AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1002310

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1002310 MtrunA17_Chr6g0484051 95.035 141 7 0 1 141 509 649 3.61e-97 292
Msa1002310 MtrunA17_Chr6g0483981 77.465 142 31 1 1 141 428 569 5.67e-74 230
Msa1002310 MtrunA17_Chr6g0484071 73.944 142 36 1 1 141 219 360 1.05e-73 224
Msa1002310 MtrunA17_Chr6g0483821 76.761 142 32 1 1 141 520 661 2.13e-72 228
Msa1002310 MtrunA17_Chr6g0484031 76.259 139 32 1 1 138 364 502 1.20e-71 223
Msa1002310 MtrunA17_Chr6g0484021 75.714 140 33 1 1 139 467 606 4.37e-71 224
Msa1002310 MtrunA17_Chr6g0483811 73.239 142 36 2 1 141 219 359 9.35e-71 216
Msa1002310 MtrunA17_Chr6g0484041 76.259 139 32 1 1 138 483 621 1.69e-70 223
Msa1002310 MtrunA17_Chr6g0483851 73.944 142 36 1 1 141 571 712 8.82e-69 219
Msa1002310 MtrunA17_Chr6g0483791 73.239 142 36 2 1 141 530 670 1.96e-67 215
Msa1002310 MtrunA17_Chr6g0484101 77.064 109 24 1 34 141 1 109 1.14e-56 172
Msa1002310 MtrunA17_Chr8g0391231 60.140 143 53 3 1 139 503 645 2.36e-56 186
Msa1002310 MtrunA17_Chr1g0209471 60.150 133 52 1 3 134 227 359 1.32e-54 175
Msa1002310 MtrunA17_Chr7g0253471 58.015 131 55 0 3 133 45 175 1.79e-54 169
Msa1002310 MtrunA17_Chr1g0209401 60.741 135 50 2 3 135 217 350 1.99e-54 174
Msa1002310 MtrunA17_Chr7g0232441 60.294 136 47 2 3 134 487 619 2.53e-54 180
Msa1002310 MtrunA17_Chr7g0232421 59.701 134 51 2 3 134 227 359 5.55e-52 168
Msa1002310 MtrunA17_Chr4g0022301 54.545 132 59 1 1 131 1 132 2.82e-51 159
Msa1002310 MtrunA17_Chr1g0157951 56.250 128 56 0 1 128 339 466 3.34e-51 169
Msa1002310 MtrunA17_Chr1g0209501 56.522 138 59 1 3 139 472 609 3.54e-51 171
Msa1002310 MtrunA17_Chr7g0251051 59.848 132 52 1 3 133 476 607 4.18e-51 171
Msa1002310 MtrunA17_Chr7g0251001 56.716 134 56 1 3 134 222 355 6.66e-51 166
Msa1002310 MtrunA17_Chr1g0212821 57.692 130 54 1 3 131 245 374 1.78e-50 165
Msa1002310 MtrunA17_Chr7g0251101 58.333 132 54 1 3 133 522 653 3.29e-50 169
Msa1002310 MtrunA17_Chr1g0157811 56.250 128 56 0 1 128 358 485 4.75e-50 167
Msa1002310 MtrunA17_Chr7g0251081 56.923 130 55 1 3 131 272 401 1.52e-49 163
Msa1002310 MtrunA17_Chr1g0157991 55.469 128 57 0 1 128 552 679 2.79e-49 167
Msa1002310 MtrunA17_Chr7g0251071 57.895 133 54 1 3 133 516 648 4.64e-49 166
Msa1002310 MtrunA17_Chr4g0022331 56.061 132 57 1 1 131 693 824 9.64e-49 166
Msa1002310 MtrunA17_Chr7g0251031 54.815 135 59 1 1 133 87 221 1.04e-48 156
Msa1002310 MtrunA17_Chr7g0251061 58.333 132 54 1 3 133 511 642 5.56e-48 163
Msa1002310 MtrunA17_Chr1g0158191 54.688 128 58 0 1 128 549 676 7.02e-48 163
Msa1002310 MtrunA17_Chr1g0157791 55.469 128 57 0 1 128 545 672 7.40e-48 163
Msa1002310 MtrunA17_Chr1g0158151 52.344 128 61 0 1 128 544 671 7.52e-48 163
Msa1002310 MtrunA17_Chr7g0250991 55.385 130 55 2 3 131 70 197 2.46e-47 152
Msa1002310 MtrunA17_Chr1g0209511 55.469 128 55 2 3 128 481 608 2.96e-46 158
Msa1002310 MtrunA17_Chr3g0088321 50.794 126 62 0 1 126 211 336 4.53e-46 153
Msa1002310 MtrunA17_Chr1g0158751 49.612 129 64 1 1 128 254 382 1.50e-45 153
Msa1002310 MtrunA17_Chr1g0158301 54.331 127 57 1 1 126 552 678 1.85e-45 157
Msa1002310 MtrunA17_Chr1g0158541 53.543 127 58 1 1 126 554 680 2.41e-45 156
Msa1002310 MtrunA17_Chr7g0250931 52.899 138 64 1 3 139 711 848 2.47e-45 157
Msa1002310 MtrunA17_Chr1g0158091 52.344 128 61 0 1 128 230 357 2.50e-45 151
Msa1002310 MtrunA17_Chr1g0158341 48.438 128 66 0 1 128 187 314 3.18e-45 150
Msa1002310 MtrunA17_Chr1g0158481 48.438 128 66 0 1 128 84 211 3.54e-45 147
Msa1002310 MtrunA17_Chr1g0158041 50.781 128 63 0 1 128 549 676 5.54e-45 155
Msa1002310 MtrunA17_Chr1g0158771 50.769 130 64 0 1 130 448 577 6.63e-45 154
Msa1002310 MtrunA17_Chr1g0158571 51.938 129 61 1 1 128 371 499 8.12e-45 153
Msa1002310 MtrunA17_Chr7g0250741 53.788 132 60 1 3 133 697 828 1.05e-44 155
Msa1002310 MtrunA17_Chr1g0158761 51.969 127 61 0 1 127 493 619 4.90e-44 152
Msa1002310 MtrunA17_Chr1g0158411 50.000 128 64 0 1 128 563 690 5.96e-44 152
Msa1002310 MtrunA17_Chr1g0158441 48.438 128 66 0 1 128 187 314 9.66e-44 147
Msa1002310 MtrunA17_Chr4g0037001 52.273 132 59 2 1 130 467 596 1.44e-43 150
Msa1002310 MtrunA17_Chr1g0160771 48.611 144 68 2 1 141 460 600 2.95e-43 150
Msa1002310 MtrunA17_Chr1g0160681 51.128 133 59 2 1 130 224 353 5.47e-43 145
Msa1002310 MtrunA17_Chr1g0160631 48.837 129 66 0 1 129 41 169 4.87e-42 138
Msa1002310 MtrunA17_Chr1g0160731 50.000 140 61 3 1 134 456 592 5.78e-42 146
Msa1002310 MtrunA17_Chr6g0467711 48.438 128 66 0 1 128 559 686 2.44e-41 145
Msa1002310 MtrunA17_Chr1g0160581 50.758 132 59 2 1 129 464 592 2.54e-41 144
Msa1002310 MtrunA17_Chr1g0158311 51.145 131 59 3 1 129 447 574 3.57e-41 144
Msa1002310 MtrunA17_Chr1g0158631 48.062 129 66 1 1 128 542 670 4.35e-41 144
Msa1002310 MtrunA17_Chr1g0208841 52.273 132 41 2 3 134 186 295 6.64e-41 138
Msa1002310 MtrunA17_Chr1g0158661 48.062 129 66 1 1 128 528 656 8.54e-41 144
Msa1002310 MtrunA17_Chr1g0158531 50.382 131 60 3 1 129 449 576 4.81e-40 141
Msa1002310 MtrunA17_Chr1g0160721 49.612 129 65 0 1 129 510 638 5.80e-40 141
Msa1002310 MtrunA17_Chr1g0158181 48.889 135 62 3 1 132 485 615 2.59e-39 139
Msa1002310 MtrunA17_Chr1g0157911 49.606 127 63 1 1 126 557 683 1.21e-38 138
Msa1002310 MtrunA17_Chr1g0160561 49.612 129 65 0 1 129 505 633 1.60e-38 137
Msa1002310 MtrunA17_Chr1g0157931 48.819 127 64 1 1 126 431 557 2.75e-38 136
Msa1002310 MtrunA17_Chr1g0157881 49.219 128 62 2 1 126 624 750 4.29e-38 136
Msa1002310 MtrunA17_Chr1g0158651 46.667 135 68 4 1 133 466 598 1.30e-37 134
Msa1002310 MtrunA17_Chr1g0158391 47.586 145 69 4 1 141 416 557 2.15e-37 133
Msa1002310 MtrunA17_Chr1g0157901 44.828 145 72 4 1 141 131 271 2.22e-37 128
Msa1002310 MtrunA17_Chr1g0158051 44.056 143 73 3 1 137 463 604 2.46e-37 134
Msa1002310 MtrunA17_Chr1g0160531 48.837 129 65 1 1 129 283 410 4.05e-37 131
Msa1002310 MtrunA17_Chr1g0158611 45.926 135 69 4 1 133 210 342 4.06e-37 129
Msa1002310 MtrunA17_Chr6g0467681 45.455 143 70 4 1 140 423 560 4.26e-37 132
Msa1002310 MtrunA17_Chr6g0467641 48.062 129 60 3 1 126 352 476 5.34e-37 132
Msa1002310 MtrunA17_Chr6g0467661 48.062 129 60 3 1 126 423 547 5.82e-37 132
Msa1002310 MtrunA17_Chr1g0157941 45.775 142 57 3 1 132 418 549 6.85e-37 132
Msa1002310 MtrunA17_Chr1g0160701 47.656 128 67 0 1 128 504 631 1.32e-36 132
Msa1002310 MtrunA17_Chr6g0467701 45.455 143 70 4 1 140 193 330 2.34e-36 127
Msa1002310 MtrunA17_Chr1g0158101 45.139 144 72 3 1 141 440 579 3.27e-36 130
Msa1002310 MtrunA17_Chr1g0157781 49.254 134 56 5 1 129 462 588 7.98e-36 129
Msa1002310 MtrunA17_Chr1g0157861 45.669 127 68 1 1 126 593 719 1.74e-35 129
Msa1002310 MtrunA17_Chr1g0157801 48.507 134 57 4 1 129 457 583 1.78e-35 128
Msa1002310 MtrunA17_Chr1g0157871 47.407 135 62 4 1 130 420 550 1.85e-35 128
Msa1002310 MtrunA17_Chr1g0157971 46.763 139 61 3 1 138 461 587 3.38e-35 127
Msa1002310 MtrunA17_Chr3g0088341 46.970 132 58 3 1 126 439 564 3.67e-35 127
Msa1002310 MtrunA17_Chr1g0158511 47.692 130 60 4 1 126 437 562 1.64e-34 125
Msa1002310 MtrunA17_Chr1g0158711 47.692 130 60 4 1 126 420 545 2.66e-34 125
Msa1002310 MtrunA17_Chr1g0158321 47.059 136 64 4 1 132 193 324 2.77e-34 122
Msa1002310 MtrunA17_Chr1g0158471 43.885 139 73 3 1 138 437 571 3.21e-34 125
Msa1002310 MtrunA17_Chr1g0160711 46.923 130 69 0 1 130 487 616 1.49e-32 120
Msa1002310 MtrunA17_Chr7g0238401 45.802 131 67 3 1 130 505 632 2.01e-32 120
Msa1002310 MtrunA17_Chr1g0160761 49.206 126 64 0 1 126 494 619 2.43e-32 120
Msa1002310 MtrunA17_Chr7g0250891 51.000 100 47 1 34 131 1 100 5.40e-32 110
Msa1002310 MtrunA17_Chr4g0036991 46.875 128 61 3 1 126 474 596 1.25e-31 117
Msa1002310 MtrunA17_Chr1g0209421 50.515 97 47 1 39 134 1 97 2.94e-31 107
Msa1002310 MtrunA17_Chr1g0209491 51.020 98 45 2 39 134 1 97 3.17e-31 107
Msa1002310 MtrunA17_Chr2g0297911 46.825 126 58 4 1 123 233 352 6.58e-28 106
Msa1002310 MtrunA17_Chr2g0297951 42.857 126 65 4 5 127 296 417 2.99e-27 105
Msa1002310 MtrunA17_Chr2g0297961 45.238 126 60 4 1 123 232 351 6.45e-27 103
Msa1002310 MtrunA17_Chr2g0297921 42.063 126 66 4 5 127 306 427 5.31e-26 101
Msa1002310 MtrunA17_Chr2g0297901 44.915 118 59 3 1 115 134 248 7.45e-26 99.4
Msa1002310 MtrunA17_Chr3g0137741 45.865 133 54 6 5 130 654 775 1.20e-24 98.2
Msa1002310 MtrunA17_Chr6g0467281 42.857 133 62 6 1 126 648 773 4.05e-24 96.7
Msa1002310 MtrunA17_Chr1g0160621 56.923 65 28 0 1 65 41 105 3.50e-23 87.8
Msa1002310 MtrunA17_Chr2g0314611 45.736 129 54 7 5 125 647 767 1.35e-22 92.4
Msa1002310 MtrunA17_Chr2g0318171 44.186 129 56 7 5 125 643 763 2.22e-22 91.7
Msa1002310 MtrunA17_Chr6g0467301 40.000 140 68 7 1 131 653 785 2.32e-22 91.7
Msa1002310 MtrunA17_Chr4g0063701 41.463 123 69 3 4 126 688 807 2.81e-22 91.7
Msa1002310 MtrunA17_Chr2g0311511 36.923 130 76 4 2 128 603 729 7.67e-22 90.1
Msa1002310 MtrunA17_Chr8g0348661 39.437 142 67 6 1 128 641 777 1.03e-21 89.7
Msa1002310 MtrunA17_Chr4g0063251 37.037 135 70 5 1 124 266 396 2.54e-21 88.6
Msa1002310 MtrunA17_Chr2g0306811 39.098 133 69 3 1 123 268 398 3.02e-21 88.2
Msa1002310 MtrunA17_Chr1g0149381 44.715 123 60 6 5 123 663 781 4.62e-21 88.2
Msa1002310 MtrunA17_Chr4g0063691 40.800 125 67 5 6 126 701 822 6.81e-21 87.4
Msa1002310 MtrunA17_Chr1g0202331 40.625 128 67 7 4 126 695 818 8.38e-21 87.4
Msa1002310 MtrunA17_Chr1g0160691 45.349 86 47 0 43 128 4 89 1.12e-20 81.3
Msa1002310 MtrunA17_Chr1g0160551 77.273 44 10 0 1 44 29 72 1.83e-20 80.1
Msa1002310 MtrunA17_Chr2g0311541 36.923 130 76 4 2 128 657 783 6.27e-20 84.7
Msa1002310 MtrunA17_Chr1g0161631 35.507 138 76 5 1 128 656 790 6.79e-20 84.7
Msa1002310 MtrunA17_Chr2g0311551 36.923 130 76 4 2 128 894 1020 1.24e-19 84.0
Msa1002310 MtrunA17_Chr8g0347571 34.014 147 79 6 6 141 735 874 1.99e-19 83.6
Msa1002310 MtrunA17_Chr2g0311521 36.029 136 81 4 2 134 900 1032 2.10e-19 83.2
Msa1002310 MtrunA17_Chr1g0158131 64.815 54 19 0 1 54 362 415 4.14e-19 82.0
Msa1002310 MtrunA17_Chr2g0333091 38.849 139 76 6 5 139 654 787 4.28e-19 82.4
Msa1002310 MtrunA17_Chr8g0338471 36.434 129 75 5 2 126 681 806 7.43e-19 81.6
Msa1002310 MtrunA17_Chr1g0205561 35.115 131 74 5 2 124 358 485 6.82e-18 79.0
Msa1002310 MtrunA17_Chr2g0297941 34.426 122 75 2 5 123 254 373 1.70e-17 77.4
Msa1002310 MtrunA17_Chr5g0399561 38.583 127 71 5 5 127 674 797 2.79e-17 77.4
Msa1002310 MtrunA17_Chr1g0158351 40.187 107 36 6 1 99 131 217 4.22e-17 74.3
Msa1002310 MtrunA17_Chr8g0338501 35.659 129 76 5 2 126 712 837 5.37e-17 76.3
Msa1002310 MtrunA17_Chr5g0413171 34.266 143 82 5 6 139 251 390 1.04e-16 75.5
Msa1002310 MtrunA17_Chr5g0399591 37.500 128 73 5 4 127 670 794 1.43e-16 75.1
Msa1002310 MtrunA17_Chr8g0358781 34.959 123 75 3 6 126 506 625 1.88e-16 74.7
Msa1002310 MtrunA17_Chr1g0160521 58.000 50 21 0 1 50 6 55 2.54e-16 68.6
Msa1002310 MtrunA17_Chr4g0020081 32.353 136 88 2 6 139 676 809 4.04e-16 73.9
Msa1002310 MtrunA17_Chr3g0092301 37.795 127 66 5 6 126 95 214 4.05e-16 72.4
Msa1002310 MtrunA17_Chr2g0280751 35.556 135 74 3 6 134 691 818 4.13e-16 73.9
Msa1002310 MtrunA17_Chr1g0158141 55.556 54 23 1 76 128 13 66 4.50e-16 68.9
Msa1002310 MtrunA17_Chr8g0361141 35.915 142 77 5 6 141 681 814 7.66e-16 73.2
Msa1002310 MtrunA17_Chr4g0048581 36.567 134 72 3 6 133 696 822 8.37e-16 73.2
Msa1002310 MtrunA17_Chr5g0413291 36.975 119 68 4 2 116 463 578 8.79e-16 72.8
Msa1002310 MtrunA17_Chr8g0380681 31.008 129 80 2 6 127 484 610 8.86e-16 72.8
Msa1002310 MtrunA17_Chr8g0380681 31.746 126 79 3 6 126 1154 1277 1.28e-13 66.6
Msa1002310 MtrunA17_Chr4g0023071 35.821 134 70 8 1 126 651 776 9.37e-16 72.8
Msa1002310 MtrunA17_Chr2g0277731 33.333 132 76 5 6 127 480 609 9.73e-16 72.8
Msa1002310 MtrunA17_Chr3g0123891 39.167 120 57 5 5 115 450 562 1.42e-15 72.4
Msa1002310 MtrunA17_Chr8g0358821 34.646 127 70 5 6 126 851 970 1.71e-15 72.0
Msa1002310 MtrunA17_Chr8g0361161 35.211 142 78 6 6 141 209 342 1.86e-15 71.6
Msa1002310 MtrunA17_Chr5g0426941 38.971 136 75 5 6 136 504 636 1.96e-15 72.0
Msa1002310 MtrunA17_Chr0c03g0490031 35.246 122 66 4 2 116 458 573 2.08e-15 71.6
Msa1002310 MtrunA17_Chr8g0366971 30.667 150 81 4 6 138 238 381 2.25e-15 71.6
Msa1002310 MtrunA17_Chr2g0278831 36.975 119 69 3 2 116 454 570 4.86e-15 70.9
Msa1002310 MtrunA17_Chr7g0220741 35.484 124 63 5 2 116 463 578 5.11e-15 70.9
Msa1002310 MtrunA17_Chr2g0323301 35.821 134 70 7 1 126 653 778 6.06e-15 70.5
Msa1002310 MtrunA17_Chr6g0456231 35.246 122 66 4 2 116 461 576 6.89e-15 70.5
Msa1002310 MtrunA17_Chr4g0042381 37.008 127 68 5 6 126 618 738 8.19e-15 70.1
Msa1002310 MtrunA17_Chr2g0323341 32.308 130 80 4 1 126 566 691 8.49e-15 70.1
Msa1002310 MtrunA17_Chr3g0084631 37.008 127 67 5 6 126 28 147 9.92e-15 67.4
Msa1002310 MtrunA17_Chr4g0042391 36.220 127 69 5 6 126 618 738 9.94e-15 70.1
Msa1002310 MtrunA17_Chr5g0422921 40.157 127 63 6 6 126 663 782 1.08e-14 69.7
Msa1002310 MtrunA17_Chr4g0049581 33.803 142 64 6 6 136 513 635 1.16e-14 69.7
Msa1002310 MtrunA17_Chr2g0280731 34.783 138 77 4 6 137 715 845 1.29e-14 69.7
Msa1002310 MtrunA17_Chr8g0360201 34.507 142 79 5 6 141 571 704 1.54e-14 69.3
Msa1002310 MtrunA17_Chr4g0023111 33.813 139 86 4 6 141 879 1014 2.15e-14 68.9
Msa1002310 MtrunA17_Chr1g0200911 35.772 123 65 5 2 116 465 581 2.18e-14 68.9
Msa1002310 MtrunA17_Chr1g0205771 35.156 128 69 5 6 126 508 628 2.22e-14 68.9
Msa1002310 MtrunA17_Chr8g0358141 38.281 128 65 5 6 126 243 363 2.92e-14 68.6
Msa1002310 MtrunA17_Chr3g0084491 37.795 127 64 6 6 126 671 788 3.10e-14 68.6
Msa1002310 MtrunA17_Chr6g0474901 34.375 128 71 4 6 126 731 852 3.58e-14 68.2
Msa1002310 MtrunA17_Chr3g0084411 37.302 126 65 5 6 126 664 780 3.73e-14 68.2
Msa1002310 MtrunA17_Chr2g0312561 35.833 120 61 7 6 117 207 318 4.45e-14 67.8
Msa1002310 MtrunA17_Chr7g0274661 34.783 115 63 4 6 114 537 645 4.58e-14 68.2
Msa1002310 MtrunA17_Chr2g0278891 35.714 126 67 5 2 116 456 578 4.60e-14 67.8
Msa1002310 MtrunA17_Chr3g0084431 37.302 126 68 5 6 126 659 778 5.58e-14 67.8
Msa1002310 MtrunA17_Chr6g0475111 33.858 127 66 6 6 123 752 869 5.71e-14 67.8
Msa1002310 MtrunA17_Chr4g0023221 33.577 137 85 4 6 141 895 1026 6.18e-14 67.8
Msa1002310 MtrunA17_Chr2g0284101 34.146 123 64 5 2 115 459 573 7.35e-14 67.4
Msa1002310 MtrunA17_Chr7g0264461 36.066 122 63 5 6 119 267 381 7.54e-14 67.4
Msa1002310 MtrunA17_Chr3g0084661 35.417 144 79 7 6 141 198 335 7.65e-14 67.0
Msa1002310 MtrunA17_Chr3g0084421 38.095 126 64 6 6 126 627 743 7.72e-14 67.4
Msa1002310 MtrunA17_Chr8g0357991 35.659 129 71 4 6 128 650 772 8.37e-14 67.4
Msa1002310 MtrunA17_Chr4g0042351 37.008 127 68 5 6 126 618 738 9.82e-14 67.0
Msa1002310 MtrunA17_Chr8g0360591 37.719 114 63 4 6 115 208 317 9.98e-14 67.0
Msa1002310 MtrunA17_Chr3g0084691 39.370 127 62 7 6 126 687 804 1.01e-13 67.0
Msa1002310 MtrunA17_Chr1g0160921 35.000 140 81 6 6 138 215 351 1.02e-13 67.0
Msa1002310 MtrunA17_Chr8g0366931 30.282 142 85 4 6 139 188 323 1.02e-13 66.6
Msa1002310 MtrunA17_Chr3g0084441 38.583 127 63 6 6 126 671 788 1.09e-13 67.0
Msa1002310 MtrunA17_Chr1g0160741 57.778 45 19 0 1 45 41 85 1.15e-13 62.4
Msa1002310 MtrunA17_Chr8g0361281 36.923 130 68 5 6 128 678 800 1.18e-13 67.0
Msa1002310 MtrunA17_Chr8g0357961 36.220 127 69 4 6 126 649 769 1.26e-13 66.6
Msa1002310 MtrunA17_Chr2g0280681 37.589 141 79 5 6 141 666 802 1.28e-13 66.6
Msa1002310 MtrunA17_Chr6g0475091 33.594 128 72 4 6 126 746 867 1.51e-13 66.6
Msa1002310 MtrunA17_Chr1g0206361 34.884 129 68 6 6 126 508 628 1.64e-13 66.2
Msa1002310 MtrunA17_Chr8g0358071 38.281 128 65 5 6 126 641 761 1.64e-13 66.2
Msa1002310 MtrunA17_Chr8g0358101 38.281 128 65 5 6 126 629 749 1.86e-13 66.2
Msa1002310 MtrunA17_Chr8g0354271 34.375 128 77 4 6 129 500 624 1.96e-13 66.2
Msa1002310 MtrunA17_Chr1g0159611 31.496 127 76 5 6 127 406 526 2.01e-13 66.2
Msa1002310 MtrunA17_Chr5g0407721 29.496 139 89 5 1 135 526 659 2.10e-13 66.2
Msa1002310 MtrunA17_Chr8g0357651 34.028 144 75 4 6 139 635 768 2.24e-13 65.9
Msa1002310 MtrunA17_Chr8g0357691 37.405 131 62 4 6 126 643 763 2.35e-13 65.9
Msa1002310 MtrunA17_Chr6g0474991 32.812 128 73 4 6 126 28 149 2.56e-13 63.9
Msa1002310 MtrunA17_Chr3g0081031 35.385 130 72 4 6 129 517 640 2.68e-13 65.9
Msa1002310 MtrunA17_Chr1g0206261 34.959 123 76 3 6 126 253 373 2.79e-13 65.5
Msa1002310 MtrunA17_Chr6g0474861 33.594 128 72 4 6 126 451 572 2.81e-13 65.9
Msa1002310 MtrunA17_Chr6g0474871 33.594 128 72 4 6 126 730 851 3.06e-13 65.5
Msa1002310 MtrunA17_Chr2g0318201 39.000 100 47 5 34 125 1 94 3.28e-13 62.0
Msa1002310 MtrunA17_Chr8g0357631 34.028 144 75 4 6 139 633 766 3.67e-13 65.5
Msa1002310 MtrunA17_Chr7g0236551 37.398 123 73 3 6 126 653 773 3.74e-13 65.5
Msa1002310 MtrunA17_Chr8g0358081 37.500 128 66 5 6 126 626 746 3.76e-13 65.5
Msa1002310 MtrunA17_Chr3g0093161 36.923 130 67 6 6 128 662 783 3.82e-13 65.5
Msa1002310 MtrunA17_Chr7g0239371 35.200 125 64 6 6 123 502 616 3.85e-13 65.5
Msa1002310 MtrunA17_Chr5g0408941 36.283 113 65 4 6 114 260 369 3.98e-13 65.1
Msa1002310 MtrunA17_Chr7g0236471 36.585 123 74 3 6 126 505 625 4.30e-13 65.1
Msa1002310 MtrunA17_Chr8g0358061 38.281 128 65 5 6 126 221 341 4.48e-13 65.1
Msa1002310 MtrunA17_Chr3g0098781 38.095 126 67 7 6 126 76 195 4.64e-13 63.9
Msa1002310 MtrunA17_Chr1g0206551 36.232 138 74 5 6 135 200 331 4.66e-13 64.7
Msa1002310 MtrunA17_Chr3g0084451 38.583 127 63 6 6 126 671 788 5.11e-13 65.1
Msa1002310 MtrunA17_Chr8g0357981 36.719 128 67 5 6 126 470 590 5.98e-13 64.7
Msa1002310 MtrunA17_Chr4g0031601 33.607 122 73 5 6 123 266 383 6.01e-13 64.7
Msa1002310 MtrunA17_Chr2g0323231 35.659 129 71 6 6 128 343 465 6.08e-13 64.7
Msa1002310 MtrunA17_Chr2g0280831 34.677 124 74 5 6 126 260 379 6.21e-13 64.7
Msa1002310 MtrunA17_Chr4g0048801 35.606 132 66 5 6 128 683 804 6.33e-13 64.7
Msa1002310 MtrunA17_Chr2g0318831 35.433 127 70 4 6 126 667 787 6.50e-13 64.7
Msa1002310 MtrunA17_Chr4g0049601 36.800 125 59 6 6 123 521 632 6.69e-13 64.7
Msa1002310 MtrunA17_Chr6g0474811 33.594 128 72 4 6 126 738 859 6.76e-13 64.7
Msa1002310 MtrunA17_Chr2g0280781 33.858 127 72 4 6 126 675 795 7.02e-13 64.7
Msa1002310 MtrunA17_Chr2g0324471 33.099 142 77 5 6 139 533 664 7.09e-13 64.7
Msa1002310 MtrunA17_Chr2g0280791 34.677 124 74 5 6 126 686 805 7.17e-13 64.7
Msa1002310 MtrunA17_Chr8g0357881 36.090 133 65 4 6 128 641 763 7.64e-13 64.3
Msa1002310 MtrunA17_Chr6g0475201 31.206 141 84 4 6 139 739 873 7.72e-13 64.3
Msa1002310 MtrunA17_Chr1g0204331 30.714 140 73 5 5 125 430 564 7.89e-13 64.3
Msa1002310 MtrunA17_Chr2g0280801 34.677 124 74 5 6 126 692 811 8.22e-13 64.3
Msa1002310 MtrunA17_Chr8g0358121 34.646 127 71 5 6 126 627 747 8.23e-13 64.3
Msa1002310 MtrunA17_Chr3g0144481 34.921 126 68 4 6 122 251 371 8.46e-13 64.3
Msa1002310 MtrunA17_Chr6g0474661 32.394 142 73 4 5 133 544 675 1.14e-12 63.9
Msa1002310 MtrunA17_Chr2g0324171 34.483 116 74 1 6 121 509 622 1.25e-12 63.9
Msa1002310 MtrunA17_Chr8g0376131 33.566 143 80 6 6 139 216 352 1.29e-12 63.5
Msa1002310 MtrunA17_Chr8g0357761 33.333 144 76 4 6 139 645 778 1.29e-12 63.9
Msa1002310 MtrunA17_Chr8g0385051 35.652 115 69 3 4 115 436 548 1.30e-12 63.9
Msa1002310 MtrunA17_Chr2g0280701 34.043 141 79 5 6 139 665 798 1.33e-12 63.9
Msa1002310 MtrunA17_Chr5g0428581 31.852 135 87 3 6 137 209 341 1.35e-12 63.5
Msa1002310 MtrunA17_Chr8g0366991 29.008 131 80 3 2 125 629 753 1.36e-12 63.9
Msa1002310 MtrunA17_Chr1g0154371 34.375 128 69 5 6 126 521 640 1.36e-12 63.9
Msa1002310 MtrunA17_Chr7g0226891 32.824 131 74 5 2 126 209 331 1.38e-12 63.5
Msa1002310 MtrunA17_Chr1g0206351 33.803 142 85 5 6 141 518 656 1.38e-12 63.5
Msa1002310 MtrunA17_Chr3g0114851 34.307 137 61 6 5 115 682 815 1.65e-12 63.5
Msa1002310 MtrunA17_Chr6g0475131 32.031 128 74 4 6 126 174 295 1.73e-12 63.2
Msa1002310 MtrunA17_Chr4g0069251 37.069 116 59 4 6 114 343 451 1.85e-12 63.2
Msa1002310 MtrunA17_Chr8g0366981 30.000 150 82 4 6 138 464 607 2.24e-12 63.2
Msa1002310 MtrunA17_Chr3g0078551 40.625 128 61 7 6 126 689 808 2.77e-12 62.8
Msa1002310 MtrunA17_Chr2g0278861 32.520 123 69 5 2 116 450 566 3.05e-12 62.8
Msa1002310 MtrunA17_Chr8g0379931 37.008 127 66 5 6 125 871 990 3.21e-12 62.8
Msa1002310 MtrunA17_Chr3g0078541 38.095 126 67 5 6 126 695 814 3.24e-12 62.8
Msa1002310 MtrunA17_Chr3g0106141 32.800 125 70 5 2 114 671 793 3.44e-12 62.8
Msa1002310 MtrunA17_Chr8g0351221 29.412 153 77 5 5 138 544 684 3.65e-12 62.4
Msa1002310 MtrunA17_Chr8g0359691 38.596 114 62 5 6 115 828 937 3.77e-12 62.4
Msa1002310 MtrunA17_Chr5g0428101 36.508 126 69 5 6 126 666 785 4.93e-12 62.0
Msa1002310 MtrunA17_Chr8g0336581 33.043 115 66 4 6 114 249 358 5.23e-12 62.0
Msa1002310 MtrunA17_Chr3g0078521 38.095 126 67 5 6 126 684 803 5.34e-12 62.0
Msa1002310 MtrunA17_Chr2g0324931 34.959 123 59 6 1 114 854 964 5.38e-12 62.0
Msa1002310 MtrunA17_Chr7g0236531 35.772 123 75 3 6 126 203 323 5.46e-12 61.6
Msa1002310 MtrunA17_Chr3g0106131 33.600 125 69 5 2 114 668 790 5.68e-12 62.0
Msa1002310 MtrunA17_Chr4g0042341 34.921 126 71 5 6 126 688 807 6.48e-12 62.0
Msa1002310 MtrunA17_Chr3g0125281 32.283 127 64 5 6 121 572 687 6.53e-12 62.0
Msa1002310 MtrunA17_Chr1g0180951 32.824 131 69 6 6 124 262 385 7.23e-12 61.6
Msa1002310 MtrunA17_Chr4g0073471 31.356 118 76 3 2 116 452 567 7.53e-12 61.6
Msa1002310 MtrunA17_Chr1g0206321 28.947 114 70 3 20 126 8 117 9.00e-12 59.3
Msa1002310 MtrunA17_Chr4g0042361 37.008 127 67 7 6 126 704 823 1.04e-11 61.2
Msa1002310 MtrunA17_Chr8g0358031 36.719 128 67 5 6 126 644 764 1.10e-11 61.2
Msa1002310 MtrunA17_Chr8g0359651 34.615 130 59 6 6 122 831 947 1.12e-11 61.2
Msa1002310 MtrunA17_Chr7g0236231 35.537 121 72 4 6 124 683 799 1.19e-11 61.2
Msa1002310 MtrunA17_Chr2g0300711 31.579 133 72 4 6 128 248 371 1.25e-11 60.8
Msa1002310 MtrunA17_Chr3g0081011 34.351 131 72 4 6 129 504 627 1.27e-11 60.8
Msa1002310 MtrunA17_Chr3g0106181 33.333 126 70 5 1 114 214 337 1.34e-11 60.8
Msa1002310 MtrunA17_Chr7g0236341 34.426 122 77 2 6 126 683 802 1.44e-11 60.8
Msa1002310 MtrunA17_Chr8g0357711 32.639 144 77 4 6 139 642 775 1.52e-11 60.8
Msa1002310 MtrunA17_Chr8g0361431 37.795 127 66 7 6 126 649 768 1.55e-11 60.8
Msa1002310 MtrunA17_Chr3g0078531 38.095 126 67 6 6 126 692 811 1.64e-11 60.8
Msa1002310 MtrunA17_Chr3g0082941 34.109 129 75 4 6 129 338 461 1.73e-11 60.5
Msa1002310 MtrunA17_Chr6g0474851 32.812 128 73 4 6 126 93 214 1.73e-11 59.7
Msa1002310 MtrunA17_Chr8g0382101 34.167 120 63 5 5 115 447 559 1.80e-11 60.5
Msa1002310 MtrunA17_Chr3g0084681 34.921 126 72 5 6 126 629 749 1.80e-11 60.5
Msa1002310 MtrunA17_Chr3g0081001 35.000 140 83 5 6 141 508 643 1.89e-11 60.5
Msa1002310 MtrunA17_Chr1g0160751 55.814 43 19 0 84 126 3 45 1.91e-11 56.2
Msa1002310 MtrunA17_Chr1g0154311 30.303 132 87 3 6 135 516 644 2.03e-11 60.5
Msa1002310 MtrunA17_Chr8g0361341 37.324 142 76 6 6 141 3 137 2.15e-11 58.2
Msa1002310 MtrunA17_Chr8g0340111 35.246 122 75 2 6 125 670 789 2.22e-11 60.5
Msa1002310 MtrunA17_Chr8g0357661 31.944 144 78 4 6 139 28 161 2.23e-11 58.5
Msa1002310 MtrunA17_Chr1g0201241 27.820 133 80 5 1 126 882 1005 2.45e-11 60.1
Msa1002310 MtrunA17_Chr5g0443121 35.043 117 64 4 6 116 347 457 2.47e-11 60.1
Msa1002310 MtrunA17_Chr4g0072901 33.884 121 64 6 4 116 204 316 2.53e-11 60.1
Msa1002310 MtrunA17_Chr4g0055301 31.783 129 73 5 6 126 242 363 2.68e-11 59.7
Msa1002310 MtrunA17_Chr4g0048731 33.588 131 74 4 6 130 211 334 2.68e-11 59.7
Msa1002310 MtrunA17_Chr1g0196391 30.233 129 77 5 6 127 463 585 2.80e-11 60.1
Msa1002310 MtrunA17_Chr8g0354421 32.624 141 85 4 6 141 528 663 3.08e-11 59.7
Msa1002310 MtrunA17_Chr7g0259211 33.929 112 68 4 6 114 452 560 3.61e-11 59.7
Msa1002310 MtrunA17_Chr4g0055011 33.588 131 67 5 6 126 236 356 3.99e-11 59.3
Msa1002310 MtrunA17_Chr1g0150741 33.043 115 67 3 6 114 251 361 4.48e-11 59.3
Msa1002310 MtrunA17_Chr3g0145591 33.043 115 68 4 6 115 313 423 4.73e-11 59.3
Msa1002310 MtrunA17_Chr7g0239381 31.008 129 64 5 6 123 506 620 4.87e-11 59.3
Msa1002310 MtrunA17_Chr8g0357831 36.441 118 55 4 6 113 357 464 5.31e-11 59.3
Msa1002310 MtrunA17_Chr8g0340081 34.426 122 76 2 6 125 672 791 5.40e-11 59.3
Msa1002310 MtrunA17_Chr8g0340091 36.885 122 69 5 6 124 697 813 5.53e-11 59.3
Msa1002310 MtrunA17_Chr8g0361261 35.294 136 80 6 6 138 702 832 5.63e-11 59.3
Msa1002310 MtrunA17_Chr8g0340051 34.426 122 76 2 6 125 194 313 6.50e-11 58.5
Msa1002310 MtrunA17_Chr2g0318811 33.071 127 73 5 6 126 665 785 7.21e-11 58.9
Msa1002310 MtrunA17_Chr4g0048661 33.858 127 71 4 6 126 202 321 7.58e-11 58.5
Msa1002310 MtrunA17_Chr8g0340071 34.959 123 74 3 6 125 668 787 8.42e-11 58.5
Msa1002310 MtrunA17_Chr7g0236201 34.426 122 77 2 6 126 635 754 8.46e-11 58.5
Msa1002310 MtrunA17_Chr7g0236121 34.426 122 77 2 6 126 669 788 9.16e-11 58.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1002310 AT1G66980.4 53.425 146 62 3 1 140 945 1090 1.59e-46 161
Msa1002310 AT1G66980.1 53.425 146 62 3 1 140 962 1107 1.72e-46 161
Msa1002310 AT1G66980.2 53.425 146 62 3 1 140 991 1136 1.94e-46 160
Msa1002310 AT1G66980.3 53.425 146 62 3 1 140 989 1134 1.95e-46 160
Msa1002310 AT1G70250.1 54.861 144 54 5 1 136 617 757 1.45e-45 158
Msa1002310 AT5G38280.1 50.000 138 65 2 5 138 493 630 2.57e-44 154
Msa1002310 AT5G38280.2 50.000 138 65 2 5 138 493 630 3.05e-44 153
Msa1002310 AT5G38240.2 53.676 136 55 4 5 134 472 605 6.65e-44 152
Msa1002310 AT5G38250.1 54.074 135 56 4 5 134 469 602 1.74e-43 151
Msa1002310 AT4G18250.1 53.676 136 56 4 1 129 514 649 3.13e-43 150
Msa1002310 AT5G38240.3 53.285 137 56 4 4 134 425 559 2.27e-42 147
Msa1002310 AT5G39030.1 49.286 140 67 2 4 139 658 797 3.02e-42 149
Msa1002310 AT5G38240.1 53.285 137 56 4 4 134 489 623 3.36e-42 147
Msa1002310 AT5G39030.2 49.286 140 67 2 4 139 652 791 3.46e-42 148
Msa1002310 AT1G66910.2 50.355 141 65 3 4 139 505 645 1.07e-41 146
Msa1002310 AT1G66910.1 50.355 141 65 3 4 139 508 648 1.25e-41 146
Msa1002310 AT5G38260.1 50.714 140 65 3 4 139 481 620 2.78e-41 145
Msa1002310 AT1G67000.1 47.368 152 59 6 5 141 718 863 3.47e-41 145
Msa1002310 AT1G66920.3 51.938 129 60 1 4 130 442 570 3.54e-41 144
Msa1002310 AT1G66920.2 51.938 129 60 1 4 130 468 596 3.76e-41 144
Msa1002310 AT1G66920.1 51.938 129 60 1 4 130 460 588 4.28e-41 144
Msa1002310 AT1G66930.1 50.382 131 59 3 4 128 507 637 2.36e-40 142
Msa1002310 AT1G66930.3 50.382 131 59 3 4 128 476 606 2.93e-40 142
Msa1002310 AT5G39020.1 49.606 127 58 2 4 126 656 780 4.00e-40 142
Msa1002310 AT1G66930.2 50.382 131 59 3 4 128 716 846 6.44e-40 142
Msa1002310 AT1G34300.1 43.443 122 57 5 1 115 642 758 8.40e-24 96.3
Msa1002310 AT5G24080.2 40.945 127 65 6 5 126 693 814 1.24e-23 95.9
Msa1002310 AT4G32300.1 42.069 145 69 6 5 141 655 792 1.34e-23 95.9
Msa1002310 AT5G24080.3 40.945 127 65 6 5 126 566 687 1.57e-23 95.5
Msa1002310 AT5G24080.1 40.945 127 65 6 5 126 566 687 1.57e-23 95.5
Msa1002310 AT2G19130.1 37.778 135 73 5 1 130 652 780 1.98e-20 86.7
Msa1002310 AT4G00340.1 40.945 127 59 5 1 115 639 761 7.23e-20 85.1
Msa1002310 AT4G00340.2 40.945 127 59 5 1 115 618 740 8.02e-20 84.7
Msa1002310 AT5G20050.1 37.681 138 63 4 1 123 269 398 6.91e-19 82.0
Msa1002310 AT1G56130.2 36.585 123 73 3 6 126 856 975 4.23e-17 77.0
Msa1002310 AT1G56130.1 36.585 123 73 3 6 126 708 827 4.25e-17 77.0
Msa1002310 AT1G56130.3 36.585 123 73 3 6 126 657 776 4.39e-17 77.0
Msa1002310 AT1G56120.3 36.585 123 73 3 6 126 706 825 1.26e-16 75.9
Msa1002310 AT1G56120.1 36.585 123 73 3 6 126 872 991 1.26e-16 75.9
Msa1002310 AT1G56120.2 36.585 123 73 3 6 126 854 973 1.42e-16 75.5
Msa1002310 AT4G11460.1 36.290 124 74 3 6 126 513 634 4.60e-16 73.9
Msa1002310 AT4G11460.3 36.290 124 74 3 6 126 510 631 4.96e-16 73.9
Msa1002310 AT4G11460.2 36.290 124 74 3 6 126 435 556 5.33e-16 73.9
Msa1002310 AT4G23320.2 36.290 124 74 2 6 126 347 468 7.32e-16 73.6
Msa1002310 AT4G23320.1 36.290 124 74 2 6 126 347 468 7.32e-16 73.6
Msa1002310 AT4G23320.3 36.290 124 74 2 6 126 368 489 8.47e-16 73.2
Msa1002310 AT4G25390.1 35.766 137 83 3 5 137 513 648 1.22e-15 72.8
Msa1002310 AT2G23950.1 35.537 121 67 4 2 116 456 571 1.43e-15 72.8
Msa1002310 AT4G04540.1 38.710 124 71 3 6 129 517 635 1.50e-15 72.8
Msa1002310 AT4G04540.4 38.710 124 71 3 6 129 488 606 1.65e-15 72.4
Msa1002310 AT1G56140.1 34.146 123 76 3 6 126 855 974 2.84e-15 72.0
Msa1002310 AT5G51770.1 35.075 134 82 2 5 133 510 643 3.86e-15 71.6
Msa1002310 AT4G23140.1 38.095 126 68 4 6 126 515 635 6.16e-15 70.9
Msa1002310 AT1G70740.1 33.871 124 76 3 6 126 225 345 6.99e-15 70.5
Msa1002310 AT4G33430.2 34.959 123 66 5 2 116 497 613 7.98e-15 70.5
Msa1002310 AT4G23160.1 38.060 134 74 5 6 133 523 653 9.44e-15 70.5
Msa1002310 AT3G16030.1 35.507 138 75 5 6 134 691 823 9.51e-15 70.5
Msa1002310 AT5G65240.2 38.462 117 62 4 5 115 448 560 1.14e-14 70.1
Msa1002310 AT3G16030.2 35.507 138 75 5 6 134 568 700 1.14e-14 70.1
Msa1002310 AT5G55830.1 33.594 128 79 4 6 129 531 656 1.26e-14 70.1
Msa1002310 AT3G16030.6 35.507 138 75 5 6 134 712 844 1.34e-14 70.1
Msa1002310 AT5G65240.1 38.462 117 62 4 5 115 448 560 1.63e-14 69.7
Msa1002310 AT5G16000.1 32.500 120 74 2 2 116 469 586 1.75e-14 69.7
Msa1002310 AT4G38830.1 32.593 135 83 4 6 135 509 640 1.82e-14 69.7
Msa1002310 AT4G33430.1 34.959 123 66 5 2 116 450 566 2.20e-14 69.3
Msa1002310 AT4G23150.1 37.405 131 62 4 6 126 500 620 2.24e-14 69.3
Msa1002310 AT4G11480.3 35.484 124 75 3 6 126 488 609 2.26e-14 69.3
Msa1002310 AT4G23250.1 34.091 132 66 3 6 126 523 644 2.32e-14 69.3
Msa1002310 AT4G30520.1 34.711 121 68 4 2 116 460 575 2.35e-14 69.3
Msa1002310 AT4G11480.4 35.484 124 75 3 6 126 485 606 2.42e-14 69.3
Msa1002310 AT4G11480.1 35.484 124 75 3 6 126 493 614 2.45e-14 69.3
Msa1002310 AT3G14840.2 38.596 114 64 4 6 116 836 946 2.50e-14 69.3
Msa1002310 AT1G67520.8 34.483 145 79 6 6 140 452 590 2.56e-14 68.9
Msa1002310 AT1G67520.7 34.483 145 79 6 6 140 452 590 2.56e-14 68.9
Msa1002310 AT1G67520.5 34.483 145 79 6 6 140 423 561 3.03e-14 68.9
Msa1002310 AT4G23290.1 35.821 134 81 3 6 136 484 615 3.08e-14 68.9
Msa1002310 AT4G11470.1 34.677 124 76 3 6 126 503 624 3.24e-14 68.9
Msa1002310 AT4G23290.2 35.821 134 81 3 6 136 527 658 3.32e-14 68.9
Msa1002310 AT4G11470.2 34.677 124 76 3 6 126 508 629 3.34e-14 68.9
Msa1002310 AT4G29050.2 34.746 118 71 3 2 115 517 632 3.65e-14 68.6
Msa1002310 AT1G70740.2 33.088 136 73 4 6 126 213 345 3.87e-14 68.6
Msa1002310 AT4G29050.1 34.746 118 71 3 2 115 503 618 4.01e-14 68.6
Msa1002310 AT4G11490.1 29.577 142 79 3 6 136 485 616 4.39e-14 68.6
Msa1002310 AT1G67520.3 34.483 145 79 6 6 140 660 798 4.58e-14 68.6
Msa1002310 AT1G67520.4 34.483 145 79 6 6 140 617 755 4.59e-14 68.6
Msa1002310 AT1G67520.6 34.483 145 79 6 6 140 667 805 4.86e-14 68.2
Msa1002310 AT5G35370.1 34.559 136 62 6 5 117 676 807 4.88e-14 68.2
Msa1002310 AT1G60800.2 34.677 124 64 3 2 116 395 510 5.81e-14 68.2
Msa1002310 AT1G77280.2 33.571 140 81 4 2 134 564 698 6.00e-14 68.2
Msa1002310 AT1G77280.1 33.571 140 81 4 2 134 564 698 6.00e-14 68.2
Msa1002310 AT4G23250.3 34.091 132 66 3 6 126 518 639 6.26e-14 68.2
Msa1002310 AT4G23250.2 34.091 132 66 3 6 126 518 639 6.87e-14 67.8
Msa1002310 AT4G23210.3 34.375 128 76 3 2 126 518 640 7.60e-14 67.8
Msa1002310 AT1G60800.1 34.677 124 64 3 2 116 462 577 8.22e-14 67.8
Msa1002310 AT4G23260.2 33.333 132 67 3 6 126 492 613 8.57e-14 67.8
Msa1002310 AT4G23260.1 33.333 132 67 3 6 126 503 624 9.84e-14 67.4
Msa1002310 AT3G25560.3 33.884 121 69 4 2 116 469 584 1.17e-13 67.4
Msa1002310 AT4G23140.2 37.398 123 67 4 9 126 524 641 1.27e-13 67.0
Msa1002310 AT3G46760.1 40.000 135 66 6 6 132 203 330 1.34e-13 66.6
Msa1002310 AT3G25560.2 33.884 121 69 4 2 116 470 585 1.47e-13 67.0
Msa1002310 AT3G25560.1 33.884 121 69 4 2 116 469 584 1.50e-13 67.0
Msa1002310 AT1G21590.2 31.496 127 73 4 2 121 529 648 1.99e-13 66.6
Msa1002310 AT1G21590.1 31.496 127 73 4 2 121 569 688 2.09e-13 66.6
Msa1002310 AT4G23200.1 34.921 126 73 3 6 126 500 621 2.54e-13 66.2
Msa1002310 AT4G28670.1 34.091 132 73 4 2 126 494 618 2.67e-13 66.2
Msa1002310 AT4G23240.1 33.582 134 84 2 6 136 499 630 2.93e-13 66.2
Msa1002310 AT5G60270.1 32.540 126 77 4 2 124 502 622 3.11e-13 65.9
Msa1002310 AT4G23240.2 33.582 134 84 2 6 136 192 323 3.28e-13 65.5
Msa1002310 AT4G21390.1 33.088 136 76 4 6 134 693 820 3.33e-13 65.9
Msa1002310 AT4G04570.1 34.677 124 76 2 6 129 512 630 3.55e-13 65.9
Msa1002310 AT1G70520.1 32.061 131 75 5 6 126 488 614 4.14e-13 65.5
Msa1002310 AT1G11350.1 34.228 149 81 6 6 141 676 820 5.03e-13 65.5
Msa1002310 AT4G11900.9 34.848 132 71 6 6 130 632 755 6.12e-13 65.1
Msa1002310 AT4G11900.1 34.848 132 71 6 6 130 701 824 6.24e-13 65.1
Msa1002310 AT5G10290.1 38.136 118 61 5 5 115 454 566 6.28e-13 65.1
Msa1002310 AT5G10290.2 38.136 118 61 5 5 115 454 566 6.28e-13 65.1
Msa1002310 AT1G70530.1 31.008 129 80 6 6 131 486 608 6.64e-13 65.1
Msa1002310 AT3G15890.1 33.333 138 80 6 4 134 202 334 7.60e-13 64.7
Msa1002310 AT1G11050.1 31.159 138 82 5 6 132 464 599 7.79e-13 64.7
Msa1002310 AT4G23130.1 33.333 126 75 3 6 126 504 625 8.40e-13 64.7
Msa1002310 AT4G23180.1 32.836 134 78 3 6 133 512 639 9.45e-13 64.7
Msa1002310 AT1G56145.1 33.333 123 77 3 6 126 849 968 1.43e-12 64.3
Msa1002310 AT1G11340.1 35.385 130 79 3 6 133 679 805 1.64e-12 63.9
Msa1002310 AT1G56145.2 33.333 123 77 3 6 126 876 995 1.64e-12 63.9
Msa1002310 AT1G56145.3 33.333 123 77 3 6 126 746 865 1.68e-12 63.9
Msa1002310 AT2G13800.4 34.146 123 67 6 2 116 319 435 1.83e-12 63.5
Msa1002310 AT2G13800.2 34.146 123 67 6 2 116 319 435 1.83e-12 63.5
Msa1002310 AT2G13800.3 34.146 123 67 6 2 116 436 552 2.09e-12 63.5
Msa1002310 AT2G13800.1 34.146 123 67 6 2 116 436 552 2.09e-12 63.5
Msa1002310 AT4G11530.1 31.884 138 89 3 6 140 516 651 2.28e-12 63.5
Msa1002310 AT3G45860.1 31.008 129 75 4 6 126 515 637 2.49e-12 63.5
Msa1002310 AT2G13790.1 34.146 123 67 6 2 116 455 571 2.60e-12 63.2
Msa1002310 AT1G07650.1 32.812 128 80 4 6 130 843 967 4.46e-12 62.8
Msa1002310 AT1G07650.2 32.812 128 80 4 6 130 849 973 4.73e-12 62.8
Msa1002310 AT5G63710.3 36.842 114 67 3 5 115 454 565 4.96e-12 62.4
Msa1002310 AT1G07650.4 32.812 128 80 4 6 130 630 754 4.99e-12 62.4
Msa1002310 AT1G07650.3 32.812 128 80 4 6 130 817 941 5.00e-12 62.8
Msa1002310 AT5G63710.1 36.842 114 67 3 5 115 453 564 5.06e-12 62.4
Msa1002310 AT4G23130.2 33.333 126 75 3 6 126 508 629 5.74e-12 62.4
Msa1002310 AT5G63710.2 36.842 114 67 3 5 115 418 529 6.76e-12 62.0
Msa1002310 AT5G63710.4 36.842 114 67 3 5 115 418 529 6.76e-12 62.0
Msa1002310 AT1G70130.1 35.043 117 70 3 2 115 493 606 7.44e-12 62.0
Msa1002310 AT4G23310.1 33.071 127 74 4 6 126 672 793 7.88e-12 62.0
Msa1002310 AT3G24550.1 33.333 120 70 5 6 118 442 558 8.26e-12 62.0
Msa1002310 AT2G48010.1 33.846 130 71 6 6 127 450 572 8.44e-12 62.0
Msa1002310 AT1G16670.1 36.842 114 64 6 6 115 207 316 8.84e-12 61.6
Msa1002310 AT4G23310.2 33.071 127 74 4 6 126 632 753 9.06e-12 62.0
Msa1002310 AT4G04500.1 34.043 141 77 6 6 135 509 644 9.27e-12 61.6
Msa1002310 AT4G21400.7 29.921 127 84 3 6 129 517 641 1.33e-11 61.2
Msa1002310 AT5G07620.1 32.743 113 66 4 9 114 245 354 1.51e-11 60.8
Msa1002310 AT4G28490.1 33.898 118 67 5 1 114 855 965 1.56e-11 61.2
Msa1002310 AT4G23280.3 32.283 127 75 3 6 126 458 579 1.67e-11 60.8
Msa1002310 AT2G39660.1 31.159 138 81 5 6 137 241 370 1.84e-11 60.8
Msa1002310 AT4G23280.2 32.283 127 75 3 6 126 506 627 1.92e-11 60.8
Msa1002310 AT5G18910.1 32.000 125 73 5 1 121 349 465 1.97e-11 60.8
Msa1002310 AT3G24540.1 31.967 122 69 4 6 118 345 461 1.98e-11 60.8
Msa1002310 AT4G23280.1 32.283 127 75 3 6 126 508 629 2.05e-11 60.8
Msa1002310 AT1G11330.1 36.000 125 72 5 6 126 686 806 2.20e-11 60.8
Msa1002310 AT1G11330.2 36.000 125 72 5 6 126 688 808 2.20e-11 60.8
Msa1002310 AT5G25930.1 37.288 118 62 6 1 113 854 964 2.41e-11 60.5
Msa1002310 AT1G61590.1 35.398 113 66 4 6 114 268 377 2.88e-11 60.1
Msa1002310 AT1G61610.1 34.646 127 78 3 6 130 689 812 2.99e-11 60.5
Msa1002310 AT1G61430.11 32.576 132 80 6 6 133 630 756 3.36e-11 60.1
Msa1002310 AT1G61430.12 32.576 132 80 6 6 133 630 756 3.36e-11 60.1
Msa1002310 AT1G61430.13 32.576 132 80 6 6 133 630 756 3.36e-11 60.1
Msa1002310 AT1G61430.1 32.576 132 80 6 6 133 656 782 3.64e-11 60.1
Msa1002310 AT1G61430.9 32.576 132 80 6 6 133 653 779 3.75e-11 60.1
Msa1002310 AT1G29740.2 33.628 113 66 3 6 113 839 947 4.02e-11 60.1
Msa1002310 AT1G29740.1 33.628 113 66 3 6 113 839 947 5.15e-11 59.7
Msa1002310 AT4G21400.8 29.921 127 84 3 6 129 416 540 7.17e-11 59.3
Msa1002310 AT4G21400.2 29.921 127 84 3 6 129 515 639 7.48e-11 59.3
Msa1002310 AT4G21400.1 29.921 127 84 3 6 129 527 651 7.80e-11 58.9

Find 30 sgRNAs with CRISPR-Local

Find 30 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTTCACGAAATTGACGATTT+TGG 0.213243 6_4:+87921988 None:intergenic
CTCATTGCAGGTCTATCATT+TGG 0.325817 6_4:+87922096 None:intergenic
GAATGACCATAGTAGGATTA+TGG 0.362649 6_4:-87922134 Msa1002310:CDS
GTGAGAAATACTTTCCTGAT+TGG 0.366334 6_4:-87922233 Msa1002310:CDS
TCAATAACTCTACTCATTGC+AGG 0.376701 6_4:+87922084 None:intergenic
GGGAGAAGAAAGAATAGGTT+TGG 0.383588 6_4:+87922023 None:intergenic
AGAAGGCAATATGAATTCAT+TGG 0.389332 6_4:-87922055 Msa1002310:CDS
AGAGTTATTGAAATGTTAGA+AGG 0.390034 6_4:-87922072 Msa1002310:CDS
GAAAGCATTATTTCGATGTC+AGG 0.410884 6_4:-87922408 None:intergenic
TGAGAAATACTTTCCTGATT+GGG 0.423702 6_4:-87922232 Msa1002310:CDS
AAGTCTGATGTTTATAGTTA+CGG 0.438748 6_4:-87922318 Msa1002310:CDS
TAGTTACGGAATGATGTTGT+TGG 0.441637 6_4:-87922304 Msa1002310:CDS
GCAAAGAGAATGACCATAGT+AGG 0.455735 6_4:-87922141 Msa1002310:CDS
TTCCTGATTGGGTATACAAA+AGG 0.458665 6_4:-87922221 Msa1002310:CDS
AATGCACCATAATCCTACTA+TGG 0.476373 6_4:+87922128 None:intergenic
CTCACTTGTATGACTTGCAT+TGG 0.490693 6_4:+87922251 None:intergenic
GGAGAAGAAAGAATAGGTTT+GGG 0.520827 6_4:+87922024 None:intergenic
TCAGGTGCTAGAGGAACAAT+GGG 0.529469 6_4:-87922390 Msa1002310:CDS
GAGTTGTGGAATAGAAACTT+TGG 0.533531 6_4:-87922354 Msa1002310:CDS
CTAGTGGGAGAAGAAAGAAT+AGG 0.536965 6_4:+87922018 None:intergenic
GTCAGGTGCTAGAGGAACAA+TGG 0.547536 6_4:-87922391 Msa1002310:CDS
TGTTGGAAATGATCGGAGGA+AGG 0.571561 6_4:-87922287 Msa1002310:CDS
AAGTTTCTATTCCACAACTC+AGG 0.577032 6_4:+87922357 None:intergenic
CTTTGCGATATCATCTTCTG+TGG 0.580639 6_4:+87922158 None:intergenic
TTGTGGAATAGAAACTTTGG+AGG 0.585820 6_4:-87922351 Msa1002310:CDS
ATTTCGATGTCAGGTGCTAG+AGG 0.597080 6_4:-87922399 None:intergenic
GAAGAAAGAATAGGTTTGGG+TGG 0.618415 6_4:+87922027 None:intergenic
GATATGTAGCTCCTGAGTTG+TGG 0.623997 6_4:-87922368 Msa1002310:CDS
ATGATGTTGTTGGAAATGAT+CGG 0.697304 6_4:-87922294 Msa1002310:CDS
ATGTTGTTGGAAATGATCGG+AGG 0.743274 6_4:-87922291 Msa1002310:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
! AAGTCTGATGTTTATAGTTA+CGG - chr6_4:87922065-87922084 Msa1002310:CDS 25.0%
! AGAGTTATTGAAATGTTAGA+AGG - chr6_4:87922311-87922330 Msa1002310:CDS 25.0%
ATGATGTTGTTGGAAATGAT+CGG - chr6_4:87922089-87922108 Msa1002310:CDS 30.0%
TGAGAAATACTTTCCTGATT+GGG - chr6_4:87922151-87922170 Msa1002310:CDS 30.0%
AGAAGGCAATATGAATTCAT+TGG - chr6_4:87922328-87922347 Msa1002310:CDS 30.0%
AAGTTTCTATTCCACAACTC+AGG + chr6_4:87922029-87922048 None:intergenic 35.0%
GAGTTGTGGAATAGAAACTT+TGG - chr6_4:87922029-87922048 Msa1002310:CDS 35.0%
TTGTGGAATAGAAACTTTGG+AGG - chr6_4:87922032-87922051 Msa1002310:CDS 35.0%
TAGTTACGGAATGATGTTGT+TGG - chr6_4:87922079-87922098 Msa1002310:CDS 35.0%
GTGAGAAATACTTTCCTGAT+TGG - chr6_4:87922150-87922169 Msa1002310:CDS 35.0%
TTCCTGATTGGGTATACAAA+AGG - chr6_4:87922162-87922181 Msa1002310:CDS 35.0%
! AACCTTTTGTATACCCAATC+AGG + chr6_4:87922167-87922186 None:intergenic 35.0%
GAATGACCATAGTAGGATTA+TGG - chr6_4:87922249-87922268 Msa1002310:CDS 35.0%
AATGCACCATAATCCTACTA+TGG + chr6_4:87922258-87922277 None:intergenic 35.0%
TCAATAACTCTACTCATTGC+AGG + chr6_4:87922302-87922321 None:intergenic 35.0%
GGAGAAGAAAGAATAGGTTT+GGG + chr6_4:87922362-87922381 None:intergenic 35.0%
!!! GATTTTGGTAGTGATCTAGT+GGG + chr6_4:87922383-87922402 None:intergenic 35.0%
ATGTTGTTGGAAATGATCGG+AGG - chr6_4:87922092-87922111 Msa1002310:CDS 40.0%
! CTCACTTGTATGACTTGCAT+TGG + chr6_4:87922135-87922154 None:intergenic 40.0%
CTTTGCGATATCATCTTCTG+TGG + chr6_4:87922228-87922247 None:intergenic 40.0%
GCAAAGAGAATGACCATAGT+AGG - chr6_4:87922242-87922261 Msa1002310:CDS 40.0%
CTCATTGCAGGTCTATCATT+TGG + chr6_4:87922290-87922309 None:intergenic 40.0%
GAAGAAAGAATAGGTTTGGG+TGG + chr6_4:87922359-87922378 None:intergenic 40.0%
GGGAGAAGAAAGAATAGGTT+TGG + chr6_4:87922363-87922382 None:intergenic 40.0%
CTAGTGGGAGAAGAAAGAAT+AGG + chr6_4:87922368-87922387 None:intergenic 40.0%
!!! CGATTTTGGTAGTGATCTAG+TGG + chr6_4:87922384-87922403 None:intergenic 40.0%
TCAGGTGCTAGAGGAACAAT+GGG - chr6_4:87921993-87922012 Msa1002310:CDS 45.0%
GATATGTAGCTCCTGAGTTG+TGG - chr6_4:87922015-87922034 Msa1002310:CDS 45.0%
TGTTGGAAATGATCGGAGGA+AGG - chr6_4:87922096-87922115 Msa1002310:CDS 45.0%
GTCAGGTGCTAGAGGAACAA+TGG - chr6_4:87921992-87922011 Msa1002310:CDS 50.0%
Chromosome Type Strat End Strand Name
chr6_4 gene 87921990 87922415 87921990 ID=Msa1002310;Name=Msa1002310
chr6_4 mRNA 87921990 87922415 87921990 ID=Msa1002310-mRNA-1;Parent=Msa1002310;Name=Msa1002310-mRNA-1;_AED=0.44;_eAED=0.44;_QI=0|-1|0|1|-1|1|1|0|141
chr6_4 exon 87921990 87922415 87921990 ID=Msa1002310-mRNA-1:exon:17145;Parent=Msa1002310-mRNA-1
chr6_4 CDS 87921990 87922415 87921990 ID=Msa1002310-mRNA-1:cds;Parent=Msa1002310-mRNA-1
Gene Sequence

>Msa1002310

ATGTCAGGTGCTAGAGGAACAATGGGATATGTAGCTCCTGAGTTGTGGAATAGAAACTTTGGAGGCGTTTCGTACAAGTCTGATGTTTATAGTTACGGAATGATGTTGTTGGAAATGATCGGAGGAAGGAAAAACATTAGTGCCAATGCAAGTCATACAAGTGAGAAATACTTTCCTGATTGGGTATACAAAAGGTTTGATCTAGACACTGATCTGAGACACGACGAAGTGATTGCCACAGAAGATGATATCGCAAAGAGAATGACCATAGTAGGATTATGGTGCATTCAAACACTTCCAAATGATAGACCTGCAATGAGTAGAGTTATTGAAATGTTAGAAGGCAATATGAATTCATTGGAAATACCACCCAAACCTATTCTTTCTTCTCCCACTAGATCACTACCAAAATCGTCAATTTCGTGA
Protein sequence

>Msa1002310

MSGARGTMGYVAPELWNRNFGGVSYKSDVYSYGMMLLEMIGGRKNISANASHTSEKYFPDWVYKRFDLDTDLRHDEVIATEDDIAKRMTIVGLWCIQTLPNDRPAMSRVIEMLEGNMNSLEIPPKPILSSPTRSLPKSSIS*