Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0277600 | XP_003593950.2 | 99.338 | 151 | 1 | 0 | 1 | 151 | 1 | 151 | 9.63e-104 | 303 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0277600 | sp|O22584|RS14_LUPLU | 95.652 | 138 | 6 | 0 | 3 | 140 | 2 | 139 | 1.57e-92 | 267 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0277600 | G7IPY3 | 99.338 | 151 | 1 | 0 | 1 | 151 | 1 | 151 | 4.60e-104 | 303 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0001760 | Msa0277600 | 0.857281 | 1.816496e-62 | -8.615850e-47 |
| Msa0003330 | Msa0277600 | 0.834962 | 2.212656e-56 | -8.615850e-47 |
| Msa0027590 | Msa0277600 | 0.866198 | 3.397899e-65 | -8.615850e-47 |
| Msa0037480 | Msa0277600 | 0.811196 | 7.900633e-51 | -8.615850e-47 |
| Msa0040220 | Msa0277600 | 0.836460 | 9.240396e-57 | -8.615850e-47 |
| Msa0071760 | Msa0277600 | 0.809425 | 1.904105e-50 | -8.615850e-47 |
| Msa0075350 | Msa0277600 | 0.814341 | 1.618655e-51 | -8.615850e-47 |
| Msa0079560 | Msa0277600 | 0.800162 | 1.640263e-48 | -8.615850e-47 |
| Msa0086160 | Msa0277600 | 0.859436 | 4.142404e-63 | -8.615850e-47 |
| Msa0087910 | Msa0277600 | 0.887760 | 1.075210e-72 | -8.615850e-47 |
| Msa0089540 | Msa0277600 | 0.805365 | 1.382894e-49 | -8.615850e-47 |
| Msa0114600 | Msa0277600 | 0.912880 | 1.172968e-83 | -8.615850e-47 |
| Msa0123290 | Msa0277600 | 0.871179 | 8.322990e-67 | -8.615850e-47 |
| Msa0128330 | Msa0277600 | 0.925237 | 2.406814e-90 | -8.615850e-47 |
| Msa0132460 | Msa0277600 | 0.927094 | 1.896332e-91 | -8.615850e-47 |
| Msa0134580 | Msa0277600 | 0.921419 | 3.667074e-88 | -8.615850e-47 |
| Msa0146610 | Msa0277600 | 0.828998 | 6.580022e-55 | -8.615850e-47 |
| Msa0167860 | Msa0277600 | 0.917836 | 3.267200e-86 | -8.615850e-47 |
| Msa0168320 | Msa0277600 | 0.809177 | 2.152280e-50 | -8.615850e-47 |
| Msa0174580 | Msa0277600 | 0.922082 | 1.559401e-88 | -8.615850e-47 |
| Msa0182050 | Msa0277600 | 0.928315 | 3.432801e-92 | -8.615850e-47 |
| Msa0182100 | Msa0277600 | 0.929878 | 3.686424e-93 | -8.615850e-47 |
| Msa0183840 | Msa0277600 | 0.809117 | 2.217438e-50 | -8.615850e-47 |
| Msa0187810 | Msa0277600 | 0.821685 | 3.540707e-53 | -8.615850e-47 |
| Msa0188740 | Msa0277600 | 0.829414 | 5.216815e-55 | -8.615850e-47 |
| Msa0191450 | Msa0277600 | 0.861870 | 7.568173e-64 | -8.615850e-47 |
| Msa0191550 | Msa0277600 | 0.893183 | 7.967876e-75 | -8.615850e-47 |
| Msa0192300 | Msa0277600 | 0.858971 | 5.709587e-63 | -8.615850e-47 |
| Msa0192490 | Msa0277600 | 0.833477 | 5.214485e-56 | -8.615850e-47 |
| Msa0194940 | Msa0277600 | 0.888751 | 4.471589e-73 | -8.615850e-47 |
| Msa0223240 | Msa0277600 | 0.820265 | 7.513404e-53 | -8.615850e-47 |
| Msa0225350 | Msa0277600 | 0.804272 | 2.339696e-49 | -8.615850e-47 |
| Msa0233550 | Msa0277600 | 0.816627 | 5.016812e-52 | -8.615850e-47 |
| Msa0234850 | Msa0277600 | 0.826522 | 2.589980e-54 | -8.615850e-47 |
| Msa0234900 | Msa0277600 | 0.834536 | 2.831541e-56 | -8.615850e-47 |
| Msa0235050 | Msa0277600 | 0.858819 | 6.341494e-63 | -8.615850e-47 |
| Msa0239420 | Msa0277600 | 0.823995 | 1.025914e-53 | -8.615850e-47 |
| Msa0264640 | Msa0277600 | 0.812958 | 3.262212e-51 | -8.615850e-47 |
| Msa0270160 | Msa0277600 | 0.852902 | 3.403661e-61 | -8.615850e-47 |
| Msa0277600 | Msa0281330 | 0.860540 | 1.923257e-63 | -8.615850e-47 |
| Msa0277600 | Msa0281370 | 0.848077 | 7.713101e-60 | -8.615850e-47 |
| Msa0277600 | Msa0301250 | 0.869124 | 3.917655e-66 | -8.615850e-47 |
| Msa0277600 | Msa0312210 | 0.814112 | 1.818776e-51 | -8.615850e-47 |
| Msa0277600 | Msa0313060 | 0.887838 | 1.003705e-72 | -8.615850e-47 |
| Msa0277600 | Msa0315430 | 0.902401 | 1.006866e-78 | -8.615850e-47 |
| Msa0277600 | Msa0340560 | 0.856699 | 2.695850e-62 | -8.615850e-47 |
| Msa0277600 | Msa0363320 | 0.800780 | 1.227200e-48 | -8.615850e-47 |
| Msa0277600 | Msa0369410 | 0.811982 | 5.331123e-51 | -8.615850e-47 |
| Msa0277600 | Msa0371490 | 0.894927 | 1.554822e-75 | -8.615850e-47 |
| Msa0277600 | Msa0377370 | 0.857792 | 1.281911e-62 | -8.615850e-47 |
| Msa0277600 | Msa0377520 | 0.832072 | 1.164789e-55 | -8.615850e-47 |
| Msa0277600 | Msa0382950 | 0.841825 | 3.757140e-58 | -8.615850e-47 |
| Msa0277600 | Msa0388520 | 0.813026 | 3.152122e-51 | -8.615850e-47 |
| Msa0277600 | Msa0419710 | 0.843844 | 1.091449e-58 | -8.615850e-47 |
| Msa0277600 | Msa0426090 | 0.866254 | 3.260226e-65 | -8.615850e-47 |
| Msa0277600 | Msa0426250 | 0.896659 | 2.983137e-76 | -8.615850e-47 |
| Msa0277600 | Msa0432750 | 0.844703 | 6.416255e-59 | -8.615850e-47 |
| Msa0277600 | Msa0433060 | 0.861288 | 1.139507e-63 | -8.615850e-47 |
| Msa0277600 | Msa0450150 | 0.880192 | 6.722227e-70 | -8.615850e-47 |
| Msa0277600 | Msa0472480 | 0.857858 | 1.225820e-62 | -8.615850e-47 |
| Msa0277600 | Msa0475810 | 0.802847 | 4.619225e-49 | -8.615850e-47 |
| Msa0277600 | Msa0479980 | 0.847662 | 1.003269e-59 | -8.615850e-47 |
| Msa0277600 | Msa0481520 | 0.856897 | 2.358121e-62 | -8.615850e-47 |
| Msa0277600 | Msa0482560 | 0.803535 | 3.328589e-49 | -8.615850e-47 |
| Msa0277600 | Msa0511760 | 0.860775 | 1.633047e-63 | -8.615850e-47 |
| Msa0277600 | Msa0517480 | 0.859553 | 3.819901e-63 | -8.615850e-47 |
| Msa0277600 | Msa0521730 | 0.816769 | 4.661442e-52 | -8.615850e-47 |
| Msa0277600 | Msa0524680 | 0.861270 | 1.154712e-63 | -8.615850e-47 |
| Msa0277600 | Msa0529900 | 0.865406 | 6.045512e-65 | -8.615850e-47 |
| Msa0277600 | Msa0547920 | 0.935627 | 6.299960e-97 | -8.615850e-47 |
| Msa0277600 | Msa0550490 | 0.813702 | 2.238754e-51 | -8.615850e-47 |
| Msa0277600 | Msa0552510 | 0.848871 | 4.648001e-60 | -8.615850e-47 |
| Msa0277600 | Msa0568380 | 0.847973 | 8.236092e-60 | -8.615850e-47 |
| Msa0277600 | Msa0573550 | 0.921603 | 2.895785e-88 | -8.615850e-47 |
| Msa0277600 | Msa0574780 | 0.885867 | 5.614601e-72 | -8.615850e-47 |
| Msa0277600 | Msa0578010 | 0.840325 | 9.308405e-58 | -8.615850e-47 |
| Msa0277600 | Msa0579830 | 0.875122 | 3.950331e-68 | -8.615850e-47 |
| Msa0277600 | Msa0582070 | 0.813758 | 2.176728e-51 | -8.615850e-47 |
| Msa0277600 | Msa0585570 | 0.885263 | 9.449779e-72 | -8.615850e-47 |
| Msa0277600 | Msa0588020 | -0.801835 | 7.466248e-49 | -8.615850e-47 |
| Msa0277600 | Msa0597240 | 0.849263 | 3.617324e-60 | -8.615850e-47 |
| Msa0277600 | Msa0602900 | 0.925392 | 1.951882e-90 | -8.615850e-47 |
| Msa0277600 | Msa0605600 | 0.836984 | 6.792612e-57 | -8.615850e-47 |
| Msa0277600 | Msa0605890 | 0.920843 | 7.650934e-88 | -8.615850e-47 |
| Msa0277600 | Msa0609120 | 0.829272 | 5.648849e-55 | -8.615850e-47 |
| Msa0277600 | Msa0609350 | 0.810772 | 9.763281e-51 | -8.615850e-47 |
| Msa0277600 | Msa0619230 | 0.882688 | 8.446048e-71 | -8.615850e-47 |
| Msa0277600 | Msa0622230 | 0.847982 | 8.190111e-60 | -8.615850e-47 |
| Msa0277600 | Msa0628230 | -0.803045 | 4.204423e-49 | -8.615850e-47 |
| Msa0277600 | Msa0643960 | 0.928423 | 2.951068e-92 | -8.615850e-47 |
| Msa0277600 | Msa0649890 | 0.864907 | 8.672620e-65 | -8.615850e-47 |
| Msa0277600 | Msa0653060 | 0.808098 | 3.659849e-50 | -8.615850e-47 |
| Msa0277600 | Msa0656450 | 0.838938 | 2.135557e-57 | -8.615850e-47 |
| Msa0277600 | Msa0663400 | 0.895164 | 1.242764e-75 | -8.615850e-47 |
| Msa0277600 | Msa0686550 | 0.830428 | 2.953339e-55 | -8.615850e-47 |
| Msa0277600 | Msa0694400 | 0.909055 | 8.693439e-82 | -8.615850e-47 |
| Msa0277600 | Msa0704860 | 0.881228 | 2.856956e-70 | -8.615850e-47 |
| Msa0277600 | Msa0708630 | 0.927375 | 1.283573e-91 | -8.615850e-47 |
| Msa0277600 | Msa0715970 | 0.809749 | 1.622407e-50 | -8.615850e-47 |
| Msa0277600 | Msa0718560 | 0.817369 | 3.418280e-52 | -8.615850e-47 |
| Msa0277600 | Msa0735580 | 0.813095 | 3.043767e-51 | -8.615850e-47 |
| Msa0277600 | Msa0741510 | 0.877043 | 8.621177e-69 | -8.615850e-47 |
| Msa0277600 | Msa0748350 | 0.881357 | 2.568064e-70 | -8.615850e-47 |
| Msa0277600 | Msa0749000 | 0.833027 | 6.748682e-56 | -8.615850e-47 |
| Msa0277600 | Msa0777560 | 0.807512 | 4.874768e-50 | -8.615850e-47 |
| Msa0277600 | Msa0790450 | 0.859268 | 4.650903e-63 | -8.615850e-47 |
| Msa0277600 | Msa0796490 | 0.857210 | 1.905758e-62 | -8.615850e-47 |
| Msa0277600 | Msa0798590 | 0.821730 | 3.456247e-53 | -8.615850e-47 |
| Msa0277600 | Msa0802000 | 0.803983 | 2.686388e-49 | -8.615850e-47 |
| Msa0277600 | Msa0834220 | 0.805404 | 1.357082e-49 | -8.615850e-47 |
| Msa0277600 | Msa0902730 | 0.849547 | 3.015946e-60 | -8.615850e-47 |
| Msa0277600 | Msa0927910 | 0.805362 | 1.384576e-49 | -8.615850e-47 |
| Msa0277600 | Msa0929680 | 0.813514 | 2.462521e-51 | -8.615850e-47 |
| Msa0277600 | Msa0929700 | 0.922173 | 1.386645e-88 | -8.615850e-47 |
| Msa0277600 | Msa0930100 | 0.835889 | 1.290097e-56 | -8.615850e-47 |
| Msa0277600 | Msa0930360 | 0.801162 | 1.025509e-48 | -8.615850e-47 |
| Msa0277600 | Msa0930790 | 0.835271 | 1.849628e-56 | -8.615850e-47 |
| Msa0277600 | Msa0930890 | 0.894314 | 2.770964e-75 | -8.615850e-47 |
| Msa0277600 | Msa1004780 | 0.809099 | 2.236806e-50 | -8.615850e-47 |
| Msa0277600 | Msa1013430 | 0.801775 | 7.678129e-49 | -8.615850e-47 |
| Msa0277600 | Msa1019110 | 0.823812 | 1.132220e-53 | -8.615850e-47 |
| Msa0277600 | Msa1025200 | 0.832612 | 8.558703e-56 | -8.615850e-47 |
| Msa0277600 | Msa1025220 | 0.827960 | 1.171990e-54 | -8.615850e-47 |
| Msa0277600 | Msa1037290 | 0.802280 | 6.045533e-49 | -8.615850e-47 |
| Msa0277600 | Msa1040160 | 0.806722 | 7.163753e-50 | -8.615850e-47 |
| Msa0277600 | Msa1047020 | 0.857579 | 1.482317e-62 | -8.615850e-47 |
| Msa0277600 | Msa1050100 | 0.852726 | 3.820420e-61 | -8.615850e-47 |
| Msa0277600 | Msa1068660 | 0.821658 | 3.590914e-53 | -8.615850e-47 |
| Msa0277600 | Msa1070810 | 0.801139 | 1.036517e-48 | -8.615850e-47 |
| Msa0277600 | Msa1079910 | 0.857374 | 1.704856e-62 | -8.615850e-47 |
| Msa0277600 | Msa1082050 | 0.816898 | 4.362093e-52 | -8.615850e-47 |
| Msa0277600 | Msa1083370 | 0.821156 | 4.690265e-53 | -8.615850e-47 |
| Msa0277600 | Msa1085850 | 0.876263 | 1.604067e-68 | -8.615850e-47 |
| Msa0277600 | Msa1093500 | 0.856108 | 4.019216e-62 | -8.615850e-47 |
| Msa0277600 | Msa1109310 | 0.800813 | 1.208368e-48 | -8.615850e-47 |
| Msa0277600 | Msa1116940 | 0.815111 | 1.093020e-51 | -8.615850e-47 |
| Msa0277600 | Msa1124850 | 0.825622 | 4.240090e-54 | -8.615850e-47 |
| Msa0277600 | Msa1126690 | 0.887616 | 1.220085e-72 | -8.615850e-47 |
| Msa0277600 | Msa1130680 | 0.804861 | 1.762822e-49 | -8.615850e-47 |
| Msa0277600 | Msa1144610 | 0.825386 | 4.821276e-54 | -8.615850e-47 |
| Msa0277600 | Msa1156830 | 0.812249 | 4.662222e-51 | -8.615850e-47 |
| Msa0277600 | Msa1158630 | 0.802481 | 5.497757e-49 | -8.615850e-47 |
| Msa0277600 | Msa1164150 | 0.840466 | 8.550592e-58 | -8.615850e-47 |
| Msa0277600 | Msa1165640 | 0.847427 | 1.164580e-59 | -8.615850e-47 |
| Msa0277600 | Msa1166670 | 0.815325 | 9.797463e-52 | -8.615850e-47 |
| Msa0277600 | Msa1180000 | 0.837625 | 4.655941e-57 | -8.615850e-47 |
| Msa0277600 | Msa1186030 | 0.825531 | 4.455172e-54 | -8.615850e-47 |
| Msa0277600 | Msa1208330 | 0.813121 | 3.005284e-51 | -8.615850e-47 |
| Msa0277600 | Msa1219760 | 0.832836 | 7.530212e-56 | -8.615850e-47 |
| Msa0277600 | Msa1235950 | 0.881787 | 1.794651e-70 | -8.615850e-47 |
| Msa0277600 | Msa1235980 | 0.887311 | 1.594694e-72 | -8.615850e-47 |
| Msa0277600 | Msa1237040 | 0.852798 | 3.643881e-61 | -8.615850e-47 |
| Msa0277600 | Msa1240270 | 0.816743 | 4.725547e-52 | -8.615850e-47 |
| Msa0277600 | Msa1245270 | 0.807180 | 5.733800e-50 | -8.615850e-47 |
| Msa0277600 | Msa1255830 | 0.847503 | 1.109667e-59 | -8.615850e-47 |
| Msa0277600 | Msa1255850 | 0.858189 | 9.773250e-63 | -8.615850e-47 |
| Msa0277600 | Msa1258540 | 0.825176 | 5.406443e-54 | -8.615850e-47 |
| Msa0277600 | Msa1269250 | -0.830626 | 2.641993e-55 | -8.615850e-47 |
| Msa0277600 | Msa1270640 | 0.826180 | 3.125227e-54 | -8.615850e-47 |
| Msa0277600 | Msa1270710 | 0.826444 | 2.703391e-54 | -8.615850e-47 |
| Msa0277600 | Msa1278130 | 0.803336 | 3.660152e-49 | -8.615850e-47 |
| Msa0277600 | Msa1284060 | 0.832664 | 8.310891e-56 | -8.615850e-47 |
| Msa0277600 | Msa1284800 | 0.800290 | 1.544455e-48 | -8.615850e-47 |
| Msa0277600 | Msa1295150 | 0.807749 | 4.341839e-50 | -8.615850e-47 |
| Msa0277600 | Msa1296090 | 0.855774 | 5.033577e-62 | -8.615850e-47 |
| Msa0277600 | Msa1316100 | 0.843339 | 1.489405e-58 | -8.615850e-47 |
| Msa0277600 | Msa1317390 | 0.857311 | 1.779519e-62 | -8.615850e-47 |
| Msa0277600 | Msa1330730 | 0.848849 | 4.715833e-60 | -8.615850e-47 |
| Msa0277600 | Msa1333370 | 0.832701 | 8.133372e-56 | -8.615850e-47 |
| Msa0277600 | Msa1341780 | 0.888597 | 5.125843e-73 | -8.615850e-47 |
| Msa0277600 | Msa1351020 | 0.929918 | 3.484275e-93 | -8.615850e-47 |
| Msa0277600 | Msa1351910 | 0.873814 | 1.098501e-67 | -8.615850e-47 |
| Msa0277600 | Msa1353300 | 0.866173 | 3.460918e-65 | -8.615850e-47 |
| Msa0277600 | Msa1358710 | 0.807667 | 4.519244e-50 | -8.615850e-47 |
| Msa0277600 | Msa1363910 | 0.826578 | 2.512361e-54 | -8.615850e-47 |
| Msa0277600 | Msa1367540 | 0.874423 | 6.831438e-68 | -8.615850e-47 |
| Msa0277600 | Msa1368920 | 0.804618 | 1.981360e-49 | -8.615850e-47 |
| Msa0277600 | Msa1371410 | 0.859389 | 4.278071e-63 | -8.615850e-47 |
| Msa0277600 | Msa1385480 | 0.915654 | 4.551611e-85 | -8.615850e-47 |
| Msa0277600 | Msa1390760 | 0.882078 | 1.407735e-70 | -8.615850e-47 |
| Msa0277600 | Msa1403520 | 0.808338 | 3.252401e-50 | -8.615850e-47 |
| Msa0277600 | Msa1407550 | 0.879085 | 1.661979e-69 | -8.615850e-47 |
| Msa0277600 | Msa1413570 | 0.847235 | 1.314382e-59 | -8.615850e-47 |
| Msa0277600 | Msa1415620 | 0.849965 | 2.304679e-60 | -8.615850e-47 |
| Msa0277600 | Msa1421510 | 0.844404 | 7.720941e-59 | -8.615850e-47 |
| Msa0277600 | Msa1424570 | 0.892287 | 1.823430e-74 | -8.615850e-47 |
| Msa0277600 | Msa1425070 | 0.808385 | 3.178820e-50 | -8.615850e-47 |
| Msa0277600 | Msa1432310 | 0.887932 | 9.234689e-73 | -8.615850e-47 |
| Msa0277600 | Msa1441220 | -0.807920 | 3.992613e-50 | -8.615850e-47 |
| Msa0277600 | Msa1444680 | 0.801806 | 7.569203e-49 | -8.615850e-47 |
| Msa0277600 | Msa1446410 | 0.869914 | 2.165248e-66 | -8.615850e-47 |
| Msa0277600 | Msa1446510 | 0.801006 | 1.103751e-48 | -8.615850e-47 |
| Msa0277600 | Msa1449160 | 0.817563 | 3.091136e-52 | -8.615850e-47 |
| Msa0277600 | Msa1450560 | 0.862771 | 4.002515e-64 | -8.615850e-47 |
| Msa0277600 | Msa1462580 | 0.819739 | 9.913676e-53 | -8.615850e-47 |
| Msa0277600 | Msa1463570 | 0.921668 | 2.661827e-88 | -8.615850e-47 |
| Msa0277600 | Msa1465700 | 0.869732 | 2.483798e-66 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0277600 | MtrunA17_Chr2g0286111 | 99.338 | 151 | 1 | 0 | 1 | 151 | 1 | 151 | 8.86e-108 | 303 |
| Msa0277600 | MtrunA17_Chr4g0052211 | 99.338 | 151 | 1 | 0 | 1 | 151 | 1 | 151 | 4.50e-107 | 301 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0277600 | AT3G11510.1 | 89.855 | 138 | 14 | 0 | 3 | 140 | 2 | 139 | 9.24e-90 | 258 |
| Msa0277600 | AT3G52580.1 | 89.130 | 138 | 15 | 0 | 3 | 140 | 2 | 139 | 2.86e-89 | 256 |
| Msa0277600 | AT2G36160.1 | 88.406 | 138 | 16 | 0 | 3 | 140 | 2 | 139 | 1.71e-88 | 254 |
| Msa0277600 | ATCG00750.1 | 33.613 | 119 | 70 | 2 | 29 | 147 | 28 | 137 | 7.66e-12 | 59.7 |
Find 71 sgRNAs with CRISPR-Local
Find 181 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTCCGAGATTTGAAGAAATT+AGG | 0.223530 | 2_3:-10231195 | None:intergenic |
| CTTCGTGCCCTTGCTCGTTC+TGG | 0.240493 | 2_3:+10232735 | Msa0277600:CDS |
| AGCACCAGGGCCAGGTGTTT+TGG | 0.248968 | 2_3:-10232703 | None:intergenic |
| ATTTGAAGAAATTAGGGTTT+TGG | 0.284679 | 2_3:-10231188 | None:intergenic |
| GCTCGTTCTGGAATGAAAAT+TGG | 0.299156 | 2_3:+10232747 | Msa0277600:CDS |
| ACAAGAAATACTTTATGTTT+AGG | 0.301414 | 2_3:-10233897 | None:intergenic |
| TGTGTTCAGCTTCGAGCTTT+TGG | 0.319129 | 2_3:+10234030 | Msa0277600:three_prime_UTR |
| AATGTTACTGTCTCTTCCTT+TGG | 0.327634 | 2_3:-10231350 | None:intergenic |
| CAAAATGCCACAATTCTGTT+TGG | 0.341435 | 2_3:-10233842 | None:intergenic |
| TCCGAGATTTGAAGAAATTA+GGG | 0.346871 | 2_3:-10231194 | None:intergenic |
| CCCTTCTACCACTCTTTCTA+CGG | 0.354483 | 2_3:-10233757 | None:intergenic |
| AGAAGGCTTTAGATACCTTA+TGG | 0.383435 | 2_3:+10233782 | Msa0277600:exon |
| AGAGTGGTAGAAGGGGTAGA+AGG | 0.383998 | 2_3:+10233765 | Msa0277600:CDS |
| AACATTGGGTCCAGCTGTTA+AGG | 0.388167 | 2_3:+10231367 | Msa0277600:CDS |
| AGTAAACAATAAAGCTAATT+CGG | 0.392151 | 2_3:-10233970 | None:intergenic |
| CGAAGAGCAGCTTGAGCACC+AGG | 0.399712 | 2_3:-10232717 | None:intergenic |
| AGTCGTCAAAGAGAAAGGTT+AGG | 0.404664 | 2_3:+10231324 | Msa0277600:intron |
| TTGGATACTGATGCTGCTGC+TGG | 0.405674 | 2_3:-10231169 | None:intergenic |
| TTTAGATACCTTATGGTGTA+TGG | 0.408955 | 2_3:+10233789 | Msa0277600:exon |
| TGCCGCTATGCTTGCAGCAC+AGG | 0.424923 | 2_3:+10232371 | Msa0277600:CDS |
| TGAACACAAATCTAATAATC+TGG | 0.425040 | 2_3:-10234015 | None:intergenic |
| TTTAGGTGGGATGAAAGTTA+AGG | 0.429174 | 2_3:+10232323 | Msa0277600:intron |
| GGAATGAAAATTGGTCGTAT+AGG | 0.435498 | 2_3:+10232756 | Msa0277600:CDS |
| GCAGCTTGAGCACCAGGGCC+AGG | 0.435589 | 2_3:-10232711 | None:intergenic |
| CAGCATGTTACTGATTTATC+CGG | 0.442376 | 2_3:+10231541 | Msa0277600:intron |
| ACCCTAATTTCTTCAAATCT+CGG | 0.444756 | 2_3:+10231193 | Msa0277600:five_prime_UTR |
| TGCTGCAAGCATAGCGGCAT+AGG | 0.460137 | 2_3:-10232367 | None:intergenic |
| GTGATAGTCGTCAAAGAGAA+AGG | 0.460831 | 2_3:+10231319 | Msa0277600:intron |
| CACATTAAGCTCCGTGCCAC+TGG | 0.465038 | 2_3:+10232669 | Msa0277600:CDS |
| GAACCTTGTCAAAAGAGAAA+TGG | 0.470046 | 2_3:-10231147 | None:intergenic |
| CCCGTAGAAAGAGTGGTAGA+AGG | 0.472164 | 2_3:+10233756 | Msa0277600:CDS |
| GAAACCCTTGTCCGTATCAC+TGG | 0.485388 | 2_3:+10231568 | Msa0277600:CDS |
| ACCTTATGGTGTATGGAAGC+TGG | 0.488683 | 2_3:+10233796 | Msa0277600:three_prime_UTR |
| TTTGGTCTTGTTTCCACCAG+TGG | 0.501009 | 2_3:-10232685 | None:intergenic |
| TCCAGCTTCCATACACCATA+AGG | 0.503287 | 2_3:-10233797 | None:intergenic |
| ACGGGTGCTATCGGAAGGAA+TGG | 0.504362 | 2_3:-10233738 | None:intergenic |
| TGCCACAATTCTGTTTGGCA+TGG | 0.511987 | 2_3:-10233837 | None:intergenic |
| ACGGACAAGGGTTTCCCTGC+CGG | 0.518910 | 2_3:-10231560 | None:intergenic |
| TGTTCACCATCCTTAACAGC+TGG | 0.531081 | 2_3:-10231377 | None:intergenic |
| ACTCTTTCTACGGGTGCTAT+CGG | 0.532615 | 2_3:-10233747 | None:intergenic |
| CCGTAGAAAGAGTGGTAGAA+GGG | 0.533450 | 2_3:+10233757 | Msa0277600:CDS |
| AAAGGAAGAGACAGTAACAT+TGG | 0.536923 | 2_3:+10231352 | Msa0277600:CDS |
| CCTTCTACCACTCTTTCTAC+GGG | 0.539502 | 2_3:-10233756 | None:intergenic |
| CATATATATACTAACAATGA+AGG | 0.543037 | 2_3:-10231441 | None:intergenic |
| ATGTTACTGATTTATCCGGC+AGG | 0.543996 | 2_3:+10231545 | Msa0277600:CDS |
| GTCGTCAAAGAGAAAGGTTA+GGG | 0.549356 | 2_3:+10231325 | Msa0277600:intron |
| AAGACCAAAACACCTGGCCC+TGG | 0.552706 | 2_3:+10232699 | Msa0277600:CDS |
| AAGGAAGAGACAGTAACATT+GGG | 0.554128 | 2_3:+10231353 | Msa0277600:CDS |
| TCTTGTTTCCACCAGTGGCA+CGG | 0.555351 | 2_3:-10232680 | None:intergenic |
| GAGAAAGGTTAGGGAGCCAA+AGG | 0.560093 | 2_3:+10231334 | Msa0277600:CDS |
| ACTCATACATACCAGTGATA+CGG | 0.570439 | 2_3:-10231579 | None:intergenic |
| ATTAAGCTCCGTGCCACTGG+TGG | 0.571382 | 2_3:+10232672 | Msa0277600:CDS |
| GCTGCAAGCATAGCGGCATA+GGG | 0.578463 | 2_3:-10232366 | None:intergenic |
| TTTCATTCCAGAACGAGCAA+GGG | 0.582609 | 2_3:-10232742 | None:intergenic |
| TTCCATGCCAAACAGAATTG+TGG | 0.582827 | 2_3:+10233835 | Msa0277600:three_prime_UTR |
| CGGGTGCTATCGGAAGGAAT+GGG | 0.585535 | 2_3:-10233737 | None:intergenic |
| GGAAACAAGACCAAAACACC+TGG | 0.596535 | 2_3:+10232693 | Msa0277600:CDS |
| TTTCTACGGGTGCTATCGGA+AGG | 0.607952 | 2_3:-10233743 | None:intergenic |
| ACATACCAGTGATACGGACA+AGG | 0.611084 | 2_3:-10231573 | None:intergenic |
| AGATACCATGGTTGAAAATG+CGG | 0.612440 | 2_3:-10231218 | None:intergenic |
| CCTTGTCAAAAGAGAAATGG+TGG | 0.615510 | 2_3:-10231144 | None:intergenic |
| TGTTACTGATTTATCCGGCA+GGG | 0.618792 | 2_3:+10231546 | Msa0277600:CDS |
| TTGGGTCCAGCTGTTAAGGA+TGG | 0.623308 | 2_3:+10231371 | Msa0277600:CDS |
| CGTAGAAAGAGTGGTAGAAG+GGG | 0.630512 | 2_3:+10233758 | Msa0277600:CDS |
| GATAGCACCCGTAGAAAGAG+TGG | 0.631829 | 2_3:+10233749 | Msa0277600:CDS |
| GGATGTTGCTACTAGATGCA+AGG | 0.645225 | 2_3:+10232392 | Msa0277600:CDS |
| TTTAGGTGTTGAATCAAACA+TGG | 0.646359 | 2_3:-10233880 | None:intergenic |
| CATACCAGTGATACGGACAA+GGG | 0.691082 | 2_3:-10231572 | None:intergenic |
| ACGGAGCTTAATGTGAAGTG+CGG | 0.698863 | 2_3:-10232661 | None:intergenic |
| ATCCTGTGCTGCAAGCATAG+CGG | 0.706099 | 2_3:-10232373 | None:intergenic |
| GAAGAGCAGCTTGAGCACCA+GGG | 0.706692 | 2_3:-10232716 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | GTTAAAAAATTACATATTTA+AGG | + | chr2_3:10231679-10231698 | Msa0277600:intron | 10.0% |
| !!! | TTATAAGTTTTTAATTTAGA+TGG | + | chr2_3:10232180-10232199 | Msa0277600:intron | 10.0% |
| !!! | TAGCATTATTTTTTTTTATA+TGG | + | chr2_3:10232580-10232599 | Msa0277600:intron | 10.0% |
| !!! | AGCATTATTTTTTTTTATAT+GGG | + | chr2_3:10232581-10232600 | Msa0277600:intron | 10.0% |
| !!! | TTAGTTACTATCATATTTTA+AGG | + | chr2_3:10231647-10231666 | Msa0277600:intron | 15.0% |
| !! | TTTGAAAAACCTTAAAAATT+TGG | + | chr2_3:10231711-10231730 | Msa0277600:intron | 15.0% |
| !!! | TACAAATAACCAAATTTTTA+AGG | - | chr2_3:10231723-10231742 | None:intergenic | 15.0% |
| !! | ATTTGATAAGTTAATTTAGA+TGG | + | chr2_3:10232124-10232143 | Msa0277600:intron | 15.0% |
| !!! | TTGTATTTTTTCCAAATTTT+AGG | + | chr2_3:10232306-10232325 | Msa0277600:intron | 15.0% |
| !!! | GCATTATTTTTTTTTATATG+GGG | + | chr2_3:10232582-10232601 | Msa0277600:intron | 15.0% |
| !! | CATATATATACTAACAATGA+AGG | - | chr2_3:10231444-10231463 | None:intergenic | 20.0% |
| !!! | GAATTTTTTTTAAAATACCC+TGG | - | chr2_3:10231895-10231914 | None:intergenic | 20.0% |
| !! | ATTGAAAAATAATTATTCCC+GGG | - | chr2_3:10232041-10232060 | None:intergenic | 20.0% |
| !! | GATTGAAAAATAATTATTCC+CGG | - | chr2_3:10232042-10232061 | None:intergenic | 20.0% |
| !! | TTTCAATCTTGTAACAAATA+TGG | + | chr2_3:10232054-10232073 | Msa0277600:intron | 20.0% |
| !! | TTCAATCTTGTAACAAATAT+GGG | + | chr2_3:10232055-10232074 | Msa0277600:intron | 20.0% |
| !!! | TATTTTTTCCAAATTTTAGG+TGG | + | chr2_3:10232309-10232328 | Msa0277600:intron | 20.0% |
| !!! | ATTTTTTCCAAATTTTAGGT+GGG | + | chr2_3:10232310-10232329 | Msa0277600:intron | 20.0% |
| !!! | TGAATGTTTTTGTTTTGTTT+TGG | + | chr2_3:10232542-10232561 | Msa0277600:intron | 20.0% |
| !!! | TGTACTGATTCAAAATATTT+TGG | + | chr2_3:10232620-10232639 | Msa0277600:intron | 20.0% |
| !! | GATAATTGTATTTAATCTGA+TGG | - | chr2_3:10232914-10232933 | None:intergenic | 20.0% |
| !!! | TTCAAGTTATTTGAGTTATT+TGG | + | chr2_3:10232987-10233006 | Msa0277600:intron | 20.0% |
| !! | TATTGTATAGAATAACTGTA+AGG | + | chr2_3:10233042-10233061 | Msa0277600:intron | 20.0% |
| !! | AATATTCACTATAGTACATA+TGG | + | chr2_3:10233125-10233144 | Msa0277600:intron | 20.0% |
| !!! | TGCTCTTATTTTAAGTTATT+TGG | + | chr2_3:10233156-10233175 | Msa0277600:intron | 20.0% |
| !! | ACAAGAAATACTTTATGTTT+AGG | - | chr2_3:10233900-10233919 | None:intergenic | 20.0% |
| !! | AGTAAACAATAAAGCTAATT+CGG | - | chr2_3:10233973-10233992 | None:intergenic | 20.0% |
| !! | ATTTGAAGAAATTAGGGTTT+TGG | - | chr2_3:10231191-10231210 | None:intergenic | 25.0% |
| ! | TAACTCTCTATAATTGTTCT+TGG | - | chr2_3:10231751-10231770 | None:intergenic | 25.0% |
| !! | TGTTAGGATTTTTATCTTAG+TGG | + | chr2_3:10231799-10231818 | Msa0277600:intron | 25.0% |
| !! | AAATAAATTCCAGTTTTCCT+AGG | - | chr2_3:10231939-10231958 | None:intergenic | 25.0% |
| ! | ACAAAATTTAATGGGAATGT+TGG | + | chr2_3:10231976-10231995 | Msa0277600:intron | 25.0% |
| ! | CAAAATTTAATGGGAATGTT+GGG | + | chr2_3:10231977-10231996 | Msa0277600:intron | 25.0% |
| !!! | CATGTTTTAATTACTAGATG+TGG | + | chr2_3:10232265-10232284 | Msa0277600:intron | 25.0% |
| ! | ATATTTACGATGTGAAAGTT+AGG | + | chr2_3:10232850-10232869 | Msa0277600:intron | 25.0% |
| ! | GCGTATTGTATAGAATTATT+TGG | + | chr2_3:10233013-10233032 | Msa0277600:intron | 25.0% |
| ! | TTTCTCTTAACTATAACTAC+TGG | - | chr2_3:10233095-10233114 | None:intergenic | 25.0% |
| ! | AGTTATAGTTAAGAGAAACA+TGG | + | chr2_3:10233097-10233116 | Msa0277600:intron | 25.0% |
| ! | TAATAGGTAAAAGAGAATCA+GGG | + | chr2_3:10233253-10233272 | Msa0277600:intron | 25.0% |
| ! | AATTGAAAAAATTCCTAGTC+TGG | - | chr2_3:10233560-10233579 | None:intergenic | 25.0% |
| ! | GAATAATTAATTTCACTGAG+AGG | - | chr2_3:10233628-10233647 | None:intergenic | 25.0% |
| ! | TGAACACAAATCTAATAATC+TGG | - | chr2_3:10234018-10234037 | None:intergenic | 25.0% |
| ACCCTAATTTCTTCAAATCT+CGG | + | chr2_3:10231193-10231212 | Msa0277600:five_prime_UTR | 30.0% | |
| TCCGAGATTTGAAGAAATTA+GGG | - | chr2_3:10231197-10231216 | None:intergenic | 30.0% | |
| TTCCGAGATTTGAAGAAATT+AGG | - | chr2_3:10231198-10231217 | None:intergenic | 30.0% | |
| AGCATGATTATTCTATACTC+TGG | + | chr2_3:10231772-10231791 | Msa0277600:intron | 30.0% | |
| ! | AACTGACTCAAATTATTCCT+AGG | + | chr2_3:10231831-10231850 | Msa0277600:intron | 30.0% |
| TTGAATATTCCTAGGAAAAC+TGG | + | chr2_3:10231927-10231946 | Msa0277600:intron | 30.0% | |
| ATAATTATTCCCGGGTATAA+AGG | - | chr2_3:10232033-10232052 | None:intergenic | 30.0% | |
| ! | GTTTTTGTCAAAACACTCTT+AGG | - | chr2_3:10232092-10232111 | None:intergenic | 30.0% |
| ! | ATGTTGCTGTTGATATTGTT+TGG | + | chr2_3:10232232-10232251 | Msa0277600:intron | 30.0% |
| ! | TCAAACCAAAATGCGTTTTT+GGG | + | chr2_3:10232467-10232486 | Msa0277600:intron | 30.0% |
| ACTGTGTTTACACTGTTAAA+TGG | + | chr2_3:10232500-10232519 | Msa0277600:intron | 30.0% | |
| !!! | GATTCAAAATATTTTGGAGC+AGG | + | chr2_3:10232626-10232645 | Msa0277600:intron | 30.0% |
| AACCTTAAACTATCTTCTGT+GGG | - | chr2_3:10232817-10232836 | None:intergenic | 30.0% | |
| AAACCTTAAACTATCTTCTG+TGG | - | chr2_3:10232818-10232837 | None:intergenic | 30.0% | |
| TAAGTATATTCTCTCTCTTC+TGG | - | chr2_3:10232966-10232985 | None:intergenic | 30.0% | |
| ATCTGTACTGTATTGAACAA+CGG | + | chr2_3:10233180-10233199 | Msa0277600:intron | 30.0% | |
| GTAATAGGTAAAAGAGAATC+AGG | + | chr2_3:10233252-10233271 | Msa0277600:intron | 30.0% | |
| !! | TTTTTATGTTGCTATTGCAG+AGG | + | chr2_3:10233706-10233725 | Msa0277600:intron | 30.0% |
| TTTAGATACCTTATGGTGTA+TGG | + | chr2_3:10233789-10233808 | Msa0277600:exon | 30.0% | |
| !! | TTTAGGTGTTGAATCAAACA+TGG | - | chr2_3:10233883-10233902 | None:intergenic | 30.0% |
| GAACCTTGTCAAAAGAGAAA+TGG | - | chr2_3:10231150-10231169 | None:intergenic | 35.0% | |
| AGATACCATGGTTGAAAATG+CGG | - | chr2_3:10231221-10231240 | None:intergenic | 35.0% | |
| ATGTACGTATGAAGATACCA+TGG | - | chr2_3:10231233-10231252 | None:intergenic | 35.0% | |
| AATGTTACTGTCTCTTCCTT+TGG | - | chr2_3:10231353-10231372 | None:intergenic | 35.0% | |
| AAAGGAAGAGACAGTAACAT+TGG | + | chr2_3:10231352-10231371 | Msa0277600:CDS | 35.0% | |
| AAGGAAGAGACAGTAACATT+GGG | + | chr2_3:10231353-10231372 | Msa0277600:CDS | 35.0% | |
| ! | AAGGATGGTGAACATGTTTT+CGG | + | chr2_3:10231386-10231405 | Msa0277600:CDS | 35.0% |
| !! | CAGCATGTTACTGATTTATC+CGG | + | chr2_3:10231541-10231560 | Msa0277600:intron | 35.0% |
| ACTCATACATACCAGTGATA+CGG | - | chr2_3:10231582-10231601 | None:intergenic | 35.0% | |
| ! | TCTATACTCTGGTTTGTGTT+AGG | + | chr2_3:10231783-10231802 | Msa0277600:intron | 35.0% |
| TTCTAGTGTATGTTGTTCCT+AGG | - | chr2_3:10231851-10231870 | None:intergenic | 35.0% | |
| AAAGACAGTAGTTTGAATCC+AGG | + | chr2_3:10231874-10231893 | Msa0277600:intron | 35.0% | |
| AAGACAGTAGTTTGAATCCA+GGG | + | chr2_3:10231875-10231894 | Msa0277600:intron | 35.0% | |
| TTCACAAGAACCTTTATACC+CGG | + | chr2_3:10232020-10232039 | Msa0277600:intron | 35.0% | |
| CAGCAACATGAATGTATCTT+AGG | - | chr2_3:10232221-10232240 | None:intergenic | 35.0% | |
| GCTGTTGATATTGTTTGGTT+TGG | + | chr2_3:10232237-10232256 | Msa0277600:intron | 35.0% | |
| CTTTCATCCCACCTAAAATT+TGG | - | chr2_3:10232320-10232339 | None:intergenic | 35.0% | |
| TTTAGGTGGGATGAAAGTTA+AGG | + | chr2_3:10232323-10232342 | Msa0277600:intron | 35.0% | |
| ! | GTCAAACCAAAATGCGTTTT+TGG | + | chr2_3:10232466-10232485 | Msa0277600:intron | 35.0% |
| ! | TTTCACCCAAAAACGCATTT+TGG | - | chr2_3:10232475-10232494 | None:intergenic | 35.0% |
| TTCAAACTGAAGCTCAGAAA+CGG | - | chr2_3:10232526-10232545 | None:intergenic | 35.0% | |
| GGAATGAAAATTGGTCGTAT+AGG | + | chr2_3:10232756-10232775 | Msa0277600:CDS | 35.0% | |
| AACCCACAGAAGATAGTTTA+AGG | + | chr2_3:10232812-10232831 | Msa0277600:intron | 35.0% | |
| TCTCTCTTCTGGTAAAATAG+AGG | - | chr2_3:10232955-10232974 | None:intergenic | 35.0% | |
| ! | TCAACGGTGAACCTTATTTA+CGG | - | chr2_3:10233214-10233233 | None:intergenic | 35.0% |
| TATCGTACTCAGTTCATCAA+CGG | - | chr2_3:10233230-10233249 | None:intergenic | 35.0% | |
| TTGATGAACTGAGTACGATA+TGG | + | chr2_3:10233230-10233249 | Msa0277600:intron | 35.0% | |
| ACTGAGTACGATATGGTAAT+AGG | + | chr2_3:10233237-10233256 | Msa0277600:intron | 35.0% | |
| AAAGAGAATCAGGGATATCT+AGG | + | chr2_3:10233262-10233281 | Msa0277600:intron | 35.0% | |
| CTAGGAAAATATGTTGCACA+AGG | + | chr2_3:10233280-10233299 | Msa0277600:intron | 35.0% | |
| CCAGAAAATCCAAATGTCTT+GGG | - | chr2_3:10233369-10233388 | None:intergenic | 35.0% | |
| ACCAGAAAATCCAAATGTCT+TGG | - | chr2_3:10233370-10233389 | None:intergenic | 35.0% | |
| ! | AAGACATTTGGATTTTCTGG+TGG | + | chr2_3:10233369-10233388 | Msa0277600:intron | 35.0% |
| !! | TTTCGTGGATTAGACTGAAA+CGG | - | chr2_3:10233523-10233542 | None:intergenic | 35.0% |
| TTTCAGTCTAATCCACGAAA+GGG | + | chr2_3:10233523-10233542 | Msa0277600:intron | 35.0% | |
| ATTTCACTGAGAGGAAGATA+AGG | - | chr2_3:10233619-10233638 | None:intergenic | 35.0% | |
| !! | AGAAGGCTTTAGATACCTTA+TGG | + | chr2_3:10233782-10233801 | Msa0277600:exon | 35.0% |
| CAAAATGCCACAATTCTGTT+TGG | - | chr2_3:10233845-10233864 | None:intergenic | 35.0% | |
| CCTTGTCAAAAGAGAAATGG+TGG | - | chr2_3:10231147-10231166 | None:intergenic | 40.0% | |
| ! | CCACCATTTCTCTTTTGACA+AGG | + | chr2_3:10231144-10231163 | Msa0277600:five_prime_UTR | 40.0% |
| GTGATAGTCGTCAAAGAGAA+AGG | + | chr2_3:10231319-10231338 | Msa0277600:intron | 40.0% | |
| AGTCGTCAAAGAGAAAGGTT+AGG | + | chr2_3:10231324-10231343 | Msa0277600:intron | 40.0% | |
| GTCGTCAAAGAGAAAGGTTA+GGG | + | chr2_3:10231325-10231344 | Msa0277600:intron | 40.0% | |
| !! | ATGTTACTGATTTATCCGGC+AGG | + | chr2_3:10231545-10231564 | Msa0277600:CDS | 40.0% |
| !! | TGTTACTGATTTATCCGGCA+GGG | + | chr2_3:10231546-10231565 | Msa0277600:CDS | 40.0% |
| CCTAGGAATATTCAAGAGTG+TGG | - | chr2_3:10231922-10231941 | None:intergenic | 40.0% | |
| CCACACTCTTGAATATTCCT+AGG | + | chr2_3:10231919-10231938 | Msa0277600:intron | 40.0% | |
| TCACAAGAACCTTTATACCC+GGG | + | chr2_3:10232021-10232040 | Msa0277600:intron | 40.0% | |
| !!! | AATATTTTGGAGCAGGAGCT+CGG | + | chr2_3:10232633-10232652 | Msa0277600:intron | 40.0% |
| TTTCATTCCAGAACGAGCAA+GGG | - | chr2_3:10232745-10232764 | None:intergenic | 40.0% | |
| ! | TTTTCATTCCAGAACGAGCA+AGG | - | chr2_3:10232746-10232765 | None:intergenic | 40.0% |
| !! | GCTCGTTCTGGAATGAAAAT+TGG | + | chr2_3:10232747-10232766 | Msa0277600:CDS | 40.0% |
| CATCGTAAATATCAGAGAGC+AGG | - | chr2_3:10232842-10232861 | None:intergenic | 40.0% | |
| GGATAGACACTTCATCTCTA+TGG | - | chr2_3:10233341-10233360 | None:intergenic | 40.0% | |
| ATCCTTAGTCCCAAGACATT+TGG | + | chr2_3:10233357-10233376 | Msa0277600:intron | 40.0% | |
| ATCCAAATGTCTTGGGACTA+AGG | - | chr2_3:10233362-10233381 | None:intergenic | 40.0% | |
| ! | CCCAAGACATTTGGATTTTC+TGG | + | chr2_3:10233366-10233385 | Msa0277600:intron | 40.0% |
| !! | ACATTTGGATTTTCTGGTGG+TGG | + | chr2_3:10233372-10233391 | Msa0277600:intron | 40.0% |
| ! | TCTACCACGTGAGTTCTTTT+TGG | - | chr2_3:10233437-10233456 | None:intergenic | 40.0% |
| ATTTAGCAAGCAAACAGGGA+AGG | - | chr2_3:10233490-10233509 | None:intergenic | 40.0% | |
| CAGGATTTAGCAAGCAAACA+GGG | - | chr2_3:10233494-10233513 | None:intergenic | 40.0% | |
| ACAGGATTTAGCAAGCAAAC+AGG | - | chr2_3:10233495-10233514 | None:intergenic | 40.0% | |
| TAGACTGAAACGGTGATTAC+AGG | - | chr2_3:10233513-10233532 | None:intergenic | 40.0% | |
| GTTTCAGTCTAATCCACGAA+AGG | + | chr2_3:10233522-10233541 | Msa0277600:intron | 40.0% | |
| TTCCATGCCAAACAGAATTG+TGG | + | chr2_3:10233835-10233854 | Msa0277600:three_prime_UTR | 40.0% | |
| AACATTGGGTCCAGCTGTTA+AGG | + | chr2_3:10231367-10231386 | Msa0277600:CDS | 45.0% | |
| TGTTCACCATCCTTAACAGC+TGG | - | chr2_3:10231380-10231399 | None:intergenic | 45.0% | |
| CATACCAGTGATACGGACAA+GGG | - | chr2_3:10231575-10231594 | None:intergenic | 45.0% | |
| ACATACCAGTGATACGGACA+AGG | - | chr2_3:10231576-10231595 | None:intergenic | 45.0% | |
| GGATGTTGCTACTAGATGCA+AGG | + | chr2_3:10232392-10232411 | Msa0277600:CDS | 45.0% | |
| GTTGCTACTAGATGCAAGGT+CGG | + | chr2_3:10232396-10232415 | Msa0277600:intron | 45.0% | |
| ACGGAGCTTAATGTGAAGTG+CGG | - | chr2_3:10232664-10232683 | None:intergenic | 45.0% | |
| !! | TTTGGTCTTGTTTCCACCAG+TGG | - | chr2_3:10232688-10232707 | None:intergenic | 45.0% |
| GGAAACAAGACCAAAACACC+TGG | + | chr2_3:10232693-10232712 | Msa0277600:CDS | 45.0% | |
| CGGTCGAATTGCCGTAAATA+AGG | + | chr2_3:10233200-10233219 | Msa0277600:intron | 45.0% | |
| ! | CACGTGAGTTCTTTTTGGAC+TGG | - | chr2_3:10233432-10233451 | None:intergenic | 45.0% |
| CAGTCCAAAAAGAACTCACG+TGG | + | chr2_3:10233430-10233449 | Msa0277600:intron | 45.0% | |
| GAAATGTGACAACCCTTTCG+TGG | - | chr2_3:10233538-10233557 | None:intergenic | 45.0% | |
| GGTTGTCACATTTCCAGACT+AGG | + | chr2_3:10233544-10233563 | Msa0277600:intron | 45.0% | |
| CTGAGAGGAAGATAAGGTCA+GGG | - | chr2_3:10233613-10233632 | None:intergenic | 45.0% | |
| ACTGAGAGGAAGATAAGGTC+AGG | - | chr2_3:10233614-10233633 | None:intergenic | 45.0% | |
| ! | ACTCTTTCTACGGGTGCTAT+CGG | - | chr2_3:10233750-10233769 | None:intergenic | 45.0% |
| CCTTCTACCACTCTTTCTAC+GGG | - | chr2_3:10233759-10233778 | None:intergenic | 45.0% | |
| CCCTTCTACCACTCTTTCTA+CGG | - | chr2_3:10233760-10233779 | None:intergenic | 45.0% | |
| CCGTAGAAAGAGTGGTAGAA+GGG | + | chr2_3:10233757-10233776 | Msa0277600:CDS | 45.0% | |
| CGTAGAAAGAGTGGTAGAAG+GGG | + | chr2_3:10233758-10233777 | Msa0277600:CDS | 45.0% | |
| ACCTTATGGTGTATGGAAGC+TGG | + | chr2_3:10233796-10233815 | Msa0277600:three_prime_UTR | 45.0% | |
| TCCAGCTTCCATACACCATA+AGG | - | chr2_3:10233800-10233819 | None:intergenic | 45.0% | |
| TGCCACAATTCTGTTTGGCA+TGG | - | chr2_3:10233840-10233859 | None:intergenic | 45.0% | |
| ! | TGTGTTCAGCTTCGAGCTTT+TGG | + | chr2_3:10234030-10234049 | Msa0277600:three_prime_UTR | 45.0% |
| !! | TAAAATTATACAAAATTTAA+TGG | + | chr2_3:10231967-10231986 | Msa0277600:intron | 5.0% |
| !! | AAAATTATACAAAATTTAAT+GGG | + | chr2_3:10231968-10231987 | Msa0277600:intron | 5.0% |
| TTGGATACTGATGCTGCTGC+TGG | - | chr2_3:10231172-10231191 | None:intergenic | 50.0% | |
| ! | CGGAACCGCATTTTCAACCA+TGG | + | chr2_3:10231213-10231232 | Msa0277600:exon | 50.0% |
| GAGAAAGGTTAGGGAGCCAA+AGG | + | chr2_3:10231334-10231353 | Msa0277600:CDS | 50.0% | |
| TTGGGTCCAGCTGTTAAGGA+TGG | + | chr2_3:10231371-10231390 | Msa0277600:CDS | 50.0% | |
| ! | TGGTGAACATGTTTTCGGCG+TGG | + | chr2_3:10231391-10231410 | Msa0277600:CDS | 50.0% |
| GAAACCCTTGTCCGTATCAC+TGG | + | chr2_3:10231568-10231587 | Msa0277600:CDS | 50.0% | |
| ATCCTGTGCTGCAAGCATAG+CGG | - | chr2_3:10232376-10232395 | None:intergenic | 50.0% | |
| ! | TCTTGTTTCCACCAGTGGCA+CGG | - | chr2_3:10232683-10232702 | None:intergenic | 50.0% |
| !! | TTTCTGGTGGTGGTTGCTGT+AGG | + | chr2_3:10233382-10233401 | Msa0277600:intron | 50.0% |
| ! | TTTCTACGGGTGCTATCGGA+AGG | - | chr2_3:10233746-10233765 | None:intergenic | 50.0% |
| GATAGCACCCGTAGAAAGAG+TGG | + | chr2_3:10233749-10233768 | Msa0277600:CDS | 50.0% | |
| CCCGTAGAAAGAGTGGTAGA+AGG | + | chr2_3:10233756-10233775 | Msa0277600:CDS | 50.0% | |
| AGAGTGGTAGAAGGGGTAGA+AGG | + | chr2_3:10233765-10233784 | Msa0277600:CDS | 50.0% | |
| GCTGCAAGCATAGCGGCATA+GGG | - | chr2_3:10232369-10232388 | None:intergenic | 55.0% | |
| TGCTGCAAGCATAGCGGCAT+AGG | - | chr2_3:10232370-10232389 | None:intergenic | 55.0% | |
| CACATTAAGCTCCGTGCCAC+TGG | + | chr2_3:10232669-10232688 | Msa0277600:CDS | 55.0% | |
| ! | ATTAAGCTCCGTGCCACTGG+TGG | + | chr2_3:10232672-10232691 | Msa0277600:CDS | 55.0% |
| AAGACCAAAACACCTGGCCC+TGG | + | chr2_3:10232699-10232718 | Msa0277600:CDS | 55.0% | |
| GAAGAGCAGCTTGAGCACCA+GGG | - | chr2_3:10232719-10232738 | None:intergenic | 55.0% | |
| ! | CGGGTGCTATCGGAAGGAAT+GGG | - | chr2_3:10233740-10233759 | None:intergenic | 55.0% |
| ! | ACGGGTGCTATCGGAAGGAA+TGG | - | chr2_3:10233741-10233760 | None:intergenic | 55.0% |
| ACGGACAAGGGTTTCCCTGC+CGG | - | chr2_3:10231563-10231582 | None:intergenic | 60.0% | |
| TGCCGCTATGCTTGCAGCAC+AGG | + | chr2_3:10232371-10232390 | Msa0277600:CDS | 60.0% | |
| ! | AGCACCAGGGCCAGGTGTTT+TGG | - | chr2_3:10232706-10232725 | None:intergenic | 60.0% |
| CGAAGAGCAGCTTGAGCACC+AGG | - | chr2_3:10232720-10232739 | None:intergenic | 60.0% | |
| CTTCGTGCCCTTGCTCGTTC+TGG | + | chr2_3:10232735-10232754 | Msa0277600:CDS | 60.0% | |
| GCAGCTTGAGCACCAGGGCC+AGG | - | chr2_3:10232714-10232733 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_3 | gene | 10231136 | 10234117 | 10231136 | ID=Msa0277600;Name=Msa0277600 |
| chr2_3 | mRNA | 10231136 | 10234117 | 10231136 | ID=Msa0277600-mRNA-1;Parent=Msa0277600;Name=Msa0277600-mRNA-1;_AED=0.04;_eAED=0.04;_QI=96|1|1|1|1|1|6|324|151 |
| chr2_3 | exon | 10231136 | 10231234 | 10231136 | ID=Msa0277600-mRNA-1:exon:4562;Parent=Msa0277600-mRNA-1 |
| chr2_3 | exon | 10231326 | 10231448 | 10231326 | ID=Msa0277600-mRNA-1:exon:4563;Parent=Msa0277600-mRNA-1 |
| chr2_3 | exon | 10231544 | 10231589 | 10231544 | ID=Msa0277600-mRNA-1:exon:4564;Parent=Msa0277600-mRNA-1 |
| chr2_3 | exon | 10232328 | 10232413 | 10232328 | ID=Msa0277600-mRNA-1:exon:4565;Parent=Msa0277600-mRNA-1 |
| chr2_3 | exon | 10232648 | 10232777 | 10232648 | ID=Msa0277600-mRNA-1:exon:4566;Parent=Msa0277600-mRNA-1 |
| chr2_3 | exon | 10233726 | 10234117 | 10233726 | ID=Msa0277600-mRNA-1:exon:4567;Parent=Msa0277600-mRNA-1 |
| chr2_3 | five_prime_UTR | 10231136 | 10231231 | 10231136 | ID=Msa0277600-mRNA-1:five_prime_utr;Parent=Msa0277600-mRNA-1 |
| chr2_3 | CDS | 10231232 | 10231234 | 10231232 | ID=Msa0277600-mRNA-1:cds;Parent=Msa0277600-mRNA-1 |
| chr2_3 | CDS | 10231326 | 10231448 | 10231326 | ID=Msa0277600-mRNA-1:cds;Parent=Msa0277600-mRNA-1 |
| chr2_3 | CDS | 10231544 | 10231589 | 10231544 | ID=Msa0277600-mRNA-1:cds;Parent=Msa0277600-mRNA-1 |
| chr2_3 | CDS | 10232328 | 10232413 | 10232328 | ID=Msa0277600-mRNA-1:cds;Parent=Msa0277600-mRNA-1 |
| chr2_3 | CDS | 10232648 | 10232777 | 10232648 | ID=Msa0277600-mRNA-1:cds;Parent=Msa0277600-mRNA-1 |
| chr2_3 | CDS | 10233726 | 10233793 | 10233726 | ID=Msa0277600-mRNA-1:cds;Parent=Msa0277600-mRNA-1 |
| chr2_3 | three_prime_UTR | 10233794 | 10234117 | 10233794 | ID=Msa0277600-mRNA-1:three_prime_utr;Parent=Msa0277600-mRNA-1 |
| Gene Sequence |
| Protein sequence |
