Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0423020 | AES72175.1 | 79.626 | 481 | 35 | 3 | 1 | 454 | 1 | 445 | 0.0 | 759 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0423020 | sp|F4JFU8|OBL1_ARATH | 36.546 | 498 | 262 | 6 | 5 | 448 | 11 | 508 | 3.39e-107 | 330 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0423020 | G7J382 | 79.626 | 481 | 35 | 3 | 1 | 454 | 1 | 445 | 0.0 | 759 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0123810 | Msa0423020 | 0.816671 | 4.904454e-52 | -8.615850e-47 |
| Msa0192970 | Msa0423020 | 0.813420 | 2.582884e-51 | -8.615850e-47 |
| Msa0231000 | Msa0423020 | 0.824745 | 6.834087e-54 | -8.615850e-47 |
| Msa0232850 | Msa0423020 | 0.812752 | 3.619943e-51 | -8.615850e-47 |
| Msa0365500 | Msa0423020 | 0.828701 | 7.768644e-55 | -8.615850e-47 |
| Msa0373890 | Msa0423020 | 0.800237 | 1.583719e-48 | -8.615850e-47 |
| Msa0384800 | Msa0423020 | 0.830439 | 2.935722e-55 | -8.615850e-47 |
| Msa0406120 | Msa0423020 | 0.808734 | 2.677882e-50 | -8.615850e-47 |
| Msa0414410 | Msa0423020 | 0.800994 | 1.109846e-48 | -8.615850e-47 |
| Msa0423020 | Msa0431690 | 0.834189 | 3.461001e-56 | -8.615850e-47 |
| Msa0423020 | Msa0435230 | 0.830158 | 3.438619e-55 | -8.615850e-47 |
| Msa0423020 | Msa0452620 | 0.809633 | 1.718148e-50 | -8.615850e-47 |
| Msa0423020 | Msa0452900 | 0.825365 | 4.877098e-54 | -8.615850e-47 |
| Msa0423020 | Msa0453120 | 0.800362 | 1.493796e-48 | -8.615850e-47 |
| Msa0423020 | Msa0454910 | 0.812415 | 4.289381e-51 | -8.615850e-47 |
| Msa0423020 | Msa0479340 | 0.809723 | 1.643377e-50 | -8.615850e-47 |
| Msa0423020 | Msa0514900 | 0.851788 | 7.066042e-61 | -8.615850e-47 |
| Msa0423020 | Msa0590120 | 0.813520 | 2.455339e-51 | -8.615850e-47 |
| Msa0423020 | Msa0639610 | 0.800787 | 1.223579e-48 | -8.615850e-47 |
| Msa0423020 | Msa0678930 | 0.800310 | 1.530464e-48 | -8.615850e-47 |
| Msa0423020 | Msa0725850 | 0.811503 | 6.777864e-51 | -8.615850e-47 |
| Msa0423020 | Msa0726140 | 0.829540 | 4.862001e-55 | -8.615850e-47 |
| Msa0423020 | Msa0743810 | 0.825439 | 4.683695e-54 | -8.615850e-47 |
| Msa0423020 | Msa0745060 | 0.842009 | 3.357823e-58 | -8.615850e-47 |
| Msa0423020 | Msa0767720 | 0.810906 | 9.132689e-51 | -8.615850e-47 |
| Msa0423020 | Msa0783160 | 0.838992 | 2.068433e-57 | -8.615850e-47 |
| Msa0423020 | Msa0784290 | 0.800427 | 1.448734e-48 | -8.615850e-47 |
| Msa0423020 | Msa0787600 | 0.805936 | 1.049097e-49 | -8.615850e-47 |
| Msa0423020 | Msa0811080 | 0.808228 | 3.434013e-50 | -8.615850e-47 |
| Msa0423020 | Msa0825860 | 0.833002 | 6.846843e-56 | -8.615850e-47 |
| Msa0423020 | Msa0865320 | 0.816729 | 4.760293e-52 | -8.615850e-47 |
| Msa0423020 | Msa0885280 | 0.804181 | 2.443109e-49 | -8.615850e-47 |
| Msa0423020 | Msa0885290 | 0.824302 | 8.689555e-54 | -8.615850e-47 |
| Msa0423020 | Msa0898380 | 0.810437 | 1.153387e-50 | -8.615850e-47 |
| Msa0423020 | Msa0954910 | 0.815918 | 7.226431e-52 | -8.615850e-47 |
| Msa0423020 | Msa0957860 | 0.812250 | 4.660914e-51 | -8.615850e-47 |
| Msa0423020 | Msa0957960 | 0.812891 | 3.373739e-51 | -8.615850e-47 |
| Msa0423020 | Msa1002310 | 0.806301 | 8.789984e-50 | -8.615850e-47 |
| Msa0423020 | Msa1024240 | 0.804494 | 2.103066e-49 | -8.615850e-47 |
| Msa0423020 | Msa1025360 | 0.812523 | 4.061771e-51 | -8.615850e-47 |
| Msa0423020 | Msa1025370 | 0.810294 | 1.238393e-50 | -8.615850e-47 |
| Msa0423020 | Msa1044830 | 0.801652 | 8.138597e-49 | -8.615850e-47 |
| Msa0423020 | Msa1044840 | 0.812376 | 4.373953e-51 | -8.615850e-47 |
| Msa0423020 | Msa1057920 | 0.817482 | 3.222415e-52 | -8.615850e-47 |
| Msa0423020 | Msa1092990 | 0.843503 | 1.346098e-58 | -8.615850e-47 |
| Msa0423020 | Msa1100980 | 0.853171 | 2.849359e-61 | -8.615850e-47 |
| Msa0423020 | Msa1135740 | 0.833345 | 5.626625e-56 | -8.615850e-47 |
| Msa0423020 | Msa1136090 | 0.856071 | 4.121052e-62 | -8.615850e-47 |
| Msa0423020 | Msa1146110 | 0.822658 | 2.105483e-53 | -8.615850e-47 |
| Msa0423020 | Msa1173920 | 0.848771 | 4.955611e-60 | -8.615850e-47 |
| Msa0423020 | Msa1178340 | 0.806559 | 7.757725e-50 | -8.615850e-47 |
| Msa0423020 | Msa1187940 | 0.847381 | 1.198537e-59 | -8.615850e-47 |
| Msa0423020 | Msa1187950 | 0.832408 | 9.617976e-56 | -8.615850e-47 |
| Msa0423020 | Msa1192640 | 0.842782 | 2.095039e-58 | -8.615850e-47 |
| Msa0423020 | Msa1269670 | 0.836169 | 1.095061e-56 | -8.615850e-47 |
| Msa0423020 | Msa1270230 | 0.835886 | 1.292620e-56 | -8.615850e-47 |
| Msa0423020 | Msa1270240 | 0.819987 | 8.702651e-53 | -8.615850e-47 |
| Msa0423020 | Msa1270270 | 0.809555 | 1.785440e-50 | -8.615850e-47 |
| Msa0423020 | Msa1273230 | 0.801578 | 8.427751e-49 | -8.615850e-47 |
| Msa0423020 | Msa1283330 | 0.830359 | 3.070443e-55 | -8.615850e-47 |
| Msa0423020 | Msa1285930 | 0.866278 | 3.204092e-65 | -8.615850e-47 |
| Msa0423020 | Msa1287800 | 0.800454 | 1.430230e-48 | -8.615850e-47 |
| Msa0423020 | Msa1287810 | 0.815653 | 8.280259e-52 | -8.615850e-47 |
| Msa0423020 | Msa1321560 | 0.804372 | 2.229290e-49 | -8.615850e-47 |
| Msa0423020 | Msa1336280 | 0.806194 | 9.257829e-50 | -8.615850e-47 |
| Msa0423020 | Msa1342200 | 0.826937 | 2.062602e-54 | -8.615850e-47 |
| Msa0423020 | Msa1382690 | 0.800001 | 1.768448e-48 | -8.615850e-47 |
| Msa0423020 | Msa1386330 | 0.841025 | 6.102888e-58 | -8.615850e-47 |
| Msa0423020 | Msa1404000 | 0.844891 | 5.708091e-59 | -8.615850e-47 |
| Msa0423020 | Msa1415310 | 0.813834 | 2.094082e-51 | -8.615850e-47 |
| Msa0423020 | Msa1422180 | 0.810132 | 1.341619e-50 | -8.615850e-47 |
| Msa0267000 | Msa0423020 | 0.800569 | 1.355448e-48 | -8.615850e-47 |
| Msa0267010 | Msa0423020 | 0.804492 | 2.105032e-49 | -8.615850e-47 |
| Msa0270520 | Msa0423020 | 0.839102 | 1.937112e-57 | -8.615850e-47 |
| Msa0313760 | Msa0423020 | 0.803912 | 2.779098e-49 | -8.615850e-47 |
| Msa0344910 | Msa0423020 | 0.807545 | 4.797394e-50 | -8.615850e-47 |
| Msa0344980 | Msa0423020 | 0.809181 | 2.148708e-50 | -8.615850e-47 |
| Msa0360510 | Msa0423020 | 0.811017 | 8.638439e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0423020 | MtrunA17_Chr3g0123741 | 85.714 | 287 | 21 | 1 | 168 | 454 | 37 | 303 | 0.0 | 509 |
| Msa0423020 | MtrunA17_Chr5g0402171 | 50.968 | 465 | 210 | 5 | 1 | 450 | 1 | 462 | 1.58e-161 | 464 |
| Msa0423020 | MtrunA17_Chr1g0153271 | 47.682 | 453 | 218 | 6 | 13 | 450 | 11 | 459 | 3.25e-141 | 412 |
| Msa0423020 | MtrunA17_Chr7g0276561 | 36.992 | 492 | 258 | 7 | 13 | 455 | 8 | 496 | 2.01e-103 | 317 |
| Msa0423020 | MtrunA17_Chr3g0123751 | 64.655 | 116 | 14 | 1 | 71 | 159 | 27 | 142 | 6.60e-39 | 139 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0423020 | AT5G67050.1 | 47.854 | 466 | 220 | 9 | 1 | 447 | 1 | 462 | 4.52e-143 | 418 |
| Msa0423020 | AT5G42930.1 | 45.682 | 440 | 217 | 5 | 31 | 450 | 24 | 461 | 1.83e-135 | 398 |
| Msa0423020 | AT1G56630.1 | 41.860 | 473 | 241 | 9 | 13 | 454 | 7 | 476 | 1.44e-121 | 363 |
| Msa0423020 | AT1G45201.1 | 45.499 | 411 | 202 | 6 | 57 | 450 | 57 | 462 | 8.46e-120 | 358 |
| Msa0423020 | AT1G45201.3 | 45.499 | 411 | 202 | 6 | 57 | 450 | 82 | 487 | 1.38e-119 | 359 |
| Msa0423020 | AT3G14360.1 | 36.546 | 498 | 262 | 6 | 5 | 448 | 11 | 508 | 3.45e-108 | 330 |
| Msa0423020 | AT5G42930.2 | 44.077 | 363 | 181 | 5 | 31 | 373 | 24 | 384 | 1.35e-101 | 309 |
| Msa0423020 | AT1G45201.2 | 45.210 | 334 | 161 | 6 | 57 | 373 | 57 | 385 | 6.48e-92 | 284 |
| Msa0423020 | AT5G18640.5 | 25.856 | 263 | 147 | 13 | 102 | 350 | 11 | 239 | 5.18e-11 | 63.9 |
Find 81 sgRNAs with CRISPR-Local
Find 268 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATCTCATGGTTGGAGCTTCC+TGG | 0.307084 | 3_2:+72657752 | Msa0423020:CDS |
| AACACAATGTCCTTTATATC+AGG | 0.310096 | 3_2:-72658169 | None:intergenic |
| GCATGAGGAGTCATTTCTTT+TGG | 0.319373 | 3_2:+72658003 | Msa0423020:CDS |
| CTTCAAGGGGTTTACACATT+TGG | 0.328267 | 3_2:+72658031 | Msa0423020:CDS |
| TGATTTGTTTCAATTTGTTT+AGG | 0.333018 | 3_2:-72657839 | None:intergenic |
| GCTTATCCATTGAAATATCT+TGG | 0.339715 | 3_2:+72653827 | Msa0423020:CDS |
| TGTGTCTATTATTGGTCATA+TGG | 0.359041 | 3_2:+72654438 | Msa0423020:CDS |
| GAGAAGAATTTGAAAGATAA+TGG | 0.384043 | 3_2:+72658094 | Msa0423020:CDS |
| ACATTGTGTTTAAGCACTTT+GGG | 0.384637 | 3_2:+72658182 | Msa0423020:CDS |
| GGTAAGGTTAACATAATCTT+GGG | 0.389871 | 3_2:-72658575 | None:intergenic |
| TTAAGAGCATTTCGGCTTGT+TGG | 0.392156 | 3_2:+72658520 | Msa0423020:CDS |
| CTTGTTGGCTTACTAGTGCC+TGG | 0.403502 | 3_2:+72658535 | Msa0423020:CDS |
| TAGGTTTCCTCCTGATATAA+AGG | 0.410316 | 3_2:+72658159 | Msa0423020:CDS |
| TGGTTGGAGCTTCCTGGACT+TGG | 0.410975 | 3_2:+72657758 | Msa0423020:CDS |
| TAATGCTGCTTTGTTTATGA+TGG | 0.415323 | 3_2:+72654510 | Msa0423020:CDS |
| GACATTGTGTTTAAGCACTT+TGG | 0.419779 | 3_2:+72658181 | Msa0423020:CDS |
| GCTGGTTTCATGAAAGCCTT+AGG | 0.419839 | 3_2:+72657791 | Msa0423020:CDS |
| TTGTGGCATGCGGTGACTAC+TGG | 0.426475 | 3_2:+72654968 | Msa0423020:CDS |
| TCGAGAAAATTGATCCCAAC+CGG | 0.427082 | 3_2:-72658597 | None:intergenic |
| TAATCTTGGGGTAAGTGATT+AGG | 0.433362 | 3_2:-72658562 | None:intergenic |
| TATGTTAACCTTACCCGGTT+GGG | 0.444416 | 3_2:+72658583 | Msa0423020:CDS |
| GGGTAAGGTTAACATAATCT+TGG | 0.451197 | 3_2:-72658576 | None:intergenic |
| AAAGCAAAGTTTATATTGAC+TGG | 0.451591 | 3_2:+72657929 | Msa0423020:CDS |
| GTTGCTTCTTTGTAAACCTA+AGG | 0.452412 | 3_2:-72657807 | None:intergenic |
| TGAAACTTGGCAGATTATCA+AGG | 0.466744 | 3_2:+72657611 | Msa0423020:intron |
| GTTATTTGATGCCGAACAAT+GGG | 0.468136 | 3_2:+72657715 | Msa0423020:CDS |
| TGTTGTAGTTACCGCTAGCC+AGG | 0.477920 | 3_2:-72653874 | None:intergenic |
| ACAATCACCTGCCCATTGTT+CGG | 0.479610 | 3_2:-72657726 | None:intergenic |
| AGTAGTAAGCTTCAAGTGTA+TGG | 0.481831 | 3_2:-72657865 | None:intergenic |
| AAATTGATCCCAACCGGGTA+AGG | 0.484292 | 3_2:-72658591 | None:intergenic |
| ATAGCTATGATATTATTCCT+AGG | 0.487380 | 3_2:+72658140 | Msa0423020:CDS |
| TCTGACAAATTTGCTGCTAC+CGG | 0.491924 | 3_2:+72653620 | Msa0423020:CDS |
| TTTACTAAAGAAACATTTGA+AGG | 0.493912 | 3_2:+72657898 | Msa0423020:CDS |
| TATGGACAAGCGAGTGGAGT+TGG | 0.502914 | 3_2:+72654456 | Msa0423020:CDS |
| ATATTGACTGGTCACAGTCT+AGG | 0.505731 | 3_2:+72657941 | Msa0423020:CDS |
| ACATTTGGTCAACCAAGAGT+TGG | 0.509933 | 3_2:+72658046 | Msa0423020:CDS |
| GCTCATAAGGAGCTTCACTA+TGG | 0.518248 | 3_2:+72658459 | Msa0423020:CDS |
| ACCCATCCCTCTTGATACTC+AGG | 0.520693 | 3_2:-72658496 | None:intergenic |
| AATATGTCATCTCCAACTCT+TGG | 0.523235 | 3_2:-72658058 | None:intergenic |
| TTCACTATGGTGTCTAGGTA+TGG | 0.526854 | 3_2:+72658472 | Msa0423020:CDS |
| GGGACATAGTTGAAAATCGT+TGG | 0.527074 | 3_2:+72654569 | Msa0423020:CDS |
| GGAGCTTCACTATGGTGTCT+AGG | 0.529109 | 3_2:+72658467 | Msa0423020:CDS |
| AAAGTTAGCTGTGTGTAACT+TGG | 0.530122 | 3_2:-72653708 | None:intergenic |
| ATGAAGCCAAGATATTTCAA+TGG | 0.531705 | 3_2:-72653833 | None:intergenic |
| TACAAAGAAGCAACATGGGT+TGG | 0.532370 | 3_2:+72657816 | Msa0423020:CDS |
| AGTTATTTGATGCCGAACAA+TGG | 0.541427 | 3_2:+72657714 | Msa0423020:CDS |
| GACCTGAGTATCAAGAGGGA+TGG | 0.541599 | 3_2:+72658494 | Msa0423020:CDS |
| AAGATTATGTTAACCTTACC+CGG | 0.543967 | 3_2:+72658578 | Msa0423020:CDS |
| TTATGTTAACCTTACCCGGT+TGG | 0.555126 | 3_2:+72658582 | Msa0423020:CDS |
| TTTGATGCCGAACAATGGGC+AGG | 0.556915 | 3_2:+72657719 | Msa0423020:CDS |
| TGACATATTTGCTCAATACA+TGG | 0.562540 | 3_2:+72658072 | Msa0423020:CDS |
| CATAGTTGAAAATCGTTGGA+AGG | 0.564748 | 3_2:+72654573 | Msa0423020:CDS |
| GGTAAGTGATTAGGTACTCC+AGG | 0.565069 | 3_2:-72658553 | None:intergenic |
| TTACTAAAGAAACATTTGAA+GGG | 0.565367 | 3_2:+72657899 | Msa0423020:CDS |
| GAGTTGGACAAAAGCATCAA+AGG | 0.572010 | 3_2:+72654472 | Msa0423020:CDS |
| TCATGCAACATCAATATCGC+AGG | 0.573993 | 3_2:-72657986 | None:intergenic |
| ACCTGAGTATCAAGAGGGAT+GGG | 0.576968 | 3_2:+72658495 | Msa0423020:CDS |
| TTTCCTCTTCAAGAACCTCA+TGG | 0.578584 | 3_2:-72653739 | None:intergenic |
| TCCTCTAAAAGTTACTATGT+AGG | 0.579783 | 3_2:-72657687 | None:intergenic |
| AGGTTTACAAAGAAGCAACA+TGG | 0.584733 | 3_2:+72657811 | Msa0423020:CDS |
| TGATAGAAACTATAATGGCA+AGG | 0.584877 | 3_2:+72658219 | Msa0423020:CDS |
| CAGGTGATTGTGATATCTCA+TGG | 0.585512 | 3_2:+72657738 | Msa0423020:CDS |
| TTTATATCAGGAGGAAACCT+AGG | 0.585879 | 3_2:-72658157 | None:intergenic |
| ACAAAGCAGCATTATACTTG+AGG | 0.592763 | 3_2:-72654501 | None:intergenic |
| TTGTTCGGCATCAAATAACT+CGG | 0.595760 | 3_2:-72657711 | None:intergenic |
| GTGCCATGAGGTTCTTGAAG+AGG | 0.603209 | 3_2:+72653736 | Msa0423020:CDS |
| CGAGAAAATTGATCCCAACC+GGG | 0.608715 | 3_2:-72658596 | None:intergenic |
| GGTTTACAAAGAAGCAACAT+GGG | 0.611206 | 3_2:+72657812 | Msa0423020:CDS |
| TGGTCATATGGACAAGCGAG+TGG | 0.611878 | 3_2:+72654450 | Msa0423020:CDS |
| TGATTGTGATATCTCATGGT+TGG | 0.618477 | 3_2:+72657742 | Msa0423020:CDS |
| GTATGGACCTGAGTATCAAG+AGG | 0.628629 | 3_2:+72658489 | Msa0423020:CDS |
| ACAATGTCCTTTATATCAGG+AGG | 0.632118 | 3_2:-72658166 | None:intergenic |
| AAGTTACTATGTAGGTGTCG+TGG | 0.646562 | 3_2:-72657679 | None:intergenic |
| TTGACTGGTCACAGTCTAGG+TGG | 0.654349 | 3_2:+72657944 | Msa0423020:CDS |
| TCTTGCATAGATGGAAGTTG+TGG | 0.658461 | 3_2:+72654951 | Msa0423020:intron |
| TGCGATATTGATGTTGCATG+AGG | 0.662471 | 3_2:+72657988 | Msa0423020:CDS |
| GCATGCGGTGACTACTGGAA+TGG | 0.666193 | 3_2:+72654973 | Msa0423020:CDS |
| TATGGACCTGAGTATCAAGA+GGG | 0.673621 | 3_2:+72658490 | Msa0423020:CDS |
| GTAAGGTTAACATAATCTTG+GGG | 0.683904 | 3_2:-72658574 | None:intergenic |
| TAGATGGAAGTTGTGGCATG+CGG | 0.719132 | 3_2:+72654958 | Msa0423020:intron |
| TAACTTTGTAGAGTGCCATG+AGG | 0.727113 | 3_2:+72653724 | Msa0423020:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTAAAATAAAATTATTTTT+TGG | + | chr3_2:72656577-72656596 | Msa0423020:intron | 0.0% |
| !!! | TAATATTTACGTTTTAAATA+AGG | + | chr3_2:72654114-72654133 | Msa0423020:intron | 10.0% |
| !!! | AATATTTACGTTTTAAATAA+GGG | + | chr3_2:72654115-72654134 | Msa0423020:intron | 10.0% |
| !! | TTATAATTTACCTATAAAAT+TGG | + | chr3_2:72654879-72654898 | Msa0423020:intron | 10.0% |
| !! | ATAAAAATTAAATTTGATCA+TGG | - | chr3_2:72655454-72655473 | None:intergenic | 10.0% |
| !!! | AATCAAATTATTTGTTAATT+TGG | - | chr3_2:72656423-72656442 | None:intergenic | 10.0% |
| !!! | ACAAAATAAAAGTTTTTTTT+TGG | - | chr3_2:72656552-72656571 | None:intergenic | 10.0% |
| !! | ATTGATACATAAAAAATTAT+GGG | - | chr3_2:72656980-72656999 | None:intergenic | 10.0% |
| !! | AATCTTTCAATAAGTTAAAA+TGG | - | chr3_2:72654274-72654293 | None:intergenic | 15.0% |
| !! | AATATTTGTATTATGAATAC+AGG | + | chr3_2:72655100-72655119 | Msa0423020:intron | 15.0% |
| !!! | CTTGTTTGTATTTTTTTTTT+TGG | - | chr3_2:72655170-72655189 | None:intergenic | 15.0% |
| !!! | TTGCATTTTTCTTTTATTAA+GGG | - | chr3_2:72656166-72656185 | None:intergenic | 15.0% |
| !!! | TTTGCATTTTTCTTTTATTA+AGG | - | chr3_2:72656167-72656186 | None:intergenic | 15.0% |
| !!! | TTTATATCAAACTCTAAAAA+AGG | - | chr3_2:72656458-72656477 | None:intergenic | 15.0% |
| !! | GGTAAATCTAAAAAAAAAAA+GGG | - | chr3_2:72656846-72656865 | None:intergenic | 15.0% |
| !! | TGGTAAATCTAAAAAAAAAA+AGG | - | chr3_2:72656847-72656866 | None:intergenic | 15.0% |
| !! | CATTGATACATAAAAAATTA+TGG | - | chr3_2:72656981-72657000 | None:intergenic | 15.0% |
| !! | AAAAATAAATTGTGCTAAAT+AGG | + | chr3_2:72657088-72657107 | Msa0423020:intron | 15.0% |
| !! | ATAGATATTAGAAAATATAC+GGG | - | chr3_2:72657226-72657245 | None:intergenic | 15.0% |
| !! | GATAGATATTAGAAAATATA+CGG | - | chr3_2:72657227-72657246 | None:intergenic | 15.0% |
| !!! | ATTTATTTTAGTTTAAATGC+AGG | + | chr3_2:72657408-72657427 | Msa0423020:intron | 15.0% |
| !!! | TTTTTTGATAGAAACTATAA+TGG | + | chr3_2:72658214-72658233 | Msa0423020:CDS | 15.0% |
| !! | AATCCTTAATAAGTATTCTT+AGG | + | chr3_2:72654342-72654361 | Msa0423020:intron | 20.0% |
| !! | ATCCTTAATAAGTATTCTTA+GGG | + | chr3_2:72654343-72654362 | Msa0423020:intron | 20.0% |
| !! | CTATTCACACAATATATATA+GGG | - | chr3_2:72654384-72654403 | None:intergenic | 20.0% |
| !!! | TTTTTTCGTTAGCATATTAT+TGG | + | chr3_2:72654694-72654713 | Msa0423020:intron | 20.0% |
| !! | ATTAATTCATAGTTGACAAA+AGG | + | chr3_2:72654855-72654874 | Msa0423020:intron | 20.0% |
| !! | AAATACAAACAAGAATGATA+TGG | + | chr3_2:72655177-72655196 | Msa0423020:intron | 20.0% |
| !! | AATACAAACAAGAATGATAT+GGG | + | chr3_2:72655178-72655197 | Msa0423020:intron | 20.0% |
| !!! | GTCTTTTATAAAAGTGTAAA+AGG | - | chr3_2:72655625-72655644 | None:intergenic | 20.0% |
| !! | TATTTGAACAATCATTTGAT+TGG | + | chr3_2:72655787-72655806 | Msa0423020:intron | 20.0% |
| !! | ATTTGAACAATCATTTGATT+GGG | + | chr3_2:72655788-72655807 | Msa0423020:intron | 20.0% |
| !! | AGATTTACAAAGAAAGATAT+TGG | + | chr3_2:72655829-72655848 | Msa0423020:intron | 20.0% |
| !! | ATTGATACCTAAAAAAACAT+GGG | - | chr3_2:72656885-72656904 | None:intergenic | 20.0% |
| !!! | AAGGGATAAATATTTCTAAT+TGG | - | chr3_2:72657135-72657154 | None:intergenic | 20.0% |
| !!! | ATAATAGTAAGGTTGATTAT+TGG | + | chr3_2:72657580-72657599 | Msa0423020:intron | 20.0% |
| !!! | TGATTTGTTTCAATTTGTTT+AGG | - | chr3_2:72657842-72657861 | None:intergenic | 20.0% |
| !! | TTTACTAAAGAAACATTTGA+AGG | + | chr3_2:72657898-72657917 | Msa0423020:CDS | 20.0% |
| !! | TTACTAAAGAAACATTTGAA+GGG | + | chr3_2:72657899-72657918 | Msa0423020:CDS | 20.0% |
| !!! | AAAGAAAAGTAGTTTTTGTT+TGG | - | chr3_2:72658400-72658419 | None:intergenic | 20.0% |
| ! | TTCTTGAACTCCAAAAATAT+TGG | + | chr3_2:72653650-72653669 | Msa0423020:CDS | 25.0% |
| ! | TCTTGAACTCCAAAAATATT+GGG | + | chr3_2:72653651-72653670 | Msa0423020:CDS | 25.0% |
| !! | TTCAAAGAACCCAATATTTT+TGG | - | chr3_2:72653663-72653682 | None:intergenic | 25.0% |
| !!! | CTATTTCGAGTCTATATTTT+TGG | + | chr3_2:72653683-72653702 | Msa0423020:CDS | 25.0% |
| !! | ATCATTTTGAACTTTCTACA+GGG | + | chr3_2:72653905-72653924 | Msa0423020:intron | 25.0% |
| ! | AAAAGCTAACTATTCTATCA+TGG | + | chr3_2:72654047-72654066 | Msa0423020:intron | 25.0% |
| !!! | TACGTTTTAAATAAGGGTTA+AGG | + | chr3_2:72654121-72654140 | Msa0423020:intron | 25.0% |
| ! | CCTATTCACACAATATATAT+AGG | - | chr3_2:72654385-72654404 | None:intergenic | 25.0% |
| ! | CCTATATATATTGTGTGAAT+AGG | + | chr3_2:72654382-72654401 | Msa0423020:intron | 25.0% |
| ! | ATATATTGTGTGAATAGGTA+AGG | + | chr3_2:72654387-72654406 | Msa0423020:intron | 25.0% |
| ! | TGCTGAAAAGAAACTAATTA+AGG | - | chr3_2:72654663-72654682 | None:intergenic | 25.0% |
| !!! | AATTAGTTTCTTTTCAGCAA+AGG | + | chr3_2:72654664-72654683 | Msa0423020:intron | 25.0% |
| !!! | ATTAGTTTCTTTTCAGCAAA+GGG | + | chr3_2:72654665-72654684 | Msa0423020:intron | 25.0% |
| ! | ATGAATTCTCTTCTTGAAAT+CGG | + | chr3_2:72654755-72654774 | Msa0423020:intron | 25.0% |
| ! | TATGCTCAAATGATATGAAT+GGG | - | chr3_2:72655052-72655071 | None:intergenic | 25.0% |
| ! | TAGTAAAAAATATCTGCAAC+AGG | + | chr3_2:72655070-72655089 | Msa0423020:intron | 25.0% |
| !!! | TATATGTGCGATTTTAGAAA+TGG | + | chr3_2:72655252-72655271 | Msa0423020:intron | 25.0% |
| ! | TTTATAAATGGGGATAATTC+GGG | - | chr3_2:72655425-72655444 | None:intergenic | 25.0% |
| ! | GTTTATAAATGGGGATAATT+CGG | - | chr3_2:72655426-72655445 | None:intergenic | 25.0% |
| ! | ATTAAATTTGATCATGGTTC+TGG | - | chr3_2:72655448-72655467 | None:intergenic | 25.0% |
| ! | TTTCTCCAACAAGTAATTTA+TGG | - | chr3_2:72655731-72655750 | None:intergenic | 25.0% |
| ! | AATGCAAACACAACAATAAT+AGG | + | chr3_2:72655957-72655976 | Msa0423020:intron | 25.0% |
| !!! | TTTGGTTCTTGATTAGAATA+TGG | - | chr3_2:72656286-72656305 | None:intergenic | 25.0% |
| !!! | AACAACAATCTGACTTTTTT+TGG | - | chr3_2:72656304-72656323 | None:intergenic | 25.0% |
| !!! | CATCTCTTAATTTTTTTTCC+AGG | - | chr3_2:72656373-72656392 | None:intergenic | 25.0% |
| ! | GTGATTGATACATAGATAAA+AGG | - | chr3_2:72656813-72656832 | None:intergenic | 25.0% |
| !!! | TATTTCTCCCATGTTTTTTT+AGG | + | chr3_2:72656875-72656894 | Msa0423020:intron | 25.0% |
| ! | CATTGATACCTAAAAAAACA+TGG | - | chr3_2:72656886-72656905 | None:intergenic | 25.0% |
| !!! | CATGTTTTTTTAGGTATCAA+TGG | + | chr3_2:72656884-72656903 | Msa0423020:intron | 25.0% |
| !!! | GTATCAATGGCTATTTTTTT+CGG | + | chr3_2:72656897-72656916 | Msa0423020:intron | 25.0% |
| ! | AATCATACAAAAAAAATCGC+GGG | - | chr3_2:72657190-72657209 | None:intergenic | 25.0% |
| ! | GAATCATACAAAAAAAATCG+CGG | - | chr3_2:72657191-72657210 | None:intergenic | 25.0% |
| ! | TAAGTTGTGGAAATACATTA+GGG | + | chr3_2:72657309-72657328 | Msa0423020:intron | 25.0% |
| ! | TTAAATGCAGGTAATGAATA+TGG | + | chr3_2:72657420-72657439 | Msa0423020:intron | 25.0% |
| ! | TAAATGCAGGTAATGAATAT+GGG | + | chr3_2:72657421-72657440 | Msa0423020:intron | 25.0% |
| ! | AAAGCAAAGTTTATATTGAC+TGG | + | chr3_2:72657929-72657948 | Msa0423020:CDS | 25.0% |
| ! | ATAGCTATGATATTATTCCT+AGG | + | chr3_2:72658140-72658159 | Msa0423020:CDS | 25.0% |
| !!! | CAAAAACTACTTTTCTTTGT+CGG | + | chr3_2:72658402-72658421 | Msa0423020:CDS | 25.0% |
| GCTTATCCATTGAAATATCT+TGG | + | chr3_2:72653827-72653846 | Msa0423020:CDS | 30.0% | |
| ATGAAGCCAAGATATTTCAA+TGG | - | chr3_2:72653836-72653855 | None:intergenic | 30.0% | |
| !!! | TGTTGAGTTATTTTTGAACC+TGG | + | chr3_2:72653856-72653875 | Msa0423020:CDS | 30.0% |
| ! | GATCATTTTGAACTTTCTAC+AGG | + | chr3_2:72653904-72653923 | Msa0423020:intron | 30.0% |
| TGCCCTAAGAATACTTATTA+AGG | - | chr3_2:72654348-72654367 | None:intergenic | 30.0% | |
| ! | GCAGATTTTGTGTCTATTAT+TGG | + | chr3_2:72654430-72654449 | Msa0423020:CDS | 30.0% |
| TGTGTCTATTATTGGTCATA+TGG | + | chr3_2:72654438-72654457 | Msa0423020:CDS | 30.0% | |
| !! | TAATGCTGCTTTGTTTATGA+TGG | + | chr3_2:72654510-72654529 | Msa0423020:CDS | 30.0% |
| ! | ACGAGAATGAAGCTTTTATA+CGG | + | chr3_2:72654548-72654567 | Msa0423020:CDS | 30.0% |
| TCGTTAGCATATTATTGGTA+TGG | + | chr3_2:72654699-72654718 | Msa0423020:intron | 30.0% | |
| AGATTTAGACCTTAAGTAAG+TGG | - | chr3_2:72654823-72654842 | None:intergenic | 30.0% | |
| !! | GACAATTTACTTTTAGCTAG+TGG | - | chr3_2:72654905-72654924 | None:intergenic | 30.0% |
| CTATGCTCAAATGATATGAA+TGG | - | chr3_2:72655053-72655072 | None:intergenic | 30.0% | |
| CGAGACATTTATTTGTTTGA+TGG | - | chr3_2:72655336-72655355 | None:intergenic | 30.0% | |
| !! | ATGGTTCTGGTTTATAAATG+GGG | - | chr3_2:72655435-72655454 | None:intergenic | 30.0% |
| !! | CATGGTTCTGGTTTATAAAT+GGG | - | chr3_2:72655436-72655455 | None:intergenic | 30.0% |
| !! | TCATGGTTCTGGTTTATAAA+TGG | - | chr3_2:72655437-72655456 | None:intergenic | 30.0% |
| AAAGTGTAAAAGGTCAAAGT+GGG | - | chr3_2:72655615-72655634 | None:intergenic | 30.0% | |
| ! | AAAAGTGTAAAAGGTCAAAG+TGG | - | chr3_2:72655616-72655635 | None:intergenic | 30.0% |
| ! | AATGTTGTTTGATGTCATTG+TGG | + | chr3_2:72655658-72655677 | Msa0423020:intron | 30.0% |
| ! | ATGTTGTTTGATGTCATTGT+GGG | + | chr3_2:72655659-72655678 | Msa0423020:intron | 30.0% |
| CACTTAGCATTATGTAAAGA+GGG | - | chr3_2:72655766-72655785 | None:intergenic | 30.0% | |
| ACACTTAGCATTATGTAAAG+AGG | - | chr3_2:72655767-72655786 | None:intergenic | 30.0% | |
| TCATTTGATTGGGAACTTAT+AGG | + | chr3_2:72655798-72655817 | Msa0423020:intron | 30.0% | |
| ! | CAAACTCTAAAAAAGGTAAG+TGG | - | chr3_2:72656451-72656470 | None:intergenic | 30.0% |
| ATGGGAGAAATATTTGTCAT+TGG | - | chr3_2:72656867-72656886 | None:intergenic | 30.0% | |
| !! | ATTTCCATAGTGGATTCAAA+GGG | + | chr3_2:72657284-72657303 | Msa0423020:intron | 30.0% |
| CTAAGTTGTGGAAATACATT+AGG | + | chr3_2:72657308-72657327 | Msa0423020:intron | 30.0% | |
| !!! | TTTTTTGTCTCTCCAAATTG+CGG | + | chr3_2:72657505-72657524 | Msa0423020:intron | 30.0% |
| GATGACAATGAATAAGTTCT+AGG | - | chr3_2:72657550-72657569 | None:intergenic | 30.0% | |
| !!! | CCTTACTATTATTTTGATCC+AGG | - | chr3_2:72657572-72657591 | None:intergenic | 30.0% |
| CCTGGATCAAAATAATAGTA+AGG | + | chr3_2:72657569-72657588 | Msa0423020:intron | 30.0% | |
| ! | TAGTAAGGTTGATTATTGGT+TGG | + | chr3_2:72657584-72657603 | Msa0423020:intron | 30.0% |
| ! | ATTGGTTGGTATTTGAAACT+TGG | + | chr3_2:72657598-72657617 | Msa0423020:intron | 30.0% |
| ! | ACCTACATAGTAACTTTTAG+AGG | + | chr3_2:72657686-72657705 | Msa0423020:CDS | 30.0% |
| ! | TCCTCTAAAAGTTACTATGT+AGG | - | chr3_2:72657690-72657709 | None:intergenic | 30.0% |
| TGACATATTTGCTCAATACA+TGG | + | chr3_2:72658072-72658091 | Msa0423020:CDS | 30.0% | |
| AACACAATGTCCTTTATATC+AGG | - | chr3_2:72658172-72658191 | None:intergenic | 30.0% | |
| ACATTGTGTTTAAGCACTTT+GGG | + | chr3_2:72658182-72658201 | Msa0423020:CDS | 30.0% | |
| TGATAGAAACTATAATGGCA+AGG | + | chr3_2:72658219-72658238 | Msa0423020:CDS | 30.0% | |
| !! | AATGTCAGTGAATGCTTTTT+GGG | + | chr3_2:72658435-72658454 | Msa0423020:CDS | 30.0% |
| GTAAGGTTAACATAATCTTG+GGG | - | chr3_2:72658577-72658596 | None:intergenic | 30.0% | |
| GGTAAGGTTAACATAATCTT+GGG | - | chr3_2:72658578-72658597 | None:intergenic | 30.0% | |
| AAGATTATGTTAACCTTACC+CGG | + | chr3_2:72658578-72658597 | Msa0423020:CDS | 30.0% | |
| GGAGTTCAAGAACAAAAAAC+CGG | - | chr3_2:72653642-72653661 | None:intergenic | 35.0% | |
| AAAGTTAGCTGTGTGTAACT+TGG | - | chr3_2:72653711-72653730 | None:intergenic | 35.0% | |
| !!! | TTATTTTTGAACCTGGCTAG+CGG | + | chr3_2:72653863-72653882 | Msa0423020:CDS | 35.0% |
| CACAAGGAAAAAAATCTTCG+TGG | - | chr3_2:72653984-72654003 | None:intergenic | 35.0% | |
| !!! | CACGAAGATTTTTTTCCTTG+TGG | + | chr3_2:72653982-72654001 | Msa0423020:intron | 35.0% |
| ! | AAAAAGTGTGCAAATCCACA+AGG | - | chr3_2:72654000-72654019 | None:intergenic | 35.0% |
| ! | TGTTTGTATTTGATAGCCGA+CGG | - | chr3_2:72654028-72654047 | None:intergenic | 35.0% |
| GCACAAAAGTAGACATGAAT+TGG | + | chr3_2:72654080-72654099 | Msa0423020:intron | 35.0% | |
| ACAAAGCAGCATTATACTTG+AGG | - | chr3_2:72654504-72654523 | None:intergenic | 35.0% | |
| ! | CGAGAATGAAGCTTTTATAC+GGG | + | chr3_2:72654549-72654568 | Msa0423020:CDS | 35.0% |
| CATAGTTGAAAATCGTTGGA+AGG | + | chr3_2:72654573-72654592 | Msa0423020:CDS | 35.0% | |
| ACACATGAACCACTTACTTA+AGG | + | chr3_2:72654811-72654830 | Msa0423020:intron | 35.0% | |
| ! | TAGCTAGTGGCCAATTTTAT+AGG | - | chr3_2:72654892-72654911 | None:intergenic | 35.0% |
| ! | TTTTTGTGCTCTTGCATAGA+TGG | + | chr3_2:72654942-72654961 | Msa0423020:intron | 35.0% |
| ATGATATGAATGGGAGAGTA+TGG | - | chr3_2:72655043-72655062 | None:intergenic | 35.0% | |
| TGTAAGATTACACCACCAAT+TGG | + | chr3_2:72655388-72655407 | Msa0423020:intron | 35.0% | |
| ! | GTGTTCAATTTTCCAATTGG+TGG | - | chr3_2:72655403-72655422 | None:intergenic | 35.0% |
| ATCAGATACACAACTTTAGC+AGG | + | chr3_2:72655472-72655491 | Msa0423020:intron | 35.0% | |
| AGGAATAAAGTCATCTTCGA+AGG | - | chr3_2:72655511-72655530 | None:intergenic | 35.0% | |
| !! | GTTGTAGTGTGGTGTTTTTA+GGG | - | chr3_2:72655538-72655557 | None:intergenic | 35.0% |
| ! | TGTTGTAGTGTGGTGTTTTT+AGG | - | chr3_2:72655539-72655558 | None:intergenic | 35.0% |
| !! | CAACATTGTTTGTTGTAGTG+TGG | - | chr3_2:72655549-72655568 | None:intergenic | 35.0% |
| ! | AAGTGGGTGAATTTTCAACA+TGG | - | chr3_2:72655599-72655618 | None:intergenic | 35.0% |
| ! | TGTTGTTTGATGTCATTGTG+GGG | + | chr3_2:72655660-72655679 | Msa0423020:intron | 35.0% |
| ! | GTAGTTGGATTGGAGTAAAT+GGG | - | chr3_2:72655690-72655709 | None:intergenic | 35.0% |
| TCACGCCATAAATTACTTGT+TGG | + | chr3_2:72655723-72655742 | Msa0423020:intron | 35.0% | |
| TTAGCATTATGTAAAGAGGG+AGG | - | chr3_2:72655763-72655782 | None:intergenic | 35.0% | |
| !! | CTCACTTAAGCTCTAAAATG+AGG | - | chr3_2:72656022-72656041 | None:intergenic | 35.0% |
| ! | GGACACAAATTTGTCTTTTG+TGG | - | chr3_2:72656686-72656705 | None:intergenic | 35.0% |
| !! | CATTTCCATAGTGGATTCAA+AGG | + | chr3_2:72657283-72657302 | Msa0423020:intron | 35.0% |
| TTAAGATCTCTACTGTAGTC+TGG | + | chr3_2:72657475-72657494 | Msa0423020:intron | 35.0% | |
| TAAGATCTCTACTGTAGTCT+GGG | + | chr3_2:72657476-72657495 | Msa0423020:intron | 35.0% | |
| ! | TTTTTGTCTCTCCAAATTGC+GGG | + | chr3_2:72657506-72657525 | Msa0423020:intron | 35.0% |
| GAACTTATTCATTGTCATCC+TGG | + | chr3_2:72657551-72657570 | Msa0423020:intron | 35.0% | |
| TGAAACTTGGCAGATTATCA+AGG | + | chr3_2:72657611-72657630 | Msa0423020:intron | 35.0% | |
| TTGTTCGGCATCAAATAACT+CGG | - | chr3_2:72657714-72657733 | None:intergenic | 35.0% | |
| AGTTATTTGATGCCGAACAA+TGG | + | chr3_2:72657714-72657733 | Msa0423020:CDS | 35.0% | |
| GTTATTTGATGCCGAACAAT+GGG | + | chr3_2:72657715-72657734 | Msa0423020:CDS | 35.0% | |
| TGATTGTGATATCTCATGGT+TGG | + | chr3_2:72657742-72657761 | Msa0423020:CDS | 35.0% | |
| GTTGCTTCTTTGTAAACCTA+AGG | - | chr3_2:72657810-72657829 | None:intergenic | 35.0% | |
| AGGTTTACAAAGAAGCAACA+TGG | + | chr3_2:72657811-72657830 | Msa0423020:CDS | 35.0% | |
| GGTTTACAAAGAAGCAACAT+GGG | + | chr3_2:72657812-72657831 | Msa0423020:CDS | 35.0% | |
| AGTAGTAAGCTTCAAGTGTA+TGG | - | chr3_2:72657868-72657887 | None:intergenic | 35.0% | |
| AATATGTCATCTCCAACTCT+TGG | - | chr3_2:72658061-72658080 | None:intergenic | 35.0% | |
| TTTATATCAGGAGGAAACCT+AGG | - | chr3_2:72658160-72658179 | None:intergenic | 35.0% | |
| TAGGTTTCCTCCTGATATAA+AGG | + | chr3_2:72658159-72658178 | Msa0423020:CDS | 35.0% | |
| ACAATGTCCTTTATATCAGG+AGG | - | chr3_2:72658169-72658188 | None:intergenic | 35.0% | |
| GACATTGTGTTTAAGCACTT+TGG | + | chr3_2:72658181-72658200 | Msa0423020:CDS | 35.0% | |
| !! | ACATTTTCAGAAAGTGCAAG+AGG | + | chr3_2:72658372-72658391 | Msa0423020:intron | 35.0% |
| !! | CAAAAAGCATTCACTGACAT+TGG | - | chr3_2:72658436-72658455 | None:intergenic | 35.0% |
| ! | CAATGTCAGTGAATGCTTTT+TGG | + | chr3_2:72658434-72658453 | Msa0423020:CDS | 35.0% |
| !!! | GATGGGTTTTAAGAGCATTT+CGG | + | chr3_2:72658512-72658531 | Msa0423020:CDS | 35.0% |
| TAATCTTGGGGTAAGTGATT+AGG | - | chr3_2:72658565-72658584 | None:intergenic | 35.0% | |
| GGGTAAGGTTAACATAATCT+TGG | - | chr3_2:72658579-72658598 | None:intergenic | 35.0% | |
| !! | TCTGACAAATTTGCTGCTAC+CGG | + | chr3_2:72653620-72653639 | Msa0423020:CDS | 40.0% |
| ! | TAACTTTGTAGAGTGCCATG+AGG | + | chr3_2:72653724-72653743 | Msa0423020:CDS | 40.0% |
| TTTCCTCTTCAAGAACCTCA+TGG | - | chr3_2:72653742-72653761 | None:intergenic | 40.0% | |
| !! | GAGTTGGACAAAAGCATCAA+AGG | + | chr3_2:72654472-72654491 | Msa0423020:CDS | 40.0% |
| GGGACATAGTTGAAAATCGT+TGG | + | chr3_2:72654569-72654588 | Msa0423020:CDS | 40.0% | |
| CGTATGTGTCCACAACTAAA+CGG | - | chr3_2:72654735-72654754 | None:intergenic | 40.0% | |
| TCTTGCATAGATGGAAGTTG+TGG | + | chr3_2:72654951-72654970 | Msa0423020:intron | 40.0% | |
| ! | CGGGTGTTCAATTTTCCAAT+TGG | - | chr3_2:72655406-72655425 | None:intergenic | 40.0% |
| ! | CGTAGTTGGATTGGAGTAAA+TGG | - | chr3_2:72655691-72655710 | None:intergenic | 40.0% |
| CAATCCAACTACGTACTTCA+CGG | + | chr3_2:72655698-72655717 | Msa0423020:intron | 40.0% | |
| AACATATCATCTCTCCAACC+AGG | + | chr3_2:72656094-72656113 | Msa0423020:intron | 40.0% | |
| ACATATCATCTCTCCAACCA+GGG | + | chr3_2:72656095-72656114 | Msa0423020:intron | 40.0% | |
| TTGTGTCTCCACTTTGATTG+GGG | - | chr3_2:72656124-72656143 | None:intergenic | 40.0% | |
| GTTGTGTCTCCACTTTGATT+GGG | - | chr3_2:72656125-72656144 | None:intergenic | 40.0% | |
| AGTTGTGTCTCCACTTTGAT+TGG | - | chr3_2:72656126-72656145 | None:intergenic | 40.0% | |
| CAGGTTCAACTTCAACATTG+TGG | - | chr3_2:72656354-72656373 | None:intergenic | 40.0% | |
| CACAATGTTGAAGTTGAACC+TGG | + | chr3_2:72656352-72656371 | Msa0423020:intron | 40.0% | |
| !! | AATGATCGTTGAGTTGACAG+CGG | - | chr3_2:72657267-72657286 | None:intergenic | 40.0% |
| CTCAACGATCATTTCCATAG+TGG | + | chr3_2:72657274-72657293 | Msa0423020:intron | 40.0% | |
| TAGACCCTTTGAATCCACTA+TGG | - | chr3_2:72657291-72657310 | None:intergenic | 40.0% | |
| GATTCAAAGGGTCTAAGTTG+TGG | + | chr3_2:72657296-72657315 | Msa0423020:intron | 40.0% | |
| AGCGTACATGTATCACATGT+GGG | + | chr3_2:72657450-72657469 | Msa0423020:intron | 40.0% | |
| ! | AAGTTACTATGTAGGTGTCG+TGG | - | chr3_2:72657682-72657701 | None:intergenic | 40.0% |
| CAGGTGATTGTGATATCTCA+TGG | + | chr3_2:72657738-72657757 | Msa0423020:CDS | 40.0% | |
| TACAAAGAAGCAACATGGGT+TGG | + | chr3_2:72657816-72657835 | Msa0423020:CDS | 40.0% | |
| ! | ATATTGACTGGTCACAGTCT+AGG | + | chr3_2:72657941-72657960 | Msa0423020:CDS | 40.0% |
| TCATGCAACATCAATATCGC+AGG | - | chr3_2:72657989-72658008 | None:intergenic | 40.0% | |
| TGCGATATTGATGTTGCATG+AGG | + | chr3_2:72657988-72658007 | Msa0423020:CDS | 40.0% | |
| ! | GCATGAGGAGTCATTTCTTT+TGG | + | chr3_2:72658003-72658022 | Msa0423020:CDS | 40.0% |
| !! | AGGAGTCATTTCTTTTGGAG+AGG | + | chr3_2:72658008-72658027 | Msa0423020:CDS | 40.0% |
| !! | TTTCTTTTGGAGAGGCTTCA+AGG | + | chr3_2:72658016-72658035 | Msa0423020:CDS | 40.0% |
| !! | TTCTTTTGGAGAGGCTTCAA+GGG | + | chr3_2:72658017-72658036 | Msa0423020:CDS | 40.0% |
| CTTCAAGGGGTTTACACATT+TGG | + | chr3_2:72658031-72658050 | Msa0423020:CDS | 40.0% | |
| ACATTTGGTCAACCAAGAGT+TGG | + | chr3_2:72658046-72658065 | Msa0423020:CDS | 40.0% | |
| !! | ATGCTTTTTGGGAGCTCATA+AGG | + | chr3_2:72658446-72658465 | Msa0423020:CDS | 40.0% |
| TTCACTATGGTGTCTAGGTA+TGG | + | chr3_2:72658472-72658491 | Msa0423020:CDS | 40.0% | |
| TATGGACCTGAGTATCAAGA+GGG | + | chr3_2:72658490-72658509 | Msa0423020:CDS | 40.0% | |
| !! | TTAAGAGCATTTCGGCTTGT+TGG | + | chr3_2:72658520-72658539 | Msa0423020:CDS | 40.0% |
| TTATGTTAACCTTACCCGGT+TGG | + | chr3_2:72658582-72658601 | Msa0423020:CDS | 40.0% | |
| TATGTTAACCTTACCCGGTT+GGG | + | chr3_2:72658583-72658602 | Msa0423020:CDS | 40.0% | |
| TCGAGAAAATTGATCCCAAC+CGG | - | chr3_2:72658600-72658619 | None:intergenic | 40.0% | |
| !!! | GCACACTTTTTCTGTTCCGT+CGG | + | chr3_2:72654009-72654028 | Msa0423020:intron | 45.0% |
| ATGTGTCCACAACTAAACGG+CGG | - | chr3_2:72654732-72654751 | None:intergenic | 45.0% | |
| TAGATGGAAGTTGTGGCATG+CGG | + | chr3_2:72654958-72654977 | Msa0423020:intron | 45.0% | |
| !!! | TGTGGTGTTTTTAGGGTGCA+AGG | - | chr3_2:72655531-72655550 | None:intergenic | 45.0% |
| CGTGAAGTACGTAGTTGGAT+TGG | - | chr3_2:72655700-72655719 | None:intergenic | 45.0% | |
| TAGTGTGCTAACCTGTGCTA+CGG | + | chr3_2:72656640-72656659 | Msa0423020:intron | 45.0% | |
| !! | ATGATCGTTGAGTTGACAGC+GGG | - | chr3_2:72657266-72657285 | None:intergenic | 45.0% |
| GAGCGTACATGTATCACATG+TGG | + | chr3_2:72657449-72657468 | Msa0423020:intron | 45.0% | |
| ACAATCACCTGCCCATTGTT+CGG | - | chr3_2:72657729-72657748 | None:intergenic | 45.0% | |
| ! | GCATGAGTTTTTCCAAGTCC+AGG | - | chr3_2:72657773-72657792 | None:intergenic | 45.0% |
| GGACTTGGAAAAACTCATGC+TGG | + | chr3_2:72657773-72657792 | Msa0423020:CDS | 45.0% | |
| ! | GCTGGTTTCATGAAAGCCTT+AGG | + | chr3_2:72657791-72657810 | Msa0423020:CDS | 45.0% |
| !! | TCTTTTGGAGAGGCTTCAAG+GGG | + | chr3_2:72658018-72658037 | Msa0423020:CDS | 45.0% |
| GCTCATAAGGAGCTTCACTA+TGG | + | chr3_2:72658459-72658478 | Msa0423020:CDS | 45.0% | |
| GTATGGACCTGAGTATCAAG+AGG | + | chr3_2:72658489-72658508 | Msa0423020:CDS | 45.0% | |
| ACCTGAGTATCAAGAGGGAT+GGG | + | chr3_2:72658495-72658514 | Msa0423020:CDS | 45.0% | |
| GGTAAGTGATTAGGTACTCC+AGG | - | chr3_2:72658556-72658575 | None:intergenic | 45.0% | |
| AAATTGATCCCAACCGGGTA+AGG | - | chr3_2:72658594-72658613 | None:intergenic | 45.0% | |
| CGAGAAAATTGATCCCAACC+GGG | - | chr3_2:72658599-72658618 | None:intergenic | 45.0% | |
| !! | ACTAATAAATATAAAAATAT+AGG | - | chr3_2:72656707-72656726 | None:intergenic | 5.0% |
| !! | TTGATAAATATATAAAAATT+GGG | - | chr3_2:72657053-72657072 | None:intergenic | 5.0% |
| !! | TTTGATAAATATATAAAAAT+TGG | - | chr3_2:72657054-72657073 | None:intergenic | 5.0% |
| !! | ATGATAAATATTTAAAAAAA+GGG | - | chr3_2:72657153-72657172 | None:intergenic | 5.0% |
| !! | AATGATAAATATTTAAAAAA+AGG | - | chr3_2:72657154-72657173 | None:intergenic | 5.0% |
| !!! | TTTTTTTTTTTTTTTTTTGA+GGG | - | chr3_2:72658265-72658284 | None:intergenic | 5.0% |
| !!! | ATTTTTTTTTTTTTTTTTTG+AGG | - | chr3_2:72658266-72658285 | None:intergenic | 5.0% |
| GTGCCATGAGGTTCTTGAAG+AGG | + | chr3_2:72653736-72653755 | Msa0423020:CDS | 50.0% | |
| TGTTGTAGTTACCGCTAGCC+AGG | - | chr3_2:72653877-72653896 | None:intergenic | 50.0% | |
| TGGTCATATGGACAAGCGAG+TGG | + | chr3_2:72654450-72654469 | Msa0423020:CDS | 50.0% | |
| TATGGACAAGCGAGTGGAGT+TGG | + | chr3_2:72654456-72654475 | Msa0423020:CDS | 50.0% | |
| ! | GTTTTCCCGCCGTTTAGTTG+TGG | + | chr3_2:72654723-72654742 | Msa0423020:intron | 50.0% |
| TGTGTCCACAACTAAACGGC+GGG | - | chr3_2:72654731-72654750 | None:intergenic | 50.0% | |
| GAAGCCGTGAAGTACGTAGT+TGG | - | chr3_2:72655705-72655724 | None:intergenic | 50.0% | |
| AGTGTGCTAACCTGTGCTAC+GGG | + | chr3_2:72656641-72656660 | Msa0423020:intron | 50.0% | |
| TTTGATGCCGAACAATGGGC+AGG | + | chr3_2:72657719-72657738 | Msa0423020:CDS | 50.0% | |
| ATCTCATGGTTGGAGCTTCC+TGG | + | chr3_2:72657752-72657771 | Msa0423020:CDS | 50.0% | |
| ! | TTGACTGGTCACAGTCTAGG+TGG | + | chr3_2:72657944-72657963 | Msa0423020:CDS | 50.0% |
| GGAGCTTCACTATGGTGTCT+AGG | + | chr3_2:72658467-72658486 | Msa0423020:CDS | 50.0% | |
| GACCTGAGTATCAAGAGGGA+TGG | + | chr3_2:72658494-72658513 | Msa0423020:CDS | 50.0% | |
| ACCCATCCCTCTTGATACTC+AGG | - | chr3_2:72658499-72658518 | None:intergenic | 50.0% | |
| !! | CTTGTTGGCTTACTAGTGCC+TGG | + | chr3_2:72658535-72658554 | Msa0423020:CDS | 50.0% |
| TTGTGGCATGCGGTGACTAC+TGG | + | chr3_2:72654968-72654987 | Msa0423020:CDS | 55.0% | |
| GCATGCGGTGACTACTGGAA+TGG | + | chr3_2:72654973-72654992 | Msa0423020:CDS | 55.0% | |
| TTGATTGGGGTGACCCTGGT+TGG | - | chr3_2:72656111-72656130 | None:intergenic | 55.0% | |
| CACTTTGATTGGGGTGACCC+TGG | - | chr3_2:72656115-72656134 | None:intergenic | 55.0% | |
| CAGGGTCACCCCAATCAAAG+TGG | + | chr3_2:72656113-72656132 | Msa0423020:intron | 55.0% | |
| GTGTGCTAACCTGTGCTACG+GGG | + | chr3_2:72656642-72656661 | Msa0423020:intron | 55.0% | |
| CTCTCCAAATTGCGGGTACG+AGG | + | chr3_2:72657513-72657532 | Msa0423020:intron | 55.0% | |
| TCGTCCTCGTACCCGCAATT+TGG | - | chr3_2:72657520-72657539 | None:intergenic | 55.0% | |
| TGGTTGGAGCTTCCTGGACT+TGG | + | chr3_2:72657758-72657777 | Msa0423020:CDS | 55.0% | |
| CACATGTCACCCCGTAGCAC+AGG | - | chr3_2:72656654-72656673 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_2 | gene | 72653608 | 72658630 | 72653608 | ID=Msa0423020;Name=Msa0423020 |
| chr3_2 | mRNA | 72653608 | 72658630 | 72653608 | ID=Msa0423020-mRNA-1;Parent=Msa0423020;Name=Msa0423020-mRNA-1;_AED=0.09;_eAED=0.09;_QI=0|0|0|1|1|1|5|0|455 |
| chr3_2 | exon | 72653608 | 72653884 | 72653608 | ID=Msa0423020-mRNA-1:exon:17954;Parent=Msa0423020-mRNA-1 |
| chr3_2 | exon | 72654404 | 72654594 | 72654404 | ID=Msa0423020-mRNA-1:exon:17955;Parent=Msa0423020-mRNA-1 |
| chr3_2 | exon | 72654961 | 72654994 | 72654961 | ID=Msa0423020-mRNA-1:exon:17956;Parent=Msa0423020-mRNA-1 |
| chr3_2 | exon | 72657624 | 72658240 | 72657624 | ID=Msa0423020-mRNA-1:exon:17957;Parent=Msa0423020-mRNA-1 |
| chr3_2 | exon | 72658382 | 72658630 | 72658382 | ID=Msa0423020-mRNA-1:exon:17958;Parent=Msa0423020-mRNA-1 |
| chr3_2 | CDS | 72653608 | 72653884 | 72653608 | ID=Msa0423020-mRNA-1:cds;Parent=Msa0423020-mRNA-1 |
| chr3_2 | CDS | 72654404 | 72654594 | 72654404 | ID=Msa0423020-mRNA-1:cds;Parent=Msa0423020-mRNA-1 |
| chr3_2 | CDS | 72654961 | 72654994 | 72654961 | ID=Msa0423020-mRNA-1:cds;Parent=Msa0423020-mRNA-1 |
| chr3_2 | CDS | 72657624 | 72658240 | 72657624 | ID=Msa0423020-mRNA-1:cds;Parent=Msa0423020-mRNA-1 |
| chr3_2 | CDS | 72658382 | 72658630 | 72658382 | ID=Msa0423020-mRNA-1:cds;Parent=Msa0423020-mRNA-1 |
| Gene Sequence |
| Protein sequence |
