Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0013750 | Msa0989060 | 0.818257 | 2.154311e-52 | -8.615850e-47 |
| Msa0014330 | Msa0989060 | 0.827425 | 1.575495e-54 | -8.615850e-47 |
| Msa0015750 | Msa0989060 | 0.853658 | 2.066358e-61 | -8.615850e-47 |
| Msa0016570 | Msa0989060 | 0.848763 | 4.982518e-60 | -8.615850e-47 |
| Msa0016580 | Msa0989060 | 0.847825 | 9.048997e-60 | -8.615850e-47 |
| Msa0092630 | Msa0989060 | 0.812114 | 4.989537e-51 | -8.615850e-47 |
| Msa0102070 | Msa0989060 | 0.878715 | 2.244471e-69 | -8.615850e-47 |
| Msa0110270 | Msa0989060 | 0.831531 | 1.583826e-55 | -8.615850e-47 |
| Msa0111510 | Msa0989060 | 0.821772 | 3.380617e-53 | -8.615850e-47 |
| Msa0604350 | Msa0989060 | 0.837889 | 3.980946e-57 | -8.615850e-47 |
| Msa0636170 | Msa0989060 | 0.863105 | 3.157311e-64 | -8.615850e-47 |
| Msa0639610 | Msa0989060 | 0.861143 | 1.261709e-63 | -8.615850e-47 |
| Msa0678930 | Msa0989060 | 0.812141 | 4.923286e-51 | -8.615850e-47 |
| Msa0689390 | Msa0989060 | 0.814932 | 1.197663e-51 | -8.615850e-47 |
| Msa0694370 | Msa0989060 | 0.855547 | 5.863840e-62 | -8.615850e-47 |
| Msa0725850 | Msa0989060 | 0.836785 | 7.636298e-57 | -8.615850e-47 |
| Msa0726140 | Msa0989060 | 0.899531 | 1.806607e-77 | -8.615850e-47 |
| Msa0729800 | Msa0989060 | 0.865707 | 4.856955e-65 | -8.615850e-47 |
| Msa0732310 | Msa0989060 | 0.807695 | 4.458329e-50 | -8.615850e-47 |
| Msa0732710 | Msa0989060 | 0.808025 | 3.792831e-50 | -8.615850e-47 |
| Msa0733290 | Msa0989060 | 0.851994 | 6.176216e-61 | -8.615850e-47 |
| Msa0735080 | Msa0989060 | 0.858042 | 1.080933e-62 | -8.615850e-47 |
| Msa0738490 | Msa0989060 | 0.816318 | 5.882936e-52 | -8.615850e-47 |
| Msa0741990 | Msa0989060 | 0.815126 | 1.084545e-51 | -8.615850e-47 |
| Msa0743810 | Msa0989060 | 0.930157 | 2.463260e-93 | -8.615850e-47 |
| Msa0745060 | Msa0989060 | 0.884471 | 1.864807e-71 | -8.615850e-47 |
| Msa0762360 | Msa0989060 | 0.812398 | 4.325386e-51 | -8.615850e-47 |
| Msa0766630 | Msa0989060 | 0.813130 | 2.990215e-51 | -8.615850e-47 |
| Msa0767720 | Msa0989060 | 0.826627 | 2.445632e-54 | -8.615850e-47 |
| Msa0768370 | Msa0989060 | 0.812513 | 4.082848e-51 | -8.615850e-47 |
| Msa0775300 | Msa0989060 | 0.817504 | 3.185958e-52 | -8.615850e-47 |
| Msa0777870 | Msa0989060 | 0.847240 | 1.310662e-59 | -8.615850e-47 |
| Msa0783160 | Msa0989060 | 0.874942 | 4.551648e-68 | -8.615850e-47 |
| Msa0784290 | Msa0989060 | 0.833562 | 4.965791e-56 | -8.615850e-47 |
| Msa0784300 | Msa0989060 | 0.825815 | 3.815126e-54 | -8.615850e-47 |
| Msa0787600 | Msa0989060 | 0.850065 | 2.159927e-60 | -8.615850e-47 |
| Msa0808010 | Msa0989060 | 0.861382 | 1.067140e-63 | -8.615850e-47 |
| Msa0808020 | Msa0989060 | 0.853980 | 1.669154e-61 | -8.615850e-47 |
| Msa0811080 | Msa0989060 | 0.846881 | 1.643984e-59 | -8.615850e-47 |
| Msa0811270 | Msa0989060 | 0.823492 | 1.345409e-53 | -8.615850e-47 |
| Msa0824600 | Msa0989060 | 0.841103 | 5.821531e-58 | -8.615850e-47 |
| Msa0825860 | Msa0989060 | 0.894499 | 2.327921e-75 | -8.615850e-47 |
| Msa0833290 | Msa0989060 | 0.839261 | 1.761647e-57 | -8.615850e-47 |
| Msa0833300 | Msa0989060 | 0.800719 | 1.263143e-48 | -8.615850e-47 |
| Msa0123810 | Msa0989060 | 0.868489 | 6.286791e-66 | -8.615850e-47 |
| Msa0124100 | Msa0989060 | 0.816721 | 4.778065e-52 | -8.615850e-47 |
| Msa0124150 | Msa0989060 | 0.811607 | 6.432067e-51 | -8.615850e-47 |
| Msa0142220 | Msa0989060 | 0.866450 | 2.826988e-65 | -8.615850e-47 |
| Msa0145750 | Msa0989060 | 0.897290 | 1.623457e-76 | -8.615850e-47 |
| Msa0153910 | Msa0989060 | 0.816824 | 4.530882e-52 | -8.615850e-47 |
| Msa0188460 | Msa0989060 | 0.822017 | 2.965837e-53 | -8.615850e-47 |
| Msa0192970 | Msa0989060 | 0.813497 | 2.484797e-51 | -8.615850e-47 |
| Msa0197010 | Msa0989060 | 0.812433 | 4.250780e-51 | -8.615850e-47 |
| Msa0200000 | Msa0989060 | 0.849248 | 3.653596e-60 | -8.615850e-47 |
| Msa0227480 | Msa0989060 | 0.880864 | 3.861861e-70 | -8.615850e-47 |
| Msa0231000 | Msa0989060 | 0.827346 | 1.645680e-54 | -8.615850e-47 |
| Msa0232850 | Msa0989060 | 0.899727 | 1.488165e-77 | -8.615850e-47 |
| Msa0235140 | Msa0989060 | 0.859994 | 2.812435e-63 | -8.615850e-47 |
| Msa0365500 | Msa0989060 | 0.823958 | 1.046246e-53 | -8.615850e-47 |
| Msa0366580 | Msa0989060 | 0.802955 | 4.388180e-49 | -8.615850e-47 |
| Msa0384800 | Msa0989060 | 0.888862 | 4.050478e-73 | -8.615850e-47 |
| Msa0384890 | Msa0989060 | 0.831668 | 1.464729e-55 | -8.615850e-47 |
| Msa0391180 | Msa0989060 | 0.806904 | 6.556730e-50 | -8.615850e-47 |
| Msa0394970 | Msa0989060 | 0.805971 | 1.031524e-49 | -8.615850e-47 |
| Msa0406120 | Msa0989060 | 0.848481 | 5.963007e-60 | -8.615850e-47 |
| Msa0406280 | Msa0989060 | 0.810192 | 1.302579e-50 | -8.615850e-47 |
| Msa0407750 | Msa0989060 | 0.814257 | 1.689497e-51 | -8.615850e-47 |
| Msa0414410 | Msa0989060 | 0.849034 | 4.189435e-60 | -8.615850e-47 |
| Msa0414420 | Msa0989060 | 0.888814 | 4.227926e-73 | -8.615850e-47 |
| Msa0429880 | Msa0989060 | 0.811505 | 6.770709e-51 | -8.615850e-47 |
| Msa0435230 | Msa0989060 | 0.824915 | 6.230027e-54 | -8.615850e-47 |
| Msa0436780 | Msa0989060 | 0.844354 | 7.962794e-59 | -8.615850e-47 |
| Msa0436800 | Msa0989060 | 0.828298 | 9.717113e-55 | -8.615850e-47 |
| Msa0438620 | Msa0989060 | 0.834006 | 3.846352e-56 | -8.615850e-47 |
| Msa0444130 | Msa0989060 | 0.832829 | 7.559550e-56 | -8.615850e-47 |
| Msa0450000 | Msa0989060 | 0.870468 | 1.426928e-66 | -8.615850e-47 |
| Msa0450570 | Msa0989060 | 0.826430 | 2.724604e-54 | -8.615850e-47 |
| Msa0451730 | Msa0989060 | 0.846227 | 2.478962e-59 | -8.615850e-47 |
| Msa0452900 | Msa0989060 | 0.893886 | 4.138659e-75 | -8.615850e-47 |
| Msa0452910 | Msa0989060 | 0.800221 | 1.595399e-48 | -8.615850e-47 |
| Msa0453120 | Msa0989060 | 0.871476 | 6.640253e-67 | -8.615850e-47 |
| Msa0454370 | Msa0989060 | 0.821395 | 4.130311e-53 | -8.615850e-47 |
| Msa0454910 | Msa0989060 | 0.851280 | 9.835425e-61 | -8.615850e-47 |
| Msa0459160 | Msa0989060 | 0.829428 | 5.177525e-55 | -8.615850e-47 |
| Msa0459170 | Msa0989060 | 0.820000 | 8.644154e-53 | -8.615850e-47 |
| Msa0479340 | Msa0989060 | 0.835225 | 1.899699e-56 | -8.615850e-47 |
| Msa0979850 | Msa0989060 | 0.804583 | 2.014744e-49 | -8.615850e-47 |
| Msa0981270 | Msa0989060 | 0.815219 | 1.034382e-51 | -8.615850e-47 |
| Msa0981370 | Msa0989060 | 0.840150 | 1.034220e-57 | -8.615850e-47 |
| Msa0986360 | Msa0989060 | 0.821750 | 3.420040e-53 | -8.615850e-47 |
| Msa0986400 | Msa0989060 | 0.804811 | 1.805859e-49 | -8.615850e-47 |
| Msa0989060 | Msa0998690 | 0.829477 | 5.035129e-55 | -8.615850e-47 |
| Msa0989060 | Msa1002310 | 0.811790 | 5.870546e-51 | -8.615850e-47 |
| Msa0989060 | Msa1016280 | 0.873659 | 1.239132e-67 | -8.615850e-47 |
| Msa0989060 | Msa1023010 | 0.810765 | 9.795082e-51 | -8.615850e-47 |
| Msa0989060 | Msa1023050 | 0.801325 | 9.498260e-49 | -8.615850e-47 |
| Msa0989060 | Msa1024230 | 0.801514 | 8.686369e-49 | -8.615850e-47 |
| Msa0989060 | Msa1024240 | 0.834163 | 3.512333e-56 | -8.615850e-47 |
| Msa0989060 | Msa1025360 | 0.895835 | 6.569861e-76 | -8.615850e-47 |
| Msa0989060 | Msa1025370 | 0.898961 | 3.173250e-77 | -8.615850e-47 |
| Msa0989060 | Msa1030060 | 0.818482 | 1.915277e-52 | -8.615850e-47 |
| Msa0989060 | Msa1044830 | 0.888592 | 5.147635e-73 | -8.615850e-47 |
| Msa0989060 | Msa1044840 | 0.897688 | 1.102865e-76 | -8.615850e-47 |
| Msa0989060 | Msa1057920 | 0.817581 | 3.062244e-52 | -8.615850e-47 |
| Msa0989060 | Msa1060840 | 0.833163 | 6.243788e-56 | -8.615850e-47 |
| Msa0989060 | Msa1092990 | 0.896771 | 2.679148e-76 | -8.615850e-47 |
| Msa0989060 | Msa1099970 | 0.826044 | 3.365701e-54 | -8.615850e-47 |
| Msa0989060 | Msa1100980 | 0.897594 | 1.207986e-76 | -8.615850e-47 |
| Msa0989060 | Msa1109440 | 0.854408 | 1.255882e-61 | -8.615850e-47 |
| Msa0989060 | Msa1111150 | 0.800058 | 1.722272e-48 | -8.615850e-47 |
| Msa0989060 | Msa1114030 | 0.808533 | 2.955648e-50 | -8.615850e-47 |
| Msa0989060 | Msa1121200 | 0.846218 | 2.492803e-59 | -8.615850e-47 |
| Msa0989060 | Msa1121480 | 0.800511 | 1.392958e-48 | -8.615850e-47 |
| Msa0989060 | Msa1135740 | 0.877851 | 4.509584e-69 | -8.615850e-47 |
| Msa0989060 | Msa1136090 | 0.856898 | 2.356034e-62 | -8.615850e-47 |
| Msa0989060 | Msa1137690 | 0.820110 | 8.156281e-53 | -8.615850e-47 |
| Msa0989060 | Msa1146110 | 0.873566 | 1.331344e-67 | -8.615850e-47 |
| Msa0989060 | Msa1149360 | 0.805782 | 1.130667e-49 | -8.615850e-47 |
| Msa0989060 | Msa1150370 | 0.858957 | 5.765824e-63 | -8.615850e-47 |
| Msa0989060 | Msa1160670 | 0.815588 | 8.559841e-52 | -8.615850e-47 |
| Msa0989060 | Msa1173920 | 0.845208 | 4.687336e-59 | -8.615850e-47 |
| Msa0989060 | Msa1178340 | 0.807114 | 5.920695e-50 | -8.615850e-47 |
| Msa0989060 | Msa1182090 | 0.841437 | 4.755762e-58 | -8.615850e-47 |
| Msa0989060 | Msa1187940 | 0.860816 | 1.586325e-63 | -8.615850e-47 |
| Msa0989060 | Msa1187950 | 0.878399 | 2.899020e-69 | -8.615850e-47 |
| Msa0989060 | Msa1192640 | 0.880764 | 4.193660e-70 | -8.615850e-47 |
| Msa0989060 | Msa1211030 | 0.818945 | 1.503677e-52 | -8.615850e-47 |
| Msa0989060 | Msa1230430 | 0.825653 | 4.169736e-54 | -8.615850e-47 |
| Msa0989060 | Msa1246880 | 0.870714 | 1.184415e-66 | -8.615850e-47 |
| Msa0989060 | Msa1248300 | 0.805764 | 1.140071e-49 | -8.615850e-47 |
| Msa0989060 | Msa1248310 | 0.816981 | 4.178567e-52 | -8.615850e-47 |
| Msa0989060 | Msa1269670 | 0.879434 | 1.249790e-69 | -8.615850e-47 |
| Msa0989060 | Msa1270230 | 0.880800 | 4.073075e-70 | -8.615850e-47 |
| Msa0989060 | Msa1270240 | 0.879884 | 8.651983e-70 | -8.615850e-47 |
| Msa0989060 | Msa1270270 | 0.885988 | 5.053645e-72 | -8.615850e-47 |
| Msa0989060 | Msa1273230 | 0.864944 | 8.444370e-65 | -8.615850e-47 |
| Msa0989060 | Msa1281860 | 0.803092 | 4.110145e-49 | -8.615850e-47 |
| Msa0989060 | Msa1283330 | 0.906018 | 2.322328e-80 | -8.615850e-47 |
| Msa0989060 | Msa1285930 | 0.904308 | 1.405233e-79 | -8.615850e-47 |
| Msa0989060 | Msa1287800 | 0.915054 | 9.276776e-85 | -8.615850e-47 |
| Msa0989060 | Msa1287810 | 0.912358 | 2.134750e-83 | -8.615850e-47 |
| Msa0989060 | Msa1287820 | 0.872067 | 4.226663e-67 | -8.615850e-47 |
| Msa0989060 | Msa1287830 | 0.842135 | 3.110186e-58 | -8.615850e-47 |
| Msa0989060 | Msa1289420 | 0.823476 | 1.356789e-53 | -8.615850e-47 |
| Msa0989060 | Msa1289430 | 0.861480 | 9.962802e-64 | -8.615850e-47 |
| Msa0989060 | Msa1297210 | 0.832247 | 1.053808e-55 | -8.615850e-47 |
| Msa0989060 | Msa1305480 | 0.822042 | 2.926530e-53 | -8.615850e-47 |
| Msa0989060 | Msa1307890 | 0.848723 | 5.111907e-60 | -8.615850e-47 |
| Msa0989060 | Msa1310120 | 0.854455 | 1.217077e-61 | -8.615850e-47 |
| Msa0989060 | Msa1314280 | 0.821457 | 3.997544e-53 | -8.615850e-47 |
| Msa0989060 | Msa1320300 | 0.835391 | 1.724438e-56 | -8.615850e-47 |
| Msa0989060 | Msa1340590 | 0.860821 | 1.581026e-63 | -8.615850e-47 |
| Msa0989060 | Msa1342200 | 0.815265 | 1.009911e-51 | -8.615850e-47 |
| Msa0989060 | Msa1344520 | 0.859385 | 4.290037e-63 | -8.615850e-47 |
| Msa0989060 | Msa1369430 | 0.862220 | 5.913519e-64 | -8.615850e-47 |
| Msa0989060 | Msa1382690 | 0.818937 | 1.510279e-52 | -8.615850e-47 |
| Msa0989060 | Msa1382700 | 0.803619 | 3.196680e-49 | -8.615850e-47 |
| Msa0989060 | Msa1386330 | 0.854151 | 1.489406e-61 | -8.615850e-47 |
| Msa0989060 | Msa1397150 | 0.812403 | 4.315609e-51 | -8.615850e-47 |
| Msa0989060 | Msa1397580 | 0.861243 | 1.176359e-63 | -8.615850e-47 |
| Msa0989060 | Msa1402790 | 0.880027 | 7.694595e-70 | -8.615850e-47 |
| Msa0989060 | Msa1404000 | 0.897264 | 1.664851e-76 | -8.615850e-47 |
| Msa0989060 | Msa1408780 | 0.858994 | 5.621075e-63 | -8.615850e-47 |
| Msa0989060 | Msa1415310 | 0.880744 | 4.265806e-70 | -8.615850e-47 |
| Msa0989060 | Msa1422180 | 0.898733 | 3.971299e-77 | -8.615850e-47 |
| Msa0989060 | Msa1433120 | 0.862978 | 3.455692e-64 | -8.615850e-47 |
| Msa0989060 | Msa1451190 | 0.822857 | 1.892483e-53 | -8.615850e-47 |
| Msa0989060 | Msa1451570 | 0.809630 | 1.721047e-50 | -8.615850e-47 |
| Msa0251320 | Msa0989060 | 0.824542 | 7.629956e-54 | -8.615850e-47 |
| Msa0256440 | Msa0989060 | 0.809624 | 1.725675e-50 | -8.615850e-47 |
| Msa0267000 | Msa0989060 | 0.885256 | 9.514528e-72 | -8.615850e-47 |
| Msa0267010 | Msa0989060 | 0.893663 | 5.098106e-75 | -8.615850e-47 |
| Msa0270520 | Msa0989060 | 0.875781 | 2.351100e-68 | -8.615850e-47 |
| Msa0282310 | Msa0989060 | 0.802159 | 6.402357e-49 | -8.615850e-47 |
| Msa0304170 | Msa0989060 | 0.827852 | 1.244052e-54 | -8.615850e-47 |
| Msa0306460 | Msa0989060 | 0.863533 | 2.326218e-64 | -8.615850e-47 |
| Msa0309020 | Msa0989060 | 0.827834 | 1.256607e-54 | -8.615850e-47 |
| Msa0311750 | Msa0989060 | 0.820418 | 6.930531e-53 | -8.615850e-47 |
| Msa0313760 | Msa0989060 | 0.828364 | 9.369265e-55 | -8.615850e-47 |
| Msa0337900 | Msa0989060 | 0.808791 | 2.603905e-50 | -8.615850e-47 |
| Msa0342240 | Msa0989060 | 0.883797 | 3.310110e-71 | -8.615850e-47 |
| Msa0360510 | Msa0989060 | 0.891413 | 4.063590e-74 | -8.615850e-47 |
| Msa0363300 | Msa0989060 | 0.826258 | 2.994924e-54 | -8.615850e-47 |
| Msa0485030 | Msa0989060 | 0.815977 | 7.011774e-52 | -8.615850e-47 |
| Msa0485370 | Msa0989060 | 0.805514 | 1.286629e-49 | -8.615850e-47 |
| Msa0491590 | Msa0989060 | 0.854060 | 1.583045e-61 | -8.615850e-47 |
| Msa0502270 | Msa0989060 | 0.814096 | 1.832991e-51 | -8.615850e-47 |
| Msa0502760 | Msa0989060 | 0.854332 | 1.321031e-61 | -8.615850e-47 |
| Msa0506270 | Msa0989060 | 0.868808 | 4.958961e-66 | -8.615850e-47 |
| Msa0534540 | Msa0989060 | 0.803593 | 3.237705e-49 | -8.615850e-47 |
| Msa0548060 | Msa0989060 | 0.837404 | 5.303894e-57 | -8.615850e-47 |
| Msa0564890 | Msa0989060 | 0.863577 | 2.253865e-64 | -8.615850e-47 |
| Msa0596150 | Msa0989060 | 0.841689 | 4.080237e-58 | -8.615850e-47 |
| Msa0597660 | Msa0989060 | 0.808023 | 3.795816e-50 | -8.615850e-47 |
| Msa0598780 | Msa0989060 | 0.827284 | 1.703638e-54 | -8.615850e-47 |
| Msa0845930 | Msa0989060 | 0.813359 | 2.663537e-51 | -8.615850e-47 |
| Msa0846210 | Msa0989060 | 0.857342 | 1.742403e-62 | -8.615850e-47 |
| Msa0846330 | Msa0989060 | 0.865895 | 4.237605e-65 | -8.615850e-47 |
| Msa0846350 | Msa0989060 | 0.877063 | 8.481422e-69 | -8.615850e-47 |
| Msa0848960 | Msa0989060 | 0.823683 | 1.213655e-53 | -8.615850e-47 |
| Msa0854980 | Msa0989060 | 0.841505 | 4.562099e-58 | -8.615850e-47 |
| Msa0858980 | Msa0989060 | 0.856856 | 2.423832e-62 | -8.615850e-47 |
| Msa0864070 | Msa0989060 | 0.804982 | 1.662848e-49 | -8.615850e-47 |
| Msa0865320 | Msa0989060 | 0.873441 | 1.466562e-67 | -8.615850e-47 |
| Msa0872230 | Msa0989060 | 0.812845 | 3.453694e-51 | -8.615850e-47 |
| Msa0873460 | Msa0989060 | 0.829964 | 3.833852e-55 | -8.615850e-47 |
| Msa0877250 | Msa0989060 | 0.803173 | 3.954585e-49 | -8.615850e-47 |
| Msa0884150 | Msa0989060 | 0.800397 | 1.469064e-48 | -8.615850e-47 |
| Msa0885280 | Msa0989060 | 0.827613 | 1.420089e-54 | -8.615850e-47 |
| Msa0885290 | Msa0989060 | 0.863581 | 2.248097e-64 | -8.615850e-47 |
| Msa0887920 | Msa0989060 | 0.861538 | 9.560108e-64 | -8.615850e-47 |
| Msa0888370 | Msa0989060 | 0.868929 | 4.529800e-66 | -8.615850e-47 |
| Msa0888420 | Msa0989060 | 0.817864 | 2.643845e-52 | -8.615850e-47 |
| Msa0889850 | Msa0989060 | 0.803245 | 3.822432e-49 | -8.615850e-47 |
| Msa0896080 | Msa0989060 | 0.825009 | 5.921020e-54 | -8.615850e-47 |
| Msa0898080 | Msa0989060 | 0.820072 | 8.318463e-53 | -8.615850e-47 |
| Msa0898380 | Msa0989060 | 0.805429 | 1.340891e-49 | -8.615850e-47 |
| Msa0899430 | Msa0989060 | 0.821017 | 5.049086e-53 | -8.615850e-47 |
| Msa0899450 | Msa0989060 | 0.824062 | 9.892004e-54 | -8.615850e-47 |
| Msa0907260 | Msa0989060 | 0.862069 | 6.577197e-64 | -8.615850e-47 |
| Msa0914760 | Msa0989060 | 0.804200 | 2.421230e-49 | -8.615850e-47 |
| Msa0952190 | Msa0989060 | 0.805215 | 1.486502e-49 | -8.615850e-47 |
| Msa0952350 | Msa0989060 | 0.802184 | 6.327114e-49 | -8.615850e-47 |
| Msa0954020 | Msa0989060 | 0.821818 | 3.297715e-53 | -8.615850e-47 |
| Msa0954910 | Msa0989060 | 0.831734 | 1.410874e-55 | -8.615850e-47 |
| Msa0956270 | Msa0989060 | 0.853809 | 1.869664e-61 | -8.615850e-47 |
| Msa0957860 | Msa0989060 | 0.857713 | 1.352677e-62 | -8.615850e-47 |
| Msa0957960 | Msa0989060 | 0.858061 | 1.066829e-62 | -8.615850e-47 |
| Msa0958550 | Msa0989060 | 0.824231 | 9.026324e-54 | -8.615850e-47 |
| Msa0974870 | Msa0989060 | 0.803905 | 2.788671e-49 | -8.615850e-47 |
| Msa0979410 | Msa0989060 | 0.840039 | 1.105286e-57 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 17 sgRNAs with CRISPR-Local
Find 114 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCTCGTGGATTTGTGTAGTA+TGG | 0.256278 | 6_4:+44288806 | Msa0989060:CDS |
| GAGCTACCTGAGAGAGTTAC+AGG | 0.324996 | 6_4:+44289842 | Msa0989060:CDS |
| TATAAATCAAAGTACCTATA+TGG | 0.351425 | 6_4:-44289894 | None:intergenic |
| GTAGTATGGATTGGCTTGTT+TGG | 0.381072 | 6_4:+44288820 | Msa0989060:CDS |
| GTGTTAAAGACCAAGGGTTA+TGG | 0.386926 | 6_4:+44288871 | Msa0989060:CDS |
| CTATAATTACTTCACCATAT+AGG | 0.420064 | 6_4:+44289880 | Msa0989060:CDS |
| ATTGGCTTGTTTGGAGATGT+TGG | 0.461764 | 6_4:+44288829 | Msa0989060:CDS |
| TCGTAACCTGTAACTCTCTC+AGG | 0.465100 | 6_4:-44289848 | None:intergenic |
| TGGAGATGTTGGCTTTGTCT+AGG | 0.492035 | 6_4:+44288840 | Msa0989060:CDS |
| TGGATTTGTGTAGTATGGAT+TGG | 0.527197 | 6_4:+44288811 | Msa0989060:CDS |
| ACACAGGGCAGATAAGTTAG+TGG | 0.574770 | 6_4:+44289818 | Msa0989060:intron |
| GACTCTTGTGTTAAAGACCA+AGG | 0.579268 | 6_4:+44288864 | Msa0989060:CDS |
| TATAAACATACCATAACCCT+TGG | 0.580976 | 6_4:-44288881 | None:intergenic |
| ACTCTTGTGTTAAAGACCAA+GGG | 0.605087 | 6_4:+44288865 | Msa0989060:CDS |
| CTAACATATGCGAATCCTCG+TGG | 0.630806 | 6_4:+44288791 | None:intergenic |
| GAGAGAGTTACAGGTTACGA+AGG | 0.700662 | 6_4:+44289851 | Msa0989060:CDS |
| CCATACTACACAAATCCACG+AGG | 0.750810 | 6_4:-44288806 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTGTTAATGTAAAAAATATA+GGG | - | chr6_4:44289319-44289338 | None:intergenic | 10.0% |
| !! | ATTGTTAATGTAAAAAATAT+AGG | - | chr6_4:44289320-44289339 | None:intergenic | 10.0% |
| !! | TTGTTAATGTAAAAAATATA+GGG | - | chr6_4:44289319-44289338 | None:intergenic | 10.0% |
| !! | ATTGTTAATGTAAAAAATAT+AGG | - | chr6_4:44289320-44289339 | None:intergenic | 10.0% |
| !! | TAGTTTAATTAAGAAAAGTA+AGG | + | chr6_4:44289070-44289089 | Msa0989060:intron | 15.0% |
| !! | TAGTTTAATTAAGAAAAGTA+AGG | + | chr6_4:44289070-44289089 | Msa0989060:intron | 15.0% |
| !!! | CTTTTCTTAATTAAACTAAC+AGG | - | chr6_4:44289068-44289087 | None:intergenic | 20.0% |
| !! | ATGTCTTAAAATAACTTTGT+AGG | - | chr6_4:44289423-44289442 | None:intergenic | 20.0% |
| !!! | TATAAATCAAAGTACCTATA+TGG | - | chr6_4:44289897-44289916 | None:intergenic | 20.0% |
| !!! | TACTTTGATTTATACAAGTT+GGG | + | chr6_4:44289903-44289922 | Msa0989060:intron | 20.0% |
| !!! | CTTTTCTTAATTAAACTAAC+AGG | - | chr6_4:44289068-44289087 | None:intergenic | 20.0% |
| !! | ATGTCTTAAAATAACTTTGT+AGG | - | chr6_4:44289423-44289442 | None:intergenic | 20.0% |
| !!! | TATAAATCAAAGTACCTATA+TGG | - | chr6_4:44289897-44289916 | None:intergenic | 20.0% |
| !!! | TACTTTGATTTATACAAGTT+GGG | + | chr6_4:44289903-44289922 | Msa0989060:intron | 20.0% |
| ! | GTAAAATATTGTGTAGAGTA+TGG | + | chr6_4:44288918-44288937 | Msa0989060:intron | 25.0% |
| ! | CTTGTTAGTATGTTATAGTA+TGG | + | chr6_4:44288972-44288991 | Msa0989060:intron | 25.0% |
| ! | CTATAATTACTTCACCATAT+AGG | + | chr6_4:44289880-44289899 | Msa0989060:CDS | 25.0% |
| !! | GTACTTTGATTTATACAAGT+TGG | + | chr6_4:44289902-44289921 | Msa0989060:intron | 25.0% |
| !! | ACTTTGATTTATACAAGTTG+GGG | + | chr6_4:44289904-44289923 | Msa0989060:intron | 25.0% |
| ! | GTAAAATATTGTGTAGAGTA+TGG | + | chr6_4:44288918-44288937 | Msa0989060:intron | 25.0% |
| ! | CTTGTTAGTATGTTATAGTA+TGG | + | chr6_4:44288972-44288991 | Msa0989060:intron | 25.0% |
| ! | CTATAATTACTTCACCATAT+AGG | + | chr6_4:44289880-44289899 | Msa0989060:CDS | 25.0% |
| !! | GTACTTTGATTTATACAAGT+TGG | + | chr6_4:44289902-44289921 | Msa0989060:intron | 25.0% |
| !! | ACTTTGATTTATACAAGTTG+GGG | + | chr6_4:44289904-44289923 | Msa0989060:intron | 25.0% |
| TATAAACATACCATAACCCT+TGG | - | chr6_4:44288884-44288903 | None:intergenic | 30.0% | |
| AAGGGTTATGGTATGTTTAT+AGG | + | chr6_4:44288883-44288902 | Msa0989060:intron | 30.0% | |
| ATATTGTGTAGAGTATGGTA+TGG | + | chr6_4:44288923-44288942 | Msa0989060:intron | 30.0% | |
| !! | CAGCTACTTGTATTTTAGAA+AGG | - | chr6_4:44289151-44289170 | None:intergenic | 30.0% |
| AGCTATAAACACAACTATGT+TGG | + | chr6_4:44289394-44289413 | Msa0989060:intron | 30.0% | |
| TATACTGAAGAAAGACAATG+AGG | - | chr6_4:44289504-44289523 | None:intergenic | 30.0% | |
| !! | TTTTAGGAAGTTATGTGTAC+TGG | - | chr6_4:44289648-44289667 | None:intergenic | 30.0% |
| AGCTTACATCACAAAAAAGA+AGG | - | chr6_4:44289766-44289785 | None:intergenic | 30.0% | |
| ATAGGTACACAAAGAAAAAG+AGG | - | chr6_4:44289963-44289982 | None:intergenic | 30.0% | |
| ! | ACAAATGTGAGAAGTTTTCT+TGG | + | chr6_4:44289992-44290011 | Msa0989060:CDS | 30.0% |
| TATAAACATACCATAACCCT+TGG | - | chr6_4:44288884-44288903 | None:intergenic | 30.0% | |
| AAGGGTTATGGTATGTTTAT+AGG | + | chr6_4:44288883-44288902 | Msa0989060:intron | 30.0% | |
| ATATTGTGTAGAGTATGGTA+TGG | + | chr6_4:44288923-44288942 | Msa0989060:intron | 30.0% | |
| !! | CAGCTACTTGTATTTTAGAA+AGG | - | chr6_4:44289151-44289170 | None:intergenic | 30.0% |
| AGCTATAAACACAACTATGT+TGG | + | chr6_4:44289394-44289413 | Msa0989060:intron | 30.0% | |
| TATACTGAAGAAAGACAATG+AGG | - | chr6_4:44289504-44289523 | None:intergenic | 30.0% | |
| !! | TTTTAGGAAGTTATGTGTAC+TGG | - | chr6_4:44289648-44289667 | None:intergenic | 30.0% |
| AGCTTACATCACAAAAAAGA+AGG | - | chr6_4:44289766-44289785 | None:intergenic | 30.0% | |
| ATAGGTACACAAAGAAAAAG+AGG | - | chr6_4:44289963-44289982 | None:intergenic | 30.0% | |
| ! | ACAAATGTGAGAAGTTTTCT+TGG | + | chr6_4:44289992-44290011 | Msa0989060:CDS | 30.0% |
| TGGATTTGTGTAGTATGGAT+TGG | + | chr6_4:44288811-44288830 | Msa0989060:CDS | 35.0% | |
| ACTCTTGTGTTAAAGACCAA+GGG | + | chr6_4:44288865-44288884 | Msa0989060:CDS | 35.0% | |
| !! | TGTTTATAGGAGCACTAACA+AGG | + | chr6_4:44288896-44288915 | Msa0989060:intron | 35.0% |
| TAGCTGAAGTATGATTCACA+AGG | + | chr6_4:44289165-44289184 | Msa0989060:intron | 35.0% | |
| AGCTGAAGTATGATTCACAA+GGG | + | chr6_4:44289166-44289185 | Msa0989060:intron | 35.0% | |
| TCAGATATGCTAGTAAGCTA+TGG | + | chr6_4:44289240-44289259 | Msa0989060:intron | 35.0% | |
| ATCTAACACGACATTAACAC+GGG | - | chr6_4:44289352-44289371 | None:intergenic | 35.0% | |
| CATCTAACACGACATTAACA+CGG | - | chr6_4:44289353-44289372 | None:intergenic | 35.0% | |
| TGAACTGAAACTGAAACTTC+AGG | - | chr6_4:44289451-44289470 | None:intergenic | 35.0% | |
| ! | ACTATGCAACACATTGACTA+TGG | + | chr6_4:44289569-44289588 | Msa0989060:intron | 35.0% |
| ! | CAAACTGAACACTGCATTTT+AGG | - | chr6_4:44289664-44289683 | None:intergenic | 35.0% |
| CTAAAATGCAGTGTTCAGTT+TGG | + | chr6_4:44289662-44289681 | Msa0989060:intron | 35.0% | |
| ! | TTTTTGTGTCTGTTGTACAC+AGG | + | chr6_4:44289802-44289821 | Msa0989060:intron | 35.0% |
| ! | TTTTGTGTCTGTTGTACACA+GGG | + | chr6_4:44289803-44289822 | Msa0989060:intron | 35.0% |
| CACATTTGTCTCTACATGAT+AGG | - | chr6_4:44289981-44290000 | None:intergenic | 35.0% | |
| ! | TGAGAAGTTTTCTTGGCTTA+AGG | + | chr6_4:44289999-44290018 | Msa0989060:CDS | 35.0% |
| TGGATTTGTGTAGTATGGAT+TGG | + | chr6_4:44288811-44288830 | Msa0989060:CDS | 35.0% | |
| ACTCTTGTGTTAAAGACCAA+GGG | + | chr6_4:44288865-44288884 | Msa0989060:CDS | 35.0% | |
| !! | TGTTTATAGGAGCACTAACA+AGG | + | chr6_4:44288896-44288915 | Msa0989060:intron | 35.0% |
| TAGCTGAAGTATGATTCACA+AGG | + | chr6_4:44289165-44289184 | Msa0989060:intron | 35.0% | |
| AGCTGAAGTATGATTCACAA+GGG | + | chr6_4:44289166-44289185 | Msa0989060:intron | 35.0% | |
| TCAGATATGCTAGTAAGCTA+TGG | + | chr6_4:44289240-44289259 | Msa0989060:intron | 35.0% | |
| ATCTAACACGACATTAACAC+GGG | - | chr6_4:44289352-44289371 | None:intergenic | 35.0% | |
| CATCTAACACGACATTAACA+CGG | - | chr6_4:44289353-44289372 | None:intergenic | 35.0% | |
| TGAACTGAAACTGAAACTTC+AGG | - | chr6_4:44289451-44289470 | None:intergenic | 35.0% | |
| ! | ACTATGCAACACATTGACTA+TGG | + | chr6_4:44289569-44289588 | Msa0989060:intron | 35.0% |
| ! | CAAACTGAACACTGCATTTT+AGG | - | chr6_4:44289664-44289683 | None:intergenic | 35.0% |
| CTAAAATGCAGTGTTCAGTT+TGG | + | chr6_4:44289662-44289681 | Msa0989060:intron | 35.0% | |
| ! | TTTTTGTGTCTGTTGTACAC+AGG | + | chr6_4:44289802-44289821 | Msa0989060:intron | 35.0% |
| ! | TTTTGTGTCTGTTGTACACA+GGG | + | chr6_4:44289803-44289822 | Msa0989060:intron | 35.0% |
| CACATTTGTCTCTACATGAT+AGG | - | chr6_4:44289981-44290000 | None:intergenic | 35.0% | |
| ! | TGAGAAGTTTTCTTGGCTTA+AGG | + | chr6_4:44289999-44290018 | Msa0989060:CDS | 35.0% |
| !! | GTAGTATGGATTGGCTTGTT+TGG | + | chr6_4:44288820-44288839 | Msa0989060:CDS | 40.0% |
| !! | ATTGGCTTGTTTGGAGATGT+TGG | + | chr6_4:44288829-44288848 | Msa0989060:CDS | 40.0% |
| GACTCTTGTGTTAAAGACCA+AGG | + | chr6_4:44288864-44288883 | Msa0989060:CDS | 40.0% | |
| GTGTTAAAGACCAAGGGTTA+TGG | + | chr6_4:44288871-44288890 | Msa0989060:CDS | 40.0% | |
| GTTAGATGTCCGTGCTTTAT+AGG | + | chr6_4:44289365-44289384 | Msa0989060:intron | 40.0% | |
| AGTCATGAACTGATCCATTG+TGG | + | chr6_4:44289471-44289490 | Msa0989060:intron | 40.0% | |
| GTCATGAACTGATCCATTGT+GGG | + | chr6_4:44289472-44289491 | Msa0989060:intron | 40.0% | |
| AATGAGGAGTTATCCCACAA+TGG | - | chr6_4:44289488-44289507 | None:intergenic | 40.0% | |
| !! | GTAGTATGGATTGGCTTGTT+TGG | + | chr6_4:44288820-44288839 | Msa0989060:CDS | 40.0% |
| !! | ATTGGCTTGTTTGGAGATGT+TGG | + | chr6_4:44288829-44288848 | Msa0989060:CDS | 40.0% |
| GACTCTTGTGTTAAAGACCA+AGG | + | chr6_4:44288864-44288883 | Msa0989060:CDS | 40.0% | |
| GTGTTAAAGACCAAGGGTTA+TGG | + | chr6_4:44288871-44288890 | Msa0989060:CDS | 40.0% | |
| GTTAGATGTCCGTGCTTTAT+AGG | + | chr6_4:44289365-44289384 | Msa0989060:intron | 40.0% | |
| AGTCATGAACTGATCCATTG+TGG | + | chr6_4:44289471-44289490 | Msa0989060:intron | 40.0% | |
| GTCATGAACTGATCCATTGT+GGG | + | chr6_4:44289472-44289491 | Msa0989060:intron | 40.0% | |
| AATGAGGAGTTATCCCACAA+TGG | - | chr6_4:44289488-44289507 | None:intergenic | 40.0% | |
| CCATACTACACAAATCCACG+AGG | - | chr6_4:44288809-44288828 | None:intergenic | 45.0% | |
| CCTCGTGGATTTGTGTAGTA+TGG | + | chr6_4:44288806-44288825 | Msa0989060:CDS | 45.0% | |
| !! | TGGAGATGTTGGCTTTGTCT+AGG | + | chr6_4:44288840-44288859 | Msa0989060:CDS | 45.0% |
| AGATGTCCGTGCTTTATAGG+TGG | + | chr6_4:44289368-44289387 | Msa0989060:intron | 45.0% | |
| GATGTCCGTGCTTTATAGGT+GGG | + | chr6_4:44289369-44289388 | Msa0989060:intron | 45.0% | |
| ! | TGCAGTGTTCAGTTTGGAAC+AGG | + | chr6_4:44289668-44289687 | Msa0989060:intron | 45.0% |
| ACACAGGGCAGATAAGTTAG+TGG | + | chr6_4:44289818-44289837 | Msa0989060:intron | 45.0% | |
| TCGTAACCTGTAACTCTCTC+AGG | - | chr6_4:44289851-44289870 | None:intergenic | 45.0% | |
| GAGAGAGTTACAGGTTACGA+AGG | + | chr6_4:44289851-44289870 | Msa0989060:CDS | 45.0% | |
| CCATACTACACAAATCCACG+AGG | - | chr6_4:44288809-44288828 | None:intergenic | 45.0% | |
| CCTCGTGGATTTGTGTAGTA+TGG | + | chr6_4:44288806-44288825 | Msa0989060:CDS | 45.0% | |
| !! | TGGAGATGTTGGCTTTGTCT+AGG | + | chr6_4:44288840-44288859 | Msa0989060:CDS | 45.0% |
| AGATGTCCGTGCTTTATAGG+TGG | + | chr6_4:44289368-44289387 | Msa0989060:intron | 45.0% | |
| GATGTCCGTGCTTTATAGGT+GGG | + | chr6_4:44289369-44289388 | Msa0989060:intron | 45.0% | |
| ! | TGCAGTGTTCAGTTTGGAAC+AGG | + | chr6_4:44289668-44289687 | Msa0989060:intron | 45.0% |
| ACACAGGGCAGATAAGTTAG+TGG | + | chr6_4:44289818-44289837 | Msa0989060:intron | 45.0% | |
| TCGTAACCTGTAACTCTCTC+AGG | - | chr6_4:44289851-44289870 | None:intergenic | 45.0% | |
| GAGAGAGTTACAGGTTACGA+AGG | + | chr6_4:44289851-44289870 | Msa0989060:CDS | 45.0% | |
| GCTAGCCCACCTATAAAGCA+CGG | - | chr6_4:44289377-44289396 | None:intergenic | 50.0% | |
| GAGCTACCTGAGAGAGTTAC+AGG | + | chr6_4:44289842-44289861 | Msa0989060:CDS | 50.0% | |
| GCTAGCCCACCTATAAAGCA+CGG | - | chr6_4:44289377-44289396 | None:intergenic | 50.0% | |
| GAGCTACCTGAGAGAGTTAC+AGG | + | chr6_4:44289842-44289861 | Msa0989060:CDS | 50.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6_4 | gene | 44288798 | 44290026 | 44288798 | ID=Msa0989060;Name=Msa0989060 |
| chr6_4 | mRNA | 44288798 | 44290026 | 44288798 | ID=Msa0989060-mRNA-1;Parent=Msa0989060;Name=Msa0989060-mRNA-1;_AED=0.51;_eAED=0.70;_QI=0|0|0|1|0.5|0.66|3|0|69 |
| chr6_4 | exon | 44288798 | 44288892 | 44288798 | ID=Msa0989060-mRNA-1:exon:10176;Parent=Msa0989060-mRNA-1 |
| chr6_4 | exon | 44289824 | 44289901 | 44289824 | ID=Msa0989060-mRNA-1:exon:10177;Parent=Msa0989060-mRNA-1 |
| chr6_4 | exon | 44289990 | 44290026 | 44289990 | ID=Msa0989060-mRNA-1:exon:10178;Parent=Msa0989060-mRNA-1 |
| chr6_4 | CDS | 44288798 | 44288892 | 44288798 | ID=Msa0989060-mRNA-1:cds;Parent=Msa0989060-mRNA-1 |
| chr6_4 | CDS | 44289824 | 44289901 | 44289824 | ID=Msa0989060-mRNA-1:cds;Parent=Msa0989060-mRNA-1 |
| chr6_4 | CDS | 44289990 | 44290026 | 44289990 | ID=Msa0989060-mRNA-1:cds;Parent=Msa0989060-mRNA-1 |
| Gene Sequence |
| Protein sequence |
