Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0523810 | XP_003603940.1 | 96.629 | 178 | 6 | 0 | 1 | 178 | 1 | 178 | 3.55e-124 | 357 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0523810 | B7FMY9 | 96.629 | 178 | 6 | 0 | 1 | 178 | 1 | 178 | 1.69e-124 | 357 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0007850 | Msa0523810 | 0.808851 | 2.527750e-50 | -8.615850e-47 |
| Msa0009300 | Msa0523810 | 0.806174 | 9.351495e-50 | -8.615850e-47 |
| Msa0068020 | Msa0523810 | 0.839194 | 1.833478e-57 | -8.615850e-47 |
| Msa0076580 | Msa0523810 | 0.835729 | 1.416297e-56 | -8.615850e-47 |
| Msa0113130 | Msa0523810 | 0.814220 | 1.721338e-51 | -8.615850e-47 |
| Msa0113240 | Msa0523810 | 0.846366 | 2.271833e-59 | -8.615850e-47 |
| Msa0126840 | Msa0523810 | 0.809661 | 1.694773e-50 | -8.615850e-47 |
| Msa0155320 | Msa0523810 | 0.802896 | 4.512558e-49 | -8.615850e-47 |
| Msa0166750 | Msa0523810 | 0.803489 | 3.401423e-49 | -8.615850e-47 |
| Msa0171940 | Msa0523810 | 0.813535 | 2.437059e-51 | -8.615850e-47 |
| Msa0177960 | Msa0523810 | 0.824386 | 8.300482e-54 | -8.615850e-47 |
| Msa0408240 | Msa0523810 | -0.807549 | 4.788534e-50 | -8.615850e-47 |
| Msa0427860 | Msa0523810 | -0.824430 | 8.104653e-54 | -8.615850e-47 |
| Msa0443390 | Msa0523810 | 0.806638 | 7.463804e-50 | -8.615850e-47 |
| Msa0474090 | Msa0523810 | -0.819922 | 9.006436e-53 | -8.615850e-47 |
| Msa0245580 | Msa0523810 | 0.819744 | 9.888783e-53 | -8.615850e-47 |
| Msa0296250 | Msa0523810 | 0.801240 | 9.884691e-49 | -8.615850e-47 |
| Msa0296790 | Msa0523810 | 0.800426 | 1.449034e-48 | -8.615850e-47 |
| Msa0296920 | Msa0523810 | 0.807652 | 4.552770e-50 | -8.615850e-47 |
| Msa0304660 | Msa0523810 | 0.809554 | 1.786943e-50 | -8.615850e-47 |
| Msa0331700 | Msa0523810 | 0.810791 | 9.671831e-51 | -8.615850e-47 |
| Msa0523500 | Msa0523810 | 0.810104 | 1.360541e-50 | -8.615850e-47 |
| Msa0523810 | Msa0534750 | 0.840922 | 6.494593e-58 | -8.615850e-47 |
| Msa0523810 | Msa0540550 | 0.818973 | 1.482175e-52 | -8.615850e-47 |
| Msa0523810 | Msa0550540 | 0.803779 | 2.961832e-49 | -8.615850e-47 |
| Msa0523810 | Msa0593700 | 0.813740 | 2.196277e-51 | -8.615850e-47 |
| Msa0523810 | Msa0603570 | 0.853203 | 2.791212e-61 | -8.615850e-47 |
| Msa0523810 | Msa0615580 | 0.817968 | 2.503796e-52 | -8.615850e-47 |
| Msa0523810 | Msa0633570 | 0.815920 | 7.218159e-52 | -8.615850e-47 |
| Msa0523810 | Msa0672100 | 0.800090 | 1.696336e-48 | -8.615850e-47 |
| Msa0523810 | Msa0683780 | 0.810346 | 1.206617e-50 | -8.615850e-47 |
| Msa0523810 | Msa0699190 | 0.801715 | 7.902052e-49 | -8.615850e-47 |
| Msa0523810 | Msa0870750 | 0.801049 | 1.081600e-48 | -8.615850e-47 |
| Msa0523810 | Msa0913240 | 0.860117 | 2.582483e-63 | -8.615850e-47 |
| Msa0523810 | Msa0944200 | 0.804780 | 1.832513e-49 | -8.615850e-47 |
| Msa0523810 | Msa0992550 | 0.819917 | 9.030360e-53 | -8.615850e-47 |
| Msa0523810 | Msa1025940 | 0.822433 | 2.375676e-53 | -8.615850e-47 |
| Msa0523810 | Msa1027070 | 0.839528 | 1.501882e-57 | -8.615850e-47 |
| Msa0523810 | Msa1131560 | 0.831487 | 1.623362e-55 | -8.615850e-47 |
| Msa0523810 | Msa1165780 | 0.827252 | 1.733924e-54 | -8.615850e-47 |
| Msa0523810 | Msa1166870 | 0.810781 | 9.715555e-51 | -8.615850e-47 |
| Msa0523810 | Msa1179980 | 0.802306 | 5.973057e-49 | -8.615850e-47 |
| Msa0523810 | Msa1205850 | 0.818564 | 1.835472e-52 | -8.615850e-47 |
| Msa0523810 | Msa1208020 | 0.809640 | 1.712073e-50 | -8.615850e-47 |
| Msa0523810 | Msa1270620 | 0.812712 | 3.692330e-51 | -8.615850e-47 |
| Msa0523810 | Msa1270690 | 0.806444 | 8.201353e-50 | -8.615850e-47 |
| Msa0523810 | Msa1331250 | 0.820739 | 5.849310e-53 | -8.615850e-47 |
| Msa0523810 | Msa1365800 | 0.803744 | 3.012546e-49 | -8.615850e-47 |
| Msa0523810 | Msa1368530 | 0.802519 | 5.397455e-49 | -8.615850e-47 |
| Msa0523810 | Msa1458090 | 0.801899 | 7.242866e-49 | -8.615850e-47 |
| Msa0523810 | Msa1459960 | 0.815650 | 8.290582e-52 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0523810 | MtrunA17_Chr3g0144691 | 96.629 | 178 | 6 | 0 | 1 | 178 | 1 | 178 | 3.26e-128 | 357 |
| Msa0523810 | MtrunA17_Chr1g0176311 | 26.437 | 174 | 94 | 5 | 32 | 171 | 12 | 185 | 3.34e-11 | 59.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0523810 | AT2G21620.1 | 76.404 | 178 | 41 | 1 | 1 | 178 | 1 | 177 | 7.95e-93 | 268 |
| Msa0523810 | AT2G21620.2 | 73.913 | 184 | 41 | 2 | 1 | 178 | 1 | 183 | 3.39e-90 | 262 |
Find 54 sgRNAs with CRISPR-Local
Find 251 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CACCTTGTTCATGCTGTTTC+TGG | 0.024473 | 3_4:+77254361 | Msa0523810:CDS |
| CTCTACTCAAAATTTATTAA+AGG | 0.159462 | 3_4:-77254062 | None:intergenic |
| TGAATTTCCAAACATGAAAA+TGG | 0.188960 | 3_4:-77255774 | None:intergenic |
| TAAACCTGCAGCTGTGGTTT+TGG | 0.252116 | 3_4:+77255333 | Msa0523810:CDS |
| ATCAATGGTCTAATGGATTT+AGG | 0.280276 | 3_4:+77255676 | Msa0523810:exon |
| TTCTTGAATGTAACATTGTT+TGG | 0.326541 | 3_4:+77255840 | Msa0523810:three_prime_UTR |
| AAGTGAAGATTGTAAATTAA+TGG | 0.331046 | 3_4:+77254129 | Msa0523810:exon |
| GCACCTGTTGTGATCGTTCC+TGG | 0.338638 | 3_4:+77255554 | Msa0523810:CDS |
| TCAAAAGCATGTTTACTGTT+TGG | 0.339328 | 3_4:-77254298 | None:intergenic |
| CCAGAGCTTGAGAGGGAAAC+AGG | 0.363491 | 3_4:+77254229 | Msa0523810:CDS |
| AGCTCTGGCTCAGGCACTAT+TGG | 0.369995 | 3_4:-77254214 | None:intergenic |
| GAGAAACAACACAGCGCAAT+AGG | 0.380672 | 3_4:-77255973 | None:intergenic |
| ACTGTTTGGACCATGATCTA+TGG | 0.408420 | 3_4:-77254284 | None:intergenic |
| TTGAAACAAGCTTCTGCCTC+TGG | 0.408871 | 3_4:-77255359 | None:intergenic |
| GTGATGCATCAATGGTCTAA+TGG | 0.411227 | 3_4:+77255669 | Msa0523810:CDS |
| CCTGTTTCCCTCTCAAGCTC+TGG | 0.412478 | 3_4:-77254229 | None:intergenic |
| CGACTTAACCCAGGGATTGA+TGG | 0.429955 | 3_4:+77254552 | Msa0523810:CDS |
| CTAATTTCTCCATCAATCCC+TGG | 0.431733 | 3_4:-77254561 | None:intergenic |
| ACAATCTTCACTTCACAACT+TGG | 0.437242 | 3_4:-77254119 | None:intergenic |
| TCCCTCTCAAGCTCTGGCTC+AGG | 0.455326 | 3_4:-77254223 | None:intergenic |
| TTTCCAGGAACGATCACAAC+AGG | 0.474556 | 3_4:-77255557 | None:intergenic |
| CAGGAGAAAGAAGAAGAGGA+AGG | 0.480520 | 3_4:+77254248 | Msa0523810:CDS |
| GAATTTCCAAACATGAAAAT+GGG | 0.481633 | 3_4:-77255773 | None:intergenic |
| GAGGCAGAAGCTTGTTTCAA+AGG | 0.482260 | 3_4:+77255362 | Msa0523810:CDS |
| GAAACAGGAGAAAGAAGAAG+AGG | 0.483483 | 3_4:+77254244 | Msa0523810:CDS |
| CGGATAGTGCAAGGTGATGC+AGG | 0.488351 | 3_4:+77255280 | Msa0523810:CDS |
| TTTCATGTTTGGAAATTCAT+GGG | 0.492429 | 3_4:+77255778 | Msa0523810:three_prime_UTR |
| GTCCCCAAAACCACAGCTGC+AGG | 0.501479 | 3_4:-77255337 | None:intergenic |
| GTATCTAACTTCGTATGTTG+TGG | 0.502757 | 3_4:+77255739 | Msa0523810:three_prime_UTR |
| GTTGTGATCGTTCCTGGAAA+AGG | 0.523884 | 3_4:+77255560 | Msa0523810:CDS |
| TCCTTCTTCAGTGTGCTACA+AGG | 0.530640 | 3_4:+77255494 | Msa0523810:intron |
| AGGAGAAAGAAGAAGAGGAA+GGG | 0.532412 | 3_4:+77254249 | Msa0523810:CDS |
| TAAATTAATGGAGACAGTGA+TGG | 0.533156 | 3_4:+77254141 | Msa0523810:exon |
| TAATTTCTCCATCAATCCCT+GGG | 0.538350 | 3_4:-77254560 | None:intergenic |
| TGCCTGAGCCAGAGCTTGAG+AGG | 0.541192 | 3_4:+77254221 | Msa0523810:CDS |
| AGATGCTGGTGATGCATCAA+TGG | 0.543889 | 3_4:+77255661 | Msa0523810:intron |
| ATAGTATTAGCCATAGATCA+TGG | 0.553466 | 3_4:+77254274 | Msa0523810:CDS |
| AACAGGTGAAAACAGTAGCT+CGG | 0.557174 | 3_4:+77255260 | Msa0523810:intron |
| GGCACTATTGGTATCAGAGA+AGG | 0.564937 | 3_4:-77254202 | None:intergenic |
| GAGGATTAAACCTGCAGCTG+TGG | 0.569878 | 3_4:+77255327 | Msa0523810:CDS |
| GATGGAGAAATTAGCGGCTG+AGG | 0.575246 | 3_4:+77254570 | Msa0523810:CDS |
| GGGATTGATGGAGAAATTAG+CGG | 0.601178 | 3_4:+77254564 | Msa0523810:CDS |
| AACCAGAAACAGCATGAACA+AGG | 0.607545 | 3_4:-77254363 | None:intergenic |
| GCCTGAGCCAGAGCTTGAGA+GGG | 0.610344 | 3_4:+77254222 | Msa0523810:CDS |
| TGCAGGAAAAGTAATTTGCA+AGG | 0.617105 | 3_4:+77255297 | Msa0523810:CDS |
| AACAGCATGAACAAGGTGGA+TGG | 0.627059 | 3_4:-77254356 | None:intergenic |
| ACAGTAGCTCGGATAGTGCA+AGG | 0.631985 | 3_4:+77255271 | Msa0523810:CDS |
| AAACAAACTACTATGCCAGA+AGG | 0.637457 | 3_4:-77255906 | None:intergenic |
| ATTGTGTACGACTTAACCCA+GGG | 0.659770 | 3_4:+77254544 | Msa0523810:CDS |
| AATTGTGTACGACTTAACCC+AGG | 0.666749 | 3_4:+77254543 | Msa0523810:CDS |
| CAGAAACAGCATGAACAAGG+TGG | 0.686182 | 3_4:-77254360 | None:intergenic |
| CAACAGGTGCTGCTTTACAG+TGG | 0.687014 | 3_4:-77255541 | None:intergenic |
| AGTGTGCTACAAGGAAGCGT+CGG | 0.687872 | 3_4:+77255503 | Msa0523810:intron |
| TAATTTGCAAGGAAGCAGAG+AGG | 0.695628 | 3_4:+77255308 | Msa0523810:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTAATTAAAAGTTTTCTTTT+TGG | - | chr3_4:77254009-77254028 | None:intergenic | 10.0% |
| !! | AAAACTTCAATTAATTTATA+TGG | - | chr3_4:77254446-77254465 | None:intergenic | 10.0% |
| !!! | GATTTTTTTTTATTACTTTA+TGG | + | chr3_4:77254476-77254495 | Msa0523810:intron | 10.0% |
| !!! | TTATTGTGAATTTATTTTTT+TGG | + | chr3_4:77255144-77255163 | Msa0523810:intron | 10.0% |
| !!! | TTAATTAAAAGTTTTCTTTT+TGG | - | chr3_4:77254009-77254028 | None:intergenic | 10.0% |
| !! | AAAACTTCAATTAATTTATA+TGG | - | chr3_4:77254446-77254465 | None:intergenic | 10.0% |
| !!! | GATTTTTTTTTATTACTTTA+TGG | + | chr3_4:77254476-77254495 | Msa0523810:intron | 10.0% |
| !!! | TTATTGTGAATTTATTTTTT+TGG | + | chr3_4:77255144-77255163 | Msa0523810:intron | 10.0% |
| !!! | AATTGAAGTTTTTGTTTTTA+TGG | + | chr3_4:77254454-77254473 | Msa0523810:intron | 15.0% |
| !! | TCCAATTTGAAAAATTATAT+AGG | + | chr3_4:77254646-77254665 | Msa0523810:intron | 15.0% |
| !!! | TCCTATATAATTTTTCAAAT+TGG | - | chr3_4:77254650-77254669 | None:intergenic | 15.0% |
| !!! | TATTACAAGTTGATTTTATA+CGG | - | chr3_4:77254980-77254999 | None:intergenic | 15.0% |
| !!! | AAAACTTATTCTTTTTCAAT+GGG | + | chr3_4:77255031-77255050 | Msa0523810:intron | 15.0% |
| !! | AAAAAACATATACAGAATAA+TGG | - | chr3_4:77255473-77255492 | None:intergenic | 15.0% |
| !!! | AATTGAAGTTTTTGTTTTTA+TGG | + | chr3_4:77254454-77254473 | Msa0523810:intron | 15.0% |
| !! | TCCAATTTGAAAAATTATAT+AGG | + | chr3_4:77254646-77254665 | Msa0523810:intron | 15.0% |
| !!! | TCCTATATAATTTTTCAAAT+TGG | - | chr3_4:77254650-77254669 | None:intergenic | 15.0% |
| !!! | TATTACAAGTTGATTTTATA+CGG | - | chr3_4:77254980-77254999 | None:intergenic | 15.0% |
| !!! | AAAACTTATTCTTTTTCAAT+GGG | + | chr3_4:77255031-77255050 | Msa0523810:intron | 15.0% |
| !! | AAAAAACATATACAGAATAA+TGG | - | chr3_4:77255473-77255492 | None:intergenic | 15.0% |
| !!! | TTAAAAGTTTTCTTTTTGGT+TGG | - | chr3_4:77254005-77254024 | None:intergenic | 20.0% |
| !! | CTCTACTCAAAATTTATTAA+AGG | - | chr3_4:77254065-77254084 | None:intergenic | 20.0% |
| !! | AAGTGAAGATTGTAAATTAA+TGG | + | chr3_4:77254129-77254148 | Msa0523810:exon | 20.0% |
| !! | TTCATAAGTAAATAGGAAAA+CGG | - | chr3_4:77254625-77254644 | None:intergenic | 20.0% |
| !! | ATCACATGTAAAAAAAACAA+TGG | + | chr3_4:77254780-77254799 | Msa0523810:intron | 20.0% |
| !! | TCACATGTAAAAAAAACAAT+GGG | + | chr3_4:77254781-77254800 | Msa0523810:intron | 20.0% |
| !! | GCATATCTTGAAATATTTAA+TGG | + | chr3_4:77254829-77254848 | Msa0523810:intron | 20.0% |
| !! | TATCTTGAAATATTTAATGG+AGG | + | chr3_4:77254832-77254851 | Msa0523810:intron | 20.0% |
| !! | TAAAATCAACTTGTAATACA+AGG | + | chr3_4:77254982-77255001 | Msa0523810:intron | 20.0% |
| !!! | CAAAACTTATTCTTTTTCAA+TGG | + | chr3_4:77255030-77255049 | Msa0523810:intron | 20.0% |
| !!! | TTAAAAGTTTTCTTTTTGGT+TGG | - | chr3_4:77254005-77254024 | None:intergenic | 20.0% |
| !! | CTCTACTCAAAATTTATTAA+AGG | - | chr3_4:77254065-77254084 | None:intergenic | 20.0% |
| !! | AAGTGAAGATTGTAAATTAA+TGG | + | chr3_4:77254129-77254148 | Msa0523810:exon | 20.0% |
| !! | TTCATAAGTAAATAGGAAAA+CGG | - | chr3_4:77254625-77254644 | None:intergenic | 20.0% |
| !! | ATCACATGTAAAAAAAACAA+TGG | + | chr3_4:77254780-77254799 | Msa0523810:intron | 20.0% |
| !! | TCACATGTAAAAAAAACAAT+GGG | + | chr3_4:77254781-77254800 | Msa0523810:intron | 20.0% |
| !! | GCATATCTTGAAATATTTAA+TGG | + | chr3_4:77254829-77254848 | Msa0523810:intron | 20.0% |
| !! | TATCTTGAAATATTTAATGG+AGG | + | chr3_4:77254832-77254851 | Msa0523810:intron | 20.0% |
| !! | TAAAATCAACTTGTAATACA+AGG | + | chr3_4:77254982-77255001 | Msa0523810:intron | 20.0% |
| !!! | CAAAACTTATTCTTTTTCAA+TGG | + | chr3_4:77255030-77255049 | Msa0523810:intron | 20.0% |
| ! | ATTGGACTTCATAAGTAAAT+AGG | - | chr3_4:77254632-77254651 | None:intergenic | 25.0% |
| ! | ACAAATTGTGGTTAATGATT+TGG | - | chr3_4:77254723-77254742 | None:intergenic | 25.0% |
| ! | CACATGTAAAAAAAACAATG+GGG | + | chr3_4:77254782-77254801 | Msa0523810:intron | 25.0% |
| ! | TCAATAGCATAATTAAGTCA+AGG | + | chr3_4:77254806-77254825 | Msa0523810:intron | 25.0% |
| ! | CAATAGCATAATTAAGTCAA+GGG | + | chr3_4:77254807-77254826 | Msa0523810:intron | 25.0% |
| ! | AAAAGTTTAATCAACCATCA+TGG | + | chr3_4:77254888-77254907 | Msa0523810:intron | 25.0% |
| ! | GGGATTATTAATACATGTAA+AGG | - | chr3_4:77255068-77255087 | None:intergenic | 25.0% |
| ! | TAATGAGTGATAAACAATAG+AGG | - | chr3_4:77255174-77255193 | None:intergenic | 25.0% |
| ! | CATACTAATCATAAGTAGAA+TGG | - | chr3_4:77255233-77255252 | None:intergenic | 25.0% |
| ! | GAATTTCCAAACATGAAAAT+GGG | - | chr3_4:77255776-77255795 | None:intergenic | 25.0% |
| ! | TGAATTTCCAAACATGAAAA+TGG | - | chr3_4:77255777-77255796 | None:intergenic | 25.0% |
| !! | TTTTCATGTTTGGAAATTCA+TGG | + | chr3_4:77255777-77255796 | Msa0523810:three_prime_UTR | 25.0% |
| ! | TTTCATGTTTGGAAATTCAT+GGG | + | chr3_4:77255778-77255797 | Msa0523810:three_prime_UTR | 25.0% |
| ! | TTCTTGAATGTAACATTGTT+TGG | + | chr3_4:77255840-77255859 | Msa0523810:three_prime_UTR | 25.0% |
| ! | ATTGGACTTCATAAGTAAAT+AGG | - | chr3_4:77254632-77254651 | None:intergenic | 25.0% |
| ! | ACAAATTGTGGTTAATGATT+TGG | - | chr3_4:77254723-77254742 | None:intergenic | 25.0% |
| ! | CACATGTAAAAAAAACAATG+GGG | + | chr3_4:77254782-77254801 | Msa0523810:intron | 25.0% |
| ! | TCAATAGCATAATTAAGTCA+AGG | + | chr3_4:77254806-77254825 | Msa0523810:intron | 25.0% |
| ! | CAATAGCATAATTAAGTCAA+GGG | + | chr3_4:77254807-77254826 | Msa0523810:intron | 25.0% |
| ! | AAAAGTTTAATCAACCATCA+TGG | + | chr3_4:77254888-77254907 | Msa0523810:intron | 25.0% |
| ! | GGGATTATTAATACATGTAA+AGG | - | chr3_4:77255068-77255087 | None:intergenic | 25.0% |
| ! | TAATGAGTGATAAACAATAG+AGG | - | chr3_4:77255174-77255193 | None:intergenic | 25.0% |
| ! | CATACTAATCATAAGTAGAA+TGG | - | chr3_4:77255233-77255252 | None:intergenic | 25.0% |
| ! | GAATTTCCAAACATGAAAAT+GGG | - | chr3_4:77255776-77255795 | None:intergenic | 25.0% |
| ! | TGAATTTCCAAACATGAAAA+TGG | - | chr3_4:77255777-77255796 | None:intergenic | 25.0% |
| !! | TTTTCATGTTTGGAAATTCA+TGG | + | chr3_4:77255777-77255796 | Msa0523810:three_prime_UTR | 25.0% |
| ! | TTTCATGTTTGGAAATTCAT+GGG | + | chr3_4:77255778-77255797 | Msa0523810:three_prime_UTR | 25.0% |
| ! | TTCTTGAATGTAACATTGTT+TGG | + | chr3_4:77255840-77255859 | Msa0523810:three_prime_UTR | 25.0% |
| !!! | AAAGTTTTCTTTTTGGTTGG+TGG | - | chr3_4:77254002-77254021 | None:intergenic | 30.0% |
| TAAATTAATGGAGACAGTGA+TGG | + | chr3_4:77254141-77254160 | Msa0523810:exon | 30.0% | |
| ATAGTATTAGCCATAGATCA+TGG | + | chr3_4:77254274-77254293 | Msa0523810:CDS | 30.0% | |
| ! | TCAAAAGCATGTTTACTGTT+TGG | - | chr3_4:77254301-77254320 | None:intergenic | 30.0% |
| ! | ACAGTAAACATGCTTTTGAT+TGG | + | chr3_4:77254302-77254321 | Msa0523810:CDS | 30.0% |
| !! | CAGTAAACATGCTTTTGATT+GGG | + | chr3_4:77254303-77254322 | Msa0523810:CDS | 30.0% |
| ATGAGAAGTTAAGAAAGTGA+AGG | - | chr3_4:77254397-77254416 | None:intergenic | 30.0% | |
| GAGGTCAAAGATACTAATTA+CGG | + | chr3_4:77254851-77254870 | Msa0523810:intron | 30.0% | |
| !! | ATACTAATTACGGTGGATTA+GGG | + | chr3_4:77254861-77254880 | Msa0523810:intron | 30.0% |
| GTTATCAATAAATGCTGCAA+GGG | - | chr3_4:77255088-77255107 | None:intergenic | 30.0% | |
| AGTTATCAATAAATGCTGCA+AGG | - | chr3_4:77255089-77255108 | None:intergenic | 30.0% | |
| ! | GCAGCATTTATTGATAACTT+TGG | + | chr3_4:77255090-77255109 | Msa0523810:intron | 30.0% |
| GATTAGTATGATGTGAAAAC+AGG | + | chr3_4:77255243-77255262 | Msa0523810:intron | 30.0% | |
| TTCAATCCCTTTCTATATCT+CGG | + | chr3_4:77255423-77255442 | Msa0523810:intron | 30.0% | |
| !! | ATCAATGGTCTAATGGATTT+AGG | + | chr3_4:77255676-77255695 | Msa0523810:exon | 30.0% |
| ! | AATGCTTTTATGTAACCTTC+TGG | + | chr3_4:77255891-77255910 | Msa0523810:three_prime_UTR | 30.0% |
| !!! | AAAGTTTTCTTTTTGGTTGG+TGG | - | chr3_4:77254002-77254021 | None:intergenic | 30.0% |
| TAAATTAATGGAGACAGTGA+TGG | + | chr3_4:77254141-77254160 | Msa0523810:exon | 30.0% | |
| ATAGTATTAGCCATAGATCA+TGG | + | chr3_4:77254274-77254293 | Msa0523810:CDS | 30.0% | |
| ! | TCAAAAGCATGTTTACTGTT+TGG | - | chr3_4:77254301-77254320 | None:intergenic | 30.0% |
| ! | ACAGTAAACATGCTTTTGAT+TGG | + | chr3_4:77254302-77254321 | Msa0523810:CDS | 30.0% |
| !! | CAGTAAACATGCTTTTGATT+GGG | + | chr3_4:77254303-77254322 | Msa0523810:CDS | 30.0% |
| ATGAGAAGTTAAGAAAGTGA+AGG | - | chr3_4:77254397-77254416 | None:intergenic | 30.0% | |
| GAGGTCAAAGATACTAATTA+CGG | + | chr3_4:77254851-77254870 | Msa0523810:intron | 30.0% | |
| !! | ATACTAATTACGGTGGATTA+GGG | + | chr3_4:77254861-77254880 | Msa0523810:intron | 30.0% |
| GTTATCAATAAATGCTGCAA+GGG | - | chr3_4:77255088-77255107 | None:intergenic | 30.0% | |
| AGTTATCAATAAATGCTGCA+AGG | - | chr3_4:77255089-77255108 | None:intergenic | 30.0% | |
| ! | GCAGCATTTATTGATAACTT+TGG | + | chr3_4:77255090-77255109 | Msa0523810:intron | 30.0% |
| GATTAGTATGATGTGAAAAC+AGG | + | chr3_4:77255243-77255262 | Msa0523810:intron | 30.0% | |
| TTCAATCCCTTTCTATATCT+CGG | + | chr3_4:77255423-77255442 | Msa0523810:intron | 30.0% | |
| !! | ATCAATGGTCTAATGGATTT+AGG | + | chr3_4:77255676-77255695 | Msa0523810:exon | 30.0% |
| ! | AATGCTTTTATGTAACCTTC+TGG | + | chr3_4:77255891-77255910 | Msa0523810:three_prime_UTR | 30.0% |
| ACAATCTTCACTTCACAACT+TGG | - | chr3_4:77254122-77254141 | None:intergenic | 35.0% | |
| TAATTTCTCCATCAATCCCT+GGG | - | chr3_4:77254563-77254582 | None:intergenic | 35.0% | |
| GTCAAAGATACTAATTACGG+TGG | + | chr3_4:77254854-77254873 | Msa0523810:intron | 35.0% | |
| ! | GATACTAATTACGGTGGATT+AGG | + | chr3_4:77254860-77254879 | Msa0523810:intron | 35.0% |
| !!! | TTCTTTTTCAATGGGAGACT+TGG | + | chr3_4:77255039-77255058 | Msa0523810:intron | 35.0% |
| CTCATTACTACTCTATTTCC+TGG | + | chr3_4:77255187-77255206 | Msa0523810:intron | 35.0% | |
| TACTCTATTTCCTGGCAAAT+TGG | + | chr3_4:77255195-77255214 | Msa0523810:intron | 35.0% | |
| ! | TGCAGGAAAAGTAATTTGCA+AGG | + | chr3_4:77255297-77255316 | Msa0523810:CDS | 35.0% |
| GTATCTAACTTCGTATGTTG+TGG | + | chr3_4:77255739-77255758 | Msa0523810:three_prime_UTR | 35.0% | |
| ! | TTTCGACCCATTTTCATGTT+TGG | + | chr3_4:77255767-77255786 | Msa0523810:three_prime_UTR | 35.0% |
| AAACAAACTACTATGCCAGA+AGG | - | chr3_4:77255909-77255928 | None:intergenic | 35.0% | |
| ACAATCTTCACTTCACAACT+TGG | - | chr3_4:77254122-77254141 | None:intergenic | 35.0% | |
| TAATTTCTCCATCAATCCCT+GGG | - | chr3_4:77254563-77254582 | None:intergenic | 35.0% | |
| GTCAAAGATACTAATTACGG+TGG | + | chr3_4:77254854-77254873 | Msa0523810:intron | 35.0% | |
| ! | GATACTAATTACGGTGGATT+AGG | + | chr3_4:77254860-77254879 | Msa0523810:intron | 35.0% |
| !!! | TTCTTTTTCAATGGGAGACT+TGG | + | chr3_4:77255039-77255058 | Msa0523810:intron | 35.0% |
| CTCATTACTACTCTATTTCC+TGG | + | chr3_4:77255187-77255206 | Msa0523810:intron | 35.0% | |
| TACTCTATTTCCTGGCAAAT+TGG | + | chr3_4:77255195-77255214 | Msa0523810:intron | 35.0% | |
| ! | TGCAGGAAAAGTAATTTGCA+AGG | + | chr3_4:77255297-77255316 | Msa0523810:CDS | 35.0% |
| GTATCTAACTTCGTATGTTG+TGG | + | chr3_4:77255739-77255758 | Msa0523810:three_prime_UTR | 35.0% | |
| ! | TTTCGACCCATTTTCATGTT+TGG | + | chr3_4:77255767-77255786 | Msa0523810:three_prime_UTR | 35.0% |
| AAACAAACTACTATGCCAGA+AGG | - | chr3_4:77255909-77255928 | None:intergenic | 35.0% | |
| GAAACAGGAGAAAGAAGAAG+AGG | + | chr3_4:77254244-77254263 | Msa0523810:CDS | 40.0% | |
| AGGAGAAAGAAGAAGAGGAA+GGG | + | chr3_4:77254249-77254268 | Msa0523810:CDS | 40.0% | |
| ACTGTTTGGACCATGATCTA+TGG | - | chr3_4:77254287-77254306 | None:intergenic | 40.0% | |
| AACCAGAAACAGCATGAACA+AGG | - | chr3_4:77254366-77254385 | None:intergenic | 40.0% | |
| !! | TTGTTCATGCTGTTTCTGGT+TGG | + | chr3_4:77254365-77254384 | Msa0523810:intron | 40.0% |
| AATTGTGTACGACTTAACCC+AGG | + | chr3_4:77254543-77254562 | Msa0523810:CDS | 40.0% | |
| ATTGTGTACGACTTAACCCA+GGG | + | chr3_4:77254544-77254563 | Msa0523810:CDS | 40.0% | |
| CTAATTTCTCCATCAATCCC+TGG | - | chr3_4:77254564-77254583 | None:intergenic | 40.0% | |
| GGGATTGATGGAGAAATTAG+CGG | + | chr3_4:77254564-77254583 | Msa0523810:CDS | 40.0% | |
| !!! | TGAGGCTTTTGAAGTTGCAA+TGG | + | chr3_4:77254588-77254607 | Msa0523810:CDS | 40.0% |
| CACAATTTGTGTCCCATTCA+CGG | + | chr3_4:77254733-77254752 | Msa0523810:intron | 40.0% | |
| AAATGGACAACTCCGTGAAT+GGG | - | chr3_4:77254748-77254767 | None:intergenic | 40.0% | |
| TAAATGGACAACTCCGTGAA+TGG | - | chr3_4:77254749-77254768 | None:intergenic | 40.0% | |
| ATTCACGGAGTTGTCCATTT+AGG | + | chr3_4:77254748-77254767 | Msa0523810:intron | 40.0% | |
| GTGATTGACTACCACCTAAA+TGG | - | chr3_4:77254765-77254784 | None:intergenic | 40.0% | |
| GAACAACTTGTAAGCCATGA+TGG | - | chr3_4:77254905-77254924 | None:intergenic | 40.0% | |
| GAATAGATTGCCAATTTGCC+AGG | - | chr3_4:77255208-77255227 | None:intergenic | 40.0% | |
| AACAGGTGAAAACAGTAGCT+CGG | + | chr3_4:77255260-77255279 | Msa0523810:intron | 40.0% | |
| ! | TAATTTGCAAGGAAGCAGAG+AGG | + | chr3_4:77255308-77255327 | Msa0523810:CDS | 40.0% |
| GAATGGCCGAGATATAGAAA+GGG | - | chr3_4:77255432-77255451 | None:intergenic | 40.0% | |
| AGAATGGCCGAGATATAGAA+AGG | - | chr3_4:77255433-77255452 | None:intergenic | 40.0% | |
| TAACTGCAGTGTGTAGAGAA+TGG | - | chr3_4:77255449-77255468 | None:intergenic | 40.0% | |
| ! | TAGTAATGCACACCTTTTCC+AGG | - | chr3_4:77255575-77255594 | None:intergenic | 40.0% |
| CTTCTTTGATTGACAGATGC+TGG | + | chr3_4:77255647-77255666 | Msa0523810:intron | 40.0% | |
| GTGATGCATCAATGGTCTAA+TGG | + | chr3_4:77255669-77255688 | Msa0523810:CDS | 40.0% | |
| GAAACAGGAGAAAGAAGAAG+AGG | + | chr3_4:77254244-77254263 | Msa0523810:CDS | 40.0% | |
| AGGAGAAAGAAGAAGAGGAA+GGG | + | chr3_4:77254249-77254268 | Msa0523810:CDS | 40.0% | |
| ACTGTTTGGACCATGATCTA+TGG | - | chr3_4:77254287-77254306 | None:intergenic | 40.0% | |
| AACCAGAAACAGCATGAACA+AGG | - | chr3_4:77254366-77254385 | None:intergenic | 40.0% | |
| !! | TTGTTCATGCTGTTTCTGGT+TGG | + | chr3_4:77254365-77254384 | Msa0523810:intron | 40.0% |
| AATTGTGTACGACTTAACCC+AGG | + | chr3_4:77254543-77254562 | Msa0523810:CDS | 40.0% | |
| ATTGTGTACGACTTAACCCA+GGG | + | chr3_4:77254544-77254563 | Msa0523810:CDS | 40.0% | |
| CTAATTTCTCCATCAATCCC+TGG | - | chr3_4:77254564-77254583 | None:intergenic | 40.0% | |
| GGGATTGATGGAGAAATTAG+CGG | + | chr3_4:77254564-77254583 | Msa0523810:CDS | 40.0% | |
| !!! | TGAGGCTTTTGAAGTTGCAA+TGG | + | chr3_4:77254588-77254607 | Msa0523810:CDS | 40.0% |
| CACAATTTGTGTCCCATTCA+CGG | + | chr3_4:77254733-77254752 | Msa0523810:intron | 40.0% | |
| AAATGGACAACTCCGTGAAT+GGG | - | chr3_4:77254748-77254767 | None:intergenic | 40.0% | |
| TAAATGGACAACTCCGTGAA+TGG | - | chr3_4:77254749-77254768 | None:intergenic | 40.0% | |
| ATTCACGGAGTTGTCCATTT+AGG | + | chr3_4:77254748-77254767 | Msa0523810:intron | 40.0% | |
| GTGATTGACTACCACCTAAA+TGG | - | chr3_4:77254765-77254784 | None:intergenic | 40.0% | |
| GAACAACTTGTAAGCCATGA+TGG | - | chr3_4:77254905-77254924 | None:intergenic | 40.0% | |
| GAATAGATTGCCAATTTGCC+AGG | - | chr3_4:77255208-77255227 | None:intergenic | 40.0% | |
| AACAGGTGAAAACAGTAGCT+CGG | + | chr3_4:77255260-77255279 | Msa0523810:intron | 40.0% | |
| ! | TAATTTGCAAGGAAGCAGAG+AGG | + | chr3_4:77255308-77255327 | Msa0523810:CDS | 40.0% |
| GAATGGCCGAGATATAGAAA+GGG | - | chr3_4:77255432-77255451 | None:intergenic | 40.0% | |
| AGAATGGCCGAGATATAGAA+AGG | - | chr3_4:77255433-77255452 | None:intergenic | 40.0% | |
| TAACTGCAGTGTGTAGAGAA+TGG | - | chr3_4:77255449-77255468 | None:intergenic | 40.0% | |
| ! | TAGTAATGCACACCTTTTCC+AGG | - | chr3_4:77255575-77255594 | None:intergenic | 40.0% |
| CTTCTTTGATTGACAGATGC+TGG | + | chr3_4:77255647-77255666 | Msa0523810:intron | 40.0% | |
| GTGATGCATCAATGGTCTAA+TGG | + | chr3_4:77255669-77255688 | Msa0523810:CDS | 40.0% | |
| GGCACTATTGGTATCAGAGA+AGG | - | chr3_4:77254205-77254224 | None:intergenic | 45.0% | |
| CAGGAGAAAGAAGAAGAGGA+AGG | + | chr3_4:77254248-77254267 | Msa0523810:CDS | 45.0% | |
| AACAGCATGAACAAGGTGGA+TGG | - | chr3_4:77254359-77254378 | None:intergenic | 45.0% | |
| CAGAAACAGCATGAACAAGG+TGG | - | chr3_4:77254363-77254382 | None:intergenic | 45.0% | |
| !! | CACCTTGTTCATGCTGTTTC+TGG | + | chr3_4:77254361-77254380 | Msa0523810:CDS | 45.0% |
| !! | TCATGCTGTTTCTGGTTGGT+TGG | + | chr3_4:77254369-77254388 | Msa0523810:intron | 45.0% |
| CGTGAATGGGACACAAATTG+TGG | - | chr3_4:77254735-77254754 | None:intergenic | 45.0% | |
| ! | TAAACCTGCAGCTGTGGTTT+TGG | + | chr3_4:77255333-77255352 | Msa0523810:CDS | 45.0% |
| ! | AAACCTGCAGCTGTGGTTTT+GGG | + | chr3_4:77255334-77255353 | Msa0523810:CDS | 45.0% |
| TTGAAACAAGCTTCTGCCTC+TGG | - | chr3_4:77255362-77255381 | None:intergenic | 45.0% | |
| ! | GAGGCAGAAGCTTGTTTCAA+AGG | + | chr3_4:77255362-77255381 | Msa0523810:CDS | 45.0% |
| TCCTTCTTCAGTGTGCTACA+AGG | + | chr3_4:77255494-77255513 | Msa0523810:intron | 45.0% | |
| TCCTTGTAGCACACTGAAGA+AGG | - | chr3_4:77255498-77255517 | None:intergenic | 45.0% | |
| TTTCCAGGAACGATCACAAC+AGG | - | chr3_4:77255560-77255579 | None:intergenic | 45.0% | |
| GTTGTGATCGTTCCTGGAAA+AGG | + | chr3_4:77255560-77255579 | Msa0523810:CDS | 45.0% | |
| ! | AGATGCTGGTGATGCATCAA+TGG | + | chr3_4:77255661-77255680 | Msa0523810:intron | 45.0% |
| GAGAAACAACACAGCGCAAT+AGG | - | chr3_4:77255976-77255995 | None:intergenic | 45.0% | |
| GGCACTATTGGTATCAGAGA+AGG | - | chr3_4:77254205-77254224 | None:intergenic | 45.0% | |
| CAGGAGAAAGAAGAAGAGGA+AGG | + | chr3_4:77254248-77254267 | Msa0523810:CDS | 45.0% | |
| AACAGCATGAACAAGGTGGA+TGG | - | chr3_4:77254359-77254378 | None:intergenic | 45.0% | |
| CAGAAACAGCATGAACAAGG+TGG | - | chr3_4:77254363-77254382 | None:intergenic | 45.0% | |
| !! | CACCTTGTTCATGCTGTTTC+TGG | + | chr3_4:77254361-77254380 | Msa0523810:CDS | 45.0% |
| !! | TCATGCTGTTTCTGGTTGGT+TGG | + | chr3_4:77254369-77254388 | Msa0523810:intron | 45.0% |
| CGTGAATGGGACACAAATTG+TGG | - | chr3_4:77254735-77254754 | None:intergenic | 45.0% | |
| ! | TAAACCTGCAGCTGTGGTTT+TGG | + | chr3_4:77255333-77255352 | Msa0523810:CDS | 45.0% |
| ! | AAACCTGCAGCTGTGGTTTT+GGG | + | chr3_4:77255334-77255353 | Msa0523810:CDS | 45.0% |
| TTGAAACAAGCTTCTGCCTC+TGG | - | chr3_4:77255362-77255381 | None:intergenic | 45.0% | |
| ! | GAGGCAGAAGCTTGTTTCAA+AGG | + | chr3_4:77255362-77255381 | Msa0523810:CDS | 45.0% |
| TCCTTCTTCAGTGTGCTACA+AGG | + | chr3_4:77255494-77255513 | Msa0523810:intron | 45.0% | |
| TCCTTGTAGCACACTGAAGA+AGG | - | chr3_4:77255498-77255517 | None:intergenic | 45.0% | |
| TTTCCAGGAACGATCACAAC+AGG | - | chr3_4:77255560-77255579 | None:intergenic | 45.0% | |
| GTTGTGATCGTTCCTGGAAA+AGG | + | chr3_4:77255560-77255579 | Msa0523810:CDS | 45.0% | |
| ! | AGATGCTGGTGATGCATCAA+TGG | + | chr3_4:77255661-77255680 | Msa0523810:intron | 45.0% |
| GAGAAACAACACAGCGCAAT+AGG | - | chr3_4:77255976-77255995 | None:intergenic | 45.0% | |
| !! | AAAAAAAATAAAAATAAACA+TGG | + | chr3_4:77254695-77254714 | Msa0523810:intron | 5.0% |
| !! | AAAAAAAATAAAAATAAACA+TGG | + | chr3_4:77254695-77254714 | Msa0523810:intron | 5.0% |
| CGACTTAACCCAGGGATTGA+TGG | + | chr3_4:77254552-77254571 | Msa0523810:CDS | 50.0% | |
| GATGGAGAAATTAGCGGCTG+AGG | + | chr3_4:77254570-77254589 | Msa0523810:CDS | 50.0% | |
| CACGGAGTTGTCCATTTAGG+TGG | + | chr3_4:77254751-77254770 | Msa0523810:intron | 50.0% | |
| ACAGTAGCTCGGATAGTGCA+AGG | + | chr3_4:77255271-77255290 | Msa0523810:CDS | 50.0% | |
| GAGGATTAAACCTGCAGCTG+TGG | + | chr3_4:77255327-77255346 | Msa0523810:CDS | 50.0% | |
| !! | AACCTGCAGCTGTGGTTTTG+GGG | + | chr3_4:77255335-77255354 | Msa0523810:CDS | 50.0% |
| GTGAGCGTGTGTGTGTGTAT+GGG | + | chr3_4:77255384-77255403 | Msa0523810:intron | 50.0% | |
| ! | AGTGTGCTACAAGGAAGCGT+CGG | + | chr3_4:77255503-77255522 | Msa0523810:intron | 50.0% |
| !! | CAACAGGTGCTGCTTTACAG+TGG | - | chr3_4:77255544-77255563 | None:intergenic | 50.0% |
| GACTGAGCATGAGAACCGAA+CGG | - | chr3_4:77253962-77253981 | None:intergenic | 50.0% | |
| CGACTTAACCCAGGGATTGA+TGG | + | chr3_4:77254552-77254571 | Msa0523810:CDS | 50.0% | |
| GATGGAGAAATTAGCGGCTG+AGG | + | chr3_4:77254570-77254589 | Msa0523810:CDS | 50.0% | |
| CACGGAGTTGTCCATTTAGG+TGG | + | chr3_4:77254751-77254770 | Msa0523810:intron | 50.0% | |
| ACAGTAGCTCGGATAGTGCA+AGG | + | chr3_4:77255271-77255290 | Msa0523810:CDS | 50.0% | |
| GAGGATTAAACCTGCAGCTG+TGG | + | chr3_4:77255327-77255346 | Msa0523810:CDS | 50.0% | |
| !! | AACCTGCAGCTGTGGTTTTG+GGG | + | chr3_4:77255335-77255354 | Msa0523810:CDS | 50.0% |
| GTGAGCGTGTGTGTGTGTAT+GGG | + | chr3_4:77255384-77255403 | Msa0523810:intron | 50.0% | |
| ! | AGTGTGCTACAAGGAAGCGT+CGG | + | chr3_4:77255503-77255522 | Msa0523810:intron | 50.0% |
| !! | CAACAGGTGCTGCTTTACAG+TGG | - | chr3_4:77255544-77255563 | None:intergenic | 50.0% |
| ! | GGTGGCACGCTGTCTTTTCT+AGG | - | chr3_4:77253984-77254003 | None:intergenic | 55.0% |
| ! | AGCTCTGGCTCAGGCACTAT+TGG | - | chr3_4:77254217-77254236 | None:intergenic | 55.0% |
| CCTGTTTCCCTCTCAAGCTC+TGG | - | chr3_4:77254232-77254251 | None:intergenic | 55.0% | |
| CCAGAGCTTGAGAGGGAAAC+AGG | + | chr3_4:77254229-77254248 | Msa0523810:CDS | 55.0% | |
| CGGATAGTGCAAGGTGATGC+AGG | + | chr3_4:77255280-77255299 | Msa0523810:CDS | 55.0% | |
| GGTGAGCGTGTGTGTGTGTA+TGG | + | chr3_4:77255383-77255402 | Msa0523810:intron | 55.0% | |
| GCACCTGTTGTGATCGTTCC+TGG | + | chr3_4:77255554-77255573 | Msa0523810:CDS | 55.0% | |
| ! | GGTGGCACGCTGTCTTTTCT+AGG | - | chr3_4:77253984-77254003 | None:intergenic | 55.0% |
| ! | AGCTCTGGCTCAGGCACTAT+TGG | - | chr3_4:77254217-77254236 | None:intergenic | 55.0% |
| CCTGTTTCCCTCTCAAGCTC+TGG | - | chr3_4:77254232-77254251 | None:intergenic | 55.0% | |
| CCAGAGCTTGAGAGGGAAAC+AGG | + | chr3_4:77254229-77254248 | Msa0523810:CDS | 55.0% | |
| CGGATAGTGCAAGGTGATGC+AGG | + | chr3_4:77255280-77255299 | Msa0523810:CDS | 55.0% | |
| GGTGAGCGTGTGTGTGTGTA+TGG | + | chr3_4:77255383-77255402 | Msa0523810:intron | 55.0% | |
| GCACCTGTTGTGATCGTTCC+TGG | + | chr3_4:77255554-77255573 | Msa0523810:CDS | 55.0% | |
| TGCCTGAGCCAGAGCTTGAG+AGG | + | chr3_4:77254221-77254240 | Msa0523810:CDS | 60.0% | |
| GCCTGAGCCAGAGCTTGAGA+GGG | + | chr3_4:77254222-77254241 | Msa0523810:CDS | 60.0% | |
| ! | TCCCTCTCAAGCTCTGGCTC+AGG | - | chr3_4:77254226-77254245 | None:intergenic | 60.0% |
| GTCCCCAAAACCACAGCTGC+AGG | - | chr3_4:77255340-77255359 | None:intergenic | 60.0% | |
| !!! | GCTGTGGTTTTGGGGACCAG+AGG | + | chr3_4:77255343-77255362 | Msa0523810:CDS | 60.0% |
| TGCCTGAGCCAGAGCTTGAG+AGG | + | chr3_4:77254221-77254240 | Msa0523810:CDS | 60.0% | |
| GCCTGAGCCAGAGCTTGAGA+GGG | + | chr3_4:77254222-77254241 | Msa0523810:CDS | 60.0% | |
| ! | TCCCTCTCAAGCTCTGGCTC+AGG | - | chr3_4:77254226-77254245 | None:intergenic | 60.0% |
| GTCCCCAAAACCACAGCTGC+AGG | - | chr3_4:77255340-77255359 | None:intergenic | 60.0% | |
| !!! | GCTGTGGTTTTGGGGACCAG+AGG | + | chr3_4:77255343-77255362 | Msa0523810:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_4 | gene | 77253962 | 77256030 | 77253962 | ID=Msa0523810;Name=Msa0523810 |
| chr3_4 | mRNA | 77253962 | 77256030 | 77253962 | ID=Msa0523810-mRNA-1;Parent=Msa0523810;Name=Msa0523810-mRNA-1;_AED=0.07;_eAED=0.07;_QI=186|1|1|1|1|1|5|342|178 |
| chr3_4 | exon | 77253962 | 77254382 | 77253962 | ID=Msa0523810-mRNA-1:exon:22562;Parent=Msa0523810-mRNA-1 |
| chr3_4 | exon | 77254530 | 77254609 | 77254530 | ID=Msa0523810-mRNA-1:exon:22563;Parent=Msa0523810-mRNA-1 |
| chr3_4 | exon | 77255265 | 77255383 | 77255265 | ID=Msa0523810-mRNA-1:exon:22564;Parent=Msa0523810-mRNA-1 |
| chr3_4 | exon | 77255505 | 77255581 | 77255505 | ID=Msa0523810-mRNA-1:exon:22565;Parent=Msa0523810-mRNA-1 |
| chr3_4 | exon | 77255663 | 77256030 | 77255663 | ID=Msa0523810-mRNA-1:exon:22566;Parent=Msa0523810-mRNA-1 |
| chr3_4 | five_prime_UTR | 77253962 | 77254147 | 77253962 | ID=Msa0523810-mRNA-1:five_prime_utr;Parent=Msa0523810-mRNA-1 |
| chr3_4 | CDS | 77254148 | 77254382 | 77254148 | ID=Msa0523810-mRNA-1:cds;Parent=Msa0523810-mRNA-1 |
| chr3_4 | CDS | 77254530 | 77254609 | 77254530 | ID=Msa0523810-mRNA-1:cds;Parent=Msa0523810-mRNA-1 |
| chr3_4 | CDS | 77255265 | 77255383 | 77255265 | ID=Msa0523810-mRNA-1:cds;Parent=Msa0523810-mRNA-1 |
| chr3_4 | CDS | 77255505 | 77255581 | 77255505 | ID=Msa0523810-mRNA-1:cds;Parent=Msa0523810-mRNA-1 |
| chr3_4 | CDS | 77255663 | 77255688 | 77255663 | ID=Msa0523810-mRNA-1:cds;Parent=Msa0523810-mRNA-1 |
| chr3_4 | three_prime_UTR | 77255689 | 77256030 | 77255689 | ID=Msa0523810-mRNA-1:three_prime_utr;Parent=Msa0523810-mRNA-1 |
| Gene Sequence |
| Protein sequence |
