AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1433600

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1433600 MtrunA17_Chr4g0060631 96.767 433 14 0 1 433 1 433 0.0 859
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1433600 AT3G47610.1 60.780 436 137 10 1 432 1 406 4.78e-173 491

Find 119 sgRNAs with CRISPR-Local

Find 606 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GTTCTTCTGCAGAATATTAT+TGG 0.176922 tig0027382:-14438 Msa1433600:intron
ACAAGTGATTGTATTTAAAA+AGG 0.203414 tig0027382:-12238 Msa1433600:three_prime_UTR
GACATATGATAATTTGTAAA+AGG 0.233459 tig0027382:-12522 Msa1433600:exon
TTGGATGAAGAGATCATAAA+AGG 0.245538 tig0027382:-16103 Msa1433600:CDS
ATTGAAACGGGTTTGGGATT+AGG 0.274232 tig0027382:-16127 Msa1433600:CDS
CGCGAAGATTGAAACGGGTT+TGG 0.310438 tig0027382:-16134 Msa1433600:CDS
AACGGGTTTGGGATTAGGTT+TGG 0.345156 tig0027382:-16122 Msa1433600:CDS
TTGGAACACAATTGATCCTT+TGG 0.349144 tig0027382:+14086 None:intergenic
GCGAAGATTGAAACGGGTTT+GGG 0.352640 tig0027382:-16133 Msa1433600:CDS
CACAACAACTTTATTCCGTT+TGG 0.355657 tig0027382:+13613 None:intergenic
AGATGATGGTGAATGTTTAC+TGG 0.374985 tig0027382:-12544 Msa1433600:CDS
TCACAGATTTCCCTACTTCC+TGG 0.375013 tig0027382:+14415 None:intergenic
TGAATCTTAAGAGTTGGATT+TGG 0.375633 tig0027382:+12795 None:intergenic
ACTATCATGCTGCACTCTTC+CGG 0.379956 tig0027382:+12662 None:intergenic
ACTTGTAATCGATTGCTTGC+CGG 0.384653 tig0027382:+12255 None:intergenic
TGGCAAGGACCTTCAGGAAA+TGG 0.385660 tig0027382:-12582 Msa1433600:CDS
GGAAACGGCGGGGCAGTGGC+TGG 0.390936 tig0027382:-16179 Msa1433600:CDS
CGGTTCACTTCCCTTTCATC+TGG 0.392193 tig0027382:+12825 None:intergenic
GAGTGCTGCCGGAAGTAGTC+AGG 0.393343 tig0027382:-14217 Msa1433600:CDS
CCCACTTCCCTGACTACTTC+CGG 0.400784 tig0027382:+14209 None:intergenic
AAGCGCATGGTCTTCCTTGT+TGG 0.411578 tig0027382:+14067 None:intergenic
TATCAAGACCAACGATTTCA+AGG 0.414897 tig0027382:+12476 None:intergenic
TTGCTTGCCGGTGTACACTA+TGG 0.421706 tig0027382:+12267 None:intergenic
TTGTACGAGCGGCAGCATTT+CGG 0.424842 tig0027382:+13836 None:intergenic
GTTGGTCTTGATAATCTTTG+AGG 0.426454 tig0027382:-12466 Msa1433600:three_prime_UTR
CTTCCGGCAGCACTCTTGTT+GGG 0.427884 tig0027382:+14225 None:intergenic
CTTGATTCACTACTTGTAGC+TGG 0.431063 tig0027382:+14183 None:intergenic
AATATTATTGGCCAGGAAGT+AGG 0.433674 tig0027382:-14426 Msa1433600:CDS
GGGTTGTGCTTGGAGATTAC+CGG 0.434327 tig0027382:-12681 Msa1433600:CDS
GGGCAGCTCATATGCTGGTC+TGG 0.440906 tig0027382:-13932 Msa1433600:CDS
AGAGAAAGAGAAAGAGAAGA+TGG 0.441847 tig0027382:-16200 Msa1433600:exon
AATCCACTACTCGAGTAAAC+AGG 0.441888 tig0027382:+16236 None:intergenic
GAGTTGGATTTGGTATAATA+CGG 0.445430 tig0027382:+12805 None:intergenic
ACTTCCGGCAGCACTCTTGT+TGG 0.454757 tig0027382:+14224 None:intergenic
CTTAAGCAAGGGGTTGTGCT+TGG 0.457367 tig0027382:-12691 Msa1433600:CDS
GACAAAACTTACAATTTCAG+AGG 0.469691 tig0027382:-16266 Msa1433600:five_prime_UTR
ATGAGCTTGATTCAAATACT+TGG 0.472785 tig0027382:-13786 Msa1433600:CDS
CACTCTTGTTGGGTTCTGCA+TGG 0.472881 tig0027382:+14235 None:intergenic
TTCAAATACTTGGTTGTCAA+AGG 0.472906 tig0027382:-13776 Msa1433600:CDS
TTGGTCTTGATAATCTTTGA+GGG 0.474390 tig0027382:-12465 Msa1433600:three_prime_UTR
TTGTGCGCGAAGATTGAAAC+GGG 0.476860 tig0027382:-16139 Msa1433600:CDS
ACTGGCTGAATCTTAAGAGT+TGG 0.477921 tig0027382:+12789 None:intergenic
TGTCTAAGCCTTGAAATCGT+TGG 0.478812 tig0027382:-12484 Msa1433600:three_prime_UTR
TAAGAAAAGAACGCCGAAAA+CGG 0.479883 tig0027382:-14274 Msa1433600:CDS
AGATGGAAACGGCGGGGCAG+TGG 0.482228 tig0027382:-16183 Msa1433600:CDS
CTTGATAATCTTTGAGGGAA+AGG 0.482866 tig0027382:-12460 Msa1433600:three_prime_UTR
CTGTGATTGAAGAATACTTA+AGG 0.482941 tig0027382:-14398 Msa1433600:CDS
GTCAGTAATTGTTTATCTTG+TGG 0.484017 tig0027382:-14021 Msa1433600:CDS
GGTAGTTGGAACATCTGATT+TGG 0.492893 tig0027382:+14350 None:intergenic
AAAGAGAAGATGGAAACGGC+GGG 0.500722 tig0027382:-16190 Msa1433600:exon
CTGCTGAAGCTTACGCAAAG+AGG 0.503866 tig0027382:-13873 Msa1433600:CDS
GTGGCTGGAGAAGGCGTTGG+TGG 0.506843 tig0027382:-16164 Msa1433600:CDS
TAGGCATGTAATGTGGTAGT+TGG 0.509651 tig0027382:+14336 None:intergenic
AAGAGTGCAGCATGATAGTA+AGG 0.510081 tig0027382:-12658 Msa1433600:CDS
ATATTATTGGCCAGGAAGTA+GGG 0.512996 tig0027382:-14425 Msa1433600:CDS
GCACGCAATATTCTATTGTC+CGG 0.517887 tig0027382:+12849 None:intergenic
CAAGCTCATAGTAGTCACTT+TGG 0.522874 tig0027382:+13800 None:intergenic
TCTGCAGAATATTATTGGCC+AGG 0.524274 tig0027382:-14433 Msa1433600:intron
GGCGGGGCAGTGGCTGGAGA+AGG 0.528965 tig0027382:-16173 Msa1433600:CDS
TTGCCTGTTTACTCGAGTAG+TGG 0.530310 tig0027382:-16239 Msa1433600:five_prime_UTR
GCAGCCTCAGTCTCTGACAA+TGG 0.538727 tig0027382:+13895 None:intergenic
GCAGTGGCTGGAGAAGGCGT+TGG 0.547500 tig0027382:-16167 Msa1433600:CDS
ATTGCGTGCACCAGATGAAA+GGG 0.550888 tig0027382:-12835 Msa1433600:CDS
TATTGCGTGCACCAGATGAA+AGG 0.551745 tig0027382:-12836 Msa1433600:CDS
GAACCCAACAAGAGTGCTGC+CGG 0.552075 tig0027382:-14228 Msa1433600:CDS
GCCGGAAGTAGTCAGGGAAG+TGG 0.555855 tig0027382:-14210 Msa1433600:CDS
TGGATGAAGAGATCATAAAA+GGG 0.557171 tig0027382:-16102 Msa1433600:CDS
GCCTCCATTGTCAGAGACTG+AGG 0.558157 tig0027382:-13899 Msa1433600:CDS
AAAGAGGGCAGCTCATATGC+TGG 0.558969 tig0027382:-13937 Msa1433600:CDS
AACTGAAGGTGGCTTGACAT+AGG 0.559805 tig0027382:+14317 None:intergenic
AGAGAAAGAGAAGATGGAAA+CGG 0.566259 tig0027382:-16194 Msa1433600:exon
ACAAAACTTACAATTTCAGA+GGG 0.570616 tig0027382:-16265 Msa1433600:five_prime_UTR
TGCCGGTGTACACTATGGCA+AGG 0.571363 tig0027382:+12272 None:intergenic
TGGTGCCCTTGTGTTGAAAG+AGG 0.572435 tig0027382:-13953 Msa1433600:CDS
GAAAACTATTTCACTTGCTG+AGG 0.574808 tig0027382:-14112 Msa1433600:CDS
AGCTGCCCTCTTTCAACACA+AGG 0.575256 tig0027382:+13947 None:intergenic
GTTTGTGAGCAAGAAGGTGA+GGG 0.578562 tig0027382:-13991 Msa1433600:CDS
CCGAAAACGGTGACTGTCCG+TGG 0.579223 tig0027382:-14261 Msa1433600:CDS
AAATACTTGGTTGTCAAAGG+AGG 0.580391 tig0027382:-13773 Msa1433600:intron
TCACTTGCTGAGGCAGCCAA+AGG 0.581769 tig0027382:-14102 Msa1433600:CDS
ATCAGACAAAGGCTTAAGCA+AGG 0.583729 tig0027382:-12703 Msa1433600:CDS
AAGATAAACAATTACTGACT+AGG 0.584058 tig0027382:+14025 None:intergenic
AAGAAGCTGAACGAGCCAAA+CGG 0.587119 tig0027382:-13628 Msa1433600:CDS
AGTGCTGCCGGAAGTAGTCA+GGG 0.587401 tig0027382:-14216 Msa1433600:CDS
AAAATTGTTTGTGAGCAAGA+AGG 0.588810 tig0027382:-13997 Msa1433600:CDS
TTGCAAATTGACTTTGCTGA+AGG 0.589005 tig0027382:+12625 None:intergenic
ATCAATAACTGTTGTACGAG+CGG 0.589701 tig0027382:+13825 None:intergenic
TCAGACAAAGGCTTAAGCAA+GGG 0.592005 tig0027382:-12702 Msa1433600:CDS
CAAGGACCTTCAGGAAATGG+AGG 0.593884 tig0027382:-12579 Msa1433600:CDS
TCCCTTGCCATAGTGTACAC+CGG 0.601508 tig0027382:-12274 Msa1433600:three_prime_UTR
CTAGTAGATGTCTCAACTGA+AGG 0.601694 tig0027382:+14303 None:intergenic
GTAAGAAGTCTGCAAACGAT+AGG 0.602940 tig0027382:-12746 Msa1433600:CDS
CCGGAAGTAGTCAGGGAAGT+GGG 0.604971 tig0027382:-14209 Msa1433600:CDS
GAAAGAGAAGATGGAAACGG+CGG 0.608003 tig0027382:-16191 Msa1433600:exon
GGATCAATTGTGTTCCAACA+AGG 0.608700 tig0027382:-14081 Msa1433600:CDS
TGTTTGTGAGCAAGAAGGTG+AGG 0.614729 tig0027382:-13992 Msa1433600:CDS
TGCAGCCCTCCATTTCCTGA+AGG 0.615705 tig0027382:+12573 None:intergenic
GTTGTGCGCGAAGATTGAAA+CGG 0.616733 tig0027382:-16140 Msa1433600:CDS
TGAAGTTTCAGAATCACAGC+CGG 0.617944 tig0027382:-12868 Msa1433600:CDS
GGGCTGCATGTTGAAGATGA+TGG 0.619050 tig0027382:-12558 Msa1433600:CDS
CAGACAAAGGCTTAAGCAAG+GGG 0.619290 tig0027382:-12701 Msa1433600:CDS
GAGGGACCTTGCAATTTCTG+TGG 0.621085 tig0027382:-13973 Msa1433600:CDS
GCCGGTGTACACTATGGCAA+GGG 0.621781 tig0027382:+12273 None:intergenic
TCAGTTGAGACATCTACTAG+TGG 0.624291 tig0027382:-14300 Msa1433600:CDS
AACGATAGGCAAGCAAACAA+AGG 0.628050 tig0027382:-12732 Msa1433600:CDS
AGGGCACCACAGAAATTGCA+AGG 0.628209 tig0027382:+13967 None:intergenic
GGTGCCCTTGTGTTGAAAGA+GGG 0.630913 tig0027382:-13952 Msa1433600:CDS
AGGTACTCTTTAGCATCTCG+TGG 0.637087 tig0027382:+16052 None:intergenic
AAAGGTAAGCAATCAGACAA+AGG 0.638859 tig0027382:-12714 Msa1433600:CDS
AAGGACCTTCAGGAAATGGA+GGG 0.642103 tig0027382:-12578 Msa1433600:CDS
GCCTCAGTCTCTGACAATGG+AGG 0.654488 tig0027382:+13898 None:intergenic
TGGGTTCTGCATGGTCACCA+CGG 0.661716 tig0027382:+14244 None:intergenic
GTAGATGTCTCAACTGAAGG+TGG 0.666753 tig0027382:+14306 None:intergenic
TGATTGAAGAATACTTAAGG+CGG 0.677781 tig0027382:-14395 Msa1433600:CDS
CGACGCGCTTGACAAGCGCA+TGG 0.678400 tig0027382:+14054 None:intergenic
GAAGAATACTTAAGGCGGAG+AGG 0.683584 tig0027382:-14390 Msa1433600:CDS
CTTGACATAGGCATGTAATG+TGG 0.719022 tig0027382:+14329 None:intergenic
AAGAGAAGATGGAAACGGCG+GGG 0.724566 tig0027382:-16189 Msa1433600:exon
GCTGCCCTCTTTCAACACAA+GGG 0.727771 tig0027382:+13948 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AATTTAATTTTTATTTATAT+TGG - tig0027382:13515-13534 Msa1433600:intron 0.0%
!!! AATTTAATTTTTATTTATAT+TGG - tig0027382:13515-13534 Msa1433600:intron 0.0%
!!! AGTTTTTTTTTTTTTTTTTG+AGG - tig0027382:16079-16098 Msa1433600:CDS 10.0%
!!! GTTTTTTTTTTTTTTTTTGA+GGG - tig0027382:16080-16099 Msa1433600:CDS 10.0%
!!! AGTTTTTTTTTTTTTTTTTG+AGG - tig0027382:16079-16098 Msa1433600:CDS 10.0%
!!! GTTTTTTTTTTTTTTTTTGA+GGG - tig0027382:16080-16099 Msa1433600:CDS 10.0%
!! AAAAAGAAAAAAGTAGAAAA+GGG + tig0027382:12498-12517 None:intergenic 15.0%
!! AAAAAAGAAAAAAGTAGAAA+AGG + tig0027382:12499-12518 None:intergenic 15.0%
!!! TATTCATGTTTAAATTTTTG+TGG - tig0027382:13364-13383 Msa1433600:intron 15.0%
!! ACAAGTATTAATTGTAAATT+GGG - tig0027382:13626-13645 Msa1433600:CDS 15.0%
!! AATTGAGTAAAATTCAAATA+TGG + tig0027382:14805-14824 None:intergenic 15.0%
!! AGTTATTCATTAAAATGAAT+CGG - tig0027382:15229-15248 Msa1433600:intron 15.0%
!! AAAAAGAAAAAAGTAGAAAA+GGG + tig0027382:12498-12517 None:intergenic 15.0%
!! AAAAAAGAAAAAAGTAGAAA+AGG + tig0027382:12499-12518 None:intergenic 15.0%
!!! TATTCATGTTTAAATTTTTG+TGG - tig0027382:13364-13383 Msa1433600:intron 15.0%
!! ACAAGTATTAATTGTAAATT+GGG - tig0027382:13626-13645 Msa1433600:CDS 15.0%
!! AATTGAGTAAAATTCAAATA+TGG + tig0027382:14805-14824 None:intergenic 15.0%
!! AGTTATTCATTAAAATGAAT+CGG - tig0027382:15229-15248 Msa1433600:intron 15.0%
!!! TAATGACGAATTATATTTTG+TGG - tig0027382:12575-12594 Msa1433600:CDS 20.0%
!!! AATCGATTTATCTTTATAGT+TGG - tig0027382:12603-12622 Msa1433600:CDS 20.0%
!!! AAATCTGTTATTTAGATTGA+TGG - tig0027382:12642-12661 Msa1433600:CDS 20.0%
!!! AATCTGTTATTTAGATTGAT+GGG - tig0027382:12643-12662 Msa1433600:CDS 20.0%
!! ATAACAATAAGATCATATCT+TGG + tig0027382:13101-13120 None:intergenic 20.0%
!! ATATGATCTTATTGTTATCT+CGG - tig0027382:13103-13122 Msa1433600:intron 20.0%
!!! AGTTTTAAAGTTTGTTTACT+GGG + tig0027382:13248-13267 None:intergenic 20.0%
!! TATTTATATTGGATACCTTA+AGG - tig0027382:13526-13545 Msa1433600:intron 20.0%
!! CACAAGTATTAATTGTAAAT+TGG - tig0027382:13625-13644 Msa1433600:CDS 20.0%
!! ACGTCAAAAATTTCAAATTT+AGG + tig0027382:13934-13953 None:intergenic 20.0%
!!! CAATTTTATCTTCTTTCTTT+AGG - tig0027382:14820-14839 Msa1433600:intron 20.0%
!!! TCGCTTGTTTTTATTTAAAA+TGG + tig0027382:15155-15174 None:intergenic 20.0%
!! GTTATTCATTAAAATGAATC+GGG - tig0027382:15230-15249 Msa1433600:intron 20.0%
!! CAATACAAATTGAATTCTAT+CGG + tig0027382:15312-15331 None:intergenic 20.0%
!! CATAGATTCACTATAATTAA+TGG + tig0027382:15451-15470 None:intergenic 20.0%
!!! CAGATTCAAATGAAAAATTT+TGG - tig0027382:15905-15924 Msa1433600:intron 20.0%
!!! GACATATGATAATTTGTAAA+AGG - tig0027382:15985-16004 Msa1433600:intron 20.0%
!! AATCACTTAAAAATCTCTAT+AGG + tig0027382:16188-16207 None:intergenic 20.0%
!! ACAAGTGATTGTATTTAAAA+AGG - tig0027382:16269-16288 Msa1433600:five_prime_UTR 20.0%
!!! TAATGACGAATTATATTTTG+TGG - tig0027382:12575-12594 Msa1433600:CDS 20.0%
!!! AATCGATTTATCTTTATAGT+TGG - tig0027382:12603-12622 Msa1433600:CDS 20.0%
!!! AAATCTGTTATTTAGATTGA+TGG - tig0027382:12642-12661 Msa1433600:CDS 20.0%
!!! AATCTGTTATTTAGATTGAT+GGG - tig0027382:12643-12662 Msa1433600:CDS 20.0%
!! ATAACAATAAGATCATATCT+TGG + tig0027382:13101-13120 None:intergenic 20.0%
!! ATATGATCTTATTGTTATCT+CGG - tig0027382:13103-13122 Msa1433600:intron 20.0%
!!! AGTTTTAAAGTTTGTTTACT+GGG + tig0027382:13248-13267 None:intergenic 20.0%
!! TATTTATATTGGATACCTTA+AGG - tig0027382:13526-13545 Msa1433600:intron 20.0%
!! CACAAGTATTAATTGTAAAT+TGG - tig0027382:13625-13644 Msa1433600:CDS 20.0%
!! ACGTCAAAAATTTCAAATTT+AGG + tig0027382:13934-13953 None:intergenic 20.0%
!!! CAATTTTATCTTCTTTCTTT+AGG - tig0027382:14820-14839 Msa1433600:intron 20.0%
!!! TCGCTTGTTTTTATTTAAAA+TGG + tig0027382:15155-15174 None:intergenic 20.0%
!! GTTATTCATTAAAATGAATC+GGG - tig0027382:15230-15249 Msa1433600:intron 20.0%
!! CAATACAAATTGAATTCTAT+CGG + tig0027382:15312-15331 None:intergenic 20.0%
!! CATAGATTCACTATAATTAA+TGG + tig0027382:15451-15470 None:intergenic 20.0%
!!! CAGATTCAAATGAAAAATTT+TGG - tig0027382:15905-15924 Msa1433600:intron 20.0%
!!! GACATATGATAATTTGTAAA+AGG - tig0027382:15985-16004 Msa1433600:intron 20.0%
!! AATCACTTAAAAATCTCTAT+AGG + tig0027382:16188-16207 None:intergenic 20.0%
!! ACAAGTGATTGTATTTAAAA+AGG - tig0027382:16269-16288 Msa1433600:five_prime_UTR 20.0%
! ACAAAACTTACAATTTCAGA+GGG - tig0027382:12242-12261 Msa1433600:three_prime_UTR 25.0%
!! ATCAAAATCGTAAACCTTTT+TGG - tig0027382:12742-12761 Msa1433600:CDS 25.0%
!!! GAGTTTTAAAGTTTGTTTAC+TGG + tig0027382:13249-13268 None:intergenic 25.0%
!!! GTAAACAAACTTTAAAACTC+AGG - tig0027382:13249-13268 Msa1433600:intron 25.0%
! AGTACATAAATTGACGTTTA+AGG - tig0027382:13314-13333 Msa1433600:intron 25.0%
!! TCATGTTTAAATTTTTGTGG+TGG - tig0027382:13367-13386 Msa1433600:intron 25.0%
! TAAATCATTCAGATACTTCT+GGG + tig0027382:13496-13515 None:intergenic 25.0%
! TTAAATCATTCAGATACTTC+TGG + tig0027382:13497-13516 None:intergenic 25.0%
! TGTAAATTGGGATCATTATA+TGG - tig0027382:13638-13657 Msa1433600:CDS 25.0%
!! GTTGTTTATATGGTATGTTT+TGG - tig0027382:13716-13735 Msa1433600:intron 25.0%
!!! TATGGTATGTTTTGGTTTAA+AGG - tig0027382:13724-13743 Msa1433600:intron 25.0%
!! TTCAAATTTAGGATACGATA+CGG + tig0027382:13923-13942 None:intergenic 25.0%
!! AAGATAAACAATTACTGACT+AGG + tig0027382:14485-14504 None:intergenic 25.0%
! CGATAGAATTCAATTTGTAT+TGG - tig0027382:15310-15329 Msa1433600:intron 25.0%
! ACAAATATACAAGCAACAAT+GGG + tig0027382:15522-15541 None:intergenic 25.0%
! GACTCTAATTTATATCTTTC+AGG - tig0027382:15600-15619 Msa1433600:intron 25.0%
!!! TCAAATGAAAAATTTTGGCA+AGG - tig0027382:15910-15929 Msa1433600:intron 25.0%
! ACAAAACTTACAATTTCAGA+GGG - tig0027382:12242-12261 Msa1433600:three_prime_UTR 25.0%
!! ATCAAAATCGTAAACCTTTT+TGG - tig0027382:12742-12761 Msa1433600:CDS 25.0%
!!! GAGTTTTAAAGTTTGTTTAC+TGG + tig0027382:13249-13268 None:intergenic 25.0%
!!! GTAAACAAACTTTAAAACTC+AGG - tig0027382:13249-13268 Msa1433600:intron 25.0%
! AGTACATAAATTGACGTTTA+AGG - tig0027382:13314-13333 Msa1433600:intron 25.0%
!! TCATGTTTAAATTTTTGTGG+TGG - tig0027382:13367-13386 Msa1433600:intron 25.0%
! TAAATCATTCAGATACTTCT+GGG + tig0027382:13496-13515 None:intergenic 25.0%
! TTAAATCATTCAGATACTTC+TGG + tig0027382:13497-13516 None:intergenic 25.0%
! TGTAAATTGGGATCATTATA+TGG - tig0027382:13638-13657 Msa1433600:CDS 25.0%
!! GTTGTTTATATGGTATGTTT+TGG - tig0027382:13716-13735 Msa1433600:intron 25.0%
!!! TATGGTATGTTTTGGTTTAA+AGG - tig0027382:13724-13743 Msa1433600:intron 25.0%
!! TTCAAATTTAGGATACGATA+CGG + tig0027382:13923-13942 None:intergenic 25.0%
!! AAGATAAACAATTACTGACT+AGG + tig0027382:14485-14504 None:intergenic 25.0%
! CGATAGAATTCAATTTGTAT+TGG - tig0027382:15310-15329 Msa1433600:intron 25.0%
! ACAAATATACAAGCAACAAT+GGG + tig0027382:15522-15541 None:intergenic 25.0%
! GACTCTAATTTATATCTTTC+AGG - tig0027382:15600-15619 Msa1433600:intron 25.0%
!!! TCAAATGAAAAATTTTGGCA+AGG - tig0027382:15910-15929 Msa1433600:intron 25.0%
GACAAAACTTACAATTTCAG+AGG - tig0027382:12241-12260 Msa1433600:three_prime_UTR 30.0%
TTGGATGAAGAGATCATAAA+AGG - tig0027382:12404-12423 Msa1433600:three_prime_UTR 30.0%
TGGATGAAGAGATCATAAAA+GGG - tig0027382:12405-12424 Msa1433600:three_prime_UTR 30.0%
AGTCTATGAAATTGTAGTAG+TGG - tig0027382:12538-12557 Msa1433600:CDS 30.0%
!! TGCATAATTCTTGTTGTTTC+TGG - tig0027382:12681-12700 Msa1433600:CDS 30.0%
TCGCAGAACTACTATAAATA+GGG + tig0027382:12964-12983 None:intergenic 30.0%
ATCGCAGAACTACTATAAAT+AGG + tig0027382:12965-12984 None:intergenic 30.0%
ATACGAACAGATGTAAACTT+AGG + tig0027382:13042-13061 None:intergenic 30.0%
! TTAAAGTTTGTTTACTGGGA+TGG + tig0027382:13244-13263 None:intergenic 30.0%
CAATTACCAATTCAATTACG+AGG + tig0027382:13285-13304 None:intergenic 30.0%
CATAAATTGACGTTTAAGGA+TGG - tig0027382:13318-13337 Msa1433600:intron 30.0%
TTAAATCATTCGGATACTTC+TGG + tig0027382:13581-13600 None:intergenic 30.0%
TTATATGGCCATTACTTGAA+AGG - tig0027382:13653-13672 Msa1433600:CDS 30.0%
TATATGGCCATTACTTGAAA+GGG - tig0027382:13654-13673 Msa1433600:CDS 30.0%
GGTTTAAAGGATATCTTAGT+TGG - tig0027382:13737-13756 Msa1433600:intron 30.0%
TACACCAAGTCAAAATACAA+TGG + tig0027382:13771-13790 None:intergenic 30.0%
! CAACATATTCTTTGTTGTAC+TGG - tig0027382:14015-14034 Msa1433600:CDS 30.0%
GTTCTTCTGCAGAATATTAT+TGG - tig0027382:14069-14088 Msa1433600:CDS 30.0%
CTGTGATTGAAGAATACTTA+AGG - tig0027382:14109-14128 Msa1433600:CDS 30.0%
TGATTGAAGAATACTTAAGG+CGG - tig0027382:14112-14131 Msa1433600:CDS 30.0%
GTCAGTAATTGTTTATCTTG+TGG - tig0027382:14486-14505 Msa1433600:intron 30.0%
AAAATTGTTTGTGAGCAAGA+AGG - tig0027382:14510-14529 Msa1433600:intron 30.0%
ATGAGCTTGATTCAAATACT+TGG - tig0027382:14721-14740 Msa1433600:intron 30.0%
TTCAAATACTTGGTTGTCAA+AGG - tig0027382:14731-14750 Msa1433600:intron 30.0%
CTTGTTGAAAAAGAAACAAG+AGG - tig0027382:14850-14869 Msa1433600:intron 30.0%
! CAATTTTAGGCAAGATCATA+TGG + tig0027382:14957-14976 None:intergenic 30.0%
! CAAATCTAACTGGCAATTTT+AGG + tig0027382:14970-14989 None:intergenic 30.0%
! CATGAATTTTCTTGCATGAT+TGG - tig0027382:14996-15015 Msa1433600:intron 30.0%
AGATGTGTATTATGGTATCA+TGG - tig0027382:15058-15077 Msa1433600:intron 30.0%
AATTCTATCGGTATAATACC+TGG + tig0027382:15300-15319 None:intergenic 30.0%
TAACCAGCTTTGCATATTAT+TGG - tig0027382:15369-15388 Msa1433600:intron 30.0%
AAACCAATAATATGCAAAGC+TGG + tig0027382:15375-15394 None:intergenic 30.0%
TAATGGCATACGTTTCTAAA+AGG + tig0027382:15434-15453 None:intergenic 30.0%
!!! ATCTATGCATAGTTTTAGAG+TGG - tig0027382:15464-15483 Msa1433600:intron 30.0%
TAAAGAGGAAGAATGTATCT+AGG + tig0027382:15493-15512 None:intergenic 30.0%
AACAATGGGAAAAAGTAAAG+AGG + tig0027382:15508-15527 None:intergenic 30.0%
GACAAATATACAAGCAACAA+TGG + tig0027382:15523-15542 None:intergenic 30.0%
! GAGTATCTGTTTTCTCATTT+TGG - tig0027382:15578-15597 Msa1433600:intron 30.0%
! GAGTTGGATTTGGTATAATA+CGG + tig0027382:15705-15724 None:intergenic 30.0%
TGAATCTTAAGAGTTGGATT+TGG + tig0027382:15715-15734 None:intergenic 30.0%
!! TTGGTCTTGATAATCTTTGA+GGG - tig0027382:16042-16061 Msa1433600:intron 30.0%
! GGGAGATAATGAAGAATTTT+TGG - tig0027382:16100-16119 Msa1433600:CDS 30.0%
! TTTTGGCAGCATATATTTTG+AGG - tig0027382:16117-16136 Msa1433600:CDS 30.0%
!! TTTGGCAGCATATATTTTGA+GGG - tig0027382:16118-16137 Msa1433600:CDS 30.0%
GACAAAACTTACAATTTCAG+AGG - tig0027382:12241-12260 Msa1433600:three_prime_UTR 30.0%
TTGGATGAAGAGATCATAAA+AGG - tig0027382:12404-12423 Msa1433600:three_prime_UTR 30.0%
TGGATGAAGAGATCATAAAA+GGG - tig0027382:12405-12424 Msa1433600:three_prime_UTR 30.0%
AGTCTATGAAATTGTAGTAG+TGG - tig0027382:12538-12557 Msa1433600:CDS 30.0%
!! TGCATAATTCTTGTTGTTTC+TGG - tig0027382:12681-12700 Msa1433600:CDS 30.0%
TCGCAGAACTACTATAAATA+GGG + tig0027382:12964-12983 None:intergenic 30.0%
ATCGCAGAACTACTATAAAT+AGG + tig0027382:12965-12984 None:intergenic 30.0%
ATACGAACAGATGTAAACTT+AGG + tig0027382:13042-13061 None:intergenic 30.0%
! TTAAAGTTTGTTTACTGGGA+TGG + tig0027382:13244-13263 None:intergenic 30.0%
CAATTACCAATTCAATTACG+AGG + tig0027382:13285-13304 None:intergenic 30.0%
CATAAATTGACGTTTAAGGA+TGG - tig0027382:13318-13337 Msa1433600:intron 30.0%
TTAAATCATTCGGATACTTC+TGG + tig0027382:13581-13600 None:intergenic 30.0%
TTATATGGCCATTACTTGAA+AGG - tig0027382:13653-13672 Msa1433600:CDS 30.0%
TATATGGCCATTACTTGAAA+GGG - tig0027382:13654-13673 Msa1433600:CDS 30.0%
GGTTTAAAGGATATCTTAGT+TGG - tig0027382:13737-13756 Msa1433600:intron 30.0%
TACACCAAGTCAAAATACAA+TGG + tig0027382:13771-13790 None:intergenic 30.0%
! CAACATATTCTTTGTTGTAC+TGG - tig0027382:14015-14034 Msa1433600:CDS 30.0%
GTTCTTCTGCAGAATATTAT+TGG - tig0027382:14069-14088 Msa1433600:CDS 30.0%
CTGTGATTGAAGAATACTTA+AGG - tig0027382:14109-14128 Msa1433600:CDS 30.0%
TGATTGAAGAATACTTAAGG+CGG - tig0027382:14112-14131 Msa1433600:CDS 30.0%
GTCAGTAATTGTTTATCTTG+TGG - tig0027382:14486-14505 Msa1433600:intron 30.0%
AAAATTGTTTGTGAGCAAGA+AGG - tig0027382:14510-14529 Msa1433600:intron 30.0%
ATGAGCTTGATTCAAATACT+TGG - tig0027382:14721-14740 Msa1433600:intron 30.0%
TTCAAATACTTGGTTGTCAA+AGG - tig0027382:14731-14750 Msa1433600:intron 30.0%
CTTGTTGAAAAAGAAACAAG+AGG - tig0027382:14850-14869 Msa1433600:intron 30.0%
! CAATTTTAGGCAAGATCATA+TGG + tig0027382:14957-14976 None:intergenic 30.0%
! CAAATCTAACTGGCAATTTT+AGG + tig0027382:14970-14989 None:intergenic 30.0%
! CATGAATTTTCTTGCATGAT+TGG - tig0027382:14996-15015 Msa1433600:intron 30.0%
AGATGTGTATTATGGTATCA+TGG - tig0027382:15058-15077 Msa1433600:intron 30.0%
AATTCTATCGGTATAATACC+TGG + tig0027382:15300-15319 None:intergenic 30.0%
TAACCAGCTTTGCATATTAT+TGG - tig0027382:15369-15388 Msa1433600:intron 30.0%
AAACCAATAATATGCAAAGC+TGG + tig0027382:15375-15394 None:intergenic 30.0%
TAATGGCATACGTTTCTAAA+AGG + tig0027382:15434-15453 None:intergenic 30.0%
!!! ATCTATGCATAGTTTTAGAG+TGG - tig0027382:15464-15483 Msa1433600:intron 30.0%
TAAAGAGGAAGAATGTATCT+AGG + tig0027382:15493-15512 None:intergenic 30.0%
AACAATGGGAAAAAGTAAAG+AGG + tig0027382:15508-15527 None:intergenic 30.0%
GACAAATATACAAGCAACAA+TGG + tig0027382:15523-15542 None:intergenic 30.0%
! GAGTATCTGTTTTCTCATTT+TGG - tig0027382:15578-15597 Msa1433600:intron 30.0%
! GAGTTGGATTTGGTATAATA+CGG + tig0027382:15705-15724 None:intergenic 30.0%
TGAATCTTAAGAGTTGGATT+TGG + tig0027382:15715-15734 None:intergenic 30.0%
!! TTGGTCTTGATAATCTTTGA+GGG - tig0027382:16042-16061 Msa1433600:intron 30.0%
! GGGAGATAATGAAGAATTTT+TGG - tig0027382:16100-16119 Msa1433600:CDS 30.0%
! TTTTGGCAGCATATATTTTG+AGG - tig0027382:16117-16136 Msa1433600:CDS 30.0%
!! TTTGGCAGCATATATTTTGA+GGG - tig0027382:16118-16137 Msa1433600:CDS 30.0%
AGAGAAAGAGAAAGAGAAGA+TGG - tig0027382:12307-12326 Msa1433600:three_prime_UTR 35.0%
AGAGAAAGAGAAGATGGAAA+CGG - tig0027382:12313-12332 Msa1433600:three_prime_UTR 35.0%
TGTAAGACAGTGGTTAAAAC+AGG - tig0027382:12895-12914 Msa1433600:intron 35.0%
ATTGATGAAGAGATCACACT+TGG - tig0027382:12929-12948 Msa1433600:intron 35.0%
TTGATGAAGAGATCACACTT+GGG - tig0027382:12930-12949 Msa1433600:intron 35.0%
GCAGAACTACTATAAATAGG+GGG + tig0027382:12962-12981 None:intergenic 35.0%
CGCAGAACTACTATAAATAG+GGG + tig0027382:12963-12982 None:intergenic 35.0%
! ATTTGCGTGTTGTTCTTTGT+TGG - tig0027382:13173-13192 Msa1433600:intron 35.0%
!! CTTTGTTGGACCTGTTTTAA+AGG - tig0027382:13187-13206 Msa1433600:intron 35.0%
CTTGTACCTCGTAATTGAAT+TGG - tig0027382:13276-13295 Msa1433600:intron 35.0%
GATACCTTAAGGATACGTTA+AGG - tig0027382:13537-13556 Msa1433600:intron 35.0%
GTATCCTTAACGTATCCTTA+AGG + tig0027382:13544-13563 None:intergenic 35.0%
! ATAGTCACCCTTTCAAGTAA+TGG + tig0027382:13664-13683 None:intergenic 35.0%
TGACTATCTTCATACTACCT+TGG - tig0027382:13677-13696 Msa1433600:intron 35.0%
CATAGTGCAGGTTGTTTATA+TGG - tig0027382:13706-13725 Msa1433600:intron 35.0%
!! AGGATATCTTAGTTGGTGAA+TGG - tig0027382:13744-13763 Msa1433600:intron 35.0%
!!! TGGTCCATTGTATTTTGACT+TGG - tig0027382:13764-13783 Msa1433600:intron 35.0%
AATATTATTGGCCAGGAAGT+AGG - tig0027382:14081-14100 Msa1433600:CDS 35.0%
ATATTATTGGCCAGGAAGTA+GGG - tig0027382:14082-14101 Msa1433600:CDS 35.0%
TAAGAAAAGAACGCCGAAAA+CGG - tig0027382:14233-14252 Msa1433600:CDS 35.0%
ACTTCCAAAAAGAAGAAAGC+TGG - tig0027382:14372-14391 Msa1433600:CDS 35.0%
CTTCCAAAAAGAAGAAAGCT+GGG - tig0027382:14373-14392 Msa1433600:CDS 35.0%
! TTTCCCAGCTTTCTTCTTTT+TGG + tig0027382:14379-14398 None:intergenic 35.0%
! GAAAACTATTTCACTTGCTG+AGG - tig0027382:14395-14414 Msa1433600:CDS 35.0%
TTGGAACACAATTGATCCTT+TGG + tig0027382:14424-14443 None:intergenic 35.0%
ATCAATAACTGTTGTACGAG+CGG + tig0027382:14685-14704 None:intergenic 35.0%
AAATACTTGGTTGTCAAAGG+AGG - tig0027382:14734-14753 Msa1433600:intron 35.0%
!! TTTGTTTGCAGCTTGTTATC+TGG - tig0027382:14765-14784 Msa1433600:intron 35.0%
GAAAAAGAAACAAGAGGAGA+TGG - tig0027382:14856-14875 Msa1433600:intron 35.0%
CACAACAACTTTATTCCGTT+TGG + tig0027382:14897-14916 None:intergenic 35.0%
! GTTGTGACTTTTGATCTAGT+TGG - tig0027382:14911-14930 Msa1433600:intron 35.0%
TGGCTAAAATAGAAACCTTG+CGG + tig0027382:14937-14956 None:intergenic 35.0%
! TCTTTTTGTGTGAACTTTCC+TGG - tig0027382:15028-15047 Msa1433600:intron 35.0%
! CTTTTTGTGTGAACTTTCCT+GGG - tig0027382:15029-15048 Msa1433600:intron 35.0%
GGATCTACAGATGTGTATTA+TGG - tig0027382:15050-15069 Msa1433600:intron 35.0%
! TACCTGGTGTGTATCTATTT+TGG + tig0027382:15284-15303 None:intergenic 35.0%
CAGATACTCTGCATAATACT+TGG + tig0027382:15567-15586 None:intergenic 35.0%
! TAAGATTCAGCCAGTTTTTG+TGG - tig0027382:15726-15745 Msa1433600:intron 35.0%
AAAGGTAAGCAATCAGACAA+AGG - tig0027382:15793-15812 Msa1433600:intron 35.0%
! TTGCAAATTGACTTTGCTGA+AGG + tig0027382:15885-15904 None:intergenic 35.0%
! AGATGATGGTGAATGTTTAC+TGG - tig0027382:15963-15982 Msa1433600:intron 35.0%
TATCAAGACCAACGATTTCA+AGG + tig0027382:16034-16053 None:intergenic 35.0%
!! GTTGGTCTTGATAATCTTTG+AGG - tig0027382:16041-16060 Msa1433600:intron 35.0%
! CTTGATAATCTTTGAGGGAA+AGG - tig0027382:16047-16066 Msa1433600:intron 35.0%
AGAGAAAGAGAAAGAGAAGA+TGG - tig0027382:12307-12326 Msa1433600:three_prime_UTR 35.0%
AGAGAAAGAGAAGATGGAAA+CGG - tig0027382:12313-12332 Msa1433600:three_prime_UTR 35.0%
TGTAAGACAGTGGTTAAAAC+AGG - tig0027382:12895-12914 Msa1433600:intron 35.0%
ATTGATGAAGAGATCACACT+TGG - tig0027382:12929-12948 Msa1433600:intron 35.0%
TTGATGAAGAGATCACACTT+GGG - tig0027382:12930-12949 Msa1433600:intron 35.0%
GCAGAACTACTATAAATAGG+GGG + tig0027382:12962-12981 None:intergenic 35.0%
CGCAGAACTACTATAAATAG+GGG + tig0027382:12963-12982 None:intergenic 35.0%
! ATTTGCGTGTTGTTCTTTGT+TGG - tig0027382:13173-13192 Msa1433600:intron 35.0%
!! CTTTGTTGGACCTGTTTTAA+AGG - tig0027382:13187-13206 Msa1433600:intron 35.0%
CTTGTACCTCGTAATTGAAT+TGG - tig0027382:13276-13295 Msa1433600:intron 35.0%
GATACCTTAAGGATACGTTA+AGG - tig0027382:13537-13556 Msa1433600:intron 35.0%
GTATCCTTAACGTATCCTTA+AGG + tig0027382:13544-13563 None:intergenic 35.0%
! ATAGTCACCCTTTCAAGTAA+TGG + tig0027382:13664-13683 None:intergenic 35.0%
TGACTATCTTCATACTACCT+TGG - tig0027382:13677-13696 Msa1433600:intron 35.0%
CATAGTGCAGGTTGTTTATA+TGG - tig0027382:13706-13725 Msa1433600:intron 35.0%
!! AGGATATCTTAGTTGGTGAA+TGG - tig0027382:13744-13763 Msa1433600:intron 35.0%
!!! TGGTCCATTGTATTTTGACT+TGG - tig0027382:13764-13783 Msa1433600:intron 35.0%
AATATTATTGGCCAGGAAGT+AGG - tig0027382:14081-14100 Msa1433600:CDS 35.0%
ATATTATTGGCCAGGAAGTA+GGG - tig0027382:14082-14101 Msa1433600:CDS 35.0%
TAAGAAAAGAACGCCGAAAA+CGG - tig0027382:14233-14252 Msa1433600:CDS 35.0%
ACTTCCAAAAAGAAGAAAGC+TGG - tig0027382:14372-14391 Msa1433600:CDS 35.0%
CTTCCAAAAAGAAGAAAGCT+GGG - tig0027382:14373-14392 Msa1433600:CDS 35.0%
! TTTCCCAGCTTTCTTCTTTT+TGG + tig0027382:14379-14398 None:intergenic 35.0%
! GAAAACTATTTCACTTGCTG+AGG - tig0027382:14395-14414 Msa1433600:CDS 35.0%
TTGGAACACAATTGATCCTT+TGG + tig0027382:14424-14443 None:intergenic 35.0%
ATCAATAACTGTTGTACGAG+CGG + tig0027382:14685-14704 None:intergenic 35.0%
AAATACTTGGTTGTCAAAGG+AGG - tig0027382:14734-14753 Msa1433600:intron 35.0%
!! TTTGTTTGCAGCTTGTTATC+TGG - tig0027382:14765-14784 Msa1433600:intron 35.0%
GAAAAAGAAACAAGAGGAGA+TGG - tig0027382:14856-14875 Msa1433600:intron 35.0%
CACAACAACTTTATTCCGTT+TGG + tig0027382:14897-14916 None:intergenic 35.0%
! GTTGTGACTTTTGATCTAGT+TGG - tig0027382:14911-14930 Msa1433600:intron 35.0%
TGGCTAAAATAGAAACCTTG+CGG + tig0027382:14937-14956 None:intergenic 35.0%
! TCTTTTTGTGTGAACTTTCC+TGG - tig0027382:15028-15047 Msa1433600:intron 35.0%
! CTTTTTGTGTGAACTTTCCT+GGG - tig0027382:15029-15048 Msa1433600:intron 35.0%
GGATCTACAGATGTGTATTA+TGG - tig0027382:15050-15069 Msa1433600:intron 35.0%
! TACCTGGTGTGTATCTATTT+TGG + tig0027382:15284-15303 None:intergenic 35.0%
CAGATACTCTGCATAATACT+TGG + tig0027382:15567-15586 None:intergenic 35.0%
! TAAGATTCAGCCAGTTTTTG+TGG - tig0027382:15726-15745 Msa1433600:intron 35.0%
AAAGGTAAGCAATCAGACAA+AGG - tig0027382:15793-15812 Msa1433600:intron 35.0%
! TTGCAAATTGACTTTGCTGA+AGG + tig0027382:15885-15904 None:intergenic 35.0%
! AGATGATGGTGAATGTTTAC+TGG - tig0027382:15963-15982 Msa1433600:intron 35.0%
TATCAAGACCAACGATTTCA+AGG + tig0027382:16034-16053 None:intergenic 35.0%
!! GTTGGTCTTGATAATCTTTG+AGG - tig0027382:16041-16060 Msa1433600:intron 35.0%
! CTTGATAATCTTTGAGGGAA+AGG - tig0027382:16047-16066 Msa1433600:intron 35.0%
AATCCACTACTCGAGTAAAC+AGG + tig0027382:12274-12293 None:intergenic 40.0%
! ATTGAAACGGGTTTGGGATT+AGG - tig0027382:12380-12399 Msa1433600:three_prime_UTR 40.0%
AAAGTAGAAAAGGGTAGCGA+GGG + tig0027382:12489-12508 None:intergenic 40.0%
AAAAGTAGAAAAGGGTAGCG+AGG + tig0027382:12490-12509 None:intergenic 40.0%
!!! TCGTAAACCTTTTTGGCTTG+TGG - tig0027382:12749-12768 Msa1433600:CDS 40.0%
!!! CGTAAACCTTTTTGGCTTGT+GGG - tig0027382:12750-12769 Msa1433600:CDS 40.0%
TCAGTTCAATGTTCCCATTC+AGG + tig0027382:12784-12803 None:intergenic 40.0%
ACTGATCACCTGATTAGTGA+TGG - tig0027382:12799-12818 Msa1433600:CDS 40.0%
CATTGACATCAGAATGCCTT+AGG + tig0027382:12877-12896 None:intergenic 40.0%
CTGATGTCAATGTAAGACAG+TGG - tig0027382:12885-12904 Msa1433600:CDS 40.0%
! TATAGTAGTTCTGCGATCTG+AGG - tig0027382:12968-12987 Msa1433600:intron 40.0%
! ATAGTAGTTCTGCGATCTGA+GGG - tig0027382:12969-12988 Msa1433600:intron 40.0%
ATGCTGCAATTAGTGTGTTC+CGG - tig0027382:12992-13011 Msa1433600:intron 40.0%
ACTTGCTTGAGTTCTTCATC+TGG - tig0027382:13128-13147 Msa1433600:intron 40.0%
CAAAGAACAACACGCAAATC+AGG + tig0027382:13172-13191 None:intergenic 40.0%
!! CATCTCGTGTCCTTTAAAAC+AGG + tig0027382:13200-13219 None:intergenic 40.0%
TGGAACTAAGAACCCAAAAC+AGG + tig0027382:13224-13243 None:intergenic 40.0%
!! ATACTTCTGGGATACGTATC+CGG + tig0027382:13484-13503 None:intergenic 40.0%
ATACTTCTGGATACGTATCC+GGG + tig0027382:13568-13587 None:intergenic 40.0%
GATACTTCTGGATACGTATC+CGG + tig0027382:13569-13588 None:intergenic 40.0%
! ATTTAGGATACGATACGGCT+TGG + tig0027382:13918-13937 None:intergenic 40.0%
TCTGCAGAATATTATTGGCC+AGG - tig0027382:14074-14093 Msa1433600:CDS 40.0%
GGTAGTTGGAACATCTGATT+TGG + tig0027382:14160-14179 None:intergenic 40.0%
TAGGCATGTAATGTGGTAGT+TGG + tig0027382:14174-14193 None:intergenic 40.0%
CTTGACATAGGCATGTAATG+TGG + tig0027382:14181-14200 None:intergenic 40.0%
CTAGTAGATGTCTCAACTGA+AGG + tig0027382:14207-14226 None:intergenic 40.0%
TCAGTTGAGACATCTACTAG+TGG - tig0027382:14207-14226 Msa1433600:CDS 40.0%
CTTGATTCACTACTTGTAGC+TGG + tig0027382:14327-14346 None:intergenic 40.0%
GGATCAATTGTGTTCCAACA+AGG - tig0027382:14426-14445 Msa1433600:CDS 40.0%
CAAGCTCATAGTAGTCACTT+TGG + tig0027382:14710-14729 None:intergenic 40.0%
CATGCTGTAGCAAATCTAAC+TGG + tig0027382:14980-14999 None:intergenic 40.0%
AATACACATCTGTAGATCCC+AGG + tig0027382:15049-15068 None:intergenic 40.0%
GTCCAAAATAGATACACACC+AGG - tig0027382:15279-15298 Msa1433600:intron 40.0%
TGAAGTTTCAGAATCACAGC+CGG - tig0027382:15639-15658 Msa1433600:intron 40.0%
GCACGCAATATTCTATTGTC+CGG + tig0027382:15661-15680 None:intergenic 40.0%
ACTGGCTGAATCTTAAGAGT+TGG + tig0027382:15721-15740 None:intergenic 40.0%
! TCAGCCAGTTTTTGTGGATT+TGG - tig0027382:15732-15751 Msa1433600:intron 40.0%
! CAGCCAGTTTTTGTGGATTT+GGG - tig0027382:15733-15752 Msa1433600:intron 40.0%
AAGCCCAAATCCACAAAAAC+TGG + tig0027382:15739-15758 None:intergenic 40.0%
GTAAGAAGTCTGCAAACGAT+AGG - tig0027382:15761-15780 Msa1433600:intron 40.0%
AACGATAGGCAAGCAAACAA+AGG - tig0027382:15775-15794 Msa1433600:intron 40.0%
ATCAGACAAAGGCTTAAGCA+AGG - tig0027382:15804-15823 Msa1433600:intron 40.0%
TCAGACAAAGGCTTAAGCAA+GGG - tig0027382:15805-15824 Msa1433600:intron 40.0%
! AAGAGTGCAGCATGATAGTA+AGG - tig0027382:15849-15868 Msa1433600:intron 40.0%
!! AAATTTTGGCAAGGACCTTC+AGG - tig0027382:15919-15938 Msa1433600:intron 40.0%
TGTCTAAGCCTTGAAATCGT+TGG - tig0027382:16023-16042 Msa1433600:intron 40.0%
ACTTGTAATCGATTGCTTGC+CGG + tig0027382:16255-16274 None:intergenic 40.0%
AATCCACTACTCGAGTAAAC+AGG + tig0027382:12274-12293 None:intergenic 40.0%
! ATTGAAACGGGTTTGGGATT+AGG - tig0027382:12380-12399 Msa1433600:three_prime_UTR 40.0%
AAAGTAGAAAAGGGTAGCGA+GGG + tig0027382:12489-12508 None:intergenic 40.0%
AAAAGTAGAAAAGGGTAGCG+AGG + tig0027382:12490-12509 None:intergenic 40.0%
!!! TCGTAAACCTTTTTGGCTTG+TGG - tig0027382:12749-12768 Msa1433600:CDS 40.0%
!!! CGTAAACCTTTTTGGCTTGT+GGG - tig0027382:12750-12769 Msa1433600:CDS 40.0%
TCAGTTCAATGTTCCCATTC+AGG + tig0027382:12784-12803 None:intergenic 40.0%
ACTGATCACCTGATTAGTGA+TGG - tig0027382:12799-12818 Msa1433600:CDS 40.0%
CATTGACATCAGAATGCCTT+AGG + tig0027382:12877-12896 None:intergenic 40.0%
CTGATGTCAATGTAAGACAG+TGG - tig0027382:12885-12904 Msa1433600:CDS 40.0%
! TATAGTAGTTCTGCGATCTG+AGG - tig0027382:12968-12987 Msa1433600:intron 40.0%
! ATAGTAGTTCTGCGATCTGA+GGG - tig0027382:12969-12988 Msa1433600:intron 40.0%
ATGCTGCAATTAGTGTGTTC+CGG - tig0027382:12992-13011 Msa1433600:intron 40.0%
ACTTGCTTGAGTTCTTCATC+TGG - tig0027382:13128-13147 Msa1433600:intron 40.0%
CAAAGAACAACACGCAAATC+AGG + tig0027382:13172-13191 None:intergenic 40.0%
!! CATCTCGTGTCCTTTAAAAC+AGG + tig0027382:13200-13219 None:intergenic 40.0%
TGGAACTAAGAACCCAAAAC+AGG + tig0027382:13224-13243 None:intergenic 40.0%
!! ATACTTCTGGGATACGTATC+CGG + tig0027382:13484-13503 None:intergenic 40.0%
ATACTTCTGGATACGTATCC+GGG + tig0027382:13568-13587 None:intergenic 40.0%
GATACTTCTGGATACGTATC+CGG + tig0027382:13569-13588 None:intergenic 40.0%
! ATTTAGGATACGATACGGCT+TGG + tig0027382:13918-13937 None:intergenic 40.0%
TCTGCAGAATATTATTGGCC+AGG - tig0027382:14074-14093 Msa1433600:CDS 40.0%
GGTAGTTGGAACATCTGATT+TGG + tig0027382:14160-14179 None:intergenic 40.0%
TAGGCATGTAATGTGGTAGT+TGG + tig0027382:14174-14193 None:intergenic 40.0%
CTTGACATAGGCATGTAATG+TGG + tig0027382:14181-14200 None:intergenic 40.0%
CTAGTAGATGTCTCAACTGA+AGG + tig0027382:14207-14226 None:intergenic 40.0%
TCAGTTGAGACATCTACTAG+TGG - tig0027382:14207-14226 Msa1433600:CDS 40.0%
CTTGATTCACTACTTGTAGC+TGG + tig0027382:14327-14346 None:intergenic 40.0%
GGATCAATTGTGTTCCAACA+AGG - tig0027382:14426-14445 Msa1433600:CDS 40.0%
CAAGCTCATAGTAGTCACTT+TGG + tig0027382:14710-14729 None:intergenic 40.0%
CATGCTGTAGCAAATCTAAC+TGG + tig0027382:14980-14999 None:intergenic 40.0%
AATACACATCTGTAGATCCC+AGG + tig0027382:15049-15068 None:intergenic 40.0%
GTCCAAAATAGATACACACC+AGG - tig0027382:15279-15298 Msa1433600:intron 40.0%
TGAAGTTTCAGAATCACAGC+CGG - tig0027382:15639-15658 Msa1433600:intron 40.0%
GCACGCAATATTCTATTGTC+CGG + tig0027382:15661-15680 None:intergenic 40.0%
ACTGGCTGAATCTTAAGAGT+TGG + tig0027382:15721-15740 None:intergenic 40.0%
! TCAGCCAGTTTTTGTGGATT+TGG - tig0027382:15732-15751 Msa1433600:intron 40.0%
! CAGCCAGTTTTTGTGGATTT+GGG - tig0027382:15733-15752 Msa1433600:intron 40.0%
AAGCCCAAATCCACAAAAAC+TGG + tig0027382:15739-15758 None:intergenic 40.0%
GTAAGAAGTCTGCAAACGAT+AGG - tig0027382:15761-15780 Msa1433600:intron 40.0%
AACGATAGGCAAGCAAACAA+AGG - tig0027382:15775-15794 Msa1433600:intron 40.0%
ATCAGACAAAGGCTTAAGCA+AGG - tig0027382:15804-15823 Msa1433600:intron 40.0%
TCAGACAAAGGCTTAAGCAA+GGG - tig0027382:15805-15824 Msa1433600:intron 40.0%
! AAGAGTGCAGCATGATAGTA+AGG - tig0027382:15849-15868 Msa1433600:intron 40.0%
!! AAATTTTGGCAAGGACCTTC+AGG - tig0027382:15919-15938 Msa1433600:intron 40.0%
TGTCTAAGCCTTGAAATCGT+TGG - tig0027382:16023-16042 Msa1433600:intron 40.0%
ACTTGTAATCGATTGCTTGC+CGG + tig0027382:16255-16274 None:intergenic 40.0%
TTGCCTGTTTACTCGAGTAG+TGG - tig0027382:12268-12287 Msa1433600:three_prime_UTR 45.0%
GAAAGAGAAGATGGAAACGG+CGG - tig0027382:12316-12335 Msa1433600:three_prime_UTR 45.0%
AAAGAGAAGATGGAAACGGC+GGG - tig0027382:12317-12336 Msa1433600:three_prime_UTR 45.0%
GTTGTGCGCGAAGATTGAAA+CGG - tig0027382:12367-12386 Msa1433600:three_prime_UTR 45.0%
TTGTGCGCGAAGATTGAAAC+GGG - tig0027382:12368-12387 Msa1433600:three_prime_UTR 45.0%
! GCGAAGATTGAAACGGGTTT+GGG - tig0027382:12374-12393 Msa1433600:three_prime_UTR 45.0%
! AACGGGTTTGGGATTAGGTT+TGG - tig0027382:12385-12404 Msa1433600:three_prime_UTR 45.0%
AGGTACTCTTTAGCATCTCG+TGG + tig0027382:12458-12477 None:intergenic 45.0%
CAGTTTCCCACAAGCCAAAA+AGG + tig0027382:12759-12778 None:intergenic 45.0%
TGTGGGAAACTGTTCCTGAA+TGG - tig0027382:12767-12786 Msa1433600:CDS 45.0%
GTGGGAAACTGTTCCTGAAT+GGG - tig0027382:12768-12787 Msa1433600:CDS 45.0%
GCAATTAGTGTGTTCCGGAT+TGG - tig0027382:12997-13016 Msa1433600:intron 45.0%
!! TTAGTGTGTTCCGGATTGGT+TGG - tig0027382:13001-13020 Msa1433600:intron 45.0%
!! TGGTACTGATCCAAGCATCA+AGG + tig0027382:13081-13100 None:intergenic 45.0%
TTGAGTTCTTCATCTGGACC+AGG - tig0027382:13134-13153 Msa1433600:intron 45.0%
TCTGGACCAGGATTGTGTTT+AGG - tig0027382:13146-13165 Msa1433600:intron 45.0%
ATCAGGCCTAAACACAATCC+TGG + tig0027382:13155-13174 None:intergenic 45.0%
! GACACGAGATGACCTGTTTT+GGG - tig0027382:13209-13228 Msa1433600:intron 45.0%
TTGTTGCAACCTATGAAGCC+CGG - tig0027382:13393-13412 Msa1433600:intron 45.0%
TATCCGATACGTATCCGACA+CGG + tig0027382:13441-13460 None:intergenic 45.0%
!! TACTTCTGGGATACGTATCC+GGG + tig0027382:13483-13502 None:intergenic 45.0%
GGATACGTTAAGGATACTCC+CGG - tig0027382:13547-13566 Msa1433600:intron 45.0%
CCTGCACTATGATGATACCA+AGG + tig0027382:13697-13716 None:intergenic 45.0%
CCTTGGTATCATCATAGTGC+AGG - tig0027382:13694-13713 Msa1433600:intron 45.0%
GATACGGGTACGATACGATA+TGG + tig0027382:13967-13986 None:intergenic 45.0%
ACCCGTATCCATATCCGTAT+CGG - tig0027382:13978-13997 Msa1433600:CDS 45.0%
TCACAGATTTCCCTACTTCC+TGG + tig0027382:14095-14114 None:intergenic 45.0%
GAAGAATACTTAAGGCGGAG+AGG - tig0027382:14117-14136 Msa1433600:CDS 45.0%
AACTGAAGGTGGCTTGACAT+AGG + tig0027382:14193-14212 None:intergenic 45.0%
GTAGATGTCTCAACTGAAGG+TGG + tig0027382:14204-14223 None:intergenic 45.0%
TGTTTGTGAGCAAGAAGGTG+AGG - tig0027382:14515-14534 Msa1433600:intron 45.0%
GTTTGTGAGCAAGAAGGTGA+GGG - tig0027382:14516-14535 Msa1433600:intron 45.0%
AAGAAGCTGAACGAGCCAAA+CGG - tig0027382:14879-14898 Msa1433600:intron 45.0%
! TTTTGATCTAGTTGGCCGCA+AGG - tig0027382:14919-14938 Msa1433600:intron 45.0%
TATTGCGTGCACCAGATGAA+AGG - tig0027382:15671-15690 Msa1433600:intron 45.0%
ATTGCGTGCACCAGATGAAA+GGG - tig0027382:15672-15691 Msa1433600:intron 45.0%
CAGACAAAGGCTTAAGCAAG+GGG - tig0027382:15806-15825 Msa1433600:intron 45.0%
ACTATCATGCTGCACTCTTC+CGG + tig0027382:15848-15867 None:intergenic 45.0%
AAGGACCTTCAGGAAATGGA+GGG - tig0027382:15929-15948 Msa1433600:intron 45.0%
TTGCCTGTTTACTCGAGTAG+TGG - tig0027382:12268-12287 Msa1433600:three_prime_UTR 45.0%
GAAAGAGAAGATGGAAACGG+CGG - tig0027382:12316-12335 Msa1433600:three_prime_UTR 45.0%
AAAGAGAAGATGGAAACGGC+GGG - tig0027382:12317-12336 Msa1433600:three_prime_UTR 45.0%
GTTGTGCGCGAAGATTGAAA+CGG - tig0027382:12367-12386 Msa1433600:three_prime_UTR 45.0%
TTGTGCGCGAAGATTGAAAC+GGG - tig0027382:12368-12387 Msa1433600:three_prime_UTR 45.0%
! GCGAAGATTGAAACGGGTTT+GGG - tig0027382:12374-12393 Msa1433600:three_prime_UTR 45.0%
! AACGGGTTTGGGATTAGGTT+TGG - tig0027382:12385-12404 Msa1433600:three_prime_UTR 45.0%
AGGTACTCTTTAGCATCTCG+TGG + tig0027382:12458-12477 None:intergenic 45.0%
CAGTTTCCCACAAGCCAAAA+AGG + tig0027382:12759-12778 None:intergenic 45.0%
TGTGGGAAACTGTTCCTGAA+TGG - tig0027382:12767-12786 Msa1433600:CDS 45.0%
GTGGGAAACTGTTCCTGAAT+GGG - tig0027382:12768-12787 Msa1433600:CDS 45.0%
GCAATTAGTGTGTTCCGGAT+TGG - tig0027382:12997-13016 Msa1433600:intron 45.0%
!! TTAGTGTGTTCCGGATTGGT+TGG - tig0027382:13001-13020 Msa1433600:intron 45.0%
!! TGGTACTGATCCAAGCATCA+AGG + tig0027382:13081-13100 None:intergenic 45.0%
TTGAGTTCTTCATCTGGACC+AGG - tig0027382:13134-13153 Msa1433600:intron 45.0%
TCTGGACCAGGATTGTGTTT+AGG - tig0027382:13146-13165 Msa1433600:intron 45.0%
ATCAGGCCTAAACACAATCC+TGG + tig0027382:13155-13174 None:intergenic 45.0%
! GACACGAGATGACCTGTTTT+GGG - tig0027382:13209-13228 Msa1433600:intron 45.0%
TTGTTGCAACCTATGAAGCC+CGG - tig0027382:13393-13412 Msa1433600:intron 45.0%
TATCCGATACGTATCCGACA+CGG + tig0027382:13441-13460 None:intergenic 45.0%
!! TACTTCTGGGATACGTATCC+GGG + tig0027382:13483-13502 None:intergenic 45.0%
GGATACGTTAAGGATACTCC+CGG - tig0027382:13547-13566 Msa1433600:intron 45.0%
CCTGCACTATGATGATACCA+AGG + tig0027382:13697-13716 None:intergenic 45.0%
CCTTGGTATCATCATAGTGC+AGG - tig0027382:13694-13713 Msa1433600:intron 45.0%
GATACGGGTACGATACGATA+TGG + tig0027382:13967-13986 None:intergenic 45.0%
ACCCGTATCCATATCCGTAT+CGG - tig0027382:13978-13997 Msa1433600:CDS 45.0%
TCACAGATTTCCCTACTTCC+TGG + tig0027382:14095-14114 None:intergenic 45.0%
GAAGAATACTTAAGGCGGAG+AGG - tig0027382:14117-14136 Msa1433600:CDS 45.0%
AACTGAAGGTGGCTTGACAT+AGG + tig0027382:14193-14212 None:intergenic 45.0%
GTAGATGTCTCAACTGAAGG+TGG + tig0027382:14204-14223 None:intergenic 45.0%
TGTTTGTGAGCAAGAAGGTG+AGG - tig0027382:14515-14534 Msa1433600:intron 45.0%
GTTTGTGAGCAAGAAGGTGA+GGG - tig0027382:14516-14535 Msa1433600:intron 45.0%
AAGAAGCTGAACGAGCCAAA+CGG - tig0027382:14879-14898 Msa1433600:intron 45.0%
! TTTTGATCTAGTTGGCCGCA+AGG - tig0027382:14919-14938 Msa1433600:intron 45.0%
TATTGCGTGCACCAGATGAA+AGG - tig0027382:15671-15690 Msa1433600:intron 45.0%
ATTGCGTGCACCAGATGAAA+GGG - tig0027382:15672-15691 Msa1433600:intron 45.0%
CAGACAAAGGCTTAAGCAAG+GGG - tig0027382:15806-15825 Msa1433600:intron 45.0%
ACTATCATGCTGCACTCTTC+CGG + tig0027382:15848-15867 None:intergenic 45.0%
AAGGACCTTCAGGAAATGGA+GGG - tig0027382:15929-15948 Msa1433600:intron 45.0%
!! AAAAATTAAATTAAATCATT+CGG + tig0027382:13507-13526 None:intergenic 5.0%
!! AAAAATTAAATTAAATCATT+CGG + tig0027382:13507-13526 None:intergenic 5.0%
AAGAGAAGATGGAAACGGCG+GGG - tig0027382:12318-12337 Msa1433600:three_prime_UTR 50.0%
! CGCGAAGATTGAAACGGGTT+TGG - tig0027382:12373-12392 Msa1433600:three_prime_UTR 50.0%
CGAAGGGTCCATCACTAATC+AGG + tig0027382:12810-12829 None:intergenic 50.0%
TAGGCATCCCTCACATTGGA+GGG + tig0027382:12858-12877 None:intergenic 50.0%
TTAGGCATCCCTCACATTGG+AGG + tig0027382:12859-12878 None:intergenic 50.0%
TCCAATGTGAGGGATGCCTA+AGG - tig0027382:12858-12877 Msa1433600:CDS 50.0%
GACGTCAACTCCAACCAATC+CGG + tig0027382:13014-13033 None:intergenic 50.0%
AAGCGTGTCTCCTTGATGCT+TGG - tig0027382:13068-13087 Msa1433600:intron 50.0%
! GGACACGAGATGACCTGTTT+TGG - tig0027382:13208-13227 Msa1433600:intron 50.0%
GGGCTTCATAGGTTGCAACA+AGG + tig0027382:13394-13413 None:intergenic 50.0%
! TTGGAGTATCCGGGCTTCAT+AGG + tig0027382:13405-13424 None:intergenic 50.0%
GAAGCCCGGATACTCCAAAA+TGG - tig0027382:13407-13426 Msa1433600:intron 50.0%
!!! GGCACCATTTTGGAGTATCC+GGG + tig0027382:13414-13433 None:intergenic 50.0%
!!! CGGCACCATTTTGGAGTATC+CGG + tig0027382:13415-13434 None:intergenic 50.0%
ATACGTATCCGACACGGGTA+CGG + tig0027382:13435-13454 None:intergenic 50.0%
TACCCGTGTCGGATACGTAT+CGG - tig0027382:13435-13454 Msa1433600:intron 50.0%
ATCCGATACGTATCCGACAC+GGG + tig0027382:13440-13459 None:intergenic 50.0%
TATCGGATACCGATACTCCG+CGG - tig0027382:13452-13471 Msa1433600:intron 50.0%
CCCGATACGGATATGGATAC+GGG + tig0027382:13982-14001 None:intergenic 50.0%
CCCGTATCCATATCCGTATC+GGG - tig0027382:13979-13998 Msa1433600:CDS 50.0%
CCCCGATACGGATATGGATA+CGG + tig0027382:13983-14002 None:intergenic 50.0%
CCGTATCCATATCCGTATCG+GGG - tig0027382:13980-13999 Msa1433600:CDS 50.0%
CACTCTTGTTGGGTTCTGCA+TGG + tig0027382:14275-14294 None:intergenic 50.0%
AAGCGCATGGTCTTCCTTGT+TGG + tig0027382:14443-14462 None:intergenic 50.0%
GAGGGACCTTGCAATTTCTG+TGG - tig0027382:14534-14553 Msa1433600:intron 50.0%
! AGGGCACCACAGAAATTGCA+AGG + tig0027382:14543-14562 None:intergenic 50.0%
TGGTGCCCTTGTGTTGAAAG+AGG - tig0027382:14554-14573 Msa1433600:intron 50.0%
GGTGCCCTTGTGTTGAAAGA+GGG - tig0027382:14555-14574 Msa1433600:intron 50.0%
GCTGCCCTCTTTCAACACAA+GGG + tig0027382:14562-14581 None:intergenic 50.0%
AGCTGCCCTCTTTCAACACA+AGG + tig0027382:14563-14582 None:intergenic 50.0%
AAAGAGGGCAGCTCATATGC+TGG - tig0027382:14570-14589 Msa1433600:intron 50.0%
CTGCTGAAGCTTACGCAAAG+AGG - tig0027382:14634-14653 Msa1433600:intron 50.0%
TTGTACGAGCGGCAGCATTT+CGG + tig0027382:14674-14693 None:intergenic 50.0%
CGGTTCACTTCCCTTTCATC+TGG + tig0027382:15685-15704 None:intergenic 50.0%
CTTAAGCAAGGGGTTGTGCT+TGG - tig0027382:15816-15835 Msa1433600:intron 50.0%
GGGTTGTGCTTGGAGATTAC+CGG - tig0027382:15826-15845 Msa1433600:intron 50.0%
TGGCAAGGACCTTCAGGAAA+TGG - tig0027382:15925-15944 Msa1433600:intron 50.0%
CAAGGACCTTCAGGAAATGG+AGG - tig0027382:15928-15947 Msa1433600:intron 50.0%
GGGCTGCATGTTGAAGATGA+TGG - tig0027382:15949-15968 Msa1433600:intron 50.0%
TCCCTTGCCATAGTGTACAC+CGG - tig0027382:16233-16252 Msa1433600:five_prime_UTR 50.0%
TTGCTTGCCGGTGTACACTA+TGG + tig0027382:16243-16262 None:intergenic 50.0%
AAGAGAAGATGGAAACGGCG+GGG - tig0027382:12318-12337 Msa1433600:three_prime_UTR 50.0%
! CGCGAAGATTGAAACGGGTT+TGG - tig0027382:12373-12392 Msa1433600:three_prime_UTR 50.0%
CGAAGGGTCCATCACTAATC+AGG + tig0027382:12810-12829 None:intergenic 50.0%
TAGGCATCCCTCACATTGGA+GGG + tig0027382:12858-12877 None:intergenic 50.0%
TTAGGCATCCCTCACATTGG+AGG + tig0027382:12859-12878 None:intergenic 50.0%
TCCAATGTGAGGGATGCCTA+AGG - tig0027382:12858-12877 Msa1433600:CDS 50.0%
GACGTCAACTCCAACCAATC+CGG + tig0027382:13014-13033 None:intergenic 50.0%
AAGCGTGTCTCCTTGATGCT+TGG - tig0027382:13068-13087 Msa1433600:intron 50.0%
! GGACACGAGATGACCTGTTT+TGG - tig0027382:13208-13227 Msa1433600:intron 50.0%
GGGCTTCATAGGTTGCAACA+AGG + tig0027382:13394-13413 None:intergenic 50.0%
! TTGGAGTATCCGGGCTTCAT+AGG + tig0027382:13405-13424 None:intergenic 50.0%
GAAGCCCGGATACTCCAAAA+TGG - tig0027382:13407-13426 Msa1433600:intron 50.0%
!!! GGCACCATTTTGGAGTATCC+GGG + tig0027382:13414-13433 None:intergenic 50.0%
!!! CGGCACCATTTTGGAGTATC+CGG + tig0027382:13415-13434 None:intergenic 50.0%
ATACGTATCCGACACGGGTA+CGG + tig0027382:13435-13454 None:intergenic 50.0%
TACCCGTGTCGGATACGTAT+CGG - tig0027382:13435-13454 Msa1433600:intron 50.0%
ATCCGATACGTATCCGACAC+GGG + tig0027382:13440-13459 None:intergenic 50.0%
TATCGGATACCGATACTCCG+CGG - tig0027382:13452-13471 Msa1433600:intron 50.0%
CCCGATACGGATATGGATAC+GGG + tig0027382:13982-14001 None:intergenic 50.0%
CCCGTATCCATATCCGTATC+GGG - tig0027382:13979-13998 Msa1433600:CDS 50.0%
CCCCGATACGGATATGGATA+CGG + tig0027382:13983-14002 None:intergenic 50.0%
CCGTATCCATATCCGTATCG+GGG - tig0027382:13980-13999 Msa1433600:CDS 50.0%
CACTCTTGTTGGGTTCTGCA+TGG + tig0027382:14275-14294 None:intergenic 50.0%
AAGCGCATGGTCTTCCTTGT+TGG + tig0027382:14443-14462 None:intergenic 50.0%
GAGGGACCTTGCAATTTCTG+TGG - tig0027382:14534-14553 Msa1433600:intron 50.0%
! AGGGCACCACAGAAATTGCA+AGG + tig0027382:14543-14562 None:intergenic 50.0%
TGGTGCCCTTGTGTTGAAAG+AGG - tig0027382:14554-14573 Msa1433600:intron 50.0%
GGTGCCCTTGTGTTGAAAGA+GGG - tig0027382:14555-14574 Msa1433600:intron 50.0%
GCTGCCCTCTTTCAACACAA+GGG + tig0027382:14562-14581 None:intergenic 50.0%
AGCTGCCCTCTTTCAACACA+AGG + tig0027382:14563-14582 None:intergenic 50.0%
AAAGAGGGCAGCTCATATGC+TGG - tig0027382:14570-14589 Msa1433600:intron 50.0%
CTGCTGAAGCTTACGCAAAG+AGG - tig0027382:14634-14653 Msa1433600:intron 50.0%
TTGTACGAGCGGCAGCATTT+CGG + tig0027382:14674-14693 None:intergenic 50.0%
CGGTTCACTTCCCTTTCATC+TGG + tig0027382:15685-15704 None:intergenic 50.0%
CTTAAGCAAGGGGTTGTGCT+TGG - tig0027382:15816-15835 Msa1433600:intron 50.0%
GGGTTGTGCTTGGAGATTAC+CGG - tig0027382:15826-15845 Msa1433600:intron 50.0%
TGGCAAGGACCTTCAGGAAA+TGG - tig0027382:15925-15944 Msa1433600:intron 50.0%
CAAGGACCTTCAGGAAATGG+AGG - tig0027382:15928-15947 Msa1433600:intron 50.0%
GGGCTGCATGTTGAAGATGA+TGG - tig0027382:15949-15968 Msa1433600:intron 50.0%
TCCCTTGCCATAGTGTACAC+CGG - tig0027382:16233-16252 Msa1433600:five_prime_UTR 50.0%
TTGCTTGCCGGTGTACACTA+TGG + tig0027382:16243-16262 None:intergenic 50.0%
GGGTAGCGAGGGTTACATCA+AGG + tig0027382:12478-12497 None:intergenic 55.0%
!! GTGATGGACCCTTCGTCCTT+AGG - tig0027382:12815-12834 Msa1433600:CDS 55.0%
CAAGCGCACCTAAGGACGAA+GGG + tig0027382:12826-12845 None:intergenic 55.0%
ACAAGCGCACCTAAGGACGA+AGG + tig0027382:12827-12846 None:intergenic 55.0%
AGGCATCCCTCACATTGGAG+GGG + tig0027382:12857-12876 None:intergenic 55.0%
GCCTTAGGCATCCCTCACAT+TGG + tig0027382:12862-12881 None:intergenic 55.0%
! ACACGGGTACGGCACCATTT+TGG + tig0027382:13424-13443 None:intergenic 55.0%
!! AAATGGTGCCGTACCCGTGT+CGG - tig0027382:13424-13443 Msa1433600:intron 55.0%
!! TACGTATCCGGGAGTATCCG+CGG + tig0027382:13472-13491 None:intergenic 55.0%
ACGAAGCCCCGATACGGATA+TGG + tig0027382:13989-14008 None:intergenic 55.0%
TATCCGTATCGGGGCTTCGT+AGG - tig0027382:13989-14008 Msa1433600:CDS 55.0%
CAACCTACGAAGCCCCGATA+CGG + tig0027382:13995-14014 None:intergenic 55.0%
! CCACGGACAGTCACCGTTTT+CGG + tig0027382:14249-14268 None:intergenic 55.0%
TGGGTTCTGCATGGTCACCA+CGG + tig0027382:14266-14285 None:intergenic 55.0%
!! GAACCCAACAAGAGTGCTGC+CGG - tig0027382:14279-14298 Msa1433600:CDS 55.0%
CTTCCGGCAGCACTCTTGTT+GGG + tig0027382:14285-14304 None:intergenic 55.0%
ACTTCCGGCAGCACTCTTGT+TGG + tig0027382:14286-14305 None:intergenic 55.0%
AGTGCTGCCGGAAGTAGTCA+GGG - tig0027382:14291-14310 Msa1433600:CDS 55.0%
CCCACTTCCCTGACTACTTC+CGG + tig0027382:14301-14320 None:intergenic 55.0%
CCGGAAGTAGTCAGGGAAGT+GGG - tig0027382:14298-14317 Msa1433600:CDS 55.0%
! TCACTTGCTGAGGCAGCCAA+AGG - tig0027382:14405-14424 Msa1433600:CDS 55.0%
GCCTCCATTGTCAGAGACTG+AGG - tig0027382:14608-14627 Msa1433600:intron 55.0%
GCCTCAGTCTCTGACAATGG+AGG + tig0027382:14612-14631 None:intergenic 55.0%
GCAGCCTCAGTCTCTGACAA+TGG + tig0027382:14615-14634 None:intergenic 55.0%
TGCAGCCCTCCATTTCCTGA+AGG + tig0027382:15937-15956 None:intergenic 55.0%
GCCGGTGTACACTATGGCAA+GGG + tig0027382:16237-16256 None:intergenic 55.0%
TGCCGGTGTACACTATGGCA+AGG + tig0027382:16238-16257 None:intergenic 55.0%
GGGTAGCGAGGGTTACATCA+AGG + tig0027382:12478-12497 None:intergenic 55.0%
!! GTGATGGACCCTTCGTCCTT+AGG - tig0027382:12815-12834 Msa1433600:CDS 55.0%
CAAGCGCACCTAAGGACGAA+GGG + tig0027382:12826-12845 None:intergenic 55.0%
ACAAGCGCACCTAAGGACGA+AGG + tig0027382:12827-12846 None:intergenic 55.0%
AGGCATCCCTCACATTGGAG+GGG + tig0027382:12857-12876 None:intergenic 55.0%
GCCTTAGGCATCCCTCACAT+TGG + tig0027382:12862-12881 None:intergenic 55.0%
! ACACGGGTACGGCACCATTT+TGG + tig0027382:13424-13443 None:intergenic 55.0%
!! AAATGGTGCCGTACCCGTGT+CGG - tig0027382:13424-13443 Msa1433600:intron 55.0%
!! TACGTATCCGGGAGTATCCG+CGG + tig0027382:13472-13491 None:intergenic 55.0%
ACGAAGCCCCGATACGGATA+TGG + tig0027382:13989-14008 None:intergenic 55.0%
TATCCGTATCGGGGCTTCGT+AGG - tig0027382:13989-14008 Msa1433600:CDS 55.0%
CAACCTACGAAGCCCCGATA+CGG + tig0027382:13995-14014 None:intergenic 55.0%
! CCACGGACAGTCACCGTTTT+CGG + tig0027382:14249-14268 None:intergenic 55.0%
TGGGTTCTGCATGGTCACCA+CGG + tig0027382:14266-14285 None:intergenic 55.0%
!! GAACCCAACAAGAGTGCTGC+CGG - tig0027382:14279-14298 Msa1433600:CDS 55.0%
CTTCCGGCAGCACTCTTGTT+GGG + tig0027382:14285-14304 None:intergenic 55.0%
ACTTCCGGCAGCACTCTTGT+TGG + tig0027382:14286-14305 None:intergenic 55.0%
AGTGCTGCCGGAAGTAGTCA+GGG - tig0027382:14291-14310 Msa1433600:CDS 55.0%
CCCACTTCCCTGACTACTTC+CGG + tig0027382:14301-14320 None:intergenic 55.0%
CCGGAAGTAGTCAGGGAAGT+GGG - tig0027382:14298-14317 Msa1433600:CDS 55.0%
! TCACTTGCTGAGGCAGCCAA+AGG - tig0027382:14405-14424 Msa1433600:CDS 55.0%
GCCTCCATTGTCAGAGACTG+AGG - tig0027382:14608-14627 Msa1433600:intron 55.0%
GCCTCAGTCTCTGACAATGG+AGG + tig0027382:14612-14631 None:intergenic 55.0%
GCAGCCTCAGTCTCTGACAA+TGG + tig0027382:14615-14634 None:intergenic 55.0%
TGCAGCCCTCCATTTCCTGA+AGG + tig0027382:15937-15956 None:intergenic 55.0%
GCCGGTGTACACTATGGCAA+GGG + tig0027382:16237-16256 None:intergenic 55.0%
TGCCGGTGTACACTATGGCA+AGG + tig0027382:16238-16257 None:intergenic 55.0%
CAGCAGCACAAGCGCACCTA+AGG + tig0027382:12834-12853 None:intergenic 60.0%
CTGCTGCCCCTCCAATGTGA+GGG - tig0027382:12848-12867 Msa1433600:CDS 60.0%
!! CGGGAGTATCCGCGGAGTAT+CGG + tig0027382:13464-13483 None:intergenic 60.0%
CGATACTCCGCGGATACTCC+CGG - tig0027382:13462-13481 Msa1433600:intron 60.0%
CCGAAAACGGTGACTGTCCG+TGG - tig0027382:14246-14265 Msa1433600:CDS 60.0%
! GAGTGCTGCCGGAAGTAGTC+AGG - tig0027382:14290-14309 Msa1433600:CDS 60.0%
GCCGGAAGTAGTCAGGGAAG+TGG - tig0027382:14297-14316 Msa1433600:CDS 60.0%
GGGCAGCTCATATGCTGGTC+TGG - tig0027382:14575-14594 Msa1433600:intron 60.0%
CAGCAGCACAAGCGCACCTA+AGG + tig0027382:12834-12853 None:intergenic 60.0%
CTGCTGCCCCTCCAATGTGA+GGG - tig0027382:12848-12867 Msa1433600:CDS 60.0%
!! CGGGAGTATCCGCGGAGTAT+CGG + tig0027382:13464-13483 None:intergenic 60.0%
CGATACTCCGCGGATACTCC+CGG - tig0027382:13462-13481 Msa1433600:intron 60.0%
CCGAAAACGGTGACTGTCCG+TGG - tig0027382:14246-14265 Msa1433600:CDS 60.0%
! GAGTGCTGCCGGAAGTAGTC+AGG - tig0027382:14290-14309 Msa1433600:CDS 60.0%
GCCGGAAGTAGTCAGGGAAG+TGG - tig0027382:14297-14316 Msa1433600:CDS 60.0%
GGGCAGCTCATATGCTGGTC+TGG - tig0027382:14575-14594 Msa1433600:intron 60.0%
AGATGGAAACGGCGGGGCAG+TGG - tig0027382:12324-12343 Msa1433600:three_prime_UTR 65.0%
! GCAGTGGCTGGAGAAGGCGT+TGG - tig0027382:12340-12359 Msa1433600:three_prime_UTR 65.0%
!! GTGGCTGGAGAAGGCGTTGG+TGG - tig0027382:12343-12362 Msa1433600:three_prime_UTR 65.0%
GCTGCTGCCCCTCCAATGTG+AGG - tig0027382:12847-12866 Msa1433600:CDS 65.0%
CGACGCGCTTGACAAGCGCA+TGG + tig0027382:14456-14475 None:intergenic 65.0%
AGATGGAAACGGCGGGGCAG+TGG - tig0027382:12324-12343 Msa1433600:three_prime_UTR 65.0%
! GCAGTGGCTGGAGAAGGCGT+TGG - tig0027382:12340-12359 Msa1433600:three_prime_UTR 65.0%
!! GTGGCTGGAGAAGGCGTTGG+TGG - tig0027382:12343-12362 Msa1433600:three_prime_UTR 65.0%
GCTGCTGCCCCTCCAATGTG+AGG - tig0027382:12847-12866 Msa1433600:CDS 65.0%
CGACGCGCTTGACAAGCGCA+TGG + tig0027382:14456-14475 None:intergenic 65.0%
GGAAACGGCGGGGCAGTGGC+TGG - tig0027382:12328-12347 Msa1433600:three_prime_UTR 75.0%
GGCGGGGCAGTGGCTGGAGA+AGG - tig0027382:12334-12353 Msa1433600:three_prime_UTR 75.0%
GGAAACGGCGGGGCAGTGGC+TGG - tig0027382:12328-12347 Msa1433600:three_prime_UTR 75.0%
GGCGGGGCAGTGGCTGGAGA+AGG - tig0027382:12334-12353 Msa1433600:three_prime_UTR 75.0%
Chromosome Type Strat End Strand Name
tig0027382 gene 12224 16305 12224 ID=Msa1433600;Name=Msa1433600
tig0027382 mRNA 12224 16305 12224 ID=Msa1433600-mRNA-1;Parent=Msa1433600;Name=Msa1433600-mRNA-1;_AED=0.12;_eAED=0.12;_QI=102|1|1|1|1|1|4|312|433
tig0027382 exon 12224 12907 12224 ID=Msa1433600-mRNA-1:exon:8737;Parent=Msa1433600-mRNA-1
tig0027382 exon 13589 13687 13589 ID=Msa1433600-mRNA-1:exon:8736;Parent=Msa1433600-mRNA-1
tig0027382 exon 13774 14448 13774 ID=Msa1433600-mRNA-1:exon:8735;Parent=Msa1433600-mRNA-1
tig0027382 exon 16048 16305 16048 ID=Msa1433600-mRNA-1:exon:8734;Parent=Msa1433600-mRNA-1
tig0027382 five_prime_UTR 16204 16305 16204 ID=Msa1433600-mRNA-1:five_prime_utr;Parent=Msa1433600-mRNA-1
tig0027382 CDS 16048 16203 16048 ID=Msa1433600-mRNA-1:cds;Parent=Msa1433600-mRNA-1
tig0027382 CDS 13774 14448 13774 ID=Msa1433600-mRNA-1:cds;Parent=Msa1433600-mRNA-1
tig0027382 CDS 13589 13687 13589 ID=Msa1433600-mRNA-1:cds;Parent=Msa1433600-mRNA-1
tig0027382 CDS 12536 12907 12536 ID=Msa1433600-mRNA-1:cds;Parent=Msa1433600-mRNA-1
tig0027382 three_prime_UTR 12224 12535 12224 ID=Msa1433600-mRNA-1:three_prime_utr;Parent=Msa1433600-mRNA-1
Gene Sequence

>Msa1433600

ATGGAAACGGCGGGGCAGTGGCTGGAGAAGGCGTTGGTGGAGTTGTGCGCGAAGATTGAAACGGGTTTGGGATTAGGTTTGGATGAAGAGATCATAAAAGGGCTTGTTTCTTACTGTGATCTTGCTCAGCCACGAGATGCTAAAGAGTACCTTGATAATATTATTGGCCAGGAAGTAGGGAAATCTGTGATTGAAGAATACTTAAGGCGGAGAGGTCACTCAGAATTCAGCACCAAATCAGATGTTCCAACTACCACATTACATGCCTATGTCAAGCCACCTTCAGTTGAGACATCTACTAGTGGATCTAAGAAAAGAACGCCGAAAACGGTGACTGTCCGTGGTGACCATGCAGAACCCAACAAGAGTGCTGCCGGAAGTAGTCAGGGAAGTGGGATTCCAGCTACAAGTAGTGAATCAAGAACATCACAAATAGTAAATCAAGTGACTTCCAAAAAGAAGAAAGCTGGGAAAACTATTTCACTTGCTGAGGCAGCCAAAGGATCAATTGTGTTCCAACAAGGAAGACCATGCGCTTGTCAAGCGCGTCGTCACAACCTAGTCAGTAATTGTTTATCTTGTGGTAAAATTGTTTGTGAGCAAGAAGGTGAGGGACCTTGCAATTTCTGTGGTGCCCTTGTGTTGAAAGAGGGCAGCTCATATGCTGGTCTGGAAGAAAGCTTGCCTCCATTGTCAGAGACTGAGGCTGCTGCTGAAGCTTACGCAAAGAGGCTTGTCGACTATGACCGAAATGCTGCCGCTCGTACAACAGTTATTGATGACCAAAGTGACTACTATGAGCTTGATTCAAATACTTGGTTGTCAAAGGAGGAGAAAGACTTGTTGAAAAAGAAACAAGAGGAGATGGAAGAAGCTGAACGAGCCAAACGGAATAAAGTTGTTGTGACTTTTGATCTAGTTGGCCGCAAGGTTCTTCTGAATCAAGATGAAGTTTCAGAATCACAGCCGGACAATAGAATATTGCGTGCACCAGATGAAAGGGAAGTGAACCGTATTATACCAAATCCAACTCTTAAGATTCAGCCAGTTTTTGTGGATTTGGGCTTCAGTAAGAAGTCTGCAAACGATAGGCAAGCAAACAAAGGTAAGCAATCAGACAAAGGCTTAAGCAAGGGGTTGTGCTTGGAGATTACCGGAAGAGTGCAGCATGATAGTAAGGACTTGAAGTACCTTCAGCAAAGTCAATTTGCAACAGATTCAAATGAAAAATTTTGGCAAGGACCTTCAGGAAATGGAGGGCTGCATGTTGAAGATGATGGTGAATGTTTACTGGACATATGA
Protein sequence

>Msa1433600

METAGQWLEKALVELCAKIETGLGLGLDEEIIKGLVSYCDLAQPRDAKEYLDNIIGQEVGKSVIEEYLRRRGHSEFSTKSDVPTTTLHAYVKPPSVETSTSGSKKRTPKTVTVRGDHAEPNKSAAGSSQGSGIPATSSESRTSQIVNQVTSKKKKAGKTISLAEAAKGSIVFQQGRPCACQARRHNLVSNCLSCGKIVCEQEGEGPCNFCGALVLKEGSSYAGLEESLPPLSETEAAAEAYAKRLVDYDRNAAARTTVIDDQSDYYELDSNTWLSKEEKDLLKKKQEEMEEAERAKRNKVVVTFDLVGRKVLLNQDEVSESQPDNRILRAPDEREVNRIIPNPTLKIQPVFVDLGFSKKSANDRQANKGKQSDKGLSKGLCLEITGRVQHDSKDLKYLQQSQFATDSNEKFWQGPSGNGGLHVEDDGECLLDI*