0%
TCTATCTCTAATGGAAGAAT+TGG + chr5_3:9301485-9301504 None:intergenic 30.0%
AATTGTGATCATTTAGGAGA+TGG + chr5_3:9301538-9301557 None:intergenic 30.0%
TCCTAAATGATCACAATTGT+AGG - chr5_3:9301540-9301559 Msa0797220:CDS 30.0%
ACCTACAATTGTGATCATTT+AGG + chr5_3:9301544-9301563 None:intergenic 30.0%
! TAAATACAACTAGAAGTGCA+TGG + chr5_3:9301716-9301735 None:intergenic 30.0%
!! AGAAGAAGATGATGGGATTA+TGG + chr5_3:9298549-9298568 None:intergenic 35.0%
GATGATGAAGAAGAAGATGA+TGG + chr5_3:9298557-9298576 None:intergenic 35.0%
! AAATTCTCGGAGTTTTCAGA+TGG - chr5_3:9298917-9298936 Msa0797220:CDS 35.0%
! AATTCTCGGAGTTTTCAGAT+GGG - chr5_3:9298918-9298937 Msa0797220:CDS 35.0%
!! TGAATGGTGTTATTGCTAAG+AGG - chr5_3:9298966-9298985 Msa0797220:CDS 35.0%
!! GAATGGTGTTATTGCTAAGA+GGG - chr5_3:9298967-9298986 Msa0797220:CDS 35.0%
! TGTTATTGCTAAGAGGGTTT+TGG - chr5_3:9298973-9298992 Msa0797220:CDS 35.0%
! TTTGGAATTGGTATCTGGAT+TGG - chr5_3:9298991-9299010 Msa0797220:CDS 35.0%
GATACATAACCCAAATGAAC+CGG + chr5_3:9299106-9299125 None:intergenic 35.0%
! TTTGGGTTATGTATCATTGC+AGG - chr5_3:9299111-9299130 Msa0797220:intron 35.0%
TTGGGTTATGTATCATTGCA+GGG - chr5_3:9299112-9299131 Msa0797220:intron 35.0%
AGATGTATATATCGAATCCG+AGG - chr5_3:9299155-9299174 Msa0797220:intron 35.0%
GATGTATATATCGAATCCGA+GGG - chr5_3:9299156-9299175 Msa0797220:intron 35.0%
GATATAGTTGAGGAGTTTGA+AGG - chr5_3:9299211-9299230 Msa0797220:intron 35.0%
GGAATGAGAATGAGTGTTAT+TGG - chr5_3:9299233-9299252 Msa0797220:intron 35.0%
!! GACTACTTCTTTGATAACGA+AGG - chr5_3:9299637-9299656 Msa0797220:intron 35.0%
!! CTACTTCTTTGATAACGAAG+GGG - chr5_3:9299639-9299658 Msa0797220:intron 35.0%
TTAGTATCTGGTAGAAGTAG+TGG - chr5_3:9299880-9299899 Msa0797220:CDS 35.0%
! AGTGGCATCATTTTGTCATT+AGG - chr5_3:9299898-9299917 Msa0797220:CDS 35.0%
GGCTAACTATATACAAAGGA+AGG - chr5_3:9300055-9300074 Msa0797220:CDS 35.0%
!! TTTTTGAGAAGTTACGCAAG+AGG - chr5_3:9300202-9300221 Msa0797220:intron 35.0%
!! TTTTGAGAAGTTACGCAAGA+GGG - chr5_3:9300203-9300222 Msa0797220:intron 35.0%
TCATATCAAACAACTAGGTC+CGG - chr5_3:9300344-9300363 Msa0797220:intron 35.0%
!! TCTTCACAGTAGTCTTGTAT+TGG - chr5_3:9300422-9300441 Msa0797220:intron 35.0%
TCTTGTATTGGATCATCCAA+GGG - chr5_3:9300434-9300453 Msa0797220:intron 35.0%
AATGCACTTATGAATCTGAC+GGG + chr5_3:9300466-9300485 None:intergenic 35.0%
CAATGCACTTATGAATCTGA+CGG + chr5_3:9300467-9300486 None:intergenic 35.0%
TCAGATTCATAAGTGCATTG+TGG - chr5_3:9300467-9300486 Msa0797220:intron 35.0%
CATCTTCGGTTCTTCATAAA+TGG + chr5_3:9300647-9300666 None:intergenic 35.0%
TAATTTCACCTGTCTTGCTA+TGG - chr5_3:9300739-9300758 Msa0797220:intron 35.0%
! TAAGGTTTGTTTGATGGTTG+GGG + chr5_3:9300898-9300917 None:intergenic 35.0%
TTAACATTTACAGTTGCACG+AGG + chr5_3:9301295-9301314 None:intergenic 35.0%
! TCAGCAATGATTTGGAGATT+TGG + chr5_3:9301319-9301338 None:intergenic 35.0%
TTGATTCAGAAACAGCTAGA+AGG - chr5_3:9301416-9301435 Msa0797220:CDS 35.0%
TGATTCAGAAACAGCTAGAA+GGG - chr5_3:9301417-9301436 Msa0797220:CDS 35.0%
!! AGGGTTCTAATTTTTGCCTT+TGG - chr5_3:9301436-9301455 Msa0797220:CDS 35.0%
! GTTCTAATTTTTGCCTTTGG+AGG - chr5_3:9301439-9301458 Msa0797220:CDS 35.0%
!! TCTAATTTTTGCCTTTGGAG+GGG - chr5_3:9301441-9301460 Msa0797220:CDS 35.0%
ACTTCGTACTCTATCTCTAA+TGG + chr5_3:9301494-9301513 None:intergenic 35.0%
! ACAAAATGAAGTGTCTACTC+CGG - chr5_3:9301660-9301679 Msa0797220:CDS 35.0%
ATTATGGAGTTGAATGCTGC+GGG + chr5_3:9298533-9298552 None:intergenic 40.0%
GATTATGGAGTTGAATGCTG+CGG + chr5_3:9298534-9298553 None:intergenic 40.0%
!! GTTGAATGTGACTCTGGTTT+TGG + chr5_3:9298603-9298622 None:intergenic 40.0%
AAGAAGATTCTCGAAGACTG+TGG + chr5_3:9298709-9298728 None:intergenic 40.0%
AATCTCTTCTCTCTTCTCCA+TGG - chr5_3:9298732-9298751 Msa0797220:three_prime_UTR 40.0%
! ATTCTCGGAGTTTTCAGATG+GGG - chr5_3:9298919-9298938 Msa0797220:CDS 40.0%
! TTTTCAGATGGGGTTTACGT+TGG - chr5_3:9298929-9298948 Msa0797220:CDS 40.0%
!!! TGCTAAGAGGGTTTTGGAAT+TGG - chr5_3:9298979-9298998 Msa0797220:CDS 40.0%
!!! AGGGTTTTGGAATTGGTATC+TGG - chr5_3:9298986-9299005 Msa0797220:CDS 40.0%
! GAATTGGTATCTGGATTGGA+CGG - chr5_3:9298995-9299014 Msa0797220:CDS 40.0%
! TGGACGGTGGAGATTTATTT+TGG - chr5_3:9299011-9299030 Msa0797220:CDS 40.0%
ACATAAACCACCGTCAAATC+CGG + chr5_3:9299058-9299077 None:intergenic 40.0%
TTTGACGGTGGTTTATGTAC+CGG - chr5_3:9299060-9299079 Msa0797220:CDS 40.0%
GTTGAAACTCCGGTTCATTT+GGG - chr5_3:9299094-9299113 Msa0797220:CDS 40.0%
TGTATCATTGCAGGGTAGTA+AGG - chr5_3:9299120-9299139 Msa0797220:intron 40.0%
! TATATCGAATCCGAGGGTTT+TGG - chr5_3:9299162-9299181 Msa0797220:intron 40.0%
!!! TTGGAGTAATGCTGTTTTGG+AGG - chr5_3:9299252-9299271 Msa0797220:intron 40.0%
!!! CTGTTTTGGAGGTTGTGATT+GGG - chr5_3:9299263-9299282 Msa0797220:intron 40.0%
!!! TGTTTTGGAGGTTGTGATTG+GGG - chr5_3:9299264-9299283 Msa0797220:intron 40.0%
AGAAGTCCATTTGATATGCG+CGG + chr5_3:9299338-9299357 None:intergenic 40.0%
! AGTAGAGCTAAAAGCACAAC+GGG + chr5_3:9299760-9299779 None:intergenic 40.0%
! GAGTAGAGCTAAAAGCACAA+CGG + chr5_3:9299761-9299780 None:intergenic 40.0%
GCTCATATTCACCGATAAGT+GGG + chr5_3:9299807-9299826 None:intergenic 40.0%
AGCTCATATTCACCGATAAG+TGG + chr5_3:9299808-9299827 None:intergenic 40.0%
AAAGGAAGGGCAATCTAGTT+AGG - chr5_3:9300069-9300088 Msa0797220:intron 40.0%
AAGGGCAATCTAGTTAGGAT+AGG - chr5_3:9300074-9300093 Msa0797220:intron 40.0%
TTTGAGAAGTTACGCAAGAG+GGG - chr5_3:9300204-9300223 Msa0797220:intron 40.0%
TCAACTTTGCACTTGTCTGT+TGG - chr5_3:9300384-9300403 Msa0797220:intron 40.0%
!! GTCTGTTGGTAATCAAACAC+AGG - chr5_3:9300398-9300417 Msa0797220:intron 40.0%
GTCTTGTATTGGATCATCCA+AGG - chr5_3:9300433-9300452 Msa0797220:intron 40.0%
CTTGTATTGGATCATCCAAG+GGG - chr5_3:9300435-9300454 Msa0797220:intron 40.0%
! AGTTTTTGACGGAAACGTCA+AGG - chr5_3:9300509-9300528 Msa0797220:intron 40.0%
GTATCAATCCATAGCAAGAC+AGG + chr5_3:9300750-9300769 None:intergenic 40.0%
GCATTAATTATGCTGGGAGT+AGG - chr5_3:9300826-9300845 Msa0797220:intron 40.0%
! AGTTAAAGAGTGGAGTGCTA+AGG + chr5_3:9300869-9300888 None:intergenic 40.0%
! TGTGTTTCTGATGCTGATTG+AGG - chr5_3:9301054-9301073 Msa0797220:CDS 40.0%
ATTTATTGAGCTAGGACAGG+TGG - chr5_3:9301146-9301165 Msa0797220:CDS 40.0%
TGACGTCATCAGCAATGATT+TGG + chr5_3:9301327-9301346 None:intergenic 40.0%
GTGCTTGGAAATACAGAAGT+TGG + chr5_3:9301390-9301409 None:intergenic 40.0%
TCCGGCAATTGTAACAATTG+AGG - chr5_3:9301678-9301697 Msa0797220:CDS 40.0%
GCCTCAATTGTTACAATTGC+CGG + chr5_3:9301682-9301701 None:intergenic 40.0%
TGCGTTGTTGAATGTGACTC+TGG + chr5_3:9298609-9298628 None:intergenic 45.0%
!! AGTCTTCTAAGGTTTCAGCG+AGG + chr5_3:9298664-9298683 None:intergenic 45.0%
!! AAGGGTTCGTGTTTTCGAGA+AGG + chr5_3:9298758-9298777 None:intergenic 45.0%
GAGAAGTCGTTGAAGCGAAA+GGG + chr5_3:9298776-9298795 None:intergenic 45.0%
GATTAATGGAATGGGTGCAC+CGG - chr5_3:9299036-9299055 Msa0797220:CDS 45.0%
!! TTTATGTACCGGAGGGTGTT+CGG - chr5_3:9299071-9299090 Msa0797220:CDS 45.0%
GGTTGAAACTCCGGTTCATT+TGG - chr5_3:9299093-9299112 Msa0797220:CDS 45.0%
TCATTGCAGGGTAGTAAGGA+AGG - chr5_3:9299124-9299143 Msa0797220:intron 45.0%
!! TGGGGAGGTTGATATAGTTG+AGG - chr5_3:9299201-9299220 Msa0797220:intron 45.0%
!!! GCTGTTTTGGAGGTTGTGAT+TGG - chr5_3:9299262-9299281 Msa0797220:intron 45.0%
! CAAATGGACTTCTGTTCGTC+AGG - chr5_3:9299345-9299364 Msa0797220:intron 45.0%
! AAAAGCACAACGGGCATAGT+GGG + chr5_3:9299751-9299770 None:intergenic 45.0%
! TAAAAGCACAACGGGCATAG+TGG + chr5_3:9299752-9299771 None:intergenic 45.0%
CAAGTGATTCCATTAGGTCC+AGG + chr5_3:9299849-9299868 None:intergenic 45.0%
GAGCTTACAGAAGTAAGCAC+AGG - chr5_3:9300297-9300316 Msa0797220:intron 45.0%
CTTACAGAAGTAAGCACAGG+AGG - chr5_3:9300300-9300319 Msa0797220:intron 45.0%
GATAACTCTGTCACTGTGTC+CGG + chr5_3:9300366-9300385 None:intergenic 45.0%
TGCATTGTGGCTCATTCACA+GGG - chr5_3:9300480-9300499 Msa0797220:intron 45.0%
! CAGGGACAAGCAGTTTTTGA+CGG - chr5_3:9300498-9300517 Msa0797220:intron 45.0%
ACGGAAACGTCAAGGTTAAC+AGG - chr5_3:9300517-9300536 Msa0797220:intron 45.0%
! TAAAGAGTGGAGTGCTAAGG+AGG + chr5_3:9300866-9300885 None:intergenic 45.0%
! TTTGTTTGATGGTTGGGGTG+GGG + chr5_3:9300893-9300912 None:intergenic 45.0%
! GTTTGTTTGATGGTTGGGGT+GGG + chr5_3:9300894-9300913 None:intergenic 45.0%
TTGCACGAGGTTCAAGAAGA+AGG + chr5_3:9301282-9301301 None:intergenic 45.0%
GTCACTTATTGCAGCTCCAT+GGG + chr5_3:9301356-9301375 None:intergenic 45.0%
!! ACAGAAGTTGGCTTTGTTCC+AGG + chr5_3:9301378-9301397 None:intergenic 45.0%
CTTCTGTATTTCCAAGCACG+TGG - chr5_3:9301391-9301410 Msa0797220:CDS 45.0%
ATCTATCACTTCCCCTCCAA+AGG + chr5_3:9301455-9301474 None:intergenic 45.0%
! CAACTAGAAGTGCATGGTGA+TGG + chr5_3:9301710-9301729 None:intergenic 45.0%
CAGCGAGGTCGAGAATGAAT+GGG + chr5_3:9298649-9298668 None:intergenic 50.0%
TCAGCGAGGTCGAGAATGAA+TGG + chr5_3:9298650-9298669 None:intergenic 50.0%
TGTAGGGACGGAGTCTTCTA+AGG + chr5_3:9298675-9298694 None:intergenic 50.0%
TGTGGAGAGGTTGTGGTGTA+GGG + chr5_3:9298691-9298710 None:intergenic 50.0%
GATTCTCGAAGACTGTGGAG+AGG + chr5_3:9298704-9298723 None:intergenic 50.0%
!! TCGTGTTTTCGAGAAGGCCA+TGG + chr5_3:9298752-9298771 None:intergenic 50.0%
GGAGAAGTCGTTGAAGCGAA+AGG + chr5_3:9298777-9298796 None:intergenic 50.0%
! TTGGTATCTGGATTGGACGG+TGG - chr5_3:9298998-9299017 Msa0797220:CDS 50.0%
AATGGGTGCACCGGATTTGA+CGG - chr5_3:9299045-9299064 Msa0797220:CDS 50.0%
ACGGTGGTTTATGTACCGGA+GGG - chr5_3:9299064-9299083 Msa0797220:CDS 50.0%
!! TTATGTACCGGAGGGTGTTC+GGG - chr5_3:9299072-9299091 Msa0797220:CDS 50.0%
!! ATCGAATCCGAGGGTTTTGG+TGG - chr5_3:9299165-9299184 Msa0797220:intron 50.0%
!!! GTTTTGGTGGTGGTGGAGAA+AGG - chr5_3:9299178-9299197 Msa0797220:intron 50.0%
TTGGAGGTTGTGATTGGGGA+AGG - chr5_3:9299268-9299287 Msa0797220:intron 50.0%
TGTGATTGGGGAAGGTGGTA+AGG - chr5_3:9299276-9299295 Msa0797220:intron 50.0%
TGCTTGCCGCGCATATCAAA+TGG - chr5_3:9299329-9299348 Msa0797220:intron 50.0%
AAAGCACAACGGGCATAGTG+GGG + chr5_3:9299750-9299769 None:intergenic 50.0%
AATCGCTCGTGCATAGCAGA+GGG + chr5_3:9299783-9299802 None:intergenic 50.0%
ACGAGCGATTGCCCACTTAT+CGG - chr5_3:9299793-9299812 Msa0797220:intron 50.0%
GTACACAACCAGTCACTACC+TGG - chr5_3:9299828-9299847 Msa0797220:CDS 50.0%
CATTAGGTCCAGGTAGTGAC+TGG + chr5_3:9299839-9299858 None:intergenic 50.0%
CAGTCACTACCTGGACCTAA+TGG - chr5_3:9299837-9299856 Msa0797220:CDS 50.0%
GTAAGCACAGGAGGCAAACT+TGG - chr5_3:9300309-9300328 Msa0797220:intron 50.0%
ATCTGACGGGAATAACCCCT+TGG + chr5_3:9300453-9300472 None:intergenic 50.0%
GTGCATTGTGGCTCATTCAC+AGG - chr5_3:9300479-9300498 Msa0797220:intron 50.0%
! AGTGGAGTGCTAAGGAGGTT+GGG + chr5_3:9300861-9300880 None:intergenic 50.0%
! GGTTTGTTTGATGGTTGGGG+TGG + chr5_3:9300895-9300914 None:intergenic 50.0%
TATGCTCAGCAGACAGATGC+TGG - chr5_3:9301241-9301260 Msa0797220:CDS 50.0%
GATGACGTCAAGTGTTCCCA+TGG - chr5_3:9301337-9301356 Msa0797220:CDS 50.0%
GGTCACTTATTGCAGCTCCA+TGG + chr5_3:9301357-9301376 None:intergenic 50.0%
TGGAGCTGCAATAAGTGACC+TGG - chr5_3:9301357-9301376 Msa0797220:CDS 50.0%
CTGAATCAATGCCACGTGCT+TGG + chr5_3:9301405-9301424 None:intergenic 50.0%
GGACTCGCAGTTGTGTATGT+AGG - chr5_3:9301785-9301804 Msa0797220:CDS 50.0%
GAGAGGTTGTGGTGTAGGGA+CGG + chr5_3:9298687-9298706 None:intergenic 55.0%
CTGTGGAGAGGTTGTGGTGT+AGG + chr5_3:9298692-9298711 None:intergenic 55.0%
CGAAGACTGTGGAGAGGTTG+TGG + chr5_3:9298698-9298717 None:intergenic 55.0%
! GATTTGGGATGAGCGGAGGA+AGG + chr5_3:9298798-9298817 None:intergenic 55.0%
!! TGGTGGTGGTGGTTGGGATT+GGG + chr5_3:9298829-9298848 None:intergenic 55.0%
ACGTGGCAGGGGAATTGATC+GGG + chr5_3:9298860-9298879 None:intergenic 55.0%
GACGTGGCAGGGGAATTGAT+CGG + chr5_3:9298861-9298880 None:intergenic 55.0%
TCAACGATGCTGACGTGGCA+GGG + chr5_3:9298872-9298891 None:intergenic 55.0%
TGCCACGTCAGCATCGTTGA+CGG - chr5_3:9298872-9298891 Msa0797220:CDS 55.0%
GACGGTGGTTTATGTACCGG+AGG - chr5_3:9299063-9299082 Msa0797220:CDS 55.0%
GTTTCAACCCGAACACCCTC+CGG + chr5_3:9299082-9299101 None:intergenic 55.0%
!! GGGTGTTCGGGTTGAAACTC+CGG - chr5_3:9299084-9299103 Msa0797220:CDS 55.0%
!! GAATCCGAGGGTTTTGGTGG+TGG - chr5_3:9299168-9299187 Msa0797220:intron 55.0%
TCCACCACCACCAAAACCCT+CGG + chr5_3:9299175-9299194 None:intergenic 55.0%
!! TTGGTGGTGGTGGAGAAAGG+TGG - chr5_3:9299181-9299200 Msa0797220:intron 55.0%
!! TGGTGGTGGTGGAGAAAGGT+GGG - chr5_3:9299182-9299201 Msa0797220:intron 55.0%
GAGGTTGTGATTGGGGAAGG+TGG - chr5_3:9299271-9299290 Msa0797220:intron 55.0%
CAATCGCTCGTGCATAGCAG+AGG + chr5_3:9299784-9299803 None:intergenic 55.0%
GCACAGGAGGCAAACTTGGA+AGG - chr5_3:9300313-9300332 Msa0797220:intron 55.0%
! GAGTGGAGTGCTAAGGAGGT+TGG + chr5_3:9300862-9300881 None:intergenic 55.0%
GGGGTGGGGAAGTTAAAGAG+TGG + chr5_3:9300879-9300898 None:intergenic 55.0%
! GGAGGATTTGGGATGAGCGG+AGG + chr5_3:9298802-9298821 None:intergenic 60.0%
! CGGGGAGGATTTGGGATGAG+CGG + chr5_3:9298805-9298824 None:intergenic 60.0%
GATTGGGGCGGGGAGGATTT+GGG + chr5_3:9298813-9298832 None:intergenic 60.0%
!! GGTGGTGGTGGTTGGGATTG+GGG + chr5_3:9298828-9298847 None:intergenic 60.0%
!! GTGGTGGTGGTGGTTGGGAT+TGG + chr5_3:9298830-9298849 None:intergenic 60.0%
GTGGCAGGGGAATTGATCGG+GGG + chr5_3:9298858-9298877 None:intergenic 60.0%
CGTGGCAGGGGAATTGATCG+GGG + chr5_3:9298859-9298878 None:intergenic 60.0%
CAACGATGCTGACGTGGCAG+GGG + chr5_3:9298871-9298890 None:intergenic 60.0%
GTCAACGATGCTGACGTGGC+AGG + chr5_3:9298873-9298892 None:intergenic 60.0%
GACCGTCAACGATGCTGACG+TGG + chr5_3:9298877-9298896 None:intergenic 60.0%
!!! TCCGAGGGTTTTGGTGGTGG+TGG - chr5_3:9299171-9299190 Msa0797220:intron 60.0%
!! GGTGGTGGTGGAGAAAGGTG+GGG - chr5_3:9299183-9299202 Msa0797220:intron 60.0%
GGATTGGGGCGGGGAGGATT+TGG + chr5_3:9298814-9298833 None:intergenic 65.0%
TGGTGGTTGGGATTGGGGCG+GGG + chr5_3:9298823-9298842 None:intergenic 65.0%
GTGGTGGTTGGGATTGGGGC+GGG + chr5_3:9298824-9298843 None:intergenic 65.0%
! GGTGGTGGTTGGGATTGGGG+CGG + chr5_3:9298825-9298844 None:intergenic 65.0%
!! CGGTGGTGGTGGTGGTGGTT+GGG + chr5_3:9298835-9298854 None:intergenic 65.0%
GAATTGATCGGGGGCGGTGG+TGG + chr5_3:9298849-9298868 None:intergenic 65.0%
GCAGGGGAATTGATCGGGGG+CGG + chr5_3:9298855-9298874 None:intergenic 65.0%
GGGTGCACCGGATTTGACGG+TGG - chr5_3:9299048-9299067 Msa0797220:CDS 65.0%
!! GGTGGTGGAGAAAGGTGGGG+AGG - chr5_3:9299186-9299205 Msa0797220:intron 65.0%
TGGTTGGGATTGGGGCGGGG+AGG + chr5_3:9298820-9298839 None:intergenic 70.0%
!! GCGGTGGTGGTGGTGGTGGT+TGG + chr5_3:9298836-9298855 None:intergenic 70.0%
! TTGATCGGGGGCGGTGGTGG+TGG + chr5_3:9298846-9298865 None:intergenic 70.0%
GGGGAATTGATCGGGGGCGG+TGG + chr5_3:9298852-9298871 None:intergenic 70.0%
!! ATCGGGGGCGGTGGTGGTGG+TGG + chr5_3:9298843-9298862 None:intergenic 75.0%
!!! GGGGGCGGTGGTGGTGGTGG+TGG + chr5_3:9298840-9298859 None:intergenic 80.0%
Chromosome Type Strat End Strand Name
chr5_3 gene 9298501 9301858 9298501 ID=Msa0797220;Name=Msa0797220
chr5_3 mRNA 9298501 9301858 9298501 ID=Msa0797220-mRNA-1;Parent=Msa0797220;Name=Msa0797220-mRNA-1;_AED=0.00;_eAED=0.00;_QI=8|1|1|1|1|1|3|309|475
chr5_3 exon 9298501 9299119 9298501 ID=Msa0797220-mRNA-1:exon:4069;Parent=Msa0797220-mRNA-1
chr5_3 exon 9299821 9300080 9299821 ID=Msa0797220-mRNA-1:exon:4068;Parent=Msa0797220-mRNA-1
chr5_3 exon 9300993 9301858 9300993 ID=Msa0797220-mRNA-1:exon:4067;Parent=Msa0797220-mRNA-1
chr5_3 five_prime_UTR 9301851 9301858 9301851 ID=Msa0797220-mRNA-1:five_prime_utr;Parent=Msa0797220-mRNA-1
chr5_3 CDS 9300993 9301850 9300993 ID=Msa0797220-mRNA-1:cds;Parent=Msa0797220-mRNA-1
chr5_3 CDS 9299821 9300080 9299821 ID=Msa0797220-mRNA-1:cds;Parent=Msa0797220-mRNA-1
chr5_3 CDS 9298810 9299119 9298810 ID=Msa0797220-mRNA-1:cds;Parent=Msa0797220-mRNA-1
chr5_3 three_prime_UTR 9298501 9298809 9298501 ID=Msa0797220-mRNA-1:three_prime_utr;Parent=Msa0797220-mRNA-1
Gene Sequence

>Msa0797220

ATGAGTGGCATAGCATTAACACCCGCAGCATTCAACTCCATAATCCCATCATCTTCTTCTTCATCATCGAAATCTCAAAAACTGATCAGAACCAAAACCAGAGTCACATTCAACAACGCAATTTCAATCTCTTCAGACCCATTCATTCTCGACCTCGCTGAAACCTTAGAAGACTCCGTCCCTACACCACAACCTCTCCACAGTCTTCGAGAATCTTCTTCTCAATCTCTTCTCTCTTCTCCATGGCCTTCTCGAAAACACGAACCCTTTCGCTTCAACGACTTCTCCTTCCTCCGCTCATCCCAAATCCTCCCCGCCCCAATCCCAACCACCACCACCACCACCGCCCCCGATCAATTCCCCTGCCACGTCAGCATCGTTGACGGTCACTTCATACAATCAACTTCAAAATTCTCGGAGTTTTCAGATGGGGTTTACGTTGGTAATTTGTCAAAATTGAATGGTGTTATTGCTAAGAGGGTTTTGGAATTGGTATCTGGATTGGACGGTGGAGATTTATTTTGGTCGATTAATGGAATGGGTGCACCGGATTTGACGGTGGTTTATGTACCGGAGGGTGTTCGGGTTGAAACTCCGGTTCATTTGGGTTATGTATCATTGCAGGGTAGTAAGGAAGGTGAGAGTGAGATGTATATATCGAATCCGAGGGTTTTGGTGGTGGTGGAGAAAGGTGGGGAGGTTGATATAGTTGAGGAGTTTGAAGGGAATGAGAATGAGTGTTATTGGAGTAATGCTGTTTTGGAGGTTGTGATTGGGGAAGGTGGTAAGGTTAGACATTCTTATGTTCAGAATCAGTCGTTGCTTGCCGCGCATATCAAATGGACTTCTGTTCGTCAGGAAGCATCTAGTACATATGAGCTTACAGAAGTAAGCACAGGAGGCAAACTTGGAAGGCACAATCTTCATATCAAACAACTAGGTCCGGACACAGTGACAGAGTTATCAACTTTGCACTTGTCTGTTGGTAATCAAACACAGGATCTTCACAGTAGTCTTGTATTGGATCATCCAAGGGGTTATTCCCGTCAGATTCATAAGTGCATTGTGGCTCATTCACAGGGACAAGCAGTTTTTGACGGAAACGTCAAGGTTAACAGGTATGCTCAGCAGACAGATGCTGGACAGTTATCAAGAAGCCTTCTTCTTGAACCTCGTGCAACTGTAAATGTTAAACCAAATCTCCAAATCATTGCTGATGACGTCAAGTGTTCCCATGGAGCTGCAATAAGTGACCTGGAACAAAGCCAACTTCTGTATTTCCAAGCACGTGGCATTGATTCAGAAACAGCTAGAAGGGTTCTAATTTTTGCCTTTGGAGGGGAAGTGATAGATAAGATTCCCAATTCTTCCATTAGAGATAGAGTACGAAGTCAGATTAAAAGTTTATTGGATCCATCTCCTAAATGA

Protein sequence

>Msa0797220

MSGIALTPAAFNSIIPSSSSSSSKSQKLIRTKTRVTFNNAISISSDPFILDLAETLEDSVPTPQPLHSLRESSSQSLLSSPWPSRKHEPFRFNDFSFLRSSQILPAPIPTTTTTTAPDQFPCHVSIVDGHFIQSTSKFSEFSDGVYVGNLSKLNGVIAKRVLELVSGLDGGDLFWSINGMGAPDLTVVYVPEGVRVETPVHLGYVSLQGSKEGESEMYISNPRVLVVVEKGGEVDIVEEFEGNENECYWSNAVLEVVIGEGGKVRHSYVQNQSLLAAHIKWTSVRQEASSTYELTEVSTGGKLGRHNLHIKQLGPDTVTELSTLHLSVGNQTQDLHSSLVLDHPRGYSRQIHKCIVAHSQGQAVFDGNVKVNRYAQQTDAGQLSRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEQSQLLYFQARGIDSETARRVLIFAFGGEVIDKIPNSSIRDRVRSQIKSLLDPSPK*