Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1013430 | KAG5240291.1 | 57.407 | 54 | 23 | 0 | 147 | 200 | 27 | 80 | 3.03e-11 | 68.6 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1013430 | A0A836DW95 | 57.407 | 54 | 23 | 0 | 147 | 200 | 27 | 80 | 1.45e-11 | 68.6 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0086160 | Msa1013430 | 0.808501 | 3.002914e-50 | -8.615850e-47 |
| Msa0663400 | Msa1013430 | 0.853219 | 2.761220e-61 | -8.615850e-47 |
| Msa0796290 | Msa1013430 | 0.819706 | 1.008726e-52 | -8.615850e-47 |
| Msa0826610 | Msa1013430 | 0.817390 | 3.380550e-52 | -8.615850e-47 |
| Msa0373350 | Msa1013430 | 0.805759 | 1.143096e-49 | -8.615850e-47 |
| Msa0433060 | Msa1013430 | 0.804605 | 1.993385e-49 | -8.615850e-47 |
| Msa0468440 | Msa1013430 | 0.815676 | 8.182876e-52 | -8.615850e-47 |
| Msa1013430 | Msa1079910 | 0.806512 | 7.934880e-50 | -8.615850e-47 |
| Msa1013430 | Msa1093500 | 0.942055 | 1.413147e-101 | -8.615850e-47 |
| Msa1013430 | Msa1130680 | 0.806207 | 9.199908e-50 | -8.615850e-47 |
| Msa1013430 | Msa1165210 | 0.841424 | 4.791397e-58 | -8.615850e-47 |
| Msa1013430 | Msa1462580 | 0.845972 | 2.908203e-59 | -8.615850e-47 |
| Msa0277600 | Msa1013430 | 0.801775 | 7.678129e-49 | -8.615850e-47 |
| Msa0524680 | Msa1013430 | 0.804605 | 1.993385e-49 | -8.615850e-47 |
| Msa0568380 | Msa1013430 | 0.847601 | 1.043266e-59 | -8.615850e-47 |
| Msa0585570 | Msa1013430 | 0.853583 | 2.170967e-61 | -8.615850e-47 |
| Msa0601130 | Msa1013430 | 0.841874 | 3.646579e-58 | -8.615850e-47 |
| Msa0864660 | Msa1013430 | 0.820422 | 6.918744e-53 | -8.615850e-47 |
| Msa0902730 | Msa1013430 | 0.939142 | 2.088493e-99 | -8.615850e-47 |
| Msa0930890 | Msa1013430 | 0.802360 | 5.822323e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 48 sgRNAs with CRISPR-Local
Find 330 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGTTCTGCGGTTTCAAAATT+TGG | 0.155133 | 7_1:-19982932 | None:intergenic |
| GCCACTGCATCTTCAGAATT+AGG | 0.220908 | 7_1:+19984029 | Msa1013430:CDS |
| GAAGTGTGGCGGTGCCTCTT+TGG | 0.285127 | 7_1:-19984138 | None:intergenic |
| GTTCTGCGGTTTCAAAATTT+GGG | 0.353472 | 7_1:-19982931 | None:intergenic |
| CTCTTAATCTGCTGTTAAGT+TGG | 0.363168 | 7_1:-19982525 | None:intergenic |
| ATCATAAACAGCAGAATTGA+TGG | 0.369582 | 7_1:-19984557 | None:intergenic |
| TCAACCCTTGCCGCCGGCGA+AGG | 0.373521 | 7_1:-19983015 | None:intergenic |
| TCTGAAGATGCAGTGGCTCT+AGG | 0.431928 | 7_1:-19984023 | None:intergenic |
| TTACTTTGATATACGCGATC+TGG | 0.437927 | 7_1:-19982878 | None:intergenic |
| CCCTTGCCGCCGGCGAAGGG+TGG | 0.442804 | 7_1:-19983011 | None:intergenic |
| GACGGGATGGAGGGGCGGCG+AGG | 0.448992 | 7_1:+19983057 | Msa1013430:CDS |
| ATGTTTGCAAGCACGGAACT+TGG | 0.457129 | 7_1:+19982579 | Msa1013430:CDS |
| ACCGCCACACTTCCACCAAA+GGG | 0.460737 | 7_1:+19984148 | Msa1013430:CDS |
| ACGGGATGGAGGGGCGGCGA+GGG | 0.470478 | 7_1:+19983058 | Msa1013430:CDS |
| ATTTGAGATGTTTGCAAGCA+CGG | 0.481705 | 7_1:+19982572 | Msa1013430:CDS |
| CTGAAGATGCAGTGGCTCTA+GGG | 0.484040 | 7_1:-19984022 | None:intergenic |
| TGCTGTTAAGTTGGTTCGCG+TGG | 0.489946 | 7_1:-19982516 | None:intergenic |
| ACGGAAGATTTGAATTCGAC+GGG | 0.493337 | 7_1:+19983040 | Msa1013430:CDS |
| CGCTCACAACCAGTCTTACA+AGG | 0.508995 | 7_1:+19984092 | Msa1013430:CDS |
| ATGATGAATACATACCCCTT+TGG | 0.517971 | 7_1:-19984163 | None:intergenic |
| CACCGCCACACTTCCACCAA+AGG | 0.519273 | 7_1:+19984147 | Msa1013430:CDS |
| TTTGAATTCGACGGGATGGA+GGG | 0.526851 | 7_1:+19983048 | Msa1013430:CDS |
| AAACATCTCAAATTGTGCAT+TGG | 0.528513 | 7_1:-19982562 | None:intergenic |
| AACGGAAGATTTGAATTCGA+CGG | 0.530675 | 7_1:+19983039 | Msa1013430:CDS |
| ATAACAGAGCCACCCTTCGC+CGG | 0.541157 | 7_1:+19983002 | Msa1013430:CDS |
| ATGAATACATACCCCTTTGG+TGG | 0.547453 | 7_1:-19984160 | None:intergenic |
| AATTCGACGGGATGGAGGGG+CGG | 0.548007 | 7_1:+19983052 | Msa1013430:CDS |
| AAGATTTGAATTCGACGGGA+TGG | 0.561342 | 7_1:+19983044 | Msa1013430:CDS |
| ATTTGAATTCGACGGGATGG+AGG | 0.570336 | 7_1:+19983047 | Msa1013430:CDS |
| GACGGTTCGTCGAGGTTCTG+CGG | 0.580529 | 7_1:-19982945 | None:intergenic |
| CCGGCGGCAAGGGTTGAAAA+CGG | 0.585127 | 7_1:+19983021 | Msa1013430:CDS |
| TTGAATTCGACGGGATGGAG+GGG | 0.588698 | 7_1:+19983049 | Msa1013430:CDS |
| ACCTAATTCTGAAGATGCAG+TGG | 0.589479 | 7_1:-19984030 | None:intergenic |
| GGTTTGTTGAATTTCAGAGA+TGG | 0.605195 | 7_1:+19984050 | Msa1013430:CDS |
| ATGGCATCAAGAAGCCAAAG+AGG | 0.617235 | 7_1:+19984124 | Msa1013430:CDS |
| ATACCCCTTTGGTGGAAGTG+TGG | 0.622392 | 7_1:-19984152 | None:intergenic |
| ACAGAGCCACCCTTCGCCGG+CGG | 0.622991 | 7_1:+19983005 | Msa1013430:CDS |
| CACACAATCGAAAATGAGTG+TGG | 0.630646 | 7_1:-19984619 | None:intergenic |
| CCCCTTTGGTGGAAGTGTGG+CGG | 0.635065 | 7_1:-19984149 | None:intergenic |
| TGTTCGGTGACGGTTCGTCG+AGG | 0.635846 | 7_1:-19982953 | None:intergenic |
| GGCTCTGTTATAACGAACCA+CGG | 0.640149 | 7_1:-19982990 | None:intergenic |
| TGATGCTGAAAGTGAGCTGT+GGG | 0.640992 | 7_1:+19984582 | Msa1013430:CDS |
| TTGATGCTGAAAGTGAGCTG+TGG | 0.659134 | 7_1:+19984581 | Msa1013430:CDS |
| CCGCCACACTTCCACCAAAG+GGG | 0.674155 | 7_1:+19984149 | Msa1013430:CDS |
| CTTGTAAGACTGGTTGTGAG+CGG | 0.674336 | 7_1:-19984091 | None:intergenic |
| GGTGAGTTCGACCGCCAACA+CGG | 0.678143 | 7_1:+19982481 | Msa1013430:CDS |
| ACAAAACGATCTGACCGCCG+TGG | 0.730426 | 7_1:+19982973 | Msa1013430:CDS |
| TCTGTTATAACGAACCACGG+CGG | 0.817339 | 7_1:-19982987 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TAAAGTATTTTTTTTTTGAA+AGG | - | chr7_1:19983162-19983181 | None:intergenic | 10.0% |
| !!! | AAATGTATTTTTTTTTTTTG+TGG | - | chr7_1:19983376-19983395 | None:intergenic | 10.0% |
| !!! | TATTATATTTTGATAATTCA+AGG | + | chr7_1:19983735-19983754 | Msa1013430:intron | 10.0% |
| !!! | AAAGAATTTTTTTTTTTTGA+GGG | + | chr7_1:19983809-19983828 | Msa1013430:intron | 10.0% |
| !!! | TAAAGTATTTTTTTTTTGAA+AGG | - | chr7_1:19983162-19983181 | None:intergenic | 10.0% |
| !!! | AAATGTATTTTTTTTTTTTG+TGG | - | chr7_1:19983376-19983395 | None:intergenic | 10.0% |
| !!! | TATTATATTTTGATAATTCA+AGG | + | chr7_1:19983735-19983754 | Msa1013430:intron | 10.0% |
| !!! | AAAGAATTTTTTTTTTTTGA+GGG | + | chr7_1:19983809-19983828 | Msa1013430:intron | 10.0% |
| !!! | ATATGTTTATTTTTTATAGG+TGG | + | chr7_1:19983104-19983123 | Msa1013430:intron | 15.0% |
| !!! | GAAAGAATTTTTTTTTTTTG+AGG | + | chr7_1:19983808-19983827 | Msa1013430:intron | 15.0% |
| !!! | TGATCTTTAAAAGTTTTAAA+CGG | + | chr7_1:19983899-19983918 | Msa1013430:intron | 15.0% |
| !! | TTTATAATTCATGTTATGTA+TGG | + | chr7_1:19984393-19984412 | Msa1013430:intron | 15.0% |
| !!! | ATATGTTTATTTTTTATAGG+TGG | + | chr7_1:19983104-19983123 | Msa1013430:intron | 15.0% |
| !!! | GAAAGAATTTTTTTTTTTTG+AGG | + | chr7_1:19983808-19983827 | Msa1013430:intron | 15.0% |
| !!! | TGATCTTTAAAAGTTTTAAA+CGG | + | chr7_1:19983899-19983918 | Msa1013430:intron | 15.0% |
| !! | TTTATAATTCATGTTATGTA+TGG | + | chr7_1:19984393-19984412 | Msa1013430:intron | 15.0% |
| !!! | CATTTTTTAATGTGAATAAG+CGG | + | chr7_1:19983226-19983245 | Msa1013430:intron | 20.0% |
| !!! | ATTTTTTAATGTGAATAAGC+GGG | + | chr7_1:19983227-19983246 | Msa1013430:intron | 20.0% |
| !! | GACATGTATTGTTATATATA+GGG | - | chr7_1:19983276-19983295 | None:intergenic | 20.0% |
| !! | TGACATGTATTGTTATATAT+AGG | - | chr7_1:19983277-19983296 | None:intergenic | 20.0% |
| !!! | TGTATTTTTTTTTTTTGTGG+TGG | - | chr7_1:19983373-19983392 | None:intergenic | 20.0% |
| !! | CAATATTAACAAGATTTACA+AGG | + | chr7_1:19983587-19983606 | Msa1013430:intron | 20.0% |
| !! | ATAAAGCAATTAATTGAACA+TGG | + | chr7_1:19983868-19983887 | Msa1013430:intron | 20.0% |
| !!! | GTTTAAAACTTTTAAAGATC+AGG | - | chr7_1:19983900-19983919 | None:intergenic | 20.0% |
| !! | TGTATGTATATATATCTGTT+GGG | - | chr7_1:19983980-19983999 | None:intergenic | 20.0% |
| !!! | CATTTTTTAATGTGAATAAG+CGG | + | chr7_1:19983226-19983245 | Msa1013430:intron | 20.0% |
| !!! | ATTTTTTAATGTGAATAAGC+GGG | + | chr7_1:19983227-19983246 | Msa1013430:intron | 20.0% |
| !! | GACATGTATTGTTATATATA+GGG | - | chr7_1:19983276-19983295 | None:intergenic | 20.0% |
| !! | TGACATGTATTGTTATATAT+AGG | - | chr7_1:19983277-19983296 | None:intergenic | 20.0% |
| !!! | TGTATTTTTTTTTTTTGTGG+TGG | - | chr7_1:19983373-19983392 | None:intergenic | 20.0% |
| !! | CAATATTAACAAGATTTACA+AGG | + | chr7_1:19983587-19983606 | Msa1013430:intron | 20.0% |
| !! | ATAAAGCAATTAATTGAACA+TGG | + | chr7_1:19983868-19983887 | Msa1013430:intron | 20.0% |
| !!! | GTTTAAAACTTTTAAAGATC+AGG | - | chr7_1:19983900-19983919 | None:intergenic | 20.0% |
| !! | TGTATGTATATATATCTGTT+GGG | - | chr7_1:19983980-19983999 | None:intergenic | 20.0% |
| !!! | TTTTTTAATGTGAATAAGCG+GGG | + | chr7_1:19983228-19983247 | Msa1013430:intron | 25.0% |
| !!! | CATTCCATATCATTTTTTAG+AGG | - | chr7_1:19983616-19983635 | None:intergenic | 25.0% |
| !!! | ATTAATCTCTCAACTAGTTT+TGG | - | chr7_1:19983660-19983679 | None:intergenic | 25.0% |
| ! | GTATGTATATATATCTGTTG+GGG | - | chr7_1:19983979-19983998 | None:intergenic | 25.0% |
| ! | GTGTATGTATATATATCTGT+TGG | - | chr7_1:19983981-19984000 | None:intergenic | 25.0% |
| ! | ACAGATATATATACATACAC+AGG | + | chr7_1:19983981-19984000 | Msa1013430:intron | 25.0% |
| !!! | TTTTTTAATGTGAATAAGCG+GGG | + | chr7_1:19983228-19983247 | Msa1013430:intron | 25.0% |
| !!! | CATTCCATATCATTTTTTAG+AGG | - | chr7_1:19983616-19983635 | None:intergenic | 25.0% |
| !!! | ATTAATCTCTCAACTAGTTT+TGG | - | chr7_1:19983660-19983679 | None:intergenic | 25.0% |
| ! | GTATGTATATATATCTGTTG+GGG | - | chr7_1:19983979-19983998 | None:intergenic | 25.0% |
| ! | GTGTATGTATATATATCTGT+TGG | - | chr7_1:19983981-19984000 | None:intergenic | 25.0% |
| ! | ACAGATATATATACATACAC+AGG | + | chr7_1:19983981-19984000 | Msa1013430:intron | 25.0% |
| !!! | AAGCATTTTTTGACTGACAT+GGG | - | chr7_1:19982452-19982471 | None:intergenic | 30.0% |
| AGTCAAAAAATGCTTGAAAG+TGG | + | chr7_1:19982457-19982476 | Msa1013430:CDS | 30.0% | |
| AAACATCTCAAATTGTGCAT+TGG | - | chr7_1:19982565-19982584 | None:intergenic | 30.0% | |
| ATTGTTATATATAGGGATCG+AGG | - | chr7_1:19983269-19983288 | None:intergenic | 30.0% | |
| TGAGTTTAACTCAGTTAGTA+GGG | + | chr7_1:19983306-19983325 | Msa1013430:intron | 30.0% | |
| GACATTGCATAAAATATGCA+AGG | + | chr7_1:19983328-19983347 | Msa1013430:intron | 30.0% | |
| ! | GACTCCTCTAAAAAATGATA+TGG | + | chr7_1:19983609-19983628 | Msa1013430:intron | 30.0% |
| ATGACTAATACATAACACCA+AGG | + | chr7_1:19983633-19983652 | Msa1013430:intron | 30.0% | |
| TTGTGATTGATTACTGTAGA+TGG | + | chr7_1:19984250-19984269 | Msa1013430:intron | 30.0% | |
| ! | AGAATTGATGGTCTAAATTC+AGG | - | chr7_1:19984548-19984567 | None:intergenic | 30.0% |
| ATCATAAACAGCAGAATTGA+TGG | - | chr7_1:19984560-19984579 | None:intergenic | 30.0% | |
| !!! | AAGCATTTTTTGACTGACAT+GGG | - | chr7_1:19982452-19982471 | None:intergenic | 30.0% |
| AGTCAAAAAATGCTTGAAAG+TGG | + | chr7_1:19982457-19982476 | Msa1013430:CDS | 30.0% | |
| AAACATCTCAAATTGTGCAT+TGG | - | chr7_1:19982565-19982584 | None:intergenic | 30.0% | |
| ATTGTTATATATAGGGATCG+AGG | - | chr7_1:19983269-19983288 | None:intergenic | 30.0% | |
| TGAGTTTAACTCAGTTAGTA+GGG | + | chr7_1:19983306-19983325 | Msa1013430:intron | 30.0% | |
| GACATTGCATAAAATATGCA+AGG | + | chr7_1:19983328-19983347 | Msa1013430:intron | 30.0% | |
| ! | GACTCCTCTAAAAAATGATA+TGG | + | chr7_1:19983609-19983628 | Msa1013430:intron | 30.0% |
| ATGACTAATACATAACACCA+AGG | + | chr7_1:19983633-19983652 | Msa1013430:intron | 30.0% | |
| TTGTGATTGATTACTGTAGA+TGG | + | chr7_1:19984250-19984269 | Msa1013430:intron | 30.0% | |
| ! | AGAATTGATGGTCTAAATTC+AGG | - | chr7_1:19984548-19984567 | None:intergenic | 30.0% |
| ATCATAAACAGCAGAATTGA+TGG | - | chr7_1:19984560-19984579 | None:intergenic | 30.0% | |
| !!! | CAAGCATTTTTTGACTGACA+TGG | - | chr7_1:19982453-19982472 | None:intergenic | 35.0% |
| CAAAAAATGCTTGAAAGTGG+AGG | + | chr7_1:19982460-19982479 | Msa1013430:CDS | 35.0% | |
| CTCTTAATCTGCTGTTAAGT+TGG | - | chr7_1:19982528-19982547 | None:intergenic | 35.0% | |
| ! | ATTTGAGATGTTTGCAAGCA+CGG | + | chr7_1:19982572-19982591 | Msa1013430:CDS | 35.0% |
| AAAAAAACAGCGAGCATACA+TGG | + | chr7_1:19982669-19982688 | Msa1013430:intron | 35.0% | |
| TTACTTTGATATACGCGATC+TGG | - | chr7_1:19982881-19982900 | None:intergenic | 35.0% | |
| !! | TTTTCTAGCAAGATCTGGAT+TGG | - | chr7_1:19982911-19982930 | None:intergenic | 35.0% |
| GTTCTGCGGTTTCAAAATTT+GGG | - | chr7_1:19982934-19982953 | None:intergenic | 35.0% | |
| AACGGAAGATTTGAATTCGA+CGG | + | chr7_1:19983039-19983058 | Msa1013430:CDS | 35.0% | |
| !!! | GCGAGGGTTTATTTTTTACA+AGG | + | chr7_1:19983074-19983093 | Msa1013430:intron | 35.0% |
| ! | TTTTGTCAACTATAGCCTAG+TGG | + | chr7_1:19983193-19983212 | Msa1013430:intron | 35.0% |
| TTTGTCAACTATAGCCTAGT+GGG | + | chr7_1:19983194-19983213 | Msa1013430:intron | 35.0% | |
| AAATGTGAATTCTACCCACT+AGG | - | chr7_1:19983211-19983230 | None:intergenic | 35.0% | |
| GTGAGTTTAACTCAGTTAGT+AGG | + | chr7_1:19983305-19983324 | Msa1013430:intron | 35.0% | |
| CATAAAATATGCAAGGTTCG+AGG | + | chr7_1:19983335-19983354 | Msa1013430:intron | 35.0% | |
| AATACATTTCATTGCCAACG+AGG | + | chr7_1:19983387-19983406 | Msa1013430:intron | 35.0% | |
| AGCAAAGTGTGATATTTGCA+GGG | - | chr7_1:19983449-19983468 | None:intergenic | 35.0% | |
| AAGCAAAGTGTGATATTTGC+AGG | - | chr7_1:19983450-19983469 | None:intergenic | 35.0% | |
| TATATATATCTGTTGGGGAC+GGG | - | chr7_1:19983974-19983993 | None:intergenic | 35.0% | |
| GTATATATATCTGTTGGGGA+CGG | - | chr7_1:19983975-19983994 | None:intergenic | 35.0% | |
| !! | GGTTTGTTGAATTTCAGAGA+TGG | + | chr7_1:19984050-19984069 | Msa1013430:CDS | 35.0% |
| !!! | CTTCTTGATGCCATTTTTGT+GGG | - | chr7_1:19984118-19984137 | None:intergenic | 35.0% |
| ATGATGAATACATACCCCTT+TGG | - | chr7_1:19984166-19984185 | None:intergenic | 35.0% | |
| ! | AGATGGATCCAAAGTTTTTG+AGG | + | chr7_1:19984267-19984286 | Msa1013430:intron | 35.0% |
| ! | CGGAAGCATAACAAGAAAAA+TGG | + | chr7_1:19984305-19984324 | Msa1013430:intron | 35.0% |
| !! | GTAAAGTGTCGATCTCTAAT+CGG | + | chr7_1:19984346-19984365 | Msa1013430:intron | 35.0% |
| !! | TAAAGTGTCGATCTCTAATC+GGG | + | chr7_1:19984347-19984366 | Msa1013430:intron | 35.0% |
| TATGTTCGACAGTACTTTGA+TGG | + | chr7_1:19984429-19984448 | Msa1013430:intron | 35.0% | |
| ! | TGCAGTACTGTTAGCATTTT+TGG | + | chr7_1:19984472-19984491 | Msa1013430:intron | 35.0% |
| ! | GCAGTACTGTTAGCATTTTT+GGG | + | chr7_1:19984473-19984492 | Msa1013430:intron | 35.0% |
| !!! | CAAGCATTTTTTGACTGACA+TGG | - | chr7_1:19982453-19982472 | None:intergenic | 35.0% |
| CAAAAAATGCTTGAAAGTGG+AGG | + | chr7_1:19982460-19982479 | Msa1013430:CDS | 35.0% | |
| CTCTTAATCTGCTGTTAAGT+TGG | - | chr7_1:19982528-19982547 | None:intergenic | 35.0% | |
| ! | ATTTGAGATGTTTGCAAGCA+CGG | + | chr7_1:19982572-19982591 | Msa1013430:CDS | 35.0% |
| AAAAAAACAGCGAGCATACA+TGG | + | chr7_1:19982669-19982688 | Msa1013430:intron | 35.0% | |
| TTACTTTGATATACGCGATC+TGG | - | chr7_1:19982881-19982900 | None:intergenic | 35.0% | |
| !! | TTTTCTAGCAAGATCTGGAT+TGG | - | chr7_1:19982911-19982930 | None:intergenic | 35.0% |
| GTTCTGCGGTTTCAAAATTT+GGG | - | chr7_1:19982934-19982953 | None:intergenic | 35.0% | |
| AACGGAAGATTTGAATTCGA+CGG | + | chr7_1:19983039-19983058 | Msa1013430:CDS | 35.0% | |
| !!! | GCGAGGGTTTATTTTTTACA+AGG | + | chr7_1:19983074-19983093 | Msa1013430:intron | 35.0% |
| ! | TTTTGTCAACTATAGCCTAG+TGG | + | chr7_1:19983193-19983212 | Msa1013430:intron | 35.0% |
| TTTGTCAACTATAGCCTAGT+GGG | + | chr7_1:19983194-19983213 | Msa1013430:intron | 35.0% | |
| AAATGTGAATTCTACCCACT+AGG | - | chr7_1:19983211-19983230 | None:intergenic | 35.0% | |
| GTGAGTTTAACTCAGTTAGT+AGG | + | chr7_1:19983305-19983324 | Msa1013430:intron | 35.0% | |
| CATAAAATATGCAAGGTTCG+AGG | + | chr7_1:19983335-19983354 | Msa1013430:intron | 35.0% | |
| AATACATTTCATTGCCAACG+AGG | + | chr7_1:19983387-19983406 | Msa1013430:intron | 35.0% | |
| AGCAAAGTGTGATATTTGCA+GGG | - | chr7_1:19983449-19983468 | None:intergenic | 35.0% | |
| AAGCAAAGTGTGATATTTGC+AGG | - | chr7_1:19983450-19983469 | None:intergenic | 35.0% | |
| TATATATATCTGTTGGGGAC+GGG | - | chr7_1:19983974-19983993 | None:intergenic | 35.0% | |
| GTATATATATCTGTTGGGGA+CGG | - | chr7_1:19983975-19983994 | None:intergenic | 35.0% | |
| !! | GGTTTGTTGAATTTCAGAGA+TGG | + | chr7_1:19984050-19984069 | Msa1013430:CDS | 35.0% |
| !!! | CTTCTTGATGCCATTTTTGT+GGG | - | chr7_1:19984118-19984137 | None:intergenic | 35.0% |
| ATGATGAATACATACCCCTT+TGG | - | chr7_1:19984166-19984185 | None:intergenic | 35.0% | |
| ! | AGATGGATCCAAAGTTTTTG+AGG | + | chr7_1:19984267-19984286 | Msa1013430:intron | 35.0% |
| ! | CGGAAGCATAACAAGAAAAA+TGG | + | chr7_1:19984305-19984324 | Msa1013430:intron | 35.0% |
| !! | GTAAAGTGTCGATCTCTAAT+CGG | + | chr7_1:19984346-19984365 | Msa1013430:intron | 35.0% |
| !! | TAAAGTGTCGATCTCTAATC+GGG | + | chr7_1:19984347-19984366 | Msa1013430:intron | 35.0% |
| TATGTTCGACAGTACTTTGA+TGG | + | chr7_1:19984429-19984448 | Msa1013430:intron | 35.0% | |
| ! | TGCAGTACTGTTAGCATTTT+TGG | + | chr7_1:19984472-19984491 | Msa1013430:intron | 35.0% |
| ! | GCAGTACTGTTAGCATTTTT+GGG | + | chr7_1:19984473-19984492 | Msa1013430:intron | 35.0% |
| !! | TAAACTTGTTAGCGTGTTGG+CGG | - | chr7_1:19982630-19982649 | None:intergenic | 40.0% |
| !! | GAGTAAACTTGTTAGCGTGT+TGG | - | chr7_1:19982633-19982652 | None:intergenic | 40.0% |
| !!! | GTTTTTTTGCAGTGGGTTGT+TGG | - | chr7_1:19982657-19982676 | None:intergenic | 40.0% |
| TAATCCTTCGTTGCCTTTCT+GGG | - | chr7_1:19982834-19982853 | None:intergenic | 40.0% | |
| ATAATCCTTCGTTGCCTTTC+TGG | - | chr7_1:19982835-19982854 | None:intergenic | 40.0% | |
| !! | TTGGGTTTTCTAGCAAGATC+TGG | - | chr7_1:19982916-19982935 | None:intergenic | 40.0% |
| GGTTCTGCGGTTTCAAAATT+TGG | - | chr7_1:19982935-19982954 | None:intergenic | 40.0% | |
| ACGGAAGATTTGAATTCGAC+GGG | + | chr7_1:19983040-19983059 | Msa1013430:CDS | 40.0% | |
| AAGATTTGAATTCGACGGGA+TGG | + | chr7_1:19983044-19983063 | Msa1013430:CDS | 40.0% | |
| CTAACTGAGTTAAACTCACG+AGG | - | chr7_1:19983304-19983323 | None:intergenic | 40.0% | |
| TTGCCAACGAGGTTATGTTT+AGG | + | chr7_1:19983398-19983417 | Msa1013430:intron | 40.0% | |
| TCTCCTAAACATAACCTCGT+TGG | - | chr7_1:19983404-19983423 | None:intergenic | 40.0% | |
| ! | CACTTTAGTTCGTACTTCGT+GGG | - | chr7_1:19983549-19983568 | None:intergenic | 40.0% |
| ! | TCACTTTAGTTCGTACTTCG+TGG | - | chr7_1:19983550-19983569 | None:intergenic | 40.0% |
| !!! | TCTCAACTAGTTTTGGTCCT+TGG | - | chr7_1:19983653-19983672 | None:intergenic | 40.0% |
| ! | ACCTAATTCTGAAGATGCAG+TGG | - | chr7_1:19984033-19984052 | None:intergenic | 40.0% |
| TCTTACAAGGCCCACAAAAA+TGG | + | chr7_1:19984105-19984124 | Msa1013430:CDS | 40.0% | |
| !!! | GCTTCTTGATGCCATTTTTG+TGG | - | chr7_1:19984119-19984138 | None:intergenic | 40.0% |
| ATGAATACATACCCCTTTGG+TGG | - | chr7_1:19984163-19984182 | None:intergenic | 40.0% | |
| ! | CTCTGGTTCCTCAAAAACTT+TGG | - | chr7_1:19984278-19984297 | None:intergenic | 40.0% |
| !! | CAAAGTTTTTGAGGAACCAG+AGG | + | chr7_1:19984276-19984295 | Msa1013430:CDS | 40.0% |
| CACACAATCGAAAATGAGTG+TGG | - | chr7_1:19984622-19984641 | None:intergenic | 40.0% | |
| !! | TAAACTTGTTAGCGTGTTGG+CGG | - | chr7_1:19982630-19982649 | None:intergenic | 40.0% |
| !! | GAGTAAACTTGTTAGCGTGT+TGG | - | chr7_1:19982633-19982652 | None:intergenic | 40.0% |
| !!! | GTTTTTTTGCAGTGGGTTGT+TGG | - | chr7_1:19982657-19982676 | None:intergenic | 40.0% |
| TAATCCTTCGTTGCCTTTCT+GGG | - | chr7_1:19982834-19982853 | None:intergenic | 40.0% | |
| ATAATCCTTCGTTGCCTTTC+TGG | - | chr7_1:19982835-19982854 | None:intergenic | 40.0% | |
| !! | TTGGGTTTTCTAGCAAGATC+TGG | - | chr7_1:19982916-19982935 | None:intergenic | 40.0% |
| GGTTCTGCGGTTTCAAAATT+TGG | - | chr7_1:19982935-19982954 | None:intergenic | 40.0% | |
| ACGGAAGATTTGAATTCGAC+GGG | + | chr7_1:19983040-19983059 | Msa1013430:CDS | 40.0% | |
| AAGATTTGAATTCGACGGGA+TGG | + | chr7_1:19983044-19983063 | Msa1013430:CDS | 40.0% | |
| CTAACTGAGTTAAACTCACG+AGG | - | chr7_1:19983304-19983323 | None:intergenic | 40.0% | |
| TTGCCAACGAGGTTATGTTT+AGG | + | chr7_1:19983398-19983417 | Msa1013430:intron | 40.0% | |
| TCTCCTAAACATAACCTCGT+TGG | - | chr7_1:19983404-19983423 | None:intergenic | 40.0% | |
| ! | CACTTTAGTTCGTACTTCGT+GGG | - | chr7_1:19983549-19983568 | None:intergenic | 40.0% |
| ! | TCACTTTAGTTCGTACTTCG+TGG | - | chr7_1:19983550-19983569 | None:intergenic | 40.0% |
| !!! | TCTCAACTAGTTTTGGTCCT+TGG | - | chr7_1:19983653-19983672 | None:intergenic | 40.0% |
| ! | ACCTAATTCTGAAGATGCAG+TGG | - | chr7_1:19984033-19984052 | None:intergenic | 40.0% |
| TCTTACAAGGCCCACAAAAA+TGG | + | chr7_1:19984105-19984124 | Msa1013430:CDS | 40.0% | |
| !!! | GCTTCTTGATGCCATTTTTG+TGG | - | chr7_1:19984119-19984138 | None:intergenic | 40.0% |
| ATGAATACATACCCCTTTGG+TGG | - | chr7_1:19984163-19984182 | None:intergenic | 40.0% | |
| ! | CTCTGGTTCCTCAAAAACTT+TGG | - | chr7_1:19984278-19984297 | None:intergenic | 40.0% |
| !! | CAAAGTTTTTGAGGAACCAG+AGG | + | chr7_1:19984276-19984295 | Msa1013430:CDS | 40.0% |
| CACACAATCGAAAATGAGTG+TGG | - | chr7_1:19984622-19984641 | None:intergenic | 40.0% | |
| !!! | TTCGCTTTTTACCGTGTTGG+CGG | - | chr7_1:19982495-19982514 | None:intergenic | 45.0% |
| !!! | GGATTCGCTTTTTACCGTGT+TGG | - | chr7_1:19982498-19982517 | None:intergenic | 45.0% |
| ATGTTTGCAAGCACGGAACT+TGG | + | chr7_1:19982579-19982598 | Msa1013430:CDS | 45.0% | |
| ! | AGCACGGAACTTGGATTTTG+AGG | + | chr7_1:19982588-19982607 | Msa1013430:CDS | 45.0% |
| ! | GCACGGAACTTGGATTTTGA+GGG | + | chr7_1:19982589-19982608 | Msa1013430:CDS | 45.0% |
| !!! | GCTCGCTGTTTTTTTGCAGT+GGG | - | chr7_1:19982664-19982683 | None:intergenic | 45.0% |
| !!! | TGCTCGCTGTTTTTTTGCAG+TGG | - | chr7_1:19982665-19982684 | None:intergenic | 45.0% |
| !! | CGTCTTGGTTGGTTTCTCAA+CGG | - | chr7_1:19982754-19982773 | None:intergenic | 45.0% |
| TGTGTAGTCATCGTCTTGGT+TGG | - | chr7_1:19982765-19982784 | None:intergenic | 45.0% | |
| TCGATGTGTAGTCATCGTCT+TGG | - | chr7_1:19982769-19982788 | None:intergenic | 45.0% | |
| !! | CAGATCGTTTTGTTCGGTGA+CGG | - | chr7_1:19982966-19982985 | None:intergenic | 45.0% |
| TCTGTTATAACGAACCACGG+CGG | - | chr7_1:19982990-19983009 | None:intergenic | 45.0% | |
| GGCTCTGTTATAACGAACCA+CGG | - | chr7_1:19982993-19983012 | None:intergenic | 45.0% | |
| ATTTGAATTCGACGGGATGG+AGG | + | chr7_1:19983047-19983066 | Msa1013430:CDS | 45.0% | |
| TTTGAATTCGACGGGATGGA+GGG | + | chr7_1:19983048-19983067 | Msa1013430:CDS | 45.0% | |
| ! | ATGTGAATAAGCGGGGTGTT+CGG | + | chr7_1:19983235-19983254 | Msa1013430:intron | 45.0% |
| TGTTACTACCATCCAAAGCG+AGG | + | chr7_1:19983931-19983950 | Msa1013430:intron | 45.0% | |
| GTTACTACCATCCAAAGCGA+GGG | + | chr7_1:19983932-19983951 | Msa1013430:intron | 45.0% | |
| !!! | AGTGGCTCTAGGGTTTTGTT+CGG | - | chr7_1:19984015-19984034 | None:intergenic | 45.0% |
| GCCACTGCATCTTCAGAATT+AGG | + | chr7_1:19984029-19984048 | Msa1013430:CDS | 45.0% | |
| ! | CTTGTAAGACTGGTTGTGAG+CGG | - | chr7_1:19984094-19984113 | None:intergenic | 45.0% |
| !! | TTTTGTGGGCCTTGTAAGAC+TGG | - | chr7_1:19984104-19984123 | None:intergenic | 45.0% |
| ATGGCATCAAGAAGCCAAAG+AGG | + | chr7_1:19984124-19984143 | Msa1013430:CDS | 45.0% | |
| TTGATGCTGAAAGTGAGCTG+TGG | + | chr7_1:19984581-19984600 | Msa1013430:CDS | 45.0% | |
| TGATGCTGAAAGTGAGCTGT+GGG | + | chr7_1:19984582-19984601 | Msa1013430:CDS | 45.0% | |
| !!! | TTCGCTTTTTACCGTGTTGG+CGG | - | chr7_1:19982495-19982514 | None:intergenic | 45.0% |
| !!! | GGATTCGCTTTTTACCGTGT+TGG | - | chr7_1:19982498-19982517 | None:intergenic | 45.0% |
| ATGTTTGCAAGCACGGAACT+TGG | + | chr7_1:19982579-19982598 | Msa1013430:CDS | 45.0% | |
| ! | AGCACGGAACTTGGATTTTG+AGG | + | chr7_1:19982588-19982607 | Msa1013430:CDS | 45.0% |
| ! | GCACGGAACTTGGATTTTGA+GGG | + | chr7_1:19982589-19982608 | Msa1013430:CDS | 45.0% |
| !!! | GCTCGCTGTTTTTTTGCAGT+GGG | - | chr7_1:19982664-19982683 | None:intergenic | 45.0% |
| !!! | TGCTCGCTGTTTTTTTGCAG+TGG | - | chr7_1:19982665-19982684 | None:intergenic | 45.0% |
| !! | CGTCTTGGTTGGTTTCTCAA+CGG | - | chr7_1:19982754-19982773 | None:intergenic | 45.0% |
| TGTGTAGTCATCGTCTTGGT+TGG | - | chr7_1:19982765-19982784 | None:intergenic | 45.0% | |
| TCGATGTGTAGTCATCGTCT+TGG | - | chr7_1:19982769-19982788 | None:intergenic | 45.0% | |
| !! | CAGATCGTTTTGTTCGGTGA+CGG | - | chr7_1:19982966-19982985 | None:intergenic | 45.0% |
| TCTGTTATAACGAACCACGG+CGG | - | chr7_1:19982990-19983009 | None:intergenic | 45.0% | |
| GGCTCTGTTATAACGAACCA+CGG | - | chr7_1:19982993-19983012 | None:intergenic | 45.0% | |
| ATTTGAATTCGACGGGATGG+AGG | + | chr7_1:19983047-19983066 | Msa1013430:CDS | 45.0% | |
| TTTGAATTCGACGGGATGGA+GGG | + | chr7_1:19983048-19983067 | Msa1013430:CDS | 45.0% | |
| ! | ATGTGAATAAGCGGGGTGTT+CGG | + | chr7_1:19983235-19983254 | Msa1013430:intron | 45.0% |
| TGTTACTACCATCCAAAGCG+AGG | + | chr7_1:19983931-19983950 | Msa1013430:intron | 45.0% | |
| GTTACTACCATCCAAAGCGA+GGG | + | chr7_1:19983932-19983951 | Msa1013430:intron | 45.0% | |
| !!! | AGTGGCTCTAGGGTTTTGTT+CGG | - | chr7_1:19984015-19984034 | None:intergenic | 45.0% |
| GCCACTGCATCTTCAGAATT+AGG | + | chr7_1:19984029-19984048 | Msa1013430:CDS | 45.0% | |
| ! | CTTGTAAGACTGGTTGTGAG+CGG | - | chr7_1:19984094-19984113 | None:intergenic | 45.0% |
| !! | TTTTGTGGGCCTTGTAAGAC+TGG | - | chr7_1:19984104-19984123 | None:intergenic | 45.0% |
| ATGGCATCAAGAAGCCAAAG+AGG | + | chr7_1:19984124-19984143 | Msa1013430:CDS | 45.0% | |
| TTGATGCTGAAAGTGAGCTG+TGG | + | chr7_1:19984581-19984600 | Msa1013430:CDS | 45.0% | |
| TGATGCTGAAAGTGAGCTGT+GGG | + | chr7_1:19984582-19984601 | Msa1013430:CDS | 45.0% | |
| !!! | TATATATGTTTATTTTTTAT+AGG | + | chr7_1:19983101-19983120 | Msa1013430:intron | 5.0% |
| !! | AATTATCAAAATATAATAAA+TGG | - | chr7_1:19983733-19983752 | None:intergenic | 5.0% |
| !!! | TATATATGTTTATTTTTTAT+AGG | + | chr7_1:19983101-19983120 | Msa1013430:intron | 5.0% |
| !! | AATTATCAAAATATAATAAA+TGG | - | chr7_1:19983733-19983752 | None:intergenic | 5.0% |
| !! | TGCTGTTAAGTTGGTTCGCG+TGG | - | chr7_1:19982519-19982538 | None:intergenic | 50.0% |
| !! | CGGAACTTGGATTTTGAGGG+TGG | + | chr7_1:19982592-19982611 | Msa1013430:CDS | 50.0% |
| !! | CTTGGATTTTGAGGGTGGTG+AGG | + | chr7_1:19982597-19982616 | Msa1013430:CDS | 50.0% |
| ACCAGTCAAACGACCCAGAA+AGG | + | chr7_1:19982818-19982837 | Msa1013430:intron | 50.0% | |
| !! | GGCGGTCAGATCGTTTTGTT+CGG | - | chr7_1:19982972-19982991 | None:intergenic | 50.0% |
| TTGAATTCGACGGGATGGAG+GGG | + | chr7_1:19983049-19983068 | Msa1013430:CDS | 50.0% | |
| ! | TGTGAATAAGCGGGGTGTTC+GGG | + | chr7_1:19983236-19983255 | Msa1013430:intron | 50.0% |
| ! | ACTTACACCCTCGCTTTGGA+TGG | - | chr7_1:19983942-19983961 | None:intergenic | 50.0% |
| ! | CTGAAGATGCAGTGGCTCTA+GGG | - | chr7_1:19984025-19984044 | None:intergenic | 50.0% |
| TCTGAAGATGCAGTGGCTCT+AGG | - | chr7_1:19984026-19984045 | None:intergenic | 50.0% | |
| CGCTCACAACCAGTCTTACA+AGG | + | chr7_1:19984092-19984111 | Msa1013430:CDS | 50.0% | |
| ATACCCCTTTGGTGGAAGTG+TGG | - | chr7_1:19984155-19984174 | None:intergenic | 50.0% | |
| !! | TGCTGTTAAGTTGGTTCGCG+TGG | - | chr7_1:19982519-19982538 | None:intergenic | 50.0% |
| !! | CGGAACTTGGATTTTGAGGG+TGG | + | chr7_1:19982592-19982611 | Msa1013430:CDS | 50.0% |
| !! | CTTGGATTTTGAGGGTGGTG+AGG | + | chr7_1:19982597-19982616 | Msa1013430:CDS | 50.0% |
| ACCAGTCAAACGACCCAGAA+AGG | + | chr7_1:19982818-19982837 | Msa1013430:intron | 50.0% | |
| !! | GGCGGTCAGATCGTTTTGTT+CGG | - | chr7_1:19982972-19982991 | None:intergenic | 50.0% |
| TTGAATTCGACGGGATGGAG+GGG | + | chr7_1:19983049-19983068 | Msa1013430:CDS | 50.0% | |
| ! | TGTGAATAAGCGGGGTGTTC+GGG | + | chr7_1:19983236-19983255 | Msa1013430:intron | 50.0% |
| ! | ACTTACACCCTCGCTTTGGA+TGG | - | chr7_1:19983942-19983961 | None:intergenic | 50.0% |
| ! | CTGAAGATGCAGTGGCTCTA+GGG | - | chr7_1:19984025-19984044 | None:intergenic | 50.0% |
| TCTGAAGATGCAGTGGCTCT+AGG | - | chr7_1:19984026-19984045 | None:intergenic | 50.0% | |
| CGCTCACAACCAGTCTTACA+AGG | + | chr7_1:19984092-19984111 | Msa1013430:CDS | 50.0% | |
| ATACCCCTTTGGTGGAAGTG+TGG | - | chr7_1:19984155-19984174 | None:intergenic | 50.0% | |
| ! | TTGTTAGCGTGTTGGCGGTC+AGG | - | chr7_1:19982625-19982644 | None:intergenic | 55.0% |
| AGCCTAACAGTCCAGTGCCT+CGG | + | chr7_1:19982700-19982719 | Msa1013430:intron | 55.0% | |
| !! | ATCCGAGGCACTGGACTGTT+AGG | - | chr7_1:19982705-19982724 | None:intergenic | 55.0% |
| GTCCAGTGCCTCGGATAAGA+CGG | + | chr7_1:19982709-19982728 | Msa1013430:intron | 55.0% | |
| TGCCTCGGATAAGACGGTGA+CGG | + | chr7_1:19982715-19982734 | Msa1013430:intron | 55.0% | |
| GCCTTTCTGGGTCGTTTGAC+TGG | - | chr7_1:19982822-19982841 | None:intergenic | 55.0% | |
| ACGACCCAGAAAGGCAACGA+AGG | + | chr7_1:19982827-19982846 | Msa1013430:intron | 55.0% | |
| !! | ATACGCGATCTGGCTCTTCG+CGG | - | chr7_1:19982871-19982890 | None:intergenic | 55.0% |
| ACAAAACGATCTGACCGCCG+TGG | + | chr7_1:19982973-19982992 | Msa1013430:CDS | 55.0% | |
| ATAACAGAGCCACCCTTCGC+CGG | + | chr7_1:19983002-19983021 | Msa1013430:CDS | 55.0% | |
| ! | GTGAATAAGCGGGGTGTTCG+GGG | + | chr7_1:19983237-19983256 | Msa1013430:intron | 55.0% |
| CTGCACTTACACCCTCGCTT+TGG | - | chr7_1:19983946-19983965 | None:intergenic | 55.0% | |
| !!! | GGCTCTAGGGTTTTGTTCGG+CGG | - | chr7_1:19984012-19984031 | None:intergenic | 55.0% |
| ACCGCCACACTTCCACCAAA+GGG | + | chr7_1:19984148-19984167 | Msa1013430:CDS | 55.0% | |
| ! | TGAGGAACCAGAGGTACGCA+CGG | + | chr7_1:19984285-19984304 | Msa1013430:intron | 55.0% |
| TATGCTTCCGTGCGTACCTC+TGG | - | chr7_1:19984295-19984314 | None:intergenic | 55.0% | |
| ! | TTGTTAGCGTGTTGGCGGTC+AGG | - | chr7_1:19982625-19982644 | None:intergenic | 55.0% |
| AGCCTAACAGTCCAGTGCCT+CGG | + | chr7_1:19982700-19982719 | Msa1013430:intron | 55.0% | |
| !! | ATCCGAGGCACTGGACTGTT+AGG | - | chr7_1:19982705-19982724 | None:intergenic | 55.0% |
| GTCCAGTGCCTCGGATAAGA+CGG | + | chr7_1:19982709-19982728 | Msa1013430:intron | 55.0% | |
| TGCCTCGGATAAGACGGTGA+CGG | + | chr7_1:19982715-19982734 | Msa1013430:intron | 55.0% | |
| GCCTTTCTGGGTCGTTTGAC+TGG | - | chr7_1:19982822-19982841 | None:intergenic | 55.0% | |
| ACGACCCAGAAAGGCAACGA+AGG | + | chr7_1:19982827-19982846 | Msa1013430:intron | 55.0% | |
| !! | ATACGCGATCTGGCTCTTCG+CGG | - | chr7_1:19982871-19982890 | None:intergenic | 55.0% |
| ACAAAACGATCTGACCGCCG+TGG | + | chr7_1:19982973-19982992 | Msa1013430:CDS | 55.0% | |
| ATAACAGAGCCACCCTTCGC+CGG | + | chr7_1:19983002-19983021 | Msa1013430:CDS | 55.0% | |
| ! | GTGAATAAGCGGGGTGTTCG+GGG | + | chr7_1:19983237-19983256 | Msa1013430:intron | 55.0% |
| CTGCACTTACACCCTCGCTT+TGG | - | chr7_1:19983946-19983965 | None:intergenic | 55.0% | |
| !!! | GGCTCTAGGGTTTTGTTCGG+CGG | - | chr7_1:19984012-19984031 | None:intergenic | 55.0% |
| ACCGCCACACTTCCACCAAA+GGG | + | chr7_1:19984148-19984167 | Msa1013430:CDS | 55.0% | |
| ! | TGAGGAACCAGAGGTACGCA+CGG | + | chr7_1:19984285-19984304 | Msa1013430:intron | 55.0% |
| TATGCTTCCGTGCGTACCTC+TGG | - | chr7_1:19984295-19984314 | None:intergenic | 55.0% | |
| GGTGAGTTCGACCGCCAACA+CGG | + | chr7_1:19982481-19982500 | Msa1013430:CDS | 60.0% | |
| CACCGTCTTATCCGAGGCAC+TGG | - | chr7_1:19982714-19982733 | None:intergenic | 60.0% | |
| CACCGTCACCGTCTTATCCG+AGG | - | chr7_1:19982720-19982739 | None:intergenic | 60.0% | |
| ! | CTCGGATAAGACGGTGACGG+TGG | + | chr7_1:19982718-19982737 | Msa1013430:intron | 60.0% |
| ! | GGATAAGACGGTGACGGTGG+TGG | + | chr7_1:19982721-19982740 | Msa1013430:intron | 60.0% |
| ! | CTGGCTCTTCGCGGATCTGT+GGG | - | chr7_1:19982862-19982881 | None:intergenic | 60.0% |
| !! | TCTGGCTCTTCGCGGATCTG+TGG | - | chr7_1:19982863-19982882 | None:intergenic | 60.0% |
| GACGGTTCGTCGAGGTTCTG+CGG | - | chr7_1:19982948-19982967 | None:intergenic | 60.0% | |
| ! | TGTTCGGTGACGGTTCGTCG+AGG | - | chr7_1:19982956-19982975 | None:intergenic | 60.0% |
| ! | CCGTTTTCAACCCTTGCCGC+CGG | - | chr7_1:19983024-19983043 | None:intergenic | 60.0% |
| CCGGCGGCAAGGGTTGAAAA+CGG | + | chr7_1:19983021-19983040 | Msa1013430:CDS | 60.0% | |
| AATTCGACGGGATGGAGGGG+CGG | + | chr7_1:19983052-19983071 | Msa1013430:CDS | 60.0% | |
| GAAGTGTGGCGGTGCCTCTT+TGG | - | chr7_1:19984141-19984160 | None:intergenic | 60.0% | |
| CACCGCCACACTTCCACCAA+AGG | + | chr7_1:19984147-19984166 | Msa1013430:CDS | 60.0% | |
| ! | CCCCTTTGGTGGAAGTGTGG+CGG | - | chr7_1:19984152-19984171 | None:intergenic | 60.0% |
| CCGCCACACTTCCACCAAAG+GGG | + | chr7_1:19984149-19984168 | Msa1013430:CDS | 60.0% | |
| GGTGAGTTCGACCGCCAACA+CGG | + | chr7_1:19982481-19982500 | Msa1013430:CDS | 60.0% | |
| CACCGTCTTATCCGAGGCAC+TGG | - | chr7_1:19982714-19982733 | None:intergenic | 60.0% | |
| CACCGTCACCGTCTTATCCG+AGG | - | chr7_1:19982720-19982739 | None:intergenic | 60.0% | |
| ! | CTCGGATAAGACGGTGACGG+TGG | + | chr7_1:19982718-19982737 | Msa1013430:intron | 60.0% |
| ! | GGATAAGACGGTGACGGTGG+TGG | + | chr7_1:19982721-19982740 | Msa1013430:intron | 60.0% |
| ! | CTGGCTCTTCGCGGATCTGT+GGG | - | chr7_1:19982862-19982881 | None:intergenic | 60.0% |
| !! | TCTGGCTCTTCGCGGATCTG+TGG | - | chr7_1:19982863-19982882 | None:intergenic | 60.0% |
| GACGGTTCGTCGAGGTTCTG+CGG | - | chr7_1:19982948-19982967 | None:intergenic | 60.0% | |
| ! | TGTTCGGTGACGGTTCGTCG+AGG | - | chr7_1:19982956-19982975 | None:intergenic | 60.0% |
| ! | CCGTTTTCAACCCTTGCCGC+CGG | - | chr7_1:19983024-19983043 | None:intergenic | 60.0% |
| CCGGCGGCAAGGGTTGAAAA+CGG | + | chr7_1:19983021-19983040 | Msa1013430:CDS | 60.0% | |
| AATTCGACGGGATGGAGGGG+CGG | + | chr7_1:19983052-19983071 | Msa1013430:CDS | 60.0% | |
| GAAGTGTGGCGGTGCCTCTT+TGG | - | chr7_1:19984141-19984160 | None:intergenic | 60.0% | |
| CACCGCCACACTTCCACCAA+AGG | + | chr7_1:19984147-19984166 | Msa1013430:CDS | 60.0% | |
| ! | CCCCTTTGGTGGAAGTGTGG+CGG | - | chr7_1:19984152-19984171 | None:intergenic | 60.0% |
| CCGCCACACTTCCACCAAAG+GGG | + | chr7_1:19984149-19984168 | Msa1013430:CDS | 60.0% | |
| ACAGAGCCACCCTTCGCCGG+CGG | + | chr7_1:19983005-19983024 | Msa1013430:CDS | 70.0% | |
| CAACCCTTGCCGCCGGCGAA+GGG | - | chr7_1:19983017-19983036 | None:intergenic | 70.0% | |
| TCAACCCTTGCCGCCGGCGA+AGG | - | chr7_1:19983018-19983037 | None:intergenic | 70.0% | |
| ACAGAGCCACCCTTCGCCGG+CGG | + | chr7_1:19983005-19983024 | Msa1013430:CDS | 70.0% | |
| CAACCCTTGCCGCCGGCGAA+GGG | - | chr7_1:19983017-19983036 | None:intergenic | 70.0% | |
| TCAACCCTTGCCGCCGGCGA+AGG | - | chr7_1:19983018-19983037 | None:intergenic | 70.0% | |
| CCACCCTTCGCCGGCGGCAA+GGG | + | chr7_1:19983011-19983030 | Msa1013430:CDS | 75.0% | |
| ACGGGATGGAGGGGCGGCGA+GGG | + | chr7_1:19983058-19983077 | Msa1013430:CDS | 75.0% | |
| CCACCCTTCGCCGGCGGCAA+GGG | + | chr7_1:19983011-19983030 | Msa1013430:CDS | 75.0% | |
| ACGGGATGGAGGGGCGGCGA+GGG | + | chr7_1:19983058-19983077 | Msa1013430:CDS | 75.0% | |
| ! | GCCACCCTTCGCCGGCGGCA+AGG | + | chr7_1:19983010-19983029 | Msa1013430:CDS | 80.0% |
| ! | CCCTTGCCGCCGGCGAAGGG+TGG | - | chr7_1:19983014-19983033 | None:intergenic | 80.0% |
| ! | GACGGGATGGAGGGGCGGCG+AGG | + | chr7_1:19983057-19983076 | Msa1013430:CDS | 80.0% |
| ! | GCCACCCTTCGCCGGCGGCA+AGG | + | chr7_1:19983010-19983029 | Msa1013430:CDS | 80.0% |
| ! | CCCTTGCCGCCGGCGAAGGG+TGG | - | chr7_1:19983014-19983033 | None:intergenic | 80.0% |
| ! | GACGGGATGGAGGGGCGGCG+AGG | + | chr7_1:19983057-19983076 | Msa1013430:CDS | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_1 | gene | 19982445 | 19984642 | 19982445 | ID=Msa1013430;Name=Msa1013430 |
| chr7_1 | mRNA | 19982445 | 19984642 | 19982445 | ID=Msa1013430-mRNA-1;Parent=Msa1013430;Name=Msa1013430-mRNA-1;_AED=0.72;_eAED=0.72;_QI=0|0.25|0|0.6|1|1|5|0|223 |
| chr7_1 | exon | 19982445 | 19982618 | 19982445 | ID=Msa1013430-mRNA-1:exon:4822;Parent=Msa1013430-mRNA-1 |
| chr7_1 | exon | 19982866 | 19983079 | 19982866 | ID=Msa1013430-mRNA-1:exon:4823;Parent=Msa1013430-mRNA-1 |
| chr7_1 | exon | 19984003 | 19984170 | 19984003 | ID=Msa1013430-mRNA-1:exon:4824;Parent=Msa1013430-mRNA-1 |
| chr7_1 | exon | 19984269 | 19984297 | 19984269 | ID=Msa1013430-mRNA-1:exon:4825;Parent=Msa1013430-mRNA-1 |
| chr7_1 | exon | 19984556 | 19984642 | 19984556 | ID=Msa1013430-mRNA-1:exon:4826;Parent=Msa1013430-mRNA-1 |
| chr7_1 | CDS | 19982445 | 19982618 | 19982445 | ID=Msa1013430-mRNA-1:cds;Parent=Msa1013430-mRNA-1 |
| chr7_1 | CDS | 19982866 | 19983079 | 19982866 | ID=Msa1013430-mRNA-1:cds;Parent=Msa1013430-mRNA-1 |
| chr7_1 | CDS | 19984003 | 19984170 | 19984003 | ID=Msa1013430-mRNA-1:cds;Parent=Msa1013430-mRNA-1 |
| chr7_1 | CDS | 19984269 | 19984297 | 19984269 | ID=Msa1013430-mRNA-1:cds;Parent=Msa1013430-mRNA-1 |
| chr7_1 | CDS | 19984556 | 19984642 | 19984556 | ID=Msa1013430-mRNA-1:cds;Parent=Msa1013430-mRNA-1 |
| Gene Sequence |
| Protein sequence |
