Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0062860 | XP_024641248.2 | 70.426 | 399 | 86 | 1 | 1 | 367 | 358 | 756 | 0.0 | 594 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0062860 | sp|Q9SY66|FRS11_ARATH | 46.552 | 290 | 153 | 2 | 2 | 290 | 355 | 643 | 8.43e-89 | 284 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0062860 | A0A396JX52 | 70.426 | 399 | 86 | 1 | 1 | 367 | 358 | 756 | 0.0 | 594 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0018650 | Msa0062860 | 0.807134 | 5.863051e-50 | -8.615850e-47 |
| Msa0028700 | Msa0062860 | 0.812532 | 4.043181e-51 | -8.615850e-47 |
| Msa0032330 | Msa0062860 | 0.811198 | 7.894966e-51 | -8.615850e-47 |
| Msa0037880 | Msa0062860 | 0.803967 | 2.707105e-49 | -8.615850e-47 |
| Msa0062860 | Msa0105070 | 0.808926 | 2.436059e-50 | -8.615850e-47 |
| Msa0062860 | Msa0131770 | 0.824911 | 6.245681e-54 | -8.615850e-47 |
| Msa0062860 | Msa0158480 | 0.809763 | 1.610926e-50 | -8.615850e-47 |
| Msa0062860 | Msa0178960 | 0.884781 | 1.429834e-71 | -8.615850e-47 |
| Msa0062860 | Msa0178970 | 0.881338 | 2.607280e-70 | -8.615850e-47 |
| Msa0062860 | Msa0180500 | 0.828463 | 8.865892e-55 | -8.615850e-47 |
| Msa0062860 | Msa0182740 | 0.802501 | 5.444831e-49 | -8.615850e-47 |
| Msa0062860 | Msa0205510 | 0.814263 | 1.683787e-51 | -8.615850e-47 |
| Msa0062860 | Msa0208090 | 0.801995 | 6.921373e-49 | -8.615850e-47 |
| Msa0062860 | Msa0215320 | -0.809858 | 1.537214e-50 | -8.615850e-47 |
| Msa0062860 | Msa0223010 | 0.816189 | 6.286223e-52 | -8.615850e-47 |
| Msa0062860 | Msa0231000 | 0.803422 | 3.512299e-49 | -8.615850e-47 |
| Msa0062860 | Msa0233300 | 0.835305 | 1.813452e-56 | -8.615850e-47 |
| Msa0062860 | Msa0251320 | 0.819881 | 9.201663e-53 | -8.615850e-47 |
| Msa0062860 | Msa0278110 | 0.808055 | 3.736566e-50 | -8.615850e-47 |
| Msa0062860 | Msa0317290 | 0.804822 | 1.796001e-49 | -8.615850e-47 |
| Msa0062860 | Msa0319170 | 0.818132 | 2.299582e-52 | -8.615850e-47 |
| Msa0062860 | Msa0329190 | 0.815944 | 7.129514e-52 | -8.615850e-47 |
| Msa0062860 | Msa0337900 | 0.801091 | 1.060161e-48 | -8.615850e-47 |
| Msa0062860 | Msa0339620 | 0.817473 | 3.238278e-52 | -8.615850e-47 |
| Msa0062860 | Msa0340450 | 0.813205 | 2.879130e-51 | -8.615850e-47 |
| Msa0062860 | Msa0344910 | 0.822151 | 2.762067e-53 | -8.615850e-47 |
| Msa0062860 | Msa0344980 | 0.809057 | 2.283147e-50 | -8.615850e-47 |
| Msa0062860 | Msa0350990 | 0.803686 | 3.096796e-49 | -8.615850e-47 |
| Msa0062860 | Msa0351030 | 0.802833 | 4.651115e-49 | -8.615850e-47 |
| Msa0062860 | Msa0359030 | 0.811801 | 5.838700e-51 | -8.615850e-47 |
| Msa0062860 | Msa0402290 | 0.802125 | 6.506269e-49 | -8.615850e-47 |
| Msa0062860 | Msa0416650 | 0.805949 | 1.042711e-49 | -8.615850e-47 |
| Msa0062860 | Msa0424320 | 0.812980 | 3.226174e-51 | -8.615850e-47 |
| Msa0062860 | Msa0431690 | 0.871913 | 4.756380e-67 | -8.615850e-47 |
| Msa0062860 | Msa0466120 | 0.805219 | 1.483828e-49 | -8.615850e-47 |
| Msa0062860 | Msa0479340 | 0.810815 | 9.555106e-51 | -8.615850e-47 |
| Msa0062860 | Msa0512750 | 0.805039 | 1.617775e-49 | -8.615850e-47 |
| Msa0062860 | Msa0512900 | 0.803654 | 3.143812e-49 | -8.615850e-47 |
| Msa0062860 | Msa0516750 | 0.817422 | 3.324953e-52 | -8.615850e-47 |
| Msa0062860 | Msa0519000 | 0.800088 | 1.698180e-48 | -8.615850e-47 |
| Msa0062860 | Msa0523940 | 0.819338 | 1.224057e-52 | -8.615850e-47 |
| Msa0062860 | Msa0530940 | 0.802336 | 5.887553e-49 | -8.615850e-47 |
| Msa0062860 | Msa0532350 | 0.804829 | 1.789945e-49 | -8.615850e-47 |
| Msa0062860 | Msa0562440 | 0.807109 | 5.934528e-50 | -8.615850e-47 |
| Msa0062860 | Msa0604350 | 0.809522 | 1.815238e-50 | -8.615850e-47 |
| Msa0062860 | Msa0607540 | 0.808214 | 3.456612e-50 | -8.615850e-47 |
| Msa0062860 | Msa0620960 | 0.811159 | 8.049720e-51 | -8.615850e-47 |
| Msa0062860 | Msa0636170 | 0.811874 | 5.627802e-51 | -8.615850e-47 |
| Msa0062860 | Msa0637070 | 0.809746 | 1.624508e-50 | -8.615850e-47 |
| Msa0062860 | Msa0650630 | 0.802541 | 5.342277e-49 | -8.615850e-47 |
| Msa0062860 | Msa0661870 | 0.809135 | 2.197167e-50 | -8.615850e-47 |
| Msa0062860 | Msa0663240 | 0.810201 | 1.296839e-50 | -8.615850e-47 |
| Msa0062860 | Msa0673450 | 0.815216 | 1.035681e-51 | -8.615850e-47 |
| Msa0062860 | Msa0673460 | 0.812009 | 5.259629e-51 | -8.615850e-47 |
| Msa0062860 | Msa0676080 | 0.808218 | 3.449931e-50 | -8.615850e-47 |
| Msa0062860 | Msa0687070 | 0.800764 | 1.236821e-48 | -8.615850e-47 |
| Msa0062860 | Msa0688480 | 0.814083 | 1.845062e-51 | -8.615850e-47 |
| Msa0062860 | Msa0701010 | 0.822229 | 2.649092e-53 | -8.615850e-47 |
| Msa0062860 | Msa0725850 | 0.813955 | 1.969344e-51 | -8.615850e-47 |
| Msa0062860 | Msa0738500 | 0.816234 | 6.142675e-52 | -8.615850e-47 |
| Msa0062860 | Msa0743720 | 0.817884 | 2.616078e-52 | -8.615850e-47 |
| Msa0062860 | Msa0745060 | 0.800201 | 1.610466e-48 | -8.615850e-47 |
| Msa0062860 | Msa0766630 | 0.809721 | 1.645145e-50 | -8.615850e-47 |
| Msa0062860 | Msa0768290 | 0.800050 | 1.728589e-48 | -8.615850e-47 |
| Msa0062860 | Msa0768310 | 0.811690 | 6.170514e-51 | -8.615850e-47 |
| Msa0062860 | Msa0771720 | 0.803246 | 3.820637e-49 | -8.615850e-47 |
| Msa0062860 | Msa0777230 | 0.801561 | 8.494664e-49 | -8.615850e-47 |
| Msa0062860 | Msa0784290 | 0.801189 | 1.012342e-48 | -8.615850e-47 |
| Msa0062860 | Msa0808080 | 0.810264 | 1.256615e-50 | -8.615850e-47 |
| Msa0062860 | Msa0810220 | 0.806690 | 7.276816e-50 | -8.615850e-47 |
| Msa0062860 | Msa0820850 | 0.814341 | 1.618237e-51 | -8.615850e-47 |
| Msa0062860 | Msa0824590 | 0.806089 | 9.742383e-50 | -8.615850e-47 |
| Msa0062860 | Msa0828940 | 0.811648 | 6.303730e-51 | -8.615850e-47 |
| Msa0062860 | Msa0842650 | 0.823048 | 1.708582e-53 | -8.615850e-47 |
| Msa0062860 | Msa0845930 | 0.814986 | 1.165079e-51 | -8.615850e-47 |
| Msa0062860 | Msa0846330 | 0.803601 | 3.224347e-49 | -8.615850e-47 |
| Msa0062860 | Msa0849030 | 0.840715 | 7.358989e-58 | -8.615850e-47 |
| Msa0062860 | Msa0861130 | 0.814947 | 1.188313e-51 | -8.615850e-47 |
| Msa0062860 | Msa0877250 | 0.844426 | 7.616496e-59 | -8.615850e-47 |
| Msa0062860 | Msa0897880 | 0.808746 | 2.661497e-50 | -8.615850e-47 |
| Msa0062860 | Msa0898380 | 0.806528 | 7.872869e-50 | -8.615850e-47 |
| Msa0062860 | Msa0899430 | 0.814423 | 1.552217e-51 | -8.615850e-47 |
| Msa0062860 | Msa0899450 | 0.817416 | 3.335900e-52 | -8.615850e-47 |
| Msa0062860 | Msa0907070 | 0.833742 | 4.476914e-56 | -8.615850e-47 |
| Msa0062860 | Msa0907260 | 0.824654 | 7.180430e-54 | -8.615850e-47 |
| Msa0062860 | Msa0917880 | 0.855128 | 7.767011e-62 | -8.615850e-47 |
| Msa0062860 | Msa0927380 | 0.809467 | 1.864998e-50 | -8.615850e-47 |
| Msa0062860 | Msa0933100 | 0.804105 | 2.533629e-49 | -8.615850e-47 |
| Msa0062860 | Msa0946690 | -0.809760 | 1.613910e-50 | -8.615850e-47 |
| Msa0062860 | Msa0953120 | 0.846230 | 2.474704e-59 | -8.615850e-47 |
| Msa0062860 | Msa0954910 | 0.811097 | 8.301901e-51 | -8.615850e-47 |
| Msa0062860 | Msa0956270 | 0.821129 | 4.757725e-53 | -8.615850e-47 |
| Msa0062860 | Msa0958550 | 0.815500 | 8.953270e-52 | -8.615850e-47 |
| Msa0062860 | Msa0964900 | 0.803607 | 3.215660e-49 | -8.615850e-47 |
| Msa0062860 | Msa0966750 | 0.807192 | 5.698258e-50 | -8.615850e-47 |
| Msa0062860 | Msa0969520 | 0.815640 | 8.335699e-52 | -8.615850e-47 |
| Msa0062860 | Msa0980090 | 0.823134 | 1.631003e-53 | -8.615850e-47 |
| Msa0062860 | Msa0991820 | 0.802521 | 5.392871e-49 | -8.615850e-47 |
| Msa0062860 | Msa0991830 | 0.809305 | 2.020367e-50 | -8.615850e-47 |
| Msa0062860 | Msa0998690 | 0.811480 | 6.854269e-51 | -8.615850e-47 |
| Msa0062860 | Msa1000900 | 0.801435 | 9.015865e-49 | -8.615850e-47 |
| Msa0062860 | Msa1002310 | 0.802087 | 6.625474e-49 | -8.615850e-47 |
| Msa0062860 | Msa1014540 | 0.846631 | 1.923854e-59 | -8.615850e-47 |
| Msa0062860 | Msa1028230 | 0.806886 | 6.616034e-50 | -8.615850e-47 |
| Msa0062860 | Msa1030970 | 0.806938 | 6.451952e-50 | -8.615850e-47 |
| Msa0062860 | Msa1039800 | 0.811465 | 6.906671e-51 | -8.615850e-47 |
| Msa0062860 | Msa1071110 | 0.800038 | 1.738109e-48 | -8.615850e-47 |
| Msa0062860 | Msa1075220 | -0.801700 | 7.958061e-49 | -8.615850e-47 |
| Msa0062860 | Msa1082500 | 0.804372 | 2.230114e-49 | -8.615850e-47 |
| Msa0062860 | Msa1082580 | 0.816619 | 5.036611e-52 | -8.615850e-47 |
| Msa0062860 | Msa1085740 | 0.847700 | 9.798894e-60 | -8.615850e-47 |
| Msa0062860 | Msa1092990 | 0.815365 | 9.595246e-52 | -8.615850e-47 |
| Msa0062860 | Msa1100050 | 0.802791 | 4.744936e-49 | -8.615850e-47 |
| Msa0062860 | Msa1136090 | 0.833674 | 4.655663e-56 | -8.615850e-47 |
| Msa0062860 | Msa1156020 | 0.870363 | 1.544630e-66 | -8.615850e-47 |
| Msa0062860 | Msa1162550 | -0.807213 | 5.640254e-50 | -8.615850e-47 |
| Msa0062860 | Msa1174040 | 0.837739 | 4.350388e-57 | -8.615850e-47 |
| Msa0062860 | Msa1195190 | 0.813353 | 2.671586e-51 | -8.615850e-47 |
| Msa0062860 | Msa1205130 | 0.803710 | 3.060854e-49 | -8.615850e-47 |
| Msa0062860 | Msa1233890 | 0.801557 | 8.513954e-49 | -8.615850e-47 |
| Msa0062860 | Msa1244250 | 0.828701 | 7.768395e-55 | -8.615850e-47 |
| Msa0062860 | Msa1249490 | 0.830261 | 3.243610e-55 | -8.615850e-47 |
| Msa0062860 | Msa1269670 | 0.801351 | 9.380365e-49 | -8.615850e-47 |
| Msa0062860 | Msa1284680 | 0.817377 | 3.403515e-52 | -8.615850e-47 |
| Msa0062860 | Msa1297210 | 0.805789 | 1.126554e-49 | -8.615850e-47 |
| Msa0062860 | Msa1306850 | 0.806618 | 7.535580e-50 | -8.615850e-47 |
| Msa0062860 | Msa1344130 | 0.806387 | 8.430231e-50 | -8.615850e-47 |
| Msa0062860 | Msa1348950 | 0.824916 | 6.227788e-54 | -8.615850e-47 |
| Msa0062860 | Msa1359040 | 0.801358 | 9.350839e-49 | -8.615850e-47 |
| Msa0062860 | Msa1362880 | 0.806655 | 7.401972e-50 | -8.615850e-47 |
| Msa0062860 | Msa1372760 | 0.808699 | 2.724440e-50 | -8.615850e-47 |
| Msa0062860 | Msa1393040 | 0.804853 | 1.769205e-49 | -8.615850e-47 |
| Msa0062860 | Msa1402790 | 0.816366 | 5.740169e-52 | -8.615850e-47 |
| Msa0062860 | Msa1411020 | 0.814399 | 1.571845e-51 | -8.615850e-47 |
| Msa0062860 | Msa1420490 | 0.803242 | 3.827888e-49 | -8.615850e-47 |
| Msa0062860 | Msa1423390 | 0.805226 | 1.478977e-49 | -8.615850e-47 |
| Msa0062860 | Msa1424290 | 0.811613 | 6.415519e-51 | -8.615850e-47 |
| Msa0062860 | Msa1427230 | 0.822407 | 2.408608e-53 | -8.615850e-47 |
| Msa0062860 | Msa1434350 | 0.815559 | 8.688250e-52 | -8.615850e-47 |
| Msa0062860 | Msa1439320 | 0.819858 | 9.311651e-53 | -8.615850e-47 |
| Msa0062860 | Msa1440370 | 0.804287 | 2.322328e-49 | -8.615850e-47 |
| Msa0062860 | Msa1440810 | 0.805410 | 1.352948e-49 | -8.615850e-47 |
| Msa0062860 | Msa1451620 | -0.827851 | 1.244757e-54 | -8.615850e-47 |
| Msa0062860 | Msa1460830 | 0.825418 | 4.739434e-54 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0062860 | MtrunA17_Chr1g0198761 | 70.426 | 399 | 86 | 1 | 1 | 367 | 358 | 756 | 0.0 | 594 |
| Msa0062860 | MtrunA17_Chr2g0276841 | 47.945 | 292 | 146 | 3 | 2 | 290 | 377 | 665 | 2.07e-90 | 286 |
| Msa0062860 | MtrunA17_Chr2g0294841 | 36.224 | 392 | 202 | 4 | 1 | 344 | 354 | 745 | 1.52e-81 | 264 |
| Msa0062860 | MtrunA17_Chr2g0290391 | 48.276 | 261 | 129 | 2 | 2 | 262 | 366 | 620 | 6.16e-79 | 255 |
| Msa0062860 | MtrunA17_Chr5g0431001 | 97.273 | 110 | 3 | 0 | 2 | 111 | 373 | 482 | 5.17e-73 | 235 |
| Msa0062860 | MtrunA17_Chr5g0430921 | 97.260 | 73 | 2 | 0 | 289 | 361 | 13 | 85 | 1.65e-45 | 150 |
| Msa0062860 | MtrunA17_Chr3g0080351 | 29.457 | 258 | 177 | 4 | 3 | 256 | 368 | 624 | 8.19e-34 | 132 |
| Msa0062860 | MtrunA17_Chr5g0448761 | 31.636 | 275 | 168 | 6 | 3 | 263 | 369 | 637 | 2.59e-33 | 131 |
| Msa0062860 | MtrunA17_Chr1g0202341 | 28.475 | 295 | 203 | 4 | 3 | 290 | 353 | 646 | 9.80e-33 | 129 |
| Msa0062860 | MtrunA17_Chr2g0329031 | 28.571 | 252 | 174 | 4 | 3 | 250 | 307 | 556 | 1.07e-32 | 129 |
| Msa0062860 | MtrunA17_Chr2g0296781 | 29.677 | 310 | 196 | 8 | 3 | 296 | 295 | 598 | 3.84e-29 | 119 |
| Msa0062860 | MtrunA17_Chr6g0477261 | 29.032 | 310 | 198 | 8 | 3 | 296 | 184 | 487 | 3.11e-28 | 116 |
| Msa0062860 | MtrunA17_Chr1g0207551 | 28.958 | 259 | 177 | 5 | 3 | 256 | 334 | 590 | 1.16e-26 | 111 |
| Msa0062860 | MtrunA17_Chr1g0196541 | 29.658 | 263 | 168 | 6 | 3 | 252 | 295 | 553 | 4.18e-25 | 107 |
| Msa0062860 | MtrunA17_Chr5g0448511 | 27.273 | 253 | 178 | 3 | 3 | 250 | 141 | 392 | 2.10e-24 | 104 |
| Msa0062860 | MtrunA17_Chr5g0441581 | 27.203 | 261 | 176 | 5 | 3 | 252 | 323 | 580 | 2.67e-24 | 104 |
| Msa0062860 | MtrunA17_Chr8g0363841 | 26.370 | 292 | 182 | 9 | 3 | 269 | 320 | 603 | 4.06e-22 | 98.2 |
| Msa0062860 | MtrunA17_Chr5g0440451 | 27.309 | 249 | 170 | 5 | 34 | 277 | 380 | 622 | 5.84e-22 | 97.8 |
| Msa0062860 | MtrunA17_Chr6g0458391 | 25.097 | 259 | 187 | 4 | 3 | 256 | 510 | 766 | 5.97e-21 | 94.7 |
| Msa0062860 | MtrunA17_Chr2g0324011 | 27.308 | 260 | 177 | 5 | 3 | 254 | 312 | 567 | 8.69e-21 | 94.0 |
| Msa0062860 | MtrunA17_Chr3g0082121 | 27.626 | 257 | 180 | 6 | 3 | 256 | 338 | 591 | 5.76e-20 | 91.7 |
| Msa0062860 | MtrunA17_Chr2g0287061 | 25.862 | 290 | 190 | 7 | 3 | 286 | 450 | 720 | 8.48e-20 | 91.3 |
| Msa0062860 | MtrunA17_Chr2g0291581 | 27.636 | 275 | 161 | 6 | 3 | 253 | 359 | 619 | 1.08e-19 | 90.9 |
| Msa0062860 | MtrunA17_Chr1g0203721 | 22.692 | 260 | 192 | 3 | 3 | 256 | 368 | 624 | 3.60e-19 | 89.4 |
| Msa0062860 | MtrunA17_Chr2g0308841 | 26.540 | 211 | 150 | 3 | 47 | 252 | 14 | 224 | 3.10e-18 | 83.6 |
| Msa0062860 | MtrunA17_Chr1g0203051 | 25.296 | 253 | 165 | 6 | 3 | 243 | 382 | 622 | 3.38e-18 | 86.3 |
| Msa0062860 | MtrunA17_Chr3g0118611 | 27.027 | 222 | 155 | 4 | 34 | 250 | 277 | 496 | 1.16e-17 | 84.7 |
| Msa0062860 | MtrunA17_Chr2g0287651 | 23.759 | 282 | 198 | 6 | 3 | 274 | 380 | 654 | 1.83e-14 | 75.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0062860 | AT1G10240.2 | 46.552 | 290 | 153 | 2 | 2 | 290 | 355 | 643 | 8.57e-90 | 284 |
| Msa0062860 | AT1G10240.1 | 46.552 | 290 | 153 | 2 | 2 | 290 | 355 | 643 | 8.57e-90 | 284 |
| Msa0062860 | AT5G28530.5 | 36.392 | 316 | 189 | 3 | 2 | 316 | 307 | 611 | 4.67e-64 | 215 |
| Msa0062860 | AT5G28530.4 | 36.709 | 316 | 192 | 3 | 2 | 316 | 307 | 615 | 5.18e-64 | 215 |
| Msa0062860 | AT5G28530.1 | 36.709 | 316 | 192 | 3 | 2 | 316 | 370 | 678 | 1.98e-63 | 214 |
| Msa0062860 | AT5G28530.3 | 36.392 | 316 | 189 | 3 | 2 | 316 | 370 | 674 | 2.59e-63 | 214 |
| Msa0062860 | AT5G28530.2 | 36.392 | 316 | 189 | 3 | 2 | 316 | 370 | 674 | 2.59e-63 | 214 |
| Msa0062860 | AT4G15090.1 | 30.350 | 257 | 172 | 5 | 3 | 254 | 354 | 608 | 1.80e-35 | 138 |
| Msa0062860 | AT4G15090.5 | 30.350 | 257 | 172 | 5 | 3 | 254 | 354 | 608 | 1.80e-35 | 138 |
| Msa0062860 | AT4G15090.3 | 30.350 | 257 | 172 | 5 | 3 | 254 | 354 | 608 | 1.80e-35 | 138 |
| Msa0062860 | AT4G15090.2 | 30.350 | 257 | 172 | 5 | 3 | 254 | 354 | 608 | 1.80e-35 | 138 |
| Msa0062860 | AT4G15090.4 | 30.350 | 257 | 172 | 5 | 3 | 254 | 354 | 608 | 1.80e-35 | 138 |
| Msa0062860 | AT4G38180.1 | 31.907 | 257 | 169 | 3 | 3 | 254 | 378 | 633 | 5.69e-35 | 136 |
| Msa0062860 | AT3G22170.2 | 28.405 | 257 | 177 | 4 | 3 | 254 | 363 | 617 | 7.42e-31 | 124 |
| Msa0062860 | AT3G22170.1 | 28.405 | 257 | 177 | 4 | 3 | 254 | 363 | 617 | 7.42e-31 | 124 |
| Msa0062860 | AT1G76320.3 | 26.071 | 280 | 202 | 3 | 3 | 279 | 291 | 568 | 6.83e-30 | 121 |
| Msa0062860 | AT1G76320.1 | 26.071 | 280 | 202 | 3 | 3 | 279 | 291 | 568 | 7.43e-30 | 121 |
| Msa0062860 | AT1G76320.4 | 26.071 | 280 | 202 | 3 | 3 | 279 | 291 | 568 | 7.43e-30 | 121 |
| Msa0062860 | AT1G76320.2 | 26.071 | 280 | 202 | 3 | 3 | 279 | 291 | 568 | 8.07e-30 | 121 |
| Msa0062860 | AT4G38170.1 | 28.793 | 323 | 206 | 10 | 34 | 339 | 173 | 488 | 1.39e-28 | 117 |
| Msa0062860 | AT2G32250.5 | 26.335 | 281 | 202 | 4 | 3 | 279 | 298 | 577 | 2.83e-27 | 114 |
| Msa0062860 | AT2G32250.6 | 26.335 | 281 | 202 | 4 | 3 | 279 | 298 | 577 | 3.53e-27 | 113 |
| Msa0062860 | AT2G32250.1 | 26.335 | 281 | 202 | 4 | 3 | 279 | 298 | 577 | 3.53e-27 | 113 |
| Msa0062860 | AT2G32250.3 | 26.335 | 281 | 202 | 4 | 3 | 279 | 298 | 577 | 3.53e-27 | 113 |
| Msa0062860 | AT2G32250.2 | 26.335 | 281 | 202 | 4 | 3 | 279 | 298 | 577 | 3.66e-27 | 113 |
| Msa0062860 | AT2G32250.4 | 26.335 | 281 | 202 | 4 | 3 | 279 | 298 | 577 | 3.66e-27 | 113 |
| Msa0062860 | AT2G32250.8 | 26.335 | 281 | 202 | 4 | 3 | 279 | 257 | 536 | 4.08e-27 | 113 |
| Msa0062860 | AT2G32250.7 | 26.335 | 281 | 202 | 4 | 3 | 279 | 257 | 536 | 4.32e-27 | 113 |
| Msa0062860 | AT5G18960.2 | 25.385 | 260 | 180 | 5 | 3 | 256 | 478 | 729 | 4.87e-22 | 98.2 |
| Msa0062860 | AT5G18960.1 | 25.385 | 260 | 180 | 5 | 3 | 256 | 478 | 729 | 4.87e-22 | 98.2 |
| Msa0062860 | AT3G06250.2 | 25.000 | 260 | 181 | 5 | 3 | 256 | 454 | 705 | 7.97e-22 | 97.8 |
| Msa0062860 | AT3G06250.1 | 25.000 | 260 | 181 | 5 | 3 | 256 | 454 | 705 | 7.97e-22 | 97.8 |
| Msa0062860 | AT3G06250.3 | 25.000 | 260 | 181 | 5 | 3 | 256 | 454 | 705 | 7.97e-22 | 97.8 |
| Msa0062860 | AT4G19990.1 | 25.676 | 296 | 200 | 9 | 3 | 287 | 245 | 531 | 3.59e-21 | 95.5 |
| Msa0062860 | AT4G19990.5 | 25.338 | 296 | 201 | 9 | 3 | 287 | 302 | 588 | 4.24e-21 | 95.5 |
| Msa0062860 | AT4G19990.3 | 25.676 | 296 | 200 | 9 | 3 | 287 | 302 | 588 | 5.10e-21 | 95.1 |
| Msa0062860 | AT4G19990.4 | 25.676 | 296 | 200 | 9 | 3 | 287 | 302 | 588 | 5.10e-21 | 95.1 |
| Msa0062860 | AT4G19990.6 | 24.904 | 261 | 183 | 6 | 3 | 254 | 302 | 558 | 5.37e-21 | 95.1 |
| Msa0062860 | AT4G19990.2 | 24.904 | 261 | 183 | 6 | 3 | 254 | 302 | 558 | 5.37e-21 | 95.1 |
| Msa0062860 | AT4G19990.7 | 25.676 | 296 | 200 | 9 | 3 | 287 | 316 | 602 | 5.70e-21 | 95.1 |
| Msa0062860 | AT1G52520.1 | 27.536 | 276 | 161 | 9 | 3 | 253 | 375 | 636 | 6.46e-21 | 94.7 |
| Msa0062860 | AT2G27110.3 | 26.459 | 257 | 178 | 7 | 31 | 279 | 207 | 460 | 1.51e-18 | 87.8 |
| Msa0062860 | AT2G27110.2 | 24.912 | 285 | 202 | 8 | 3 | 279 | 325 | 605 | 1.67e-18 | 87.8 |
| Msa0062860 | AT2G27110.1 | 24.912 | 285 | 202 | 8 | 3 | 279 | 325 | 605 | 1.67e-18 | 87.8 |
| Msa0062860 | AT1G80010.1 | 26.991 | 226 | 149 | 8 | 41 | 253 | 437 | 659 | 1.02e-13 | 73.2 |
Find 101 sgRNAs with CRISPR-Local
Find 164 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCTTTACCCATCGTAAATTT+TGG | 0.158198 | 1_2:-22718778 | Msa0062860:CDS |
| CCAATTAAAACTTACTTATT+AGG | 0.177601 | 1_2:+22717743 | None:intergenic |
| ATGAGATGCCTCTTGGAATA+TGG | 0.196486 | 1_2:-22719279 | Msa0062860:five_prime_UTR |
| TTCTCACAACCACGAGTTAT+TGG | 0.199264 | 1_2:-22719701 | Msa0062860:five_prime_UTR |
| TTTATTACATGACTAGATTT+TGG | 0.204090 | 1_2:+22718144 | None:intergenic |
| TGATCGGTAAGAATTGTTTA+TGG | 0.208897 | 1_2:+22719043 | None:intergenic |
| AACGTCACAGTCATCATTAT+TGG | 0.232373 | 1_2:+22717943 | None:intergenic |
| CTCATGTTGAAGCAACTTAA+AGG | 0.248230 | 1_2:+22718422 | None:intergenic |
| AAAATCTGTCAAACTTGTTT+TGG | 0.261322 | 1_2:+22718661 | None:intergenic |
| ATTCGTGCATATGAAGCTTT+TGG | 0.265394 | 1_2:-22719343 | Msa0062860:five_prime_UTR |
| TCGAATTAGAGACTGAAATT+TGG | 0.265855 | 1_2:+22718101 | None:intergenic |
| ACTCTTGCTATAAGACTTAC+AGG | 0.282092 | 1_2:+22719589 | None:intergenic |
| TTCCTTCGCATGGGCTATAA+AGG | 0.299718 | 1_2:-22719188 | Msa0062860:intron |
| GCAGCTTCAACCCCTCCTTT+TGG | 0.339248 | 1_2:+22717872 | None:intergenic |
| ATTCAATCATATAGTGGTAT+TGG | 0.341059 | 1_2:-22719499 | Msa0062860:five_prime_UTR |
| AATTGATGAAAGTAACAAAT+TGG | 0.343540 | 1_2:-22719395 | Msa0062860:five_prime_UTR |
| CAAATTGGAGCATATTGTTT+GGG | 0.347369 | 1_2:-22719380 | Msa0062860:five_prime_UTR |
| CATCAATTGTGAATTCATAT+TGG | 0.348150 | 1_2:+22719410 | None:intergenic |
| GAGCATATTGTTTGGGCATT+TGG | 0.348974 | 1_2:-22719373 | Msa0062860:five_prime_UTR |
| ACAAATTGGAGCATATTGTT+TGG | 0.352856 | 1_2:-22719381 | Msa0062860:five_prime_UTR |
| ATGACAACGACGAGGCTTCT+TGG | 0.366012 | 1_2:+22717850 | None:intergenic |
| TCAGTCTCTAATTCGATGTT+TGG | 0.372448 | 1_2:-22718094 | Msa0062860:CDS |
| ATGGTCTCACAGTTTGGTTT+GGG | 0.387072 | 1_2:-22718824 | Msa0062860:CDS |
| AATGGTCTCACAGTTTGGTT+TGG | 0.398201 | 1_2:-22718825 | Msa0062860:CDS |
| GCAATGGCTTCTTTAATTGA+AGG | 0.406562 | 1_2:+22719016 | None:intergenic |
| ATACTAGTAATTACACAGTT+TGG | 0.415911 | 1_2:+22717110 | None:intergenic |
| ATCCATCGGGTGTTTATAAG+AGG | 0.417116 | 1_2:-22719887 | Msa0062860:five_prime_UTR |
| AGTGAATTAGACAGATGAAT+TGG | 0.418093 | 1_2:-22717537 | Msa0062860:three_prime_UTR |
| TTTGCTGGAATGACAACAAC+AGG | 0.418779 | 1_2:-22718728 | Msa0062860:CDS |
| GGTATTACTAAGAGAACAAT+TGG | 0.421136 | 1_2:-22719760 | Msa0062860:five_prime_UTR |
| GTCATCTTGAAATAGTGAAT+TGG | 0.425948 | 1_2:-22717628 | Msa0062860:three_prime_UTR |
| AAAGTAATGGTCTCACAGTT+TGG | 0.427267 | 1_2:-22718830 | Msa0062860:CDS |
| TGAGATGCCTCTTGGAATAT+GGG | 0.433904 | 1_2:-22719278 | Msa0062860:five_prime_UTR |
| TTGGGCCTTAGCTTATTTGA+AGG | 0.435274 | 1_2:-22718759 | Msa0062860:CDS |
| TATACGACCACCATCAACTT+TGG | 0.437731 | 1_2:+22718332 | None:intergenic |
| CTTTAAACATGAGTTTCATA+AGG | 0.439926 | 1_2:-22718894 | Msa0062860:CDS |
| TGATTAGTTCCACCACAATC+TGG | 0.446933 | 1_2:+22717824 | None:intergenic |
| AACCGTTATGAGATGCCTCT+TGG | 0.448749 | 1_2:-22719286 | Msa0062860:five_prime_UTR |
| CATGTAATAAACTGCAATGA+TGG | 0.453622 | 1_2:-22718132 | Msa0062860:CDS |
| GTTTGTCATCGTGGTGGTAT+TGG | 0.458689 | 1_2:-22719858 | Msa0062860:five_prime_UTR |
| ATGCGATCTTGATCAACAAT+TGG | 0.465554 | 1_2:+22719637 | None:intergenic |
| CTCACAGTTTGGTTTGGGTG+TGG | 0.468983 | 1_2:-22718819 | Msa0062860:CDS |
| ATAACGGTTTATTCTATATG+TGG | 0.472493 | 1_2:+22719300 | None:intergenic |
| TAGAAATCAAGCTGGAGAAA+AGG | 0.475356 | 1_2:-22718532 | Msa0062860:CDS |
| TATAAGACTTACAGGGCAAC+CGG | 0.479404 | 1_2:+22719597 | None:intergenic |
| TTGATAGGATCATGAAGGGT+TGG | 0.488246 | 1_2:-22717656 | Msa0062860:intron |
| AAAACAAAAGGTCGGCCAAA+AGG | 0.495104 | 1_2:-22717902 | Msa0062860:CDS |
| TAAGAGAACAATTGGCATTG+AGG | 0.495214 | 1_2:-22719752 | Msa0062860:five_prime_UTR |
| CAGTTTGATCAAAGCAGCTT+CGG | 0.497084 | 1_2:+22717514 | None:intergenic |
| TGAAGCAACTTAAAGGCATA+AGG | 0.499495 | 1_2:+22718429 | None:intergenic |
| AGAAGATTTCTTCCTTCGCA+TGG | 0.503824 | 1_2:-22719198 | Msa0062860:five_prime_UTR |
| CGTTGTCATGTTCCAGATTG+TGG | 0.504732 | 1_2:-22717836 | Msa0062860:CDS |
| AATTGTGAATTCATATTGGA+AGG | 0.507660 | 1_2:+22719414 | None:intergenic |
| CCAAAAGGATCAAGACCAAA+AGG | 0.514192 | 1_2:-22717887 | Msa0062860:CDS |
| CTTTCTCGTCTCCATCGAAA+AGG | 0.515070 | 1_2:+22718177 | None:intergenic |
| GTCAAAATTAGAAATCAAGC+TGG | 0.517568 | 1_2:-22718540 | Msa0062860:CDS |
| TTTAATTGAAGGATCTTGAT+CGG | 0.518039 | 1_2:+22719027 | None:intergenic |
| ATTGGAATGTTACGATAAGC+AGG | 0.522557 | 1_2:+22719655 | None:intergenic |
| GTTCTTTGATAGGATCATGA+AGG | 0.523187 | 1_2:-22717661 | Msa0062860:intron |
| ACCACGCAAAACTGTTGAAG+TGG | 0.526679 | 1_2:-22719832 | Msa0062860:five_prime_UTR |
| TGGGTTGGTGTTGATAATCA+TGG | 0.529258 | 1_2:-22719259 | Msa0062860:five_prime_UTR |
| ATACTATTATTGTCTAAAGC+CGG | 0.531055 | 1_2:-22719616 | Msa0062860:five_prime_UTR |
| TTCCAAGAGGCATCTCATAA+CGG | 0.531646 | 1_2:+22719284 | None:intergenic |
| CAACATCATACCAAAGTTGA+TGG | 0.538288 | 1_2:-22718342 | Msa0062860:CDS |
| AGGTAGTAATAAACTATAGC+AGG | 0.541866 | 1_2:+22717427 | None:intergenic |
| TGAACGAGAATGGAAAGTAA+TGG | 0.544871 | 1_2:-22718843 | Msa0062860:CDS |
| GAAGATTTCTTCCTTCGCAT+GGG | 0.556681 | 1_2:-22719197 | Msa0062860:five_prime_UTR |
| AAAGTCCTTCAAATAAGCTA+AGG | 0.560983 | 1_2:+22718754 | None:intergenic |
| GTTTGGCAATTCCATTGCAA+TGG | 0.567761 | 1_2:+22719000 | None:intergenic |
| ATGTGATTGTAGTGCAAAGA+TGG | 0.570079 | 1_2:-22719781 | Msa0062860:five_prime_UTR |
| GTAAAATGTGTTGTAATCTG+AGG | 0.570174 | 1_2:+22718483 | None:intergenic |
| GTGTCTGAAGAGAATCCATC+GGG | 0.572540 | 1_2:-22719900 | Msa0062860:five_prime_UTR |
| TTCTTTGATAGGATCATGAA+GGG | 0.576289 | 1_2:-22717660 | Msa0062860:intron |
| AATTAAAGAAGCCATTGCAA+TGG | 0.576797 | 1_2:-22719011 | Msa0062860:exon |
| CGAGTTATTGGATGACAAAG+AGG | 0.580002 | 1_2:-22719689 | Msa0062860:five_prime_UTR |
| TTGTCGCAAAGCTGTCAAGT+TGG | 0.589381 | 1_2:-22718949 | Msa0062860:CDS |
| TAGAGACTGAAATTTGGCAG+AGG | 0.595567 | 1_2:+22718107 | None:intergenic |
| TCATCATATCTCGAACCTAG+TGG | 0.597376 | 1_2:+22718917 | None:intergenic |
| AGGGAATTTGTTTGTCATCG+TGG | 0.598966 | 1_2:-22719867 | Msa0062860:five_prime_UTR |
| TCCCTCTTATAAACACCCGA+TGG | 0.599604 | 1_2:+22719885 | None:intergenic |
| TACCTTTATAGCCCATGCGA+AGG | 0.601051 | 1_2:+22719186 | None:intergenic |
| TGTGTCTGAAGAGAATCCAT+CGG | 0.605132 | 1_2:-22719901 | Msa0062860:five_prime_UTR |
| CTGTTGAAGTGGAAAATCAA+AGG | 0.606328 | 1_2:-22719821 | Msa0062860:five_prime_UTR |
| CTTTGTCATCCAATAACTCG+TGG | 0.606716 | 1_2:+22719692 | None:intergenic |
| AAGGATCAAGACCAAAAGGA+GGG | 0.611165 | 1_2:-22717883 | Msa0062860:CDS |
| CTAAGGCCCAAAATTTACGA+TGG | 0.615020 | 1_2:+22718771 | None:intergenic |
| TAAGGCCCAAAATTTACGAT+GGG | 0.615697 | 1_2:+22718772 | None:intergenic |
| ATGCCTCTTGGAATATGGGT+TGG | 0.616141 | 1_2:-22719274 | Msa0062860:five_prime_UTR |
| GAATTTGTTTGTCATCGTGG+TGG | 0.618777 | 1_2:-22719864 | Msa0062860:five_prime_UTR |
| TCCATCGGGTGTTTATAAGA+GGG | 0.625908 | 1_2:-22719886 | Msa0062860:five_prime_UTR |
| TACTTATTAGGAGATTGAGA+AGG | 0.635742 | 1_2:+22717755 | None:intergenic |
| TGTCATGTTCCAGATTGTGG+TGG | 0.637809 | 1_2:-22717833 | Msa0062860:CDS |
| AAAGGATCAAGACCAAAAGG+AGG | 0.655085 | 1_2:-22717884 | Msa0062860:CDS |
| GCAGCAATTGAAGCTGACAA+TGG | 0.657455 | 1_2:-22718378 | Msa0062860:CDS |
| ACACCAACCCATATTCCAAG+AGG | 0.676376 | 1_2:+22719271 | None:intergenic |
| AAGTTTGAAAGATCGAGATG+AGG | 0.682349 | 1_2:-22719437 | Msa0062860:five_prime_UTR |
| CATCATACCAAAGTTGATGG+TGG | 0.683172 | 1_2:-22718339 | Msa0062860:CDS |
| CTCTTGCTATAAGACTTACA+GGG | 0.696197 | 1_2:+22719590 | None:intergenic |
| AGGATCAAGACCAAAAGGAG+GGG | 0.696841 | 1_2:-22717882 | Msa0062860:CDS |
| ATAAGGTGTGAGTATAGACG+AGG | 0.720548 | 1_2:+22718446 | None:intergenic |
| TCTGGAACATGACAACGACG+AGG | 0.797744 | 1_2:+22717842 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATATTATCATAAAGATAAA+AGG | - | chr1_2:22719006-22719025 | Msa0062860:exon | 10.0% |
| !!! | TAATATTAACTGTATTTTTA+TGG | - | chr1_2:22719338-22719357 | Msa0062860:five_prime_UTR | 10.0% |
| !! | AAAAATATGTATGATAAATA+GGG | + | chr1_2:22719721-22719740 | None:intergenic | 10.0% |
| !!! | AATTTTATTCAATCATATAG+TGG | - | chr1_2:22717516-22717535 | Msa0062860:three_prime_UTR | 15.0% |
| !! | AAAATATGTATGATAAATAG+GGG | + | chr1_2:22719720-22719739 | None:intergenic | 15.0% |
| !! | GAAAAATATGTATGATAAAT+AGG | + | chr1_2:22719722-22719741 | None:intergenic | 15.0% |
| !! | AATTAGCAATAAATAACATA+TGG | - | chr1_2:22719745-22719764 | Msa0062860:five_prime_UTR | 15.0% |
| !!! | CTAATATCTTTTTCTAAGAA+TGG | + | chr1_2:22717495-22717514 | None:intergenic | 20.0% |
| !! | AATTGATGAAAGTAACAAAT+TGG | - | chr1_2:22717626-22717645 | Msa0062860:three_prime_UTR | 20.0% |
| !!! | CATGGAAATTCAATTTTTTT+TGG | - | chr1_2:22717780-22717799 | Msa0062860:CDS | 20.0% |
| !!! | TGATTGTTATATTTTTGTGT+AGG | - | chr1_2:22718447-22718466 | Msa0062860:CDS | 20.0% |
| !!! | TTTATTACATGACTAGATTT+TGG | + | chr1_2:22718880-22718899 | None:intergenic | 20.0% |
| !! | CCAATTAAAACTTACTTATT+AGG | + | chr1_2:22719281-22719300 | None:intergenic | 20.0% |
| !!! | CCTAATAAGTAAGTTTTAAT+TGG | - | chr1_2:22719278-22719297 | Msa0062860:five_prime_UTR | 20.0% |
| !!! | TATTTTTATGGTTCTTTGAT+AGG | - | chr1_2:22719350-22719369 | Msa0062860:five_prime_UTR | 20.0% |
| !!! | TGTGTAATTAGTATATTTTG+TGG | - | chr1_2:22719528-22719547 | Msa0062860:five_prime_UTR | 20.0% |
| !! | ATACTATTATTGTCTAAAGC+CGG | - | chr1_2:22717405-22717424 | Msa0062860:intron | 25.0% |
| ! | ATTCAATCATATAGTGGTAT+TGG | - | chr1_2:22717522-22717541 | Msa0062860:three_prime_UTR | 25.0% |
| ! | AATTGTGAATTCATATTGGA+AGG | + | chr1_2:22717610-22717629 | None:intergenic | 25.0% |
| ! | CATCAATTGTGAATTCATAT+TGG | + | chr1_2:22717614-22717633 | None:intergenic | 25.0% |
| ! | ATAACGGTTTATTCTATATG+TGG | + | chr1_2:22717724-22717743 | None:intergenic | 25.0% |
| ! | TTTAATTGAAGGATCTTGAT+CGG | + | chr1_2:22717997-22718016 | None:intergenic | 25.0% |
| ! | CTTTAAACATGAGTTTCATA+AGG | - | chr1_2:22718127-22718146 | Msa0062860:CDS | 25.0% |
| !!! | AAAATCTGTCAAACTTGTTT+TGG | + | chr1_2:22718363-22718382 | None:intergenic | 25.0% |
| !!! | TGTTATATTTTTGTGTAGGT+TGG | - | chr1_2:22718451-22718470 | Msa0062860:CDS | 25.0% |
| !! | TGTAAAGAGTTTCAATTTTC+AGG | - | chr1_2:22718751-22718770 | Msa0062860:CDS | 25.0% |
| !! | AATATTTTCTAACTCTCTTG+TGG | + | chr1_2:22718992-22719011 | None:intergenic | 25.0% |
| ! | TTGTTTCAAAAACAAAAGGT+CGG | - | chr1_2:22719111-22719130 | Msa0062860:intron | 25.0% |
| ! | TCCAAACAAAAAGAGAAAAA+TGG | - | chr1_2:22719235-22719254 | Msa0062860:five_prime_UTR | 25.0% |
| !!! | TCCATTTTTCTCTTTTTGTT+TGG | + | chr1_2:22719239-22719258 | None:intergenic | 25.0% |
| !! | TGTGTAATTAGTGAATTTTG+TGG | - | chr1_2:22719449-22719468 | Msa0062860:five_prime_UTR | 25.0% |
| !! | TCAAAAGGGTCTTATAATTA+GGG | + | chr1_2:22719624-22719643 | None:intergenic | 25.0% |
| ! | GACAAAGAAAATTCTCAAAA+GGG | + | chr1_2:22719638-22719657 | None:intergenic | 25.0% |
| ! | ATGTAGTTGAAAATAGCAAA+GGG | + | chr1_2:22719675-22719694 | None:intergenic | 25.0% |
| ! | AATGTAGTTGAAAATAGCAA+AGG | + | chr1_2:22719676-22719695 | None:intergenic | 25.0% |
| ! | ATACTAGTAATTACACAGTT+TGG | + | chr1_2:22719914-22719933 | None:intergenic | 25.0% |
| GGTATTACTAAGAGAACAAT+TGG | - | chr1_2:22717261-22717280 | Msa0062860:intron | 30.0% | |
| ! | AATTGGCATTGAGGAAAAAT+GGG | - | chr1_2:22717278-22717297 | Msa0062860:intron | 30.0% |
| CTTGAGTTAGAGAAAAAAAC+AGG | - | chr1_2:22717456-22717475 | Msa0062860:three_prime_UTR | 30.0% | |
| ACAAATTGGAGCATATTGTT+TGG | - | chr1_2:22717640-22717659 | Msa0062860:exon | 30.0% | |
| CAAATTGGAGCATATTGTTT+GGG | - | chr1_2:22717641-22717660 | Msa0062860:exon | 30.0% | |
| TGATCGGTAAGAATTGTTTA+TGG | + | chr1_2:22717981-22718000 | None:intergenic | 30.0% | |
| AATTAAAGAAGCCATTGCAA+TGG | - | chr1_2:22718010-22718029 | Msa0062860:intron | 30.0% | |
| ! | CAAAATGCATGTTTTGTGTT+TGG | + | chr1_2:22718041-22718060 | None:intergenic | 30.0% |
| ! | CAAAACATGCATTTTGCATA+TGG | - | chr1_2:22718045-22718064 | Msa0062860:intron | 30.0% |
| ! | TCTTTACCCATCGTAAATTT+TGG | - | chr1_2:22718243-22718262 | Msa0062860:CDS | 30.0% |
| ! | CTTTACCCATCGTAAATTTT+GGG | - | chr1_2:22718244-22718263 | Msa0062860:CDS | 30.0% |
| AAAGTCCTTCAAATAAGCTA+AGG | + | chr1_2:22718270-22718289 | None:intergenic | 30.0% | |
| !!! | TTGAAGGACTTTTTTTTTGC+TGG | - | chr1_2:22718278-22718297 | Msa0062860:CDS | 30.0% |
| GTCAAAATTAGAAATCAAGC+TGG | - | chr1_2:22718481-22718500 | Msa0062860:CDS | 30.0% | |
| GTAAAATGTGTTGTAATCTG+AGG | + | chr1_2:22718541-22718560 | None:intergenic | 30.0% | |
| !! | CGAAAAGGAAGATATTTTGA+TGG | + | chr1_2:22718832-22718851 | None:intergenic | 30.0% |
| ! | CAAAATATCTTCCTTTTCGA+TGG | - | chr1_2:22718833-22718852 | Msa0062860:CDS | 30.0% |
| CATGTAATAAACTGCAATGA+TGG | - | chr1_2:22718889-22718908 | Msa0062860:CDS | 30.0% | |
| TCGAATTAGAGACTGAAATT+TGG | + | chr1_2:22718923-22718942 | None:intergenic | 30.0% | |
| TCAAGAACATGTGATTGATT+TGG | - | chr1_2:22719043-22719062 | Msa0062860:five_prime_UTR | 30.0% | |
| !!! | CCTTTTGTTTTTGAAACAAC+AGG | + | chr1_2:22719110-22719129 | None:intergenic | 30.0% |
| !! | CCTGTTGTTTCAAAAACAAA+AGG | - | chr1_2:22719107-22719126 | Msa0062860:intron | 30.0% |
| TACTTATTAGGAGATTGAGA+AGG | + | chr1_2:22719269-22719288 | None:intergenic | 30.0% | |
| TTCTTTGATAGGATCATGAA+GGG | - | chr1_2:22719361-22719380 | Msa0062860:five_prime_UTR | 30.0% | |
| GTCATCTTGAAATAGTGAAT+TGG | - | chr1_2:22719393-22719412 | Msa0062860:five_prime_UTR | 30.0% | |
| AGTGAATTAGACAGATGAAT+TGG | - | chr1_2:22719484-22719503 | Msa0062860:five_prime_UTR | 30.0% | |
| AGGTAGTAATAAACTATAGC+AGG | + | chr1_2:22719597-22719616 | None:intergenic | 30.0% | |
| ! | CTCAAAAGGGTCTTATAATT+AGG | + | chr1_2:22719625-22719644 | None:intergenic | 30.0% |
| GGACAAAGAAAATTCTCAAA+AGG | + | chr1_2:22719639-22719658 | None:intergenic | 30.0% | |
| TGTAGTTGAAAATAGCAAAG+GGG | + | chr1_2:22719674-22719693 | None:intergenic | 30.0% | |
| AACTAATTCTCTCTCTCTTA+AGG | - | chr1_2:22719776-22719795 | Msa0062860:five_prime_UTR | 30.0% | |
| AATCACGAGAATTAAGAAAG+TGG | + | chr1_2:22719850-22719869 | None:intergenic | 30.0% | |
| !! | ATTCTCGTGATTTTAGCAAA+AGG | - | chr1_2:22719858-22719877 | Msa0062860:five_prime_UTR | 30.0% |
| !! | TTCTCGTGATTTTAGCAAAA+GGG | - | chr1_2:22719859-22719878 | Msa0062860:five_prime_UTR | 30.0% |
| ! | AGCAAAAGGGTCTTATATAT+AGG | - | chr1_2:22719872-22719891 | Msa0062860:five_prime_UTR | 30.0% |
| ! | GCAAAAGGGTCTTATATATA+GGG | - | chr1_2:22719873-22719892 | Msa0062860:five_prime_UTR | 30.0% |
| CTGTTGAAGTGGAAAATCAA+AGG | - | chr1_2:22717200-22717219 | Msa0062860:intron | 35.0% | |
| ATGTGATTGTAGTGCAAAGA+TGG | - | chr1_2:22717240-22717259 | Msa0062860:intron | 35.0% | |
| TAAGAGAACAATTGGCATTG+AGG | - | chr1_2:22717269-22717288 | Msa0062860:intron | 35.0% | |
| ! | CAATTGGCATTGAGGAAAAA+TGG | - | chr1_2:22717277-22717296 | Msa0062860:intron | 35.0% |
| ATTGGAATGTTACGATAAGC+AGG | + | chr1_2:22717369-22717388 | None:intergenic | 35.0% | |
| ATGCGATCTTGATCAACAAT+TGG | + | chr1_2:22717387-22717406 | None:intergenic | 35.0% | |
| ! | CTCTTGCTATAAGACTTACA+GGG | + | chr1_2:22717434-22717453 | None:intergenic | 35.0% |
| ! | ACTCTTGCTATAAGACTTAC+AGG | + | chr1_2:22717435-22717454 | None:intergenic | 35.0% |
| TTAGAGAAAAAAACAGGCAC+AGG | - | chr1_2:22717462-22717481 | Msa0062860:three_prime_UTR | 35.0% | |
| AAGTTTGAAAGATCGAGATG+AGG | - | chr1_2:22717584-22717603 | Msa0062860:three_prime_UTR | 35.0% | |
| ! | ATTCGTGCATATGAAGCTTT+TGG | - | chr1_2:22717678-22717697 | Msa0062860:intron | 35.0% |
| !! | AGTTTCCTAGCTTTTGTGAA+GGG | - | chr1_2:22717948-22717967 | Msa0062860:CDS | 35.0% |
| ! | ATTTTCCCTTCACAAAAGCT+AGG | + | chr1_2:22717956-22717975 | None:intergenic | 35.0% |
| GCAATGGCTTCTTTAATTGA+AGG | + | chr1_2:22718008-22718027 | None:intergenic | 35.0% | |
| !!! | AGTTGGTTTTCTTTTCCACT+AGG | - | chr1_2:22718089-22718108 | Msa0062860:CDS | 35.0% |
| ! | CAGATGATTTTGAACGAGAA+TGG | - | chr1_2:22718168-22718187 | Msa0062860:CDS | 35.0% |
| TGAACGAGAATGGAAAGTAA+TGG | - | chr1_2:22718178-22718197 | Msa0062860:CDS | 35.0% | |
| AAAGTAATGGTCTCACAGTT+TGG | - | chr1_2:22718191-22718210 | Msa0062860:CDS | 35.0% | |
| TAAGGCCCAAAATTTACGAT+GGG | + | chr1_2:22718252-22718271 | None:intergenic | 35.0% | |
| TAGAAATCAAGCTGGAGAAA+AGG | - | chr1_2:22718489-22718508 | Msa0062860:CDS | 35.0% | |
| ! | TGAAGCAACTTAAAGGCATA+AGG | + | chr1_2:22718595-22718614 | None:intergenic | 35.0% |
| CTCATGTTGAAGCAACTTAA+AGG | + | chr1_2:22718602-22718621 | None:intergenic | 35.0% | |
| CAACATCATACCAAAGTTGA+TGG | - | chr1_2:22718679-22718698 | Msa0062860:CDS | 35.0% | |
| TCAGTCTCTAATTCGATGTT+TGG | - | chr1_2:22718927-22718946 | Msa0062860:CDS | 35.0% | |
| ATCACATGTTCTTGAGTTTC+AGG | + | chr1_2:22719038-22719057 | None:intergenic | 35.0% | |
| !! | ACATGTGATTGATTTGGAAG+CGG | - | chr1_2:22719049-22719068 | Msa0062860:five_prime_UTR | 35.0% |
| AACGTCACAGTCATCATTAT+TGG | + | chr1_2:22719081-22719100 | None:intergenic | 35.0% | |
| GTTCTTTGATAGGATCATGA+AGG | - | chr1_2:22719360-22719379 | Msa0062860:five_prime_UTR | 35.0% | |
| ! | AAGGGTCTTATAATTAGGGA+CGG | + | chr1_2:22719620-22719639 | None:intergenic | 35.0% |
| ! | GCAAAGGGGTCTTATAAAAA+GGG | + | chr1_2:22719660-22719679 | None:intergenic | 35.0% |
| ! | AGCAAAGGGGTCTTATAAAA+AGG | + | chr1_2:22719661-22719680 | None:intergenic | 35.0% |
| ! | AAGGGTCTTATATATAGGGA+CGG | - | chr1_2:22719877-22719896 | Msa0062860:five_prime_UTR | 35.0% |
| TGTGTCTGAAGAGAATCCAT+CGG | - | chr1_2:22717120-22717139 | Msa0062860:three_prime_UTR | 40.0% | |
| ATCCATCGGGTGTTTATAAG+AGG | - | chr1_2:22717134-22717153 | Msa0062860:intron | 40.0% | |
| TCCATCGGGTGTTTATAAGA+GGG | - | chr1_2:22717135-22717154 | Msa0062860:intron | 40.0% | |
| ! | AGGGAATTTGTTTGTCATCG+TGG | - | chr1_2:22717154-22717173 | Msa0062860:intron | 40.0% |
| ! | GAATTTGTTTGTCATCGTGG+TGG | - | chr1_2:22717157-22717176 | Msa0062860:intron | 40.0% |
| TTCTCACAACCACGAGTTAT+TGG | - | chr1_2:22717320-22717339 | Msa0062860:intron | 40.0% | |
| CTTTGTCATCCAATAACTCG+TGG | + | chr1_2:22717332-22717351 | None:intergenic | 40.0% | |
| CGAGTTATTGGATGACAAAG+AGG | - | chr1_2:22717332-22717351 | Msa0062860:intron | 40.0% | |
| TATAAGACTTACAGGGCAAC+CGG | + | chr1_2:22717427-22717446 | None:intergenic | 40.0% | |
| GAGCATATTGTTTGGGCATT+TGG | - | chr1_2:22717648-22717667 | Msa0062860:exon | 40.0% | |
| !! | TTCCAAGAGGCATCTCATAA+CGG | + | chr1_2:22717740-22717759 | None:intergenic | 40.0% |
| ATGAGATGCCTCTTGGAATA+TGG | - | chr1_2:22717742-22717761 | Msa0062860:intron | 40.0% | |
| TGAGATGCCTCTTGGAATAT+GGG | - | chr1_2:22717743-22717762 | Msa0062860:intron | 40.0% | |
| !! | TGGGTTGGTGTTGATAATCA+TGG | - | chr1_2:22717762-22717781 | Msa0062860:CDS | 40.0% |
| AGAAGATTTCTTCCTTCGCA+TGG | - | chr1_2:22717823-22717842 | Msa0062860:CDS | 40.0% | |
| GAAGATTTCTTCCTTCGCAT+GGG | - | chr1_2:22717824-22717843 | Msa0062860:CDS | 40.0% | |
| !! | GAGTTTCCTAGCTTTTGTGA+AGG | - | chr1_2:22717947-22717966 | Msa0062860:CDS | 40.0% |
| GTTTGGCAATTCCATTGCAA+TGG | + | chr1_2:22718024-22718043 | None:intergenic | 40.0% | |
| TCATCATATCTCGAACCTAG+TGG | + | chr1_2:22718107-22718126 | None:intergenic | 40.0% | |
| AATGGTCTCACAGTTTGGTT+TGG | - | chr1_2:22718196-22718215 | Msa0062860:CDS | 40.0% | |
| ! | ATGGTCTCACAGTTTGGTTT+GGG | - | chr1_2:22718197-22718216 | Msa0062860:CDS | 40.0% |
| CTAAGGCCCAAAATTTACGA+TGG | + | chr1_2:22718253-22718272 | None:intergenic | 40.0% | |
| TTGGGCCTTAGCTTATTTGA+AGG | - | chr1_2:22718262-22718281 | Msa0062860:CDS | 40.0% | |
| TTTGCTGGAATGACAACAAC+AGG | - | chr1_2:22718293-22718312 | Msa0062860:CDS | 40.0% | |
| ATAAGGTGTGAGTATAGACG+AGG | + | chr1_2:22718578-22718597 | None:intergenic | 40.0% | |
| !! | CATCATACCAAAGTTGATGG+TGG | - | chr1_2:22718682-22718701 | Msa0062860:CDS | 40.0% |
| TATACGACCACCATCAACTT+TGG | + | chr1_2:22718692-22718711 | None:intergenic | 40.0% | |
| TAGAGACTGAAATTTGGCAG+AGG | + | chr1_2:22718917-22718936 | None:intergenic | 40.0% | |
| AAAGACAAGTGAACGAGAAC+AGG | - | chr1_2:22718963-22718982 | Msa0062860:CDS | 40.0% | |
| AAAACAAAAGGTCGGCCAAA+AGG | - | chr1_2:22719119-22719138 | Msa0062860:intron | 40.0% | |
| !!! | CCTTTTGGTCTTGATCCTTT+TGG | + | chr1_2:22719137-22719156 | None:intergenic | 40.0% |
| CCAAAAGGATCAAGACCAAA+AGG | - | chr1_2:22719134-22719153 | Msa0062860:intron | 40.0% | |
| AAAGGATCAAGACCAAAAGG+AGG | - | chr1_2:22719137-22719156 | Msa0062860:intron | 40.0% | |
| AAGGATCAAGACCAAAAGGA+GGG | - | chr1_2:22719138-22719157 | Msa0062860:intron | 40.0% | |
| ! | TGATTAGTTCCACCACAATC+TGG | + | chr1_2:22719200-22719219 | None:intergenic | 40.0% |
| TTGATAGGATCATGAAGGGT+TGG | - | chr1_2:22719365-22719384 | Msa0062860:five_prime_UTR | 40.0% | |
| CAGTTTGATCAAAGCAGCTT+CGG | + | chr1_2:22719510-22719529 | None:intergenic | 40.0% | |
| GTGTCTGAAGAGAATCCATC+GGG | - | chr1_2:22717121-22717140 | Msa0062860:three_prime_UTR | 45.0% | |
| TCCCTCTTATAAACACCCGA+TGG | + | chr1_2:22717139-22717158 | None:intergenic | 45.0% | |
| GTTTGTCATCGTGGTGGTAT+TGG | - | chr1_2:22717163-22717182 | Msa0062860:intron | 45.0% | |
| ACCACGCAAAACTGTTGAAG+TGG | - | chr1_2:22717189-22717208 | Msa0062860:intron | 45.0% | |
| ! | TCCACTTCAACAGTTTTGCG+TGG | + | chr1_2:22717193-22717212 | None:intergenic | 45.0% |
| ! | TGGCATTGAGGAAAAATGGG+TGG | - | chr1_2:22717281-22717300 | Msa0062860:intron | 45.0% |
| AACCGTTATGAGATGCCTCT+TGG | - | chr1_2:22717735-22717754 | Msa0062860:intron | 45.0% | |
| ATGCCTCTTGGAATATGGGT+TGG | - | chr1_2:22717747-22717766 | Msa0062860:intron | 45.0% | |
| ACACCAACCCATATTCCAAG+AGG | + | chr1_2:22717753-22717772 | None:intergenic | 45.0% | |
| ! | TTCCTTCGCATGGGCTATAA+AGG | - | chr1_2:22717833-22717852 | Msa0062860:CDS | 45.0% |
| TACCTTTATAGCCCATGCGA+AGG | + | chr1_2:22717838-22717857 | None:intergenic | 45.0% | |
| TTGTCGCAAAGCTGTCAAGT+TGG | - | chr1_2:22718072-22718091 | Msa0062860:intron | 45.0% | |
| GCAGCAATTGAAGCTGACAA+TGG | - | chr1_2:22718643-22718662 | Msa0062860:intron | 45.0% | |
| CTTTCTCGTCTCCATCGAAA+AGG | + | chr1_2:22718847-22718866 | None:intergenic | 45.0% | |
| AGGATCAAGACCAAAAGGAG+GGG | - | chr1_2:22719139-22719158 | Msa0062860:intron | 45.0% | |
| CGTTGTCATGTTCCAGATTG+TGG | - | chr1_2:22719185-22719204 | Msa0062860:intron | 45.0% | |
| TGTCATGTTCCAGATTGTGG+TGG | - | chr1_2:22719188-22719207 | Msa0062860:intron | 45.0% | |
| ! | GGTCTTATAATTAGGGACGG+AGG | + | chr1_2:22719617-22719636 | None:intergenic | 45.0% |
| ! | GGTCTTATATATAGGGACGG+AGG | - | chr1_2:22719880-22719899 | Msa0062860:five_prime_UTR | 45.0% |
| !! | CTCACAGTTTGGTTTGGGTG+TGG | - | chr1_2:22718202-22718221 | Msa0062860:CDS | 50.0% |
| ATGACAACGACGAGGCTTCT+TGG | + | chr1_2:22719174-22719193 | None:intergenic | 50.0% | |
| ! | TCTGGAACATGACAACGACG+AGG | + | chr1_2:22719182-22719201 | None:intergenic | 50.0% |
| ! | GCAGCTTCAACCCCTCCTTT+TGG | + | chr1_2:22719152-22719171 | None:intergenic | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_2 | gene | 22717088 | 22719955 | 22717088 | ID=Msa0062860;Name=Msa0062860 |
| chr1_2 | mRNA | 22717088 | 22719955 | 22717088 | ID=Msa0062860-mRNA-1;Parent=Msa0062860;Name=Msa0062860-mRNA-1;_AED=0.08;_eAED=0.08;_QI=848|0.8|0.66|1|0.4|0.5|6|265|367 |
| chr1_2 | exon | 22717088 | 22717141 | 22717088 | ID=Msa0062860-mRNA-1:exon:8343;Parent=Msa0062860-mRNA-1 |
| chr1_2 | exon | 22717439 | 22717671 | 22717439 | ID=Msa0062860-mRNA-1:exon:8342;Parent=Msa0062860-mRNA-1 |
| chr1_2 | exon | 22717758 | 22717974 | 22717758 | ID=Msa0062860-mRNA-1:exon:8341;Parent=Msa0062860-mRNA-1 |
| chr1_2 | exon | 22718073 | 22718574 | 22718073 | ID=Msa0062860-mRNA-1:exon:8340;Parent=Msa0062860-mRNA-1 |
| chr1_2 | exon | 22718652 | 22719095 | 22718652 | ID=Msa0062860-mRNA-1:exon:8339;Parent=Msa0062860-mRNA-1 |
| chr1_2 | exon | 22719189 | 22719955 | 22719189 | ID=Msa0062860-mRNA-1:exon:8338;Parent=Msa0062860-mRNA-1 |
| chr1_2 | five_prime_UTR | 22719189 | 22719955 | 22719189 | ID=Msa0062860-mRNA-1:five_prime_utr;Parent=Msa0062860-mRNA-1 |
| chr1_2 | five_prime_UTR | 22719015 | 22719095 | 22719015 | ID=Msa0062860-mRNA-1:five_prime_utr;Parent=Msa0062860-mRNA-1 |
| chr1_2 | CDS | 22718652 | 22719014 | 22718652 | ID=Msa0062860-mRNA-1:cds;Parent=Msa0062860-mRNA-1 |
| chr1_2 | CDS | 22718073 | 22718574 | 22718073 | ID=Msa0062860-mRNA-1:cds;Parent=Msa0062860-mRNA-1 |
| chr1_2 | CDS | 22717758 | 22717974 | 22717758 | ID=Msa0062860-mRNA-1:cds;Parent=Msa0062860-mRNA-1 |
| chr1_2 | CDS | 22717650 | 22717671 | 22717650 | ID=Msa0062860-mRNA-1:cds;Parent=Msa0062860-mRNA-1 |
| chr1_2 | three_prime_UTR | 22717439 | 22717649 | 22717439 | ID=Msa0062860-mRNA-1:three_prime_utr;Parent=Msa0062860-mRNA-1 |
| chr1_2 | three_prime_UTR | 22717088 | 22717141 | 22717088 | ID=Msa0062860-mRNA-1:three_prime_utr;Parent=Msa0062860-mRNA-1 |
| Gene Sequence |
| Protein sequence |
