Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0930890 | XP_003630927.1 | 94.118 | 153 | 0 | 1 | 1 | 144 | 2 | 154 | 2.33e-96 | 284 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0930890 | sp|P31674|RS15_ORYSJ | 84.314 | 153 | 15 | 1 | 1 | 144 | 2 | 154 | 3.36e-90 | 261 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0001760 | Msa0930890 | 0.808709 | 2.711194e-50 | -8.615850e-47 |
| Msa0027590 | Msa0930890 | 0.818754 | 1.661857e-52 | -8.615850e-47 |
| Msa0042510 | Msa0930890 | 0.832268 | 1.041483e-55 | -8.615850e-47 |
| Msa0071640 | Msa0930890 | 0.802292 | 6.013136e-49 | -8.615850e-47 |
| Msa0071760 | Msa0930890 | 0.808056 | 3.735185e-50 | -8.615850e-47 |
| Msa0076630 | Msa0930890 | 0.828323 | 9.580945e-55 | -8.615850e-47 |
| Msa0079560 | Msa0930890 | 0.850288 | 1.870429e-60 | -8.615850e-47 |
| Msa0086160 | Msa0930890 | 0.865763 | 4.662864e-65 | -8.615850e-47 |
| Msa0114600 | Msa0930890 | 0.865322 | 6.420904e-65 | -8.615850e-47 |
| Msa0602900 | Msa0930890 | 0.897136 | 1.882782e-76 | -8.615850e-47 |
| Msa0605600 | Msa0930890 | 0.850347 | 1.801419e-60 | -8.615850e-47 |
| Msa0605890 | Msa0930890 | 0.886015 | 4.936549e-72 | -8.615850e-47 |
| Msa0609120 | Msa0930890 | 0.832647 | 8.389000e-56 | -8.615850e-47 |
| Msa0619230 | Msa0930890 | 0.839773 | 1.296448e-57 | -8.615850e-47 |
| Msa0628230 | Msa0930890 | -0.822141 | 2.776644e-53 | -8.615850e-47 |
| Msa0643960 | Msa0930890 | 0.888828 | 4.176163e-73 | -8.615850e-47 |
| Msa0649890 | Msa0930890 | 0.853438 | 2.389183e-61 | -8.615850e-47 |
| Msa0656450 | Msa0930890 | 0.820740 | 5.845966e-53 | -8.615850e-47 |
| Msa0663400 | Msa0930890 | 0.865168 | 7.183038e-65 | -8.615850e-47 |
| Msa0681220 | Msa0930890 | 0.808395 | 3.162589e-50 | -8.615850e-47 |
| Msa0686550 | Msa0930890 | 0.854043 | 1.600785e-61 | -8.615850e-47 |
| Msa0694400 | Msa0930890 | 0.881527 | 2.229703e-70 | -8.615850e-47 |
| Msa0704860 | Msa0930890 | 0.824694 | 7.026790e-54 | -8.615850e-47 |
| Msa0708630 | Msa0930890 | 0.856024 | 4.254462e-62 | -8.615850e-47 |
| Msa0718560 | Msa0930890 | 0.828186 | 1.033964e-54 | -8.615850e-47 |
| Msa0741510 | Msa0930890 | 0.843261 | 1.562587e-58 | -8.615850e-47 |
| Msa0748350 | Msa0930890 | 0.817119 | 3.889588e-52 | -8.615850e-47 |
| Msa0749000 | Msa0930890 | 0.855127 | 7.769524e-62 | -8.615850e-47 |
| Msa0790450 | Msa0930890 | 0.851249 | 1.003433e-60 | -8.615850e-47 |
| Msa0796490 | Msa0930890 | 0.866083 | 3.694113e-65 | -8.615850e-47 |
| Msa0798590 | Msa0930890 | 0.810733 | 9.954993e-51 | -8.615850e-47 |
| Msa0834220 | Msa0930890 | 0.808114 | 3.630585e-50 | -8.615850e-47 |
| Msa0123290 | Msa0930890 | 0.826738 | 2.300987e-54 | -8.615850e-47 |
| Msa0127180 | Msa0930890 | 0.819187 | 1.324625e-52 | -8.615850e-47 |
| Msa0127230 | Msa0930890 | 0.841301 | 5.163544e-58 | -8.615850e-47 |
| Msa0128330 | Msa0930890 | 0.872579 | 2.852527e-67 | -8.615850e-47 |
| Msa0132460 | Msa0930890 | 0.855408 | 6.436747e-62 | -8.615850e-47 |
| Msa0134580 | Msa0930890 | 0.812725 | 3.668969e-51 | -8.615850e-47 |
| Msa0136400 | Msa0930890 | 0.821370 | 4.186215e-53 | -8.615850e-47 |
| Msa0146610 | Msa0930890 | 0.806071 | 9.826913e-50 | -8.615850e-47 |
| Msa0167860 | Msa0930890 | 0.906369 | 1.596434e-80 | -8.615850e-47 |
| Msa0168320 | Msa0930890 | 0.806709 | 7.212185e-50 | -8.615850e-47 |
| Msa0174580 | Msa0930890 | 0.869634 | 2.673894e-66 | -8.615850e-47 |
| Msa0182050 | Msa0930890 | 0.856346 | 3.422714e-62 | -8.615850e-47 |
| Msa0182100 | Msa0930890 | 0.894146 | 3.242627e-75 | -8.615850e-47 |
| Msa0187810 | Msa0930890 | 0.800108 | 1.682391e-48 | -8.615850e-47 |
| Msa0188740 | Msa0930890 | 0.820773 | 5.745510e-53 | -8.615850e-47 |
| Msa0191550 | Msa0930890 | 0.823543 | 1.309291e-53 | -8.615850e-47 |
| Msa0192300 | Msa0930890 | 0.858392 | 8.504056e-63 | -8.615850e-47 |
| Msa0192490 | Msa0930890 | 0.803595 | 3.233870e-49 | -8.615850e-47 |
| Msa0194940 | Msa0930890 | 0.839666 | 1.382337e-57 | -8.615850e-47 |
| Msa0225350 | Msa0930890 | 0.807292 | 5.428686e-50 | -8.615850e-47 |
| Msa0234850 | Msa0930890 | 0.836805 | 7.546691e-57 | -8.615850e-47 |
| Msa0234900 | Msa0930890 | 0.812772 | 3.583797e-51 | -8.615850e-47 |
| Msa0235050 | Msa0930890 | 0.813214 | 2.867034e-51 | -8.615850e-47 |
| Msa0237180 | Msa0930890 | 0.813986 | 1.938943e-51 | -8.615850e-47 |
| Msa0371490 | Msa0930890 | 0.802047 | 6.751018e-49 | -8.615850e-47 |
| Msa0377370 | Msa0930890 | 0.857461 | 1.606884e-62 | -8.615850e-47 |
| Msa0383690 | Msa0930890 | 0.843826 | 1.103199e-58 | -8.615850e-47 |
| Msa0388520 | Msa0930890 | 0.814244 | 1.700517e-51 | -8.615850e-47 |
| Msa0419710 | Msa0930890 | 0.853477 | 2.328311e-61 | -8.615850e-47 |
| Msa0426090 | Msa0930890 | 0.829527 | 4.896223e-55 | -8.615850e-47 |
| Msa0426250 | Msa0930890 | 0.855500 | 6.051666e-62 | -8.615850e-47 |
| Msa0432750 | Msa0930890 | 0.809452 | 1.879379e-50 | -8.615850e-47 |
| Msa0433060 | Msa0930890 | 0.822558 | 2.221909e-53 | -8.615850e-47 |
| Msa0450150 | Msa0930890 | 0.892445 | 1.577278e-74 | -8.615850e-47 |
| Msa0472480 | Msa0930890 | 0.819259 | 1.275693e-52 | -8.615850e-47 |
| Msa0479980 | Msa0930890 | 0.813767 | 2.167017e-51 | -8.615850e-47 |
| Msa0239420 | Msa0930890 | 0.809234 | 2.092915e-50 | -8.615850e-47 |
| Msa0270160 | Msa0930890 | 0.869262 | 3.532164e-66 | -8.615850e-47 |
| Msa0277600 | Msa0930890 | 0.894314 | 2.770964e-75 | -8.615850e-47 |
| Msa0281330 | Msa0930890 | 0.845020 | 5.268356e-59 | -8.615850e-47 |
| Msa0281370 | Msa0930890 | 0.846848 | 1.678757e-59 | -8.615850e-47 |
| Msa0301250 | Msa0930890 | 0.864246 | 1.396231e-64 | -8.615850e-47 |
| Msa0313060 | Msa0930890 | 0.874912 | 4.659739e-68 | -8.615850e-47 |
| Msa0315430 | Msa0930890 | 0.889969 | 1.504187e-73 | -8.615850e-47 |
| Msa0315660 | Msa0930890 | 0.804816 | 1.801694e-49 | -8.615850e-47 |
| Msa0511760 | Msa0930890 | 0.832448 | 9.398343e-56 | -8.615850e-47 |
| Msa0521730 | Msa0930890 | 0.817549 | 3.113440e-52 | -8.615850e-47 |
| Msa0524680 | Msa0930890 | 0.820972 | 5.170705e-53 | -8.615850e-47 |
| Msa0547920 | Msa0930890 | 0.894694 | 1.937284e-75 | -8.615850e-47 |
| Msa0550490 | Msa0930890 | 0.816774 | 4.649329e-52 | -8.615850e-47 |
| Msa0568380 | Msa0930890 | 0.817730 | 2.833638e-52 | -8.615850e-47 |
| Msa0573550 | Msa0930890 | 0.883956 | 2.891118e-71 | -8.615850e-47 |
| Msa0574780 | Msa0930890 | 0.920114 | 1.927129e-87 | -8.615850e-47 |
| Msa0578010 | Msa0930890 | 0.807895 | 4.042173e-50 | -8.615850e-47 |
| Msa0579830 | Msa0930890 | 0.851405 | 9.064739e-61 | -8.615850e-47 |
| Msa0585570 | Msa0930890 | 0.858290 | 9.120387e-63 | -8.615850e-47 |
| Msa0588020 | Msa0930890 | -0.826185 | 3.116614e-54 | -8.615850e-47 |
| Msa0597240 | Msa0930890 | 0.837089 | 6.383700e-57 | -8.615850e-47 |
| Msa0902730 | Msa0930890 | 0.835325 | 1.792289e-56 | -8.615850e-47 |
| Msa0929700 | Msa0930890 | 0.897010 | 2.126338e-76 | -8.615850e-47 |
| Msa0930890 | Msa0978470 | 0.832205 | 1.079529e-55 | -8.615850e-47 |
| Msa0930890 | Msa1013430 | 0.802360 | 5.822323e-49 | -8.615850e-47 |
| Msa0930890 | Msa1047020 | 0.823929 | 1.062852e-53 | -8.615850e-47 |
| Msa0930890 | Msa1068660 | 0.844311 | 8.178369e-59 | -8.615850e-47 |
| Msa0930890 | Msa1070810 | 0.817369 | 3.418280e-52 | -8.615850e-47 |
| Msa0930890 | Msa1080390 | 0.803858 | 2.851548e-49 | -8.615850e-47 |
| Msa0930890 | Msa1082050 | 0.838591 | 2.626515e-57 | -8.615850e-47 |
| Msa0930890 | Msa1085850 | 0.836395 | 9.594785e-57 | -8.615850e-47 |
| Msa0930890 | Msa1093500 | 0.841164 | 5.611091e-58 | -8.615850e-47 |
| Msa0930890 | Msa1118790 | 0.815066 | 1.118077e-51 | -8.615850e-47 |
| Msa0930890 | Msa1125900 | 0.803583 | 3.253381e-49 | -8.615850e-47 |
| Msa0930890 | Msa1126100 | 0.801477 | 8.840462e-49 | -8.615850e-47 |
| Msa0930890 | Msa1126690 | 0.846326 | 2.330035e-59 | -8.615850e-47 |
| Msa0930890 | Msa1130680 | 0.829609 | 4.676872e-55 | -8.615850e-47 |
| Msa0930890 | Msa1156830 | 0.826365 | 2.823656e-54 | -8.615850e-47 |
| Msa0930890 | Msa1158630 | 0.819371 | 1.202839e-52 | -8.615850e-47 |
| Msa0930890 | Msa1165210 | 0.837209 | 5.949460e-57 | -8.615850e-47 |
| Msa0930890 | Msa1180000 | 0.825825 | 3.795574e-54 | -8.615850e-47 |
| Msa0930890 | Msa1219760 | 0.825346 | 4.928333e-54 | -8.615850e-47 |
| Msa0930890 | Msa1235950 | 0.883598 | 3.916714e-71 | -8.615850e-47 |
| Msa0930890 | Msa1235980 | 0.883304 | 5.026192e-71 | -8.615850e-47 |
| Msa0930890 | Msa1237040 | 0.845555 | 3.775382e-59 | -8.615850e-47 |
| Msa0930890 | Msa1258540 | 0.801404 | 9.150420e-49 | -8.615850e-47 |
| Msa0930890 | Msa1269250 | -0.847109 | 1.423167e-59 | -8.615850e-47 |
| Msa0930890 | Msa1270640 | 0.816160 | 6.382511e-52 | -8.615850e-47 |
| Msa0930890 | Msa1270710 | 0.819881 | 9.199597e-53 | -8.615850e-47 |
| Msa0930890 | Msa1316100 | 0.809799 | 1.582435e-50 | -8.615850e-47 |
| Msa0930890 | Msa1317390 | 0.832961 | 7.011632e-56 | -8.615850e-47 |
| Msa0930890 | Msa1330730 | 0.812875 | 3.401938e-51 | -8.615850e-47 |
| Msa0930890 | Msa1333370 | 0.831714 | 1.427427e-55 | -8.615850e-47 |
| Msa0930890 | Msa1341780 | 0.857193 | 1.928743e-62 | -8.615850e-47 |
| Msa0930890 | Msa1344160 | 0.831582 | 1.538686e-55 | -8.615850e-47 |
| Msa0930890 | Msa1344190 | 0.827522 | 1.493178e-54 | -8.615850e-47 |
| Msa0930890 | Msa1351020 | 0.879632 | 1.063080e-69 | -8.615850e-47 |
| Msa0930890 | Msa1351910 | 0.829260 | 5.684741e-55 | -8.615850e-47 |
| Msa0930890 | Msa1367540 | 0.821566 | 3.770977e-53 | -8.615850e-47 |
| Msa0930890 | Msa1371410 | 0.816794 | 4.601188e-52 | -8.615850e-47 |
| Msa0930890 | Msa1385480 | 0.890796 | 7.122574e-74 | -8.615850e-47 |
| Msa0930890 | Msa1390760 | 0.842772 | 2.108393e-58 | -8.615850e-47 |
| Msa0930890 | Msa1403520 | 0.825934 | 3.574875e-54 | -8.615850e-47 |
| Msa0930890 | Msa1407550 | 0.902408 | 9.991216e-79 | -8.615850e-47 |
| Msa0930890 | Msa1413570 | 0.823981 | 1.033621e-53 | -8.615850e-47 |
| Msa0930890 | Msa1415620 | 0.818531 | 1.867124e-52 | -8.615850e-47 |
| Msa0930890 | Msa1424570 | 0.815672 | 8.198753e-52 | -8.615850e-47 |
| Msa0930890 | Msa1425070 | 0.803622 | 3.193273e-49 | -8.615850e-47 |
| Msa0930890 | Msa1432310 | 0.852098 | 5.767541e-61 | -8.615850e-47 |
| Msa0930890 | Msa1441220 | -0.838418 | 2.910110e-57 | -8.615850e-47 |
| Msa0930890 | Msa1446410 | 0.844375 | 7.859680e-59 | -8.615850e-47 |
| Msa0930890 | Msa1446510 | 0.806845 | 6.750353e-50 | -8.615850e-47 |
| Msa0930890 | Msa1450560 | 0.851883 | 6.639718e-61 | -8.615850e-47 |
| Msa0930890 | Msa1462580 | 0.814269 | 1.679188e-51 | -8.615850e-47 |
| Msa0930890 | Msa1463570 | 0.869402 | 3.181226e-66 | -8.615850e-47 |
| Msa0930890 | Msa1465700 | 0.874529 | 6.289272e-68 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0930890 | MtrunA17_Chr8g0391601 | 94.118 | 153 | 0 | 1 | 1 | 144 | 2 | 154 | 2.14e-100 | 284 |
| Msa0930890 | MtrunA17_Chr1g0184681 | 89.542 | 153 | 5 | 2 | 1 | 144 | 2 | 152 | 1.33e-93 | 267 |
| Msa0930890 | MtrunA17_Chr4g0038481 | 87.582 | 153 | 8 | 2 | 1 | 144 | 2 | 152 | 2.31e-82 | 238 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0930890 | AT5G09500.1 | 83.784 | 148 | 15 | 1 | 6 | 144 | 3 | 150 | 1.39e-85 | 247 |
| Msa0930890 | AT1G04270.1 | 86.275 | 153 | 10 | 2 | 1 | 144 | 2 | 152 | 9.95e-83 | 240 |
| Msa0930890 | AT5G09510.1 | 86.275 | 153 | 10 | 2 | 1 | 144 | 2 | 152 | 1.19e-82 | 239 |
| Msa0930890 | AT1G04270.2 | 86.184 | 152 | 11 | 2 | 1 | 144 | 2 | 151 | 4.47e-82 | 238 |
| Msa0930890 | AT5G09490.1 | 77.778 | 153 | 23 | 2 | 1 | 144 | 2 | 152 | 6.49e-81 | 235 |
| Msa0930890 | AT5G43640.1 | 81.208 | 149 | 19 | 1 | 5 | 144 | 1 | 149 | 8.43e-75 | 219 |
| Msa0930890 | AT5G09510.2 | 88.136 | 118 | 5 | 1 | 36 | 144 | 1 | 118 | 7.56e-63 | 188 |
| Msa0930890 | AT5G63070.1 | 60.256 | 156 | 47 | 2 | 4 | 144 | 5 | 160 | 8.29e-60 | 182 |
| Msa0930890 | AT1G33850.1 | 83.607 | 61 | 10 | 0 | 11 | 71 | 7 | 67 | 9.94e-20 | 77.8 |
Find 39 sgRNAs with CRISPR-Local
Find 196 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTTGATTTCAACTTGGTTAA+AGG | 0.236449 | 6_2:-79986883 | None:intergenic |
| GAGATGATTGGGAGCATTAT+TGG | 0.247005 | 6_2:+79986843 | Msa0930890:CDS |
| CAGTTTCAGAGGAGTTGATT+TGG | 0.292075 | 6_2:+79985605 | Msa0930890:CDS |
| CCAGGTCTACCATGCTTAAC+AGG | 0.341486 | 6_2:-79986954 | None:intergenic |
| TCAGTGCTCGTGCTCGTAGA+AGG | 0.367007 | 6_2:+79985670 | Msa0930890:CDS |
| TTCTTGAATGTTCTCTTCTT+CGG | 0.377124 | 6_2:-79985579 | None:intergenic |
| AGATGGGTCCTAACAGGTTC+GGG | 0.405557 | 6_2:-79986798 | None:intergenic |
| GTGAGAAGCCCGAACCTGTT+AGG | 0.409377 | 6_2:+79986790 | Msa0930890:intron |
| GATGCAGCAGCCGCCGCCGC+GGG | 0.422266 | 6_2:+79985552 | Msa0930890:CDS |
| TTACGAAGATGGGTCCTAAC+AGG | 0.435557 | 6_2:-79986804 | None:intergenic |
| AAGATGGGTCCTAACAGGTT+CGG | 0.450751 | 6_2:-79986799 | None:intergenic |
| CAATGATCATGTTACGAAGA+TGG | 0.465315 | 6_2:-79986815 | None:intergenic |
| ATCATTGTACCTGAGATGAT+TGG | 0.468347 | 6_2:+79986831 | Msa0930890:CDS |
| TTCAAGAAGTTCAGTTTCAG+AGG | 0.481387 | 6_2:+79985594 | Msa0930890:CDS |
| AGGTAATGACCGATCATCTC+AGG | 0.492365 | 6_2:-79986906 | None:intergenic |
| CCTGTTAAGCATGGTAGACC+TGG | 0.509940 | 6_2:+79986954 | Msa0930890:CDS |
| AATGATCATGTTACGAAGAT+GGG | 0.516658 | 6_2:-79986814 | None:intergenic |
| GCATTATTGGAGTGTACAAT+GGG | 0.517140 | 6_2:+79986856 | Msa0930890:CDS |
| CTTCGGTACTCCCGCGGCGG+CGG | 0.518043 | 6_2:-79985562 | None:intergenic |
| TTGGTGCTACTCACTCCTCC+AGG | 0.521787 | 6_2:+79986979 | Msa0930890:CDS |
| ATAATGCTCCCAATCATCTC+AGG | 0.528225 | 6_2:-79986840 | None:intergenic |
| TCATTGTACCTGAGATGATT+GGG | 0.539509 | 6_2:+79986832 | Msa0930890:CDS |
| GCTTACGAGTGAGACCTCTC+TGG | 0.541580 | 6_2:-79985695 | None:intergenic |
| TCTCAGGTTTGATTTCAACT+TGG | 0.546765 | 6_2:-79986890 | None:intergenic |
| AGCATTATTGGAGTGTACAA+TGG | 0.558872 | 6_2:+79986855 | Msa0930890:CDS |
| TCACTTGAGAGGAATGAACC+TGG | 0.566509 | 6_2:-79986997 | None:intergenic |
| AGATGCAGCAGCCGCCGCCG+CGG | 0.579389 | 6_2:+79985551 | Msa0930890:CDS |
| GAGTGAGTAGCACCAATACC+AGG | 0.584094 | 6_2:-79986972 | None:intergenic |
| GAAATCAAACCTGAGATGAT+CGG | 0.585387 | 6_2:+79986897 | Msa0930890:CDS |
| AAGCATGGTAGACCTGGTAT+TGG | 0.586812 | 6_2:+79986960 | Msa0930890:CDS |
| TCATACAAGCCTGTTAAGCA+TGG | 0.604339 | 6_2:+79986945 | Msa0930890:CDS |
| GAGCTTAACAAGCTCATCAG+TGG | 0.607114 | 6_2:-79985646 | None:intergenic |
| AGGTCTCACTCGTAAGCCCA+TGG | 0.623580 | 6_2:+79985701 | Msa0930890:CDS |
| AACAAGGTGATTCACTTGAG+AGG | 0.631770 | 6_2:-79987008 | None:intergenic |
| ATGAGATCGAGAATTCAGCT+AGG | 0.682732 | 6_2:-79986926 | None:intergenic |
| TCTCTTCTTCGGTACTCCCG+CGG | 0.697626 | 6_2:-79985568 | None:intergenic |
| CTTCTTCGGTACTCCCGCGG+CGG | 0.700206 | 6_2:-79985565 | None:intergenic |
| CTTGAGAGGAATGAACCTGG+AGG | 0.737810 | 6_2:-79986994 | None:intergenic |
| GCTCGTAGAAGGTTCCAGAG+AGG | 0.763484 | 6_2:+79985681 | Msa0930890:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTACTATTTTACAAATTTA+AGG | - | chr6_2:79985887-79985906 | None:intergenic | 10.0% |
| !! | TAAATTTGTAAAATAGTAAT+TGG | + | chr6_2:79985887-79985906 | Msa0930890:intron | 10.0% |
| !!! | TTTGTTATTTTTTTAATTTG+AGG | + | chr6_2:79986136-79986155 | Msa0930890:intron | 10.0% |
| !!! | ATTACTATTTTACAAATTTA+AGG | - | chr6_2:79985887-79985906 | None:intergenic | 10.0% |
| !! | TAAATTTGTAAAATAGTAAT+TGG | + | chr6_2:79985887-79985906 | Msa0930890:intron | 10.0% |
| !!! | TTTGTTATTTTTTTAATTTG+AGG | + | chr6_2:79986136-79986155 | Msa0930890:intron | 10.0% |
| !! | ATTACTATTATGCAAATTTA+AGG | - | chr6_2:79986202-79986221 | None:intergenic | 15.0% |
| !!! | AAAAAAAGTGTTCAATTTAA+GGG | - | chr6_2:79986230-79986249 | None:intergenic | 15.0% |
| !!! | AAAAAAAAGTGTTCAATTTA+AGG | - | chr6_2:79986231-79986250 | None:intergenic | 15.0% |
| !!! | GAACACTTTTTTTTTTTTTT+TGG | + | chr6_2:79986237-79986256 | Msa0930890:intron | 15.0% |
| !!! | TTTGTTATTCTTTTATTTAG+TGG | + | chr6_2:79986374-79986393 | Msa0930890:intron | 15.0% |
| !!! | ATTGTTATAATTTTGTGAAT+TGG | + | chr6_2:79986742-79986761 | Msa0930890:intron | 15.0% |
| !! | ATTACTATTATGCAAATTTA+AGG | - | chr6_2:79986202-79986221 | None:intergenic | 15.0% |
| !!! | AAAAAAAGTGTTCAATTTAA+GGG | - | chr6_2:79986230-79986249 | None:intergenic | 15.0% |
| !!! | AAAAAAAAGTGTTCAATTTA+AGG | - | chr6_2:79986231-79986250 | None:intergenic | 15.0% |
| !!! | GAACACTTTTTTTTTTTTTT+TGG | + | chr6_2:79986237-79986256 | Msa0930890:intron | 15.0% |
| !!! | TTTGTTATTCTTTTATTTAG+TGG | + | chr6_2:79986374-79986393 | Msa0930890:intron | 15.0% |
| !!! | ATTGTTATAATTTTGTGAAT+TGG | + | chr6_2:79986742-79986761 | Msa0930890:intron | 15.0% |
| !!! | GTTAGTATTTTGCATATTAA+AGG | - | chr6_2:79985855-79985874 | None:intergenic | 20.0% |
| !! | ATATGCAAAATACTAACAAT+TGG | + | chr6_2:79985858-79985877 | Msa0930890:intron | 20.0% |
| !! | TATGCAAAATACTAACAATT+GGG | + | chr6_2:79985859-79985878 | Msa0930890:intron | 20.0% |
| !!! | GAAGTTTTTATTGATTTTGT+TGG | + | chr6_2:79986310-79986329 | Msa0930890:intron | 20.0% |
| !!! | AGGACTAACATTAAAATTTT+TGG | - | chr6_2:79986412-79986431 | None:intergenic | 20.0% |
| !!! | ATTTAACACTACCATTTTAA+AGG | + | chr6_2:79986503-79986522 | Msa0930890:intron | 20.0% |
| !!! | TGGTGGTTTTTTAAATTTAA+AGG | + | chr6_2:79986641-79986660 | Msa0930890:intron | 20.0% |
| !!! | TTTGTTAATTTGTGAATTTG+AGG | + | chr6_2:79986669-79986688 | Msa0930890:intron | 20.0% |
| !!! | TTGTTAATTTGTGAATTTGA+GGG | + | chr6_2:79986670-79986689 | Msa0930890:intron | 20.0% |
| !! | TTTAGTACTTAAGATAGTAA+GGG | - | chr6_2:79986710-79986729 | None:intergenic | 20.0% |
| !!! | TTTTAGTACTTAAGATAGTA+AGG | - | chr6_2:79986711-79986730 | None:intergenic | 20.0% |
| !!! | GTTAGTATTTTGCATATTAA+AGG | - | chr6_2:79985855-79985874 | None:intergenic | 20.0% |
| !! | ATATGCAAAATACTAACAAT+TGG | + | chr6_2:79985858-79985877 | Msa0930890:intron | 20.0% |
| !! | TATGCAAAATACTAACAATT+GGG | + | chr6_2:79985859-79985878 | Msa0930890:intron | 20.0% |
| !!! | GAAGTTTTTATTGATTTTGT+TGG | + | chr6_2:79986310-79986329 | Msa0930890:intron | 20.0% |
| !!! | AGGACTAACATTAAAATTTT+TGG | - | chr6_2:79986412-79986431 | None:intergenic | 20.0% |
| !!! | ATTTAACACTACCATTTTAA+AGG | + | chr6_2:79986503-79986522 | Msa0930890:intron | 20.0% |
| !!! | TGGTGGTTTTTTAAATTTAA+AGG | + | chr6_2:79986641-79986660 | Msa0930890:intron | 20.0% |
| !!! | TTTGTTAATTTGTGAATTTG+AGG | + | chr6_2:79986669-79986688 | Msa0930890:intron | 20.0% |
| !!! | TTGTTAATTTGTGAATTTGA+GGG | + | chr6_2:79986670-79986689 | Msa0930890:intron | 20.0% |
| !! | TTTAGTACTTAAGATAGTAA+GGG | - | chr6_2:79986710-79986729 | None:intergenic | 20.0% |
| !!! | TTTTAGTACTTAAGATAGTA+AGG | - | chr6_2:79986711-79986730 | None:intergenic | 20.0% |
| !! | AAACAACAATCTTAGCATTT+TGG | + | chr6_2:79985812-79985831 | Msa0930890:intron | 25.0% |
| !! | AACAACAATCTTAGCATTTT+GGG | + | chr6_2:79985813-79985832 | Msa0930890:intron | 25.0% |
| ! | AGTAATTGGATACCAAAAAT+TGG | + | chr6_2:79985901-79985920 | Msa0930890:intron | 25.0% |
| !! | ATATGACATTGTCCAATTTT+TGG | - | chr6_2:79985916-79985935 | None:intergenic | 25.0% |
| ! | AACATGAAACCATTAAAATG+GGG | - | chr6_2:79985978-79985997 | None:intergenic | 25.0% |
| ! | GAACATGAAACCATTAAAAT+GGG | - | chr6_2:79985979-79985998 | None:intergenic | 25.0% |
| ! | TGAACATGAAACCATTAAAA+TGG | - | chr6_2:79985980-79985999 | None:intergenic | 25.0% |
| !!! | CTCTTGTTGATTATTGATTT+TGG | + | chr6_2:79986049-79986068 | Msa0930890:intron | 25.0% |
| !!! | TTGTTGATTATTGATTTTGG+TGG | + | chr6_2:79986052-79986071 | Msa0930890:intron | 25.0% |
| !!! | TGTTGATTATTGATTTTGGT+GGG | + | chr6_2:79986053-79986072 | Msa0930890:intron | 25.0% |
| !!! | CTGAAGATATATTTTGATTG+AGG | + | chr6_2:79986082-79986101 | Msa0930890:intron | 25.0% |
| !!! | GAAATTGATTGCTGTTTTTA+GGG | + | chr6_2:79986108-79986127 | Msa0930890:intron | 25.0% |
| ! | AAGGAACTAAATTGATATCT+TGG | - | chr6_2:79986183-79986202 | None:intergenic | 25.0% |
| !!! | TATGCCTTTTCAAGTTTATA+TGG | + | chr6_2:79986288-79986307 | Msa0930890:intron | 25.0% |
| ! | ACTTCCATATAAACTTGAAA+AGG | - | chr6_2:79986295-79986314 | None:intergenic | 25.0% |
| !! | GTGCTAATTTGCAAATATAA+AGG | - | chr6_2:79986432-79986451 | None:intergenic | 25.0% |
| ! | AATAGCGATATTTAGGTATA+GGG | + | chr6_2:79986607-79986626 | Msa0930890:intron | 25.0% |
| !! | TTTGATTTCAACTTGGTTAA+AGG | - | chr6_2:79986886-79986905 | None:intergenic | 25.0% |
| !! | AAACAACAATCTTAGCATTT+TGG | + | chr6_2:79985812-79985831 | Msa0930890:intron | 25.0% |
| !! | AACAACAATCTTAGCATTTT+GGG | + | chr6_2:79985813-79985832 | Msa0930890:intron | 25.0% |
| ! | AGTAATTGGATACCAAAAAT+TGG | + | chr6_2:79985901-79985920 | Msa0930890:intron | 25.0% |
| !! | ATATGACATTGTCCAATTTT+TGG | - | chr6_2:79985916-79985935 | None:intergenic | 25.0% |
| ! | AACATGAAACCATTAAAATG+GGG | - | chr6_2:79985978-79985997 | None:intergenic | 25.0% |
| ! | GAACATGAAACCATTAAAAT+GGG | - | chr6_2:79985979-79985998 | None:intergenic | 25.0% |
| ! | TGAACATGAAACCATTAAAA+TGG | - | chr6_2:79985980-79985999 | None:intergenic | 25.0% |
| !!! | CTCTTGTTGATTATTGATTT+TGG | + | chr6_2:79986049-79986068 | Msa0930890:intron | 25.0% |
| !!! | TTGTTGATTATTGATTTTGG+TGG | + | chr6_2:79986052-79986071 | Msa0930890:intron | 25.0% |
| !!! | TGTTGATTATTGATTTTGGT+GGG | + | chr6_2:79986053-79986072 | Msa0930890:intron | 25.0% |
| !!! | CTGAAGATATATTTTGATTG+AGG | + | chr6_2:79986082-79986101 | Msa0930890:intron | 25.0% |
| !!! | GAAATTGATTGCTGTTTTTA+GGG | + | chr6_2:79986108-79986127 | Msa0930890:intron | 25.0% |
| ! | AAGGAACTAAATTGATATCT+TGG | - | chr6_2:79986183-79986202 | None:intergenic | 25.0% |
| !!! | TATGCCTTTTCAAGTTTATA+TGG | + | chr6_2:79986288-79986307 | Msa0930890:intron | 25.0% |
| ! | ACTTCCATATAAACTTGAAA+AGG | - | chr6_2:79986295-79986314 | None:intergenic | 25.0% |
| !! | GTGCTAATTTGCAAATATAA+AGG | - | chr6_2:79986432-79986451 | None:intergenic | 25.0% |
| ! | AATAGCGATATTTAGGTATA+GGG | + | chr6_2:79986607-79986626 | Msa0930890:intron | 25.0% |
| !! | TTTGATTTCAACTTGGTTAA+AGG | - | chr6_2:79986886-79986905 | None:intergenic | 25.0% |
| TTCTTGAATGTTCTCTTCTT+CGG | - | chr6_2:79985582-79985601 | None:intergenic | 30.0% | |
| ! | TTAAAATGGGGTACTAAAGT+CGG | - | chr6_2:79985966-79985985 | None:intergenic | 30.0% |
| ! | ACTTTAGTACCCCATTTTAA+TGG | + | chr6_2:79985966-79985985 | Msa0930890:intron | 30.0% |
| !!! | CGAAATTGATTGCTGTTTTT+AGG | + | chr6_2:79986107-79986126 | Msa0930890:intron | 30.0% |
| AAGGCATATAACCTTCAAAA+TGG | - | chr6_2:79986276-79986295 | None:intergenic | 30.0% | |
| ! | ACGCATGTAAACCTTTAAAA+TGG | - | chr6_2:79986517-79986536 | None:intergenic | 30.0% |
| CTTACTGAATAGCGATATTT+AGG | + | chr6_2:79986600-79986619 | Msa0930890:intron | 30.0% | |
| GAATAGCGATATTTAGGTAT+AGG | + | chr6_2:79986606-79986625 | Msa0930890:intron | 30.0% | |
| TTGTGAATTGGTTGTAGAAA+AGG | + | chr6_2:79986754-79986773 | Msa0930890:intron | 30.0% | |
| TGTGAATTGGTTGTAGAAAA+GGG | + | chr6_2:79986755-79986774 | Msa0930890:intron | 30.0% | |
| AATGATCATGTTACGAAGAT+GGG | - | chr6_2:79986817-79986836 | None:intergenic | 30.0% | |
| TTCTTGAATGTTCTCTTCTT+CGG | - | chr6_2:79985582-79985601 | None:intergenic | 30.0% | |
| ! | TTAAAATGGGGTACTAAAGT+CGG | - | chr6_2:79985966-79985985 | None:intergenic | 30.0% |
| ! | ACTTTAGTACCCCATTTTAA+TGG | + | chr6_2:79985966-79985985 | Msa0930890:intron | 30.0% |
| !!! | CGAAATTGATTGCTGTTTTT+AGG | + | chr6_2:79986107-79986126 | Msa0930890:intron | 30.0% |
| AAGGCATATAACCTTCAAAA+TGG | - | chr6_2:79986276-79986295 | None:intergenic | 30.0% | |
| ! | ACGCATGTAAACCTTTAAAA+TGG | - | chr6_2:79986517-79986536 | None:intergenic | 30.0% |
| CTTACTGAATAGCGATATTT+AGG | + | chr6_2:79986600-79986619 | Msa0930890:intron | 30.0% | |
| GAATAGCGATATTTAGGTAT+AGG | + | chr6_2:79986606-79986625 | Msa0930890:intron | 30.0% | |
| TTGTGAATTGGTTGTAGAAA+AGG | + | chr6_2:79986754-79986773 | Msa0930890:intron | 30.0% | |
| TGTGAATTGGTTGTAGAAAA+GGG | + | chr6_2:79986755-79986774 | Msa0930890:intron | 30.0% | |
| AATGATCATGTTACGAAGAT+GGG | - | chr6_2:79986817-79986836 | None:intergenic | 30.0% | |
| TTCAAGAAGTTCAGTTTCAG+AGG | + | chr6_2:79985594-79985613 | Msa0930890:CDS | 35.0% | |
| ! | CAAAGTTACCACCATTTTGA+AGG | + | chr6_2:79986262-79986281 | Msa0930890:intron | 35.0% |
| GCATATAACCTTCAAAATGG+TGG | - | chr6_2:79986273-79986292 | None:intergenic | 35.0% | |
| ! | GTGACTCAGTGTTGAAATTA+AGG | - | chr6_2:79986462-79986481 | None:intergenic | 35.0% |
| GGTATAGGGACTAAATTGAT+TGG | + | chr6_2:79986621-79986640 | Msa0930890:intron | 35.0% | |
| ATAGGGACTAAATTGATTGG+TGG | + | chr6_2:79986624-79986643 | Msa0930890:intron | 35.0% | |
| CAATGATCATGTTACGAAGA+TGG | - | chr6_2:79986818-79986837 | None:intergenic | 35.0% | |
| ATCATTGTACCTGAGATGAT+TGG | + | chr6_2:79986831-79986850 | Msa0930890:CDS | 35.0% | |
| TCATTGTACCTGAGATGATT+GGG | + | chr6_2:79986832-79986851 | Msa0930890:CDS | 35.0% | |
| AGCATTATTGGAGTGTACAA+TGG | + | chr6_2:79986855-79986874 | Msa0930890:CDS | 35.0% | |
| GCATTATTGGAGTGTACAAT+GGG | + | chr6_2:79986856-79986875 | Msa0930890:CDS | 35.0% | |
| ! | TCTCAGGTTTGATTTCAACT+TGG | - | chr6_2:79986893-79986912 | None:intergenic | 35.0% |
| GAAATCAAACCTGAGATGAT+CGG | + | chr6_2:79986897-79986916 | Msa0930890:CDS | 35.0% | |
| TTCAAGAAGTTCAGTTTCAG+AGG | + | chr6_2:79985594-79985613 | Msa0930890:CDS | 35.0% | |
| ! | CAAAGTTACCACCATTTTGA+AGG | + | chr6_2:79986262-79986281 | Msa0930890:intron | 35.0% |
| GCATATAACCTTCAAAATGG+TGG | - | chr6_2:79986273-79986292 | None:intergenic | 35.0% | |
| ! | GTGACTCAGTGTTGAAATTA+AGG | - | chr6_2:79986462-79986481 | None:intergenic | 35.0% |
| GGTATAGGGACTAAATTGAT+TGG | + | chr6_2:79986621-79986640 | Msa0930890:intron | 35.0% | |
| ATAGGGACTAAATTGATTGG+TGG | + | chr6_2:79986624-79986643 | Msa0930890:intron | 35.0% | |
| CAATGATCATGTTACGAAGA+TGG | - | chr6_2:79986818-79986837 | None:intergenic | 35.0% | |
| ATCATTGTACCTGAGATGAT+TGG | + | chr6_2:79986831-79986850 | Msa0930890:CDS | 35.0% | |
| TCATTGTACCTGAGATGATT+GGG | + | chr6_2:79986832-79986851 | Msa0930890:CDS | 35.0% | |
| AGCATTATTGGAGTGTACAA+TGG | + | chr6_2:79986855-79986874 | Msa0930890:CDS | 35.0% | |
| GCATTATTGGAGTGTACAAT+GGG | + | chr6_2:79986856-79986875 | Msa0930890:CDS | 35.0% | |
| ! | TCTCAGGTTTGATTTCAACT+TGG | - | chr6_2:79986893-79986912 | None:intergenic | 35.0% |
| GAAATCAAACCTGAGATGAT+CGG | + | chr6_2:79986897-79986916 | Msa0930890:CDS | 35.0% | |
| ! | CAGTTTCAGAGGAGTTGATT+TGG | + | chr6_2:79985605-79985624 | Msa0930890:CDS | 40.0% |
| ! | AGCTTTTTGATGAGAGCCAT+GGG | - | chr6_2:79985720-79985739 | None:intergenic | 40.0% |
| ! | AAGCTTTTTGATGAGAGCCA+TGG | - | chr6_2:79985721-79985740 | None:intergenic | 40.0% |
| CATCAAAAAGCTTCGCAAAG+CGG | + | chr6_2:79985728-79985747 | Msa0930890:CDS | 40.0% | |
| GAATTGGTTGTAGAAAAGGG+AGG | + | chr6_2:79986758-79986777 | Msa0930890:intron | 40.0% | |
| ATAATGCTCCCAATCATCTC+AGG | - | chr6_2:79986843-79986862 | None:intergenic | 40.0% | |
| !! | GAGATGATTGGGAGCATTAT+TGG | + | chr6_2:79986843-79986862 | Msa0930890:CDS | 40.0% |
| ATGAGATCGAGAATTCAGCT+AGG | - | chr6_2:79986929-79986948 | None:intergenic | 40.0% | |
| TCATACAAGCCTGTTAAGCA+TGG | + | chr6_2:79986945-79986964 | Msa0930890:CDS | 40.0% | |
| ! | CAGTTTCAGAGGAGTTGATT+TGG | + | chr6_2:79985605-79985624 | Msa0930890:CDS | 40.0% |
| ! | AGCTTTTTGATGAGAGCCAT+GGG | - | chr6_2:79985720-79985739 | None:intergenic | 40.0% |
| ! | AAGCTTTTTGATGAGAGCCA+TGG | - | chr6_2:79985721-79985740 | None:intergenic | 40.0% |
| CATCAAAAAGCTTCGCAAAG+CGG | + | chr6_2:79985728-79985747 | Msa0930890:CDS | 40.0% | |
| GAATTGGTTGTAGAAAAGGG+AGG | + | chr6_2:79986758-79986777 | Msa0930890:intron | 40.0% | |
| ATAATGCTCCCAATCATCTC+AGG | - | chr6_2:79986843-79986862 | None:intergenic | 40.0% | |
| !! | GAGATGATTGGGAGCATTAT+TGG | + | chr6_2:79986843-79986862 | Msa0930890:CDS | 40.0% |
| ATGAGATCGAGAATTCAGCT+AGG | - | chr6_2:79986929-79986948 | None:intergenic | 40.0% | |
| TCATACAAGCCTGTTAAGCA+TGG | + | chr6_2:79986945-79986964 | Msa0930890:CDS | 40.0% | |
| GAGCTTAACAAGCTCATCAG+TGG | - | chr6_2:79985649-79985668 | None:intergenic | 45.0% | |
| AAGATGGGTCCTAACAGGTT+CGG | - | chr6_2:79986802-79986821 | None:intergenic | 45.0% | |
| TTACGAAGATGGGTCCTAAC+AGG | - | chr6_2:79986807-79986826 | None:intergenic | 45.0% | |
| AGGTAATGACCGATCATCTC+AGG | - | chr6_2:79986909-79986928 | None:intergenic | 45.0% | |
| AAGCATGGTAGACCTGGTAT+TGG | + | chr6_2:79986960-79986979 | Msa0930890:CDS | 45.0% | |
| TCACTTGAGAGGAATGAACC+TGG | - | chr6_2:79987000-79987019 | None:intergenic | 45.0% | |
| GAGCTTAACAAGCTCATCAG+TGG | - | chr6_2:79985649-79985668 | None:intergenic | 45.0% | |
| AAGATGGGTCCTAACAGGTT+CGG | - | chr6_2:79986802-79986821 | None:intergenic | 45.0% | |
| TTACGAAGATGGGTCCTAAC+AGG | - | chr6_2:79986807-79986826 | None:intergenic | 45.0% | |
| AGGTAATGACCGATCATCTC+AGG | - | chr6_2:79986909-79986928 | None:intergenic | 45.0% | |
| AAGCATGGTAGACCTGGTAT+TGG | + | chr6_2:79986960-79986979 | Msa0930890:CDS | 45.0% | |
| TCACTTGAGAGGAATGAACC+TGG | - | chr6_2:79987000-79987019 | None:intergenic | 45.0% | |
| !! | TAAATAAAAGAAATAAAAAT+GGG | - | chr6_2:79985768-79985787 | None:intergenic | 5.0% |
| !! | ATAAATAAAAGAAATAAAAA+TGG | - | chr6_2:79985769-79985788 | None:intergenic | 5.0% |
| !! | TAAATAAAAGAAATAAAAAT+GGG | - | chr6_2:79985768-79985787 | None:intergenic | 5.0% |
| !! | ATAAATAAAAGAAATAAAAA+TGG | - | chr6_2:79985769-79985788 | None:intergenic | 5.0% |
| AGATGGGTCCTAACAGGTTC+GGG | - | chr6_2:79986801-79986820 | None:intergenic | 50.0% | |
| CCAGGTCTACCATGCTTAAC+AGG | - | chr6_2:79986957-79986976 | None:intergenic | 50.0% | |
| CCTGTTAAGCATGGTAGACC+TGG | + | chr6_2:79986954-79986973 | Msa0930890:CDS | 50.0% | |
| GAGTGAGTAGCACCAATACC+AGG | - | chr6_2:79986975-79986994 | None:intergenic | 50.0% | |
| CTTGAGAGGAATGAACCTGG+AGG | - | chr6_2:79986997-79987016 | None:intergenic | 50.0% | |
| AGATGGGTCCTAACAGGTTC+GGG | - | chr6_2:79986801-79986820 | None:intergenic | 50.0% | |
| CCAGGTCTACCATGCTTAAC+AGG | - | chr6_2:79986957-79986976 | None:intergenic | 50.0% | |
| CCTGTTAAGCATGGTAGACC+TGG | + | chr6_2:79986954-79986973 | Msa0930890:CDS | 50.0% | |
| GAGTGAGTAGCACCAATACC+AGG | - | chr6_2:79986975-79986994 | None:intergenic | 50.0% | |
| CTTGAGAGGAATGAACCTGG+AGG | - | chr6_2:79986997-79987016 | None:intergenic | 50.0% | |
| TCTCTTCTTCGGTACTCCCG+CGG | - | chr6_2:79985571-79985590 | None:intergenic | 55.0% | |
| TCAGTGCTCGTGCTCGTAGA+AGG | + | chr6_2:79985670-79985689 | Msa0930890:CDS | 55.0% | |
| GCTCGTAGAAGGTTCCAGAG+AGG | + | chr6_2:79985681-79985700 | Msa0930890:CDS | 55.0% | |
| GCTTACGAGTGAGACCTCTC+TGG | - | chr6_2:79985698-79985717 | None:intergenic | 55.0% | |
| AGGTCTCACTCGTAAGCCCA+TGG | + | chr6_2:79985701-79985720 | Msa0930890:CDS | 55.0% | |
| !! | TAGAAAAGGGAGGCACCACC+TGG | + | chr6_2:79986768-79986787 | Msa0930890:intron | 55.0% |
| GTGAGAAGCCCGAACCTGTT+AGG | + | chr6_2:79986790-79986809 | Msa0930890:intron | 55.0% | |
| !! | TTGGTGCTACTCACTCCTCC+AGG | + | chr6_2:79986979-79986998 | Msa0930890:CDS | 55.0% |
| TCTCTTCTTCGGTACTCCCG+CGG | - | chr6_2:79985571-79985590 | None:intergenic | 55.0% | |
| TCAGTGCTCGTGCTCGTAGA+AGG | + | chr6_2:79985670-79985689 | Msa0930890:CDS | 55.0% | |
| GCTCGTAGAAGGTTCCAGAG+AGG | + | chr6_2:79985681-79985700 | Msa0930890:CDS | 55.0% | |
| GCTTACGAGTGAGACCTCTC+TGG | - | chr6_2:79985698-79985717 | None:intergenic | 55.0% | |
| AGGTCTCACTCGTAAGCCCA+TGG | + | chr6_2:79985701-79985720 | Msa0930890:CDS | 55.0% | |
| !! | TAGAAAAGGGAGGCACCACC+TGG | + | chr6_2:79986768-79986787 | Msa0930890:intron | 55.0% |
| GTGAGAAGCCCGAACCTGTT+AGG | + | chr6_2:79986790-79986809 | Msa0930890:intron | 55.0% | |
| !! | TTGGTGCTACTCACTCCTCC+AGG | + | chr6_2:79986979-79986998 | Msa0930890:CDS | 55.0% |
| ACAGGTTCGGGCTTCTCACC+AGG | - | chr6_2:79986789-79986808 | None:intergenic | 60.0% | |
| ACAGGTTCGGGCTTCTCACC+AGG | - | chr6_2:79986789-79986808 | None:intergenic | 60.0% | |
| CTTCTTCGGTACTCCCGCGG+CGG | - | chr6_2:79985568-79985587 | None:intergenic | 65.0% | |
| GGTTCGGGCTTCTCACCAGG+TGG | - | chr6_2:79986786-79986805 | None:intergenic | 65.0% | |
| CTTCTTCGGTACTCCCGCGG+CGG | - | chr6_2:79985568-79985587 | None:intergenic | 65.0% | |
| GGTTCGGGCTTCTCACCAGG+TGG | - | chr6_2:79986786-79986805 | None:intergenic | 65.0% | |
| AGATGCAGCAGCCGCCGCCG+CGG | + | chr6_2:79985551-79985570 | Msa0930890:CDS | 75.0% | |
| CTTCGGTACTCCCGCGGCGG+CGG | - | chr6_2:79985565-79985584 | None:intergenic | 75.0% | |
| AGATGCAGCAGCCGCCGCCG+CGG | + | chr6_2:79985551-79985570 | Msa0930890:CDS | 75.0% | |
| CTTCGGTACTCCCGCGGCGG+CGG | - | chr6_2:79985565-79985584 | None:intergenic | 75.0% | |
| ! | GATGCAGCAGCCGCCGCCGC+GGG | + | chr6_2:79985552-79985571 | Msa0930890:CDS | 80.0% |
| ! | GATGCAGCAGCCGCCGCCGC+GGG | + | chr6_2:79985552-79985571 | Msa0930890:CDS | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6_2 | gene | 79985537 | 79987019 | 79985537 | ID=Msa0930890;Name=Msa0930890 |
| chr6_2 | mRNA | 79985537 | 79987019 | 79985537 | ID=Msa0930890-mRNA-1;Parent=Msa0930890;Name=Msa0930890-mRNA-1;_AED=0.04;_eAED=0.04;_QI=0|0|0|1|1|1|2|0|144 |
| chr6_2 | exon | 79985537 | 79985749 | 79985537 | ID=Msa0930890-mRNA-1:exon:13902;Parent=Msa0930890-mRNA-1 |
| chr6_2 | exon | 79986798 | 79987019 | 79986798 | ID=Msa0930890-mRNA-1:exon:13903;Parent=Msa0930890-mRNA-1 |
| chr6_2 | CDS | 79985537 | 79985749 | 79985537 | ID=Msa0930890-mRNA-1:cds;Parent=Msa0930890-mRNA-1 |
| chr6_2 | CDS | 79986798 | 79987019 | 79986798 | ID=Msa0930890-mRNA-1:cds;Parent=Msa0930890-mRNA-1 |
| Gene Sequence |
| Protein sequence |
