AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0171870

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0171870 MtrunA17_Chr1g0190021 98.423 761 12 0 4 764 2 762 0.0 1546
Msa0171870 MtrunA17_Chr7g0274831 71.660 741 203 6 26 764 30 765 0.0 1090
Msa0171870 MtrunA17_Chr1g0186431 55.817 765 320 8 4 760 3 757 0.0 861
Msa0171870 MtrunA17_Chr1g0168161 51.783 757 348 9 10 757 9 757 0.0 769
Msa0171870 MtrunA17_Chr4g0013831 38.102 748 431 18 28 759 3 734 2.90e-160 482
Msa0171870 MtrunA17_Chr7g0269631 37.402 639 361 15 28 645 3 623 1.03e-110 350
Msa0171870 MtrunA17_Chr4g0077091 56.164 73 31 1 689 760 1 73 1.17e-19 84.0
Msa0171870 MtrunA17_Chr8g0377481 33.083 133 79 3 636 760 840 970 3.82e-15 79.7
Msa0171870 MtrunA17_Chr8g0377481 25.595 168 125 0 352 519 371 538 1.08e-12 72.0
Msa0171870 MtrunA17_Chr8g0371601 23.797 395 245 15 362 717 460 837 3.43e-14 77.0
Msa0171870 MtrunA17_Chr8g0371601 33.077 130 62 3 636 744 1028 1153 6.10e-12 69.7
Msa0171870 MtrunA17_Chr3g0122391 34.921 126 71 3 636 753 898 1020 1.50e-13 74.7
Msa0171870 MtrunA17_Chr3g0122391 23.810 168 128 0 352 519 419 586 7.70e-13 72.4
Msa0171870 MtrunA17_Chr8g0392301 25.000 208 153 1 352 556 362 569 2.32e-13 73.9
Msa0171870 MtrunA17_Chr5g0405701 24.339 378 230 12 362 700 498 858 1.24e-11 68.6
Msa0171870 MtrunA17_Chr3g0136601 26.531 196 128 5 329 519 331 515 2.13e-11 67.8
Msa0171870 MtrunA17_Chr1g0150511 25.128 195 132 4 329 519 337 521 6.08e-11 66.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0171870 AT3G04580.2 59.813 749 286 8 25 762 22 766 0.0 872
Msa0171870 AT3G04580.1 59.813 749 286 8 25 762 22 766 0.0 872
Msa0171870 AT3G23150.1 51.282 780 340 14 10 764 9 773 0.0 726
Msa0171870 AT3G23150.2 52.694 594 255 10 10 589 9 590 0.0 574
Msa0171870 AT1G04310.1 47.134 628 302 10 8 619 10 623 2.66e-178 526
Msa0171870 AT1G04310.2 47.134 628 302 10 8 619 10 623 2.66e-178 526
Msa0171870 AT1G66340.1 40.296 742 413 15 30 757 4 729 1.77e-169 506
Msa0171870 AT2G40940.1 37.748 604 346 15 31 618 3 592 6.14e-111 350
Msa0171870 AT5G35750.1 23.823 361 224 9 353 668 567 921 4.77e-17 86.7
Msa0171870 AT2G01830.5 25.568 176 131 0 352 527 440 615 1.81e-15 81.3
Msa0171870 AT2G01830.1 25.568 176 131 0 352 527 428 603 1.84e-15 81.3
Msa0171870 AT2G01830.4 25.568 176 131 0 352 527 428 603 1.84e-15 81.3
Msa0171870 AT2G01830.6 25.568 176 131 0 352 527 428 603 1.84e-15 81.3
Msa0171870 AT2G01830.3 25.568 176 131 0 352 527 428 603 1.84e-15 81.3
Msa0171870 AT2G01830.2 25.568 176 131 0 352 527 451 626 2.11e-15 81.3
Msa0171870 AT1G27320.1 25.134 187 140 0 333 519 410 596 3.73e-14 77.0
Msa0171870 AT5G10720.1 23.364 321 207 11 329 633 327 624 4.02e-12 70.5
Msa0171870 AT2G17820.1 23.120 359 225 9 363 684 488 832 3.69e-11 67.4

Find 209 sgRNAs with CRISPR-Local

Find 317 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTAAAATCTTGAATTATTTA+TGG 0.143992 1_4:-56700369 None:intergenic
CAAGTAATTATGCATATTAT+TGG 0.179884 1_4:+56701985 Msa0171870:CDS
CCCTCTCCTTCTTAGAATTA+AGG 0.206742 1_4:+56700919 Msa0171870:CDS
GGATATCTCTGAAAATAAAA+AGG 0.209690 1_4:+56701801 Msa0171870:CDS
TTCAAAATCTGCACTATATA+AGG 0.240830 1_4:-56704203 None:intergenic
TGCGATCTGCTTCATTGATT+TGG 0.246681 1_4:+56700412 Msa0171870:five_prime_UTR
TGTGAATTTGAATAATCTTT+AGG 0.255453 1_4:-56703636 None:intergenic
TTCATCAGGGTTTGAGTGCC+TGG 0.258763 1_4:+56703758 Msa0171870:CDS
CCATGATTGTGGTTGCATTA+TGG 0.269036 1_4:+56704243 Msa0171870:three_prime_UTR
GATGAAGGAGGATTGGTTTC+CGG 0.271626 1_4:-56703980 None:intergenic
TCCTTTCCTATTGTCTTATT+CGG 0.272642 1_4:+56700246 Msa0171870:five_prime_UTR
GCTATGATCAAAGGCCAATT+AGG 0.272954 1_4:-56703891 None:intergenic
TGTTGAGCTTTCTAAGGCTT+TGG 0.281832 1_4:+56701093 Msa0171870:CDS
TACTCTTGTTGAGCTTTCTA+AGG 0.286989 1_4:+56701087 Msa0171870:CDS
GCGATCTGCTTCATTGATTT+GGG 0.299830 1_4:+56700413 Msa0171870:five_prime_UTR
TGCACCAAACCCTGAGAGTT+TGG 0.309721 1_4:-56703552 None:intergenic
TTTATGTCTACATACTCAAC+TGG 0.311908 1_4:-56702117 None:intergenic
GGAAATTCAATGGCCCTAAT+TGG 0.315301 1_4:+56703877 Msa0171870:CDS
GGATGCTTACTAGGGAAATT+AGG 0.316546 1_4:+56701032 Msa0171870:CDS
TAAAATCTTGAATTATTTAT+GGG 0.318268 1_4:-56700368 None:intergenic
ATGTTATGCTATACTAGTTT+TGG 0.328451 1_4:+56701414 Msa0171870:CDS
CTCGTACTGTGCATCCTCCT+TGG 0.328507 1_4:-56700175 None:intergenic
GATTATTCAAATTCACAGTT+TGG 0.328563 1_4:+56703642 Msa0171870:CDS
AGGAAGCTAGTTGGCATGTT+AGG 0.342538 1_4:+56701011 Msa0171870:CDS
AGGACTGAACAAAAGATTAT+TGG 0.343143 1_4:+56701724 Msa0171870:CDS
CAGATGATGATAGTTTAAAT+AGG 0.352906 1_4:+56703685 Msa0171870:CDS
ACTGACTATTTGTAAACAAT+TGG 0.356684 1_4:-56704128 None:intergenic
ACTTCAAAACCATCCATTTC+AGG 0.357064 1_4:-56703840 None:intergenic
ATCTGTTGTTTCGTTGAAAT+CGG 0.358826 1_4:-56702180 None:intergenic
ATTTGCATAATTGTGCTGTT+TGG 0.362682 1_4:+56701116 Msa0171870:CDS
TTCCTTATCTCCAACACATC+AGG 0.366420 1_4:-56701235 None:intergenic
TTCTTCCAGGTTCGGACTCT+AGG 0.375382 1_4:+56701437 Msa0171870:CDS
CTAGTAACAGCAGTTTCATC+AGG 0.380902 1_4:+56703744 Msa0171870:CDS
CAGGTTCGGACTCTAGGGTT+TGG 0.381488 1_4:+56701443 Msa0171870:CDS
GGCATGTTAGGATGCTTACT+AGG 0.396870 1_4:+56701023 Msa0171870:CDS
TGGAATTGGGGCAAGAAGTT+GGG 0.397658 1_4:+56700972 Msa0171870:CDS
TCATGAATTGAAATCGGATT+CGG 0.398997 1_4:+56701174 Msa0171870:CDS
TTTGACTCATGAATTGAAAT+CGG 0.399140 1_4:+56701168 Msa0171870:CDS
GAATCACAACAGTGAATCTA+AGG 0.402957 1_4:+56702215 Msa0171870:CDS
ATGGAATTGGGGCAAGAAGT+TGG 0.404627 1_4:+56700971 Msa0171870:CDS
GTCCATGGCTCATCACTGTT+TGG 0.409431 1_4:-56701642 None:intergenic
CCCTCAACATGGAATGTAGA+AGG 0.409888 1_4:-56701852 None:intergenic
CATGAATTGAAATCGGATTC+GGG 0.409935 1_4:+56701175 Msa0171870:CDS
AGATAATGCAAGGTAATATA+TGG 0.410537 1_4:+56703523 Msa0171870:intron
AGGCAGAATGTGATGGAATT+GGG 0.410985 1_4:+56700959 Msa0171870:CDS
AGTTGAGGTGGTGGCTGATC+AGG 0.412583 1_4:+56701486 Msa0171870:CDS
GAGGCAGAATGTGATGGAAT+TGG 0.412904 1_4:+56700958 Msa0171870:CDS
ACAAAGTAAAGAAGCTCAAT+TGG 0.414136 1_4:-56700698 None:intergenic
TTGAAGTGGCGGCAAGGATC+AGG 0.415267 1_4:+56703856 Msa0171870:CDS
AGCATACATACAATCCTTGT+TGG 0.417816 1_4:+56700629 Msa0171870:CDS
TCGTACTGTGCATCCTCCTT+GGG 0.425837 1_4:-56700174 None:intergenic
ATTACCAAACTCTCAGGGTT+TGG 0.429450 1_4:+56703548 Msa0171870:CDS
ATGGATATTACCAAACTCTC+AGG 0.429769 1_4:+56703542 Msa0171870:CDS
CCTTCTACATTCCATGTTGA+GGG 0.431332 1_4:+56701852 Msa0171870:CDS
ATCTCTCTCCTATCATCATT+CGG 0.433427 1_4:-56701142 None:intergenic
ACCTCAACTATCTCCATCTC+TGG 0.436575 1_4:-56701472 None:intergenic
TTGTGTGTGTATCAAGGGTT+TGG 0.438334 1_4:+56701898 Msa0171870:CDS
GCAACTCCTAGTTTAGATTC+AGG 0.441706 1_4:-56701283 None:intergenic
TTTGAGACTGTTGCAATGCT+CGG 0.446015 1_4:-56701582 None:intergenic
GAAGAACCGAATAAGACAAT+AGG 0.446043 1_4:-56700252 None:intergenic
CAAACCCTAGAGTCCGAACC+TGG 0.447027 1_4:-56701442 None:intergenic
GAAAGCAAGAGTTGAAAAGA+AGG 0.447107 1_4:-56700827 None:intergenic
TAAGGAAAACTAAAGGGGTT+AGG 0.448583 1_4:+56701251 Msa0171870:CDS
CTATGATCAAAGGCCAATTA+GGG 0.451338 1_4:-56703890 None:intergenic
AAAATAGCTTATAGAGAACT+TGG 0.454392 1_4:+56704092 Msa0171870:three_prime_UTR
CTGGGTGCTATAAGTGGCTC+TGG 0.456114 1_4:+56703777 Msa0171870:CDS
CTTCTTCTAAAGTTTCAGAT+AGG 0.459490 1_4:+56703585 Msa0171870:CDS
TACAAGTGAGGGTGGTGATA+AGG 0.459678 1_4:+56702059 Msa0171870:CDS
GAACGCGATGATGGCCAGCC+AGG 0.462578 1_4:+56701606 Msa0171870:CDS
GACTGGGATAATGATGGTTA+TGG 0.468443 1_4:-56704325 None:intergenic
TGGAGATAAGGAAAACTAAA+GGG 0.470604 1_4:+56701245 Msa0171870:CDS
TAATGCAGAAGAGCAAGTTA+AGG 0.472874 1_4:+56703923 Msa0171870:CDS
AGACATTCACATGCCTGAAA+TGG 0.474093 1_4:+56703827 Msa0171870:CDS
TCCTTCTACATTCCATGTTG+AGG 0.474448 1_4:+56701851 Msa0171870:CDS
GTTGCGAGTAGTGGCGGTGG+GGG 0.474504 1_4:+56701301 Msa0171870:CDS
GGAGTTGCGAGTAGTGGCGG+TGG 0.474808 1_4:+56701298 Msa0171870:CDS
CAAAGGAGGGACGCCGGAGT+TGG 0.475152 1_4:+56701384 Msa0171870:CDS
CTTCATGTTTCGAATTTCAA+AGG 0.475335 1_4:+56701367 Msa0171870:CDS
AAAGAAGCTACTCGAGAGGC+TGG 0.477400 1_4:+56703716 Msa0171870:CDS
GAGTTGCGAGTAGTGGCGGT+GGG 0.478888 1_4:+56701299 Msa0171870:CDS
CGAGAACCGACGCGTGAGAA+AGG 0.484376 1_4:-56701519 None:intergenic
ACCCTGATGTGTTGGAGATA+AGG 0.484829 1_4:+56701233 Msa0171870:CDS
GAATGACTTCCTAGCCTGGC+TGG 0.485805 1_4:-56701620 None:intergenic
AAAAGATTAAGAAAGGAAAG+TGG 0.488804 1_4:-56700221 None:intergenic
TCATCAGGGTTTGAGTGCCT+GGG 0.491049 1_4:+56703759 Msa0171870:CDS
TCTTCCAGGTTCGGACTCTA+GGG 0.492992 1_4:+56701438 Msa0171870:CDS
AAGTGCTTGTGTGTGTATCA+AGG 0.498129 1_4:+56701892 Msa0171870:CDS
TGGGATTATGAAGAAACAAA+AGG 0.498382 1_4:+56700991 Msa0171870:CDS
AACATATAGAGAGAGAATGA+AGG 0.498453 1_4:-56700275 None:intergenic
TTTGGAATGACTTCCTAGCC+TGG 0.501343 1_4:-56701624 None:intergenic
TTTGGATGCCGAATGATGAT+AGG 0.501945 1_4:+56701134 Msa0171870:CDS
TTGGAGATAAGGAAAACTAA+AGG 0.504670 1_4:+56701244 Msa0171870:CDS
TTGAGGCCTGAATCTAAACT+AGG 0.504811 1_4:+56701277 Msa0171870:CDS
TGAGGAATTTAGCAACAGTA+AGG 0.504921 1_4:-56700850 None:intergenic
AGGCCAATGCATTCAGTTGT+GGG 0.505607 1_4:+56701670 Msa0171870:CDS
GACTCTGACTGGGATAATGA+TGG 0.506220 1_4:-56704331 None:intergenic
CCCTCACCTTAATTCTAAGA+AGG 0.509242 1_4:-56700925 None:intergenic
CCATAATGCAACCACAATCA+TGG 0.509533 1_4:-56704243 None:intergenic
CGATGATGGCCAGCCAGGCT+AGG 0.509807 1_4:+56701611 Msa0171870:CDS
ACATATAGAGAGAGAATGAA+GGG 0.514389 1_4:-56700274 None:intergenic
GAGTTTAGTAAACGATGTAA+TGG 0.515957 1_4:+56701780 Msa0171870:CDS
AACTCTCAGGGTTTGGTGCA+AGG 0.516591 1_4:+56703555 Msa0171870:CDS
GAGTGCCTGGGTGCTATAAG+TGG 0.519942 1_4:+56703771 Msa0171870:CDS
GCATTGGCCTCCTCAGTCCA+TGG 0.520880 1_4:-56701657 None:intergenic
AAGGATAGATGCATGCTGGC+TGG 0.523016 1_4:+56703942 Msa0171870:CDS
GTCTCAAAAGAACGCGATGA+TGG 0.526187 1_4:+56701597 Msa0171870:CDS
TTTCTTGAGGCAGAATGTGA+TGG 0.526914 1_4:+56700952 Msa0171870:CDS
GAGAACCGACGCGTGAGAAA+GGG 0.532015 1_4:-56701518 None:intergenic
TGTTGAACACGCGTGACCGA+GGG 0.532022 1_4:+56702013 Msa0171870:CDS
GCTATCTGATGAAGGAGGAT+TGG 0.533500 1_4:-56703987 None:intergenic
TGTGATTGACCCTGATGTGT+TGG 0.534459 1_4:+56701225 Msa0171870:CDS
TATGTGCCGGAGGTTGGTAC+AGG 0.536453 1_4:+56702254 Msa0171870:CDS
GCAAGGATCAGGAAATTCAA+TGG 0.537123 1_4:+56703867 Msa0171870:CDS
CTCTCTGACAATTGATGATG+CGG 0.537732 1_4:-56700300 None:intergenic
CATAATATAGAATTGTAAAA+CGG 0.538369 1_4:+56704382 Msa0171870:three_prime_UTR
CTTCAATATGTGCCGGAGGT+TGG 0.538586 1_4:+56702248 Msa0171870:CDS
GCTATAAGAGCTATGATCAA+AGG 0.539373 1_4:-56703900 None:intergenic
CAACGAAACAACAGATTGGT+AGG 0.539988 1_4:+56702187 Msa0171870:CDS
CATACCACATAGAACTATGA+AGG 0.542546 1_4:-56700768 None:intergenic
GAGGCCAATGCATTCAGTTG+TGG 0.544582 1_4:+56701669 Msa0171870:CDS
TTGTTGAACACGCGTGACCG+AGG 0.544947 1_4:+56702012 Msa0171870:CDS
TTGTGCTGTGGCCATGATTG+TGG 0.545057 1_4:+56704232 Msa0171870:three_prime_UTR
GGTTTGGACCGCTCCAGAGA+TGG 0.547219 1_4:+56701459 Msa0171870:CDS
ATTTCAACGAAACAACAGAT+TGG 0.547312 1_4:+56702183 Msa0171870:CDS
TGAAGAAACAGCAATTTGAA+AGG 0.553269 1_4:-56700737 None:intergenic
TGTTTCAAGAGGGTAATATG+AGG 0.554581 1_4:+56701704 Msa0171870:CDS
AACATGTATCTTTCAAGCGA+TGG 0.555713 1_4:-56703609 None:intergenic
TGCATGCTGGCTGGAATGAA+TGG 0.556631 1_4:+56703951 Msa0171870:CDS
GTTCATCCGCTATCTGATGA+AGG 0.557017 1_4:-56703995 None:intergenic
AGTGCTTGTGTGTGTATCAA+GGG 0.557402 1_4:+56701893 Msa0171870:CDS
CTGGAATGAATGGTGTGATC+CGG 0.559043 1_4:+56703961 Msa0171870:CDS
AGTTGCGAGTAGTGGCGGTG+GGG 0.561735 1_4:+56701300 Msa0171870:CDS
ATGTTTCGAATTTCAAAGGA+GGG 0.563184 1_4:+56701371 Msa0171870:CDS
GAATTTCAAAGGAGGGACGC+CGG 0.563898 1_4:+56701378 Msa0171870:CDS
CACCTACCTGTACCAACCTC+CGG 0.564583 1_4:-56702260 None:intergenic
AACACATCAGGGTCAATCAC+AGG 0.564986 1_4:-56701223 None:intergenic
AACATGGAATGTAGAAGGAA+AGG 0.568366 1_4:-56701847 None:intergenic
CGTAGCCCTTTCTCACGCGT+CGG 0.568817 1_4:+56701513 Msa0171870:CDS
AAATTCGAAACATGAAGCAT+CGG 0.568829 1_4:-56701361 None:intergenic
TATTCAAATTCACAGTTTGG+AGG 0.570060 1_4:+56703645 Msa0171870:CDS
ATCCCCACAACTGAATGCAT+TGG 0.570182 1_4:-56701673 None:intergenic
CATGTTTCGAATTTCAAAGG+AGG 0.571827 1_4:+56701370 Msa0171870:CDS
GCATGTTAGGATGCTTACTA+GGG 0.572208 1_4:+56701024 Msa0171870:CDS
AGATCGGTCCTACTTCGTGC+AGG 0.573170 1_4:+56704020 Msa0171870:CDS
TGCTCTTGTGTCGTGTGCAA+CGG 0.573831 1_4:+56700874 Msa0171870:CDS
AGAAACAAAAGGAAGCTAGT+TGG 0.575842 1_4:+56701002 Msa0171870:CDS
ACCTTAATTCTAAGAAGGAG+AGG 0.576433 1_4:-56700920 None:intergenic
ATTCACATGCCTGAAATGGA+TGG 0.579300 1_4:+56703831 Msa0171870:CDS
TTCCAAACAGTGATGAGCCA+TGG 0.580133 1_4:+56701640 Msa0171870:CDS
CCTTAATTCTAAGAAGGAGA+GGG 0.581303 1_4:-56700919 None:intergenic
TCCTTCTTAGAATTAAGGTG+AGG 0.582740 1_4:+56700924 Msa0171870:CDS
CCTTCTTAGAATTAAGGTGA+GGG 0.583317 1_4:+56700925 Msa0171870:CDS
GCTTGAGCTTCAATATGTGC+CGG 0.584592 1_4:+56702241 Msa0171870:CDS
TCCTTATCTCCAACACATCA+GGG 0.586059 1_4:-56701234 None:intergenic
TTTGACAAGGTCGAGGCCCA+AGG 0.587342 1_4:+56700158 Msa0171870:five_prime_UTR
AAAGATTAAGAAAGGAAAGT+GGG 0.589261 1_4:-56700220 None:intergenic
AACTATCTCCATCTCTGGAG+CGG 0.592322 1_4:-56701467 None:intergenic
TGAGGAGTTGGGTGCTGTCG+CGG 0.592472 1_4:+56701327 Msa0171870:CDS
ACCGAATAAGACAATAGGAA+AGG 0.597626 1_4:-56700247 None:intergenic
AGTTAAGGATAGATGCATGC+TGG 0.598062 1_4:+56703938 Msa0171870:CDS
AAGGTTTCATCTCTAACTGA+AGG 0.599231 1_4:-56701828 None:intergenic
TGGATATTACCAAACTCTCA+GGG 0.599355 1_4:+56703543 Msa0171870:CDS
GGAGATAAGGAAAACTAAAG+GGG 0.605752 1_4:+56701246 Msa0171870:CDS
ATGCTTTCATTGTTTCAAGA+GGG 0.605913 1_4:+56701694 Msa0171870:CDS
AAACTAGGAGTTGCGAGTAG+TGG 0.606504 1_4:+56701292 Msa0171870:CDS
CTAGGAGTTGCGAGTAGTGG+CGG 0.609987 1_4:+56701295 Msa0171870:CDS
AAGAAGCTACTCGAGAGGCT+GGG 0.610653 1_4:+56703717 Msa0171870:CDS
GGTGCTATAAGTGGCTCTGG+TGG 0.610827 1_4:+56703780 Msa0171870:CDS
TAGTAACAGCAGTTTCATCA+GGG 0.611000 1_4:+56703745 Msa0171870:CDS
ATAGCCTTCATAGTTCTATG+TGG 0.611293 1_4:+56700764 Msa0171870:CDS
AGGTAAATCTGCAACTCCGT+GGG 0.612678 1_4:+56700196 Msa0171870:five_prime_UTR
AGAAAGGAAAGTGGGTCCCA+CGG 0.614399 1_4:-56700212 None:intergenic
AATCTTATGCAGATAATGCA+AGG 0.616623 1_4:+56703513 Msa0171870:intron
GAGGAATTTAGCAACAGTAA+GGG 0.621503 1_4:-56700849 None:intergenic
GATGCTTTCATTGTTTCAAG+AGG 0.621734 1_4:+56701693 Msa0171870:CDS
CAAGGAGGATGCACAGTACG+AGG 0.621953 1_4:+56700176 Msa0171870:five_prime_UTR
GATGGAGATAGTTGAGGTGG+TGG 0.622877 1_4:+56701477 Msa0171870:CDS
TCACAACAGTGAATCTAAGG+AGG 0.625084 1_4:+56702218 Msa0171870:CDS
GATAGCGGATGAACTTAGAT+CGG 0.629033 1_4:+56704004 Msa0171870:CDS
GCAAGCGGCTTCCCTCAACA+TGG 0.629945 1_4:-56701863 None:intergenic
CAAGCACTTAGCAATGCAAG+CGG 0.631343 1_4:-56701878 None:intergenic
GGTGACACAATGTTGAAAGT+CGG 0.632956 1_4:+56701745 Msa0171870:CDS
CTAAGAAGGAGAGGGATCAA+CGG 0.639905 1_4:-56700911 None:intergenic
TAACATGTATCAACCAACTC+CGG 0.640709 1_4:-56701397 None:intergenic
CACAACAGTGAATCTAAGGA+GGG 0.640846 1_4:+56702219 Msa0171870:CDS
TCCAGAGATGGAGATAGTTG+AGG 0.641469 1_4:+56701471 Msa0171870:CDS
GGCCAATGCATTCAGTTGTG+GGG 0.642247 1_4:+56701671 Msa0171870:CDS
TGAGCTTCAATATGTGCCGG+AGG 0.643404 1_4:+56702244 Msa0171870:CDS
ATAATACTTTGACAAGGTCG+AGG 0.644883 1_4:+56700151 Msa0171870:five_prime_UTR
TTTGAATTGTGATTGTGCTG+TGG 0.646122 1_4:+56704220 Msa0171870:three_prime_UTR
AGAGATGGAGATAGTTGAGG+TGG 0.648766 1_4:+56701474 Msa0171870:CDS
GGCAGAATGTGATGGAATTG+GGG 0.651385 1_4:+56700960 Msa0171870:CDS
TTATGTCTACATACTCAACT+GGG 0.652246 1_4:-56702116 None:intergenic
CAGTGATGAGCCATGGACTG+AGG 0.655532 1_4:+56701647 Msa0171870:CDS
GAGGTAAATCTGCAACTCCG+TGG 0.656593 1_4:+56700195 Msa0171870:five_prime_UTR
CTTCATCATCACAGTTACAG+TGG 0.657629 1_4:-56700595 None:intergenic
TGAGGTGGTGGCTGATCAGG+TGG 0.658305 1_4:+56701489 Msa0171870:CDS
CGAAACAACAGATTGGTAGG+AGG 0.659295 1_4:+56702190 Msa0171870:CDS
CATCTGCTAGCAAAATCTTG+AGG 0.670396 1_4:-56703668 None:intergenic
TGATGAGCCATGGACTGAGG+AGG 0.672113 1_4:+56701650 Msa0171870:CDS
CAGAGCCACTTATAGCACCC+AGG 0.678501 1_4:-56703776 None:intergenic
CATCCGCTATCTGATGAAGG+AGG 0.680590 1_4:-56703992 None:intergenic
CGACGCGTGAGAAAGGGCTA+CGG 0.681594 1_4:-56701512 None:intergenic
AATCCTCCTTCATCAGATAG+CGG 0.688493 1_4:+56703989 Msa0171870:CDS
GACAAGGTCGAGGCCCAAGG+AGG 0.698397 1_4:+56700161 Msa0171870:five_prime_UTR
TGACAAAGAAGCTACTCGAG+AGG 0.707649 1_4:+56703712 Msa0171870:CDS
AGAAGGAGAGGGATCAACGG+CGG 0.710786 1_4:-56700908 None:intergenic
ATGAACATAATACTTTGACA+AGG 0.737030 1_4:+56700145 Msa0171870:five_prime_UTR
CACACGACACAAGAGCAGTG+AGG 0.767368 1_4:-56700868 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TAAAATCTTGAATTATTTAT+GGG - chr1_4:56700371-56700390 None:intergenic 10.0%
!! TTAAAATCTTGAATTATTTA+TGG - chr1_4:56700372-56700391 None:intergenic 10.0%
!! ATTAATTAAATAATTACACA+GGG - chr1_4:56703448-56703467 None:intergenic 10.0%
!! TGTAATTATTTAATTAATCA+TGG + chr1_4:56703450-56703469 Msa0171870:intron 10.0%
!! ATTATAAGTATAAAGAAGTA+AGG - chr1_4:56703313-56703332 None:intergenic 15.0%
!! TAGTGCTTTAATAAAATAAT+TGG - chr1_4:56703341-56703360 None:intergenic 15.0%
!! GATTAATTAAATAATTACAC+AGG - chr1_4:56703449-56703468 None:intergenic 15.0%
!! CATAATATAGAATTGTAAAA+CGG + chr1_4:56704382-56704401 Msa0171870:three_prime_UTR 15.0%
!!! TAATTCAAGATTTTAAGAAC+TGG + chr1_4:56700376-56700395 Msa0171870:five_prime_UTR 20.0%
!!! AATTCAAGATTTTAAGAACT+GGG + chr1_4:56700377-56700396 Msa0171870:five_prime_UTR 20.0%
!!! GATATCTCTGAAAATAAAAA+GGG + chr1_4:56701802-56701821 Msa0171870:CDS 20.0%
!! CAAGTAATTATGCATATTAT+TGG + chr1_4:56701985-56702004 Msa0171870:CDS 20.0%
!!! AAATTTGATTTTCAGATTAC+TGG + chr1_4:56702138-56702157 Msa0171870:CDS 20.0%
!!! AATTTTACATCCTTAATGAA+TGG - chr1_4:56702500-56702519 None:intergenic 20.0%
!! TTTCTTATGTTGAAAGATTT+AGG - chr1_4:56702832-56702851 None:intergenic 20.0%
!!! CTTTTATCTTAATAGTATCA+CGG + chr1_4:56702888-56702907 Msa0171870:intron 20.0%
!!! TAATTTTGTTTTCCTCTTTT+AGG + chr1_4:56702978-56702997 Msa0171870:intron 20.0%
!! TGTGAATTTGAATAATCTTT+AGG - chr1_4:56703639-56703658 None:intergenic 20.0%
! ATGAACATAATACTTTGACA+AGG + chr1_4:56700145-56700164 Msa0171870:five_prime_UTR 25.0%
! AAAGATTAAGAAAGGAAAGT+GGG - chr1_4:56700223-56700242 None:intergenic 25.0%
! AAAAGATTAAGAAAGGAAAG+TGG - chr1_4:56700224-56700243 None:intergenic 25.0%
! AAGGAGAAAAAGATTAAGAA+AGG - chr1_4:56700231-56700250 None:intergenic 25.0%
! TTTGACTCATGAATTGAAAT+CGG + chr1_4:56701168-56701187 Msa0171870:CDS 25.0%
!!! ATGTTATGCTATACTAGTTT+TGG + chr1_4:56701414-56701433 Msa0171870:CDS 25.0%
!! GGATATCTCTGAAAATAAAA+AGG + chr1_4:56701801-56701820 Msa0171870:CDS 25.0%
! GATAAGGATGACAAAAAATT+TGG + chr1_4:56702075-56702094 Msa0171870:CDS 25.0%
!!! ATGACAAAAAATTTGGTGTA+TGG + chr1_4:56702082-56702101 Msa0171870:CDS 25.0%
! CACTGTCTATATTATATATG+TGG + chr1_4:56702286-56702305 Msa0171870:intron 25.0%
! TTTCTTCAAACCATTCATTA+AGG + chr1_4:56702487-56702506 Msa0171870:intron 25.0%
!! AAAGATTTAGGTTATAACAG+AGG - chr1_4:56702820-56702839 None:intergenic 25.0%
! CGTGATACTATTAAGATAAA+AGG - chr1_4:56702890-56702909 None:intergenic 25.0%
!!! TTTTGTAGTCTTGTTCATAT+TGG - chr1_4:56703145-56703164 None:intergenic 25.0%
!! TTCTGACTTTATTTACATTG+TGG + chr1_4:56703490-56703509 Msa0171870:intron 25.0%
! AGATAATGCAAGGTAATATA+TGG + chr1_4:56703523-56703542 Msa0171870:intron 25.0%
! GATTATTCAAATTCACAGTT+TGG + chr1_4:56703642-56703661 Msa0171870:CDS 25.0%
! CAGATGATGATAGTTTAAAT+AGG + chr1_4:56703685-56703704 Msa0171870:CDS 25.0%
! AAAATAGCTTATAGAGAACT+TGG + chr1_4:56704092-56704111 Msa0171870:three_prime_UTR 25.0%
! ACTGACTATTTGTAAACAAT+TGG - chr1_4:56704131-56704150 None:intergenic 25.0%
! TTCAAAATCTGCACTATATA+AGG - chr1_4:56704206-56704225 None:intergenic 25.0%
! TCCTTTCCTATTGTCTTATT+CGG + chr1_4:56700246-56700265 Msa0171870:five_prime_UTR 30.0%
ACATATAGAGAGAGAATGAA+GGG - chr1_4:56700277-56700296 None:intergenic 30.0%
AACATATAGAGAGAGAATGA+AGG - chr1_4:56700278-56700297 None:intergenic 30.0%
!! ATTTGGGTCATTTTCTAATC+AGG + chr1_4:56700429-56700448 Msa0171870:five_prime_UTR 30.0%
ACAAAGTAAAGAAGCTCAAT+TGG - chr1_4:56700701-56700720 None:intergenic 30.0%
TGAAGAAACAGCAATTTGAA+AGG - chr1_4:56700740-56700759 None:intergenic 30.0%
TGGGATTATGAAGAAACAAA+AGG + chr1_4:56700991-56701010 Msa0171870:CDS 30.0%
! ATTTGCATAATTGTGCTGTT+TGG + chr1_4:56701116-56701135 Msa0171870:CDS 30.0%
TCATGAATTGAAATCGGATT+CGG + chr1_4:56701174-56701193 Msa0171870:CDS 30.0%
TTGGAGATAAGGAAAACTAA+AGG + chr1_4:56701244-56701263 Msa0171870:CDS 30.0%
TGGAGATAAGGAAAACTAAA+GGG + chr1_4:56701245-56701264 Msa0171870:CDS 30.0%
AAATTCGAAACATGAAGCAT+CGG - chr1_4:56701364-56701383 None:intergenic 30.0%
CTTCATGTTTCGAATTTCAA+AGG + chr1_4:56701367-56701386 Msa0171870:CDS 30.0%
ATGTTTCGAATTTCAAAGGA+GGG + chr1_4:56701371-56701390 Msa0171870:CDS 30.0%
ATGCTTTCATTGTTTCAAGA+GGG + chr1_4:56701694-56701713 Msa0171870:CDS 30.0%
AGGACTGAACAAAAGATTAT+TGG + chr1_4:56701724-56701743 Msa0171870:CDS 30.0%
GAGTTTAGTAAACGATGTAA+TGG + chr1_4:56701780-56701799 Msa0171870:CDS 30.0%
! ATCTCTGAAAATAAAAAGGG+TGG + chr1_4:56701805-56701824 Msa0171870:CDS 30.0%
! TCTTTGCCTGAAAAAGTTTT+AGG + chr1_4:56701943-56701962 Msa0171870:CDS 30.0%
TTATGTCTACATACTCAACT+GGG - chr1_4:56702119-56702138 None:intergenic 30.0%
TTTATGTCTACATACTCAAC+TGG - chr1_4:56702120-56702139 None:intergenic 30.0%
!! ATCTGTTGTTTCGTTGAAAT+CGG - chr1_4:56702183-56702202 None:intergenic 30.0%
ATTTCAACGAAACAACAGAT+TGG + chr1_4:56702183-56702202 Msa0171870:CDS 30.0%
AGACATAACATAGACAATCA+AGG - chr1_4:56702322-56702341 None:intergenic 30.0%
AATGCTTAAAGAATGCTGTT+TGG + chr1_4:56702375-56702394 Msa0171870:intron 30.0%
! AAGAAACTGATTCTACGAAT+CGG + chr1_4:56702658-56702677 Msa0171870:intron 30.0%
TTGTGTGATGTAAACTCAAA+AGG - chr1_4:56702945-56702964 None:intergenic 30.0%
! GTGTCTTTTCTTGAATTGTA+AGG + chr1_4:56703097-56703116 Msa0171870:intron 30.0%
! TCCTTTTCATCAATGGAAAT+AGG + chr1_4:56703174-56703193 Msa0171870:intron 30.0%
ACCTATTTCCATTGATGAAA+AGG - chr1_4:56703178-56703197 None:intergenic 30.0%
! ATAAGAAAGCTTGTGCTTTT+TGG + chr1_4:56703203-56703222 Msa0171870:intron 30.0%
!! TAAGAAAGCTTGTGCTTTTT+GGG + chr1_4:56703204-56703223 Msa0171870:intron 30.0%
! ATCTTTTGTGCCTTAAAATC+TGG + chr1_4:56703277-56703296 Msa0171870:intron 30.0%
! TCCTACTTTACCAGATTTTA+AGG - chr1_4:56703290-56703309 None:intergenic 30.0%
! GAATAACAAGTTCTGATTTG+TGG - chr1_4:56703386-56703405 None:intergenic 30.0%
AATCTTATGCAGATAATGCA+AGG + chr1_4:56703513-56703532 Msa0171870:intron 30.0%
!! CTTCTTCTAAAGTTTCAGAT+AGG + chr1_4:56703585-56703604 Msa0171870:CDS 30.0%
TATTCAAATTCACAGTTTGG+AGG + chr1_4:56703645-56703664 Msa0171870:CDS 30.0%
!! GTTCTCTATAAGCTATTTTG+AGG - chr1_4:56704091-56704110 None:intergenic 30.0%
! CTTTTGTCACAAACTTATTG+TGG + chr1_4:56704180-56704199 Msa0171870:three_prime_UTR 30.0%
!!! TGTAAAACGGTGCTTTTTTA+AGG + chr1_4:56704395-56704414 Msa0171870:three_prime_UTR 30.0%
ATAATACTTTGACAAGGTCG+AGG + chr1_4:56700151-56700170 Msa0171870:five_prime_UTR 35.0%
ACCGAATAAGACAATAGGAA+AGG - chr1_4:56700250-56700269 None:intergenic 35.0%
GAAGAACCGAATAAGACAAT+AGG - chr1_4:56700255-56700274 None:intergenic 35.0%
AGCATACATACAATCCTTGT+TGG + chr1_4:56700629-56700648 Msa0171870:CDS 35.0%
! ATAGCCTTCATAGTTCTATG+TGG + chr1_4:56700764-56700783 Msa0171870:CDS 35.0%
CATACCACATAGAACTATGA+AGG - chr1_4:56700771-56700790 None:intergenic 35.0%
GAAAGCAAGAGTTGAAAAGA+AGG - chr1_4:56700830-56700849 None:intergenic 35.0%
GAGGAATTTAGCAACAGTAA+GGG - chr1_4:56700852-56700871 None:intergenic 35.0%
TGAGGAATTTAGCAACAGTA+AGG - chr1_4:56700853-56700872 None:intergenic 35.0%
! CCTTAATTCTAAGAAGGAGA+GGG - chr1_4:56700922-56700941 None:intergenic 35.0%
! ACCTTAATTCTAAGAAGGAG+AGG - chr1_4:56700923-56700942 None:intergenic 35.0%
TCCTTCTTAGAATTAAGGTG+AGG + chr1_4:56700924-56700943 Msa0171870:CDS 35.0%
CCTTCTTAGAATTAAGGTGA+GGG + chr1_4:56700925-56700944 Msa0171870:CDS 35.0%
AGAAACAAAAGGAAGCTAGT+TGG + chr1_4:56701002-56701021 Msa0171870:CDS 35.0%
TACTCTTGTTGAGCTTTCTA+AGG + chr1_4:56701087-56701106 Msa0171870:CDS 35.0%
ATCTCTCTCCTATCATCATT+CGG - chr1_4:56701145-56701164 None:intergenic 35.0%
CATGAATTGAAATCGGATTC+GGG + chr1_4:56701175-56701194 Msa0171870:CDS 35.0%
GGAGATAAGGAAAACTAAAG+GGG + chr1_4:56701246-56701265 Msa0171870:CDS 35.0%
TAAGGAAAACTAAAGGGGTT+AGG + chr1_4:56701251-56701270 Msa0171870:CDS 35.0%
CATGTTTCGAATTTCAAAGG+AGG + chr1_4:56701370-56701389 Msa0171870:CDS 35.0%
TAACATGTATCAACCAACTC+CGG - chr1_4:56701400-56701419 None:intergenic 35.0%
!!! ATACTAGTTTTGGTTCTTCC+AGG + chr1_4:56701424-56701443 Msa0171870:CDS 35.0%
GATGCTTTCATTGTTTCAAG+AGG + chr1_4:56701693-56701712 Msa0171870:CDS 35.0%
TGTTTCAAGAGGGTAATATG+AGG + chr1_4:56701704-56701723 Msa0171870:CDS 35.0%
AAGGTTTCATCTCTAACTGA+AGG - chr1_4:56701831-56701850 None:intergenic 35.0%
AACATGGAATGTAGAAGGAA+AGG - chr1_4:56701850-56701869 None:intergenic 35.0%
GAATCACAACAGTGAATCTA+AGG + chr1_4:56702215-56702234 Msa0171870:CDS 35.0%
GCAATAACTGATCTCATATG+AGG + chr1_4:56702576-56702595 Msa0171870:intron 35.0%
ATCAGTTTCTTGCAATTGCA+AGG - chr1_4:56702649-56702668 None:intergenic 35.0%
AAAAAAGAGTCTCGACACAA+CGG - chr1_4:56702720-56702739 None:intergenic 35.0%
GCTCTTAGCTGAAATTAGTA+TGG - chr1_4:56702787-56702806 None:intergenic 35.0%
! GATTTAGGTTATAACAGAGG+AGG - chr1_4:56702817-56702836 None:intergenic 35.0%
! TCTCACTTCCTTTTCATCAA+TGG + chr1_4:56703167-56703186 Msa0171870:intron 35.0%
!! AAGAAAGCTTGTGCTTTTTG+GGG + chr1_4:56703205-56703224 Msa0171870:intron 35.0%
GCCTTAAAATCTGGTAAAGT+AGG + chr1_4:56703286-56703305 Msa0171870:intron 35.0%
ATGGATATTACCAAACTCTC+AGG + chr1_4:56703542-56703561 Msa0171870:CDS 35.0%
TGGATATTACCAAACTCTCA+GGG + chr1_4:56703543-56703562 Msa0171870:CDS 35.0%
AACATGTATCTTTCAAGCGA+TGG - chr1_4:56703612-56703631 None:intergenic 35.0%
TAGTAACAGCAGTTTCATCA+GGG + chr1_4:56703745-56703764 Msa0171870:CDS 35.0%
ACTTCAAAACCATCCATTTC+AGG - chr1_4:56703843-56703862 None:intergenic 35.0%
!!! TGAAATGGATGGTTTTGAAG+TGG + chr1_4:56703842-56703861 Msa0171870:CDS 35.0%
CTATGATCAAAGGCCAATTA+GGG - chr1_4:56703893-56703912 None:intergenic 35.0%
GCTATAAGAGCTATGATCAA+AGG - chr1_4:56703903-56703922 None:intergenic 35.0%
TAATGCAGAAGAGCAAGTTA+AGG + chr1_4:56703923-56703942 Msa0171870:CDS 35.0%
TTTGAATTGTGATTGTGCTG+TGG + chr1_4:56704220-56704239 Msa0171870:three_prime_UTR 35.0%
!!! GTAACATTTTGACTCTGACT+GGG - chr1_4:56704344-56704363 None:intergenic 35.0%
!!! TGTAACATTTTGACTCTGAC+TGG - chr1_4:56704345-56704364 None:intergenic 35.0%
!! CTCTCTGACAATTGATGATG+CGG - chr1_4:56700303-56700322 None:intergenic 40.0%
! TGCGATCTGCTTCATTGATT+TGG + chr1_4:56700412-56700431 Msa0171870:five_prime_UTR 40.0%
!! GCGATCTGCTTCATTGATTT+GGG + chr1_4:56700413-56700432 Msa0171870:five_prime_UTR 40.0%
CTTCATCATCACAGTTACAG+TGG - chr1_4:56700598-56700617 None:intergenic 40.0%
!!! CACTGACTTTTTGACCAACA+AGG - chr1_4:56700646-56700665 None:intergenic 40.0%
CCCTCTCCTTCTTAGAATTA+AGG + chr1_4:56700919-56700938 Msa0171870:CDS 40.0%
! CCCTCACCTTAATTCTAAGA+AGG - chr1_4:56700928-56700947 None:intergenic 40.0%
TTTCTTGAGGCAGAATGTGA+TGG + chr1_4:56700952-56700971 Msa0171870:CDS 40.0%
! AGGCAGAATGTGATGGAATT+GGG + chr1_4:56700959-56700978 Msa0171870:CDS 40.0%
GCATGTTAGGATGCTTACTA+GGG + chr1_4:56701024-56701043 Msa0171870:CDS 40.0%
GGATGCTTACTAGGGAAATT+AGG + chr1_4:56701032-56701051 Msa0171870:CDS 40.0%
!! TGTTGAGCTTTCTAAGGCTT+TGG + chr1_4:56701093-56701112 Msa0171870:CDS 40.0%
TTTGGATGCCGAATGATGAT+AGG + chr1_4:56701134-56701153 Msa0171870:CDS 40.0%
TCCTTATCTCCAACACATCA+GGG - chr1_4:56701237-56701256 None:intergenic 40.0%
TTCCTTATCTCCAACACATC+AGG - chr1_4:56701238-56701257 None:intergenic 40.0%
! CTAAAGGGGTTAGGATTTTG+AGG + chr1_4:56701260-56701279 Msa0171870:CDS 40.0%
TTGAGGCCTGAATCTAAACT+AGG + chr1_4:56701277-56701296 Msa0171870:CDS 40.0%
GCAACTCCTAGTTTAGATTC+AGG - chr1_4:56701286-56701305 None:intergenic 40.0%
!!! AGTTTTGGTTCTTCCAGGTT+CGG + chr1_4:56701429-56701448 Msa0171870:CDS 40.0%
! TTTGAGACTGTTGCAATGCT+CGG - chr1_4:56701585-56701604 None:intergenic 40.0%
GGTGACACAATGTTGAAAGT+CGG + chr1_4:56701745-56701764 Msa0171870:CDS 40.0%
TCCTTCTACATTCCATGTTG+AGG + chr1_4:56701851-56701870 Msa0171870:CDS 40.0%
CCTTCTACATTCCATGTTGA+GGG + chr1_4:56701852-56701871 Msa0171870:CDS 40.0%
AAGTGCTTGTGTGTGTATCA+AGG + chr1_4:56701892-56701911 Msa0171870:CDS 40.0%
AGTGCTTGTGTGTGTATCAA+GGG + chr1_4:56701893-56701912 Msa0171870:CDS 40.0%
TTGTGTGTGTATCAAGGGTT+TGG + chr1_4:56701898-56701917 Msa0171870:CDS 40.0%
!! TCGTCGCCTAAAACTTTTTC+AGG - chr1_4:56701952-56701971 None:intergenic 40.0%
!!! ACCGAGGGAATCTTGTTTTT+CGG + chr1_4:56702028-56702047 Msa0171870:CDS 40.0%
! TCGGGTTTTTGTTACAAGTG+AGG + chr1_4:56702047-56702066 Msa0171870:CDS 40.0%
! CGGGTTTTTGTTACAAGTGA+GGG + chr1_4:56702048-56702067 Msa0171870:CDS 40.0%
! GTTTTTGTTACAAGTGAGGG+TGG + chr1_4:56702051-56702070 Msa0171870:CDS 40.0%
CAACGAAACAACAGATTGGT+AGG + chr1_4:56702187-56702206 Msa0171870:CDS 40.0%
TCACAACAGTGAATCTAAGG+AGG + chr1_4:56702218-56702237 Msa0171870:CDS 40.0%
CACAACAGTGAATCTAAGGA+GGG + chr1_4:56702219-56702238 Msa0171870:CDS 40.0%
TGTTGACCTGCATCTTCATT+TGG + chr1_4:56702412-56702431 Msa0171870:intron 40.0%
GTTGACCTGCATCTTCATTT+GGG + chr1_4:56702413-56702432 Msa0171870:intron 40.0%
TTGATCCCAAATGAAGATGC+AGG - chr1_4:56702421-56702440 None:intergenic 40.0%
GCAACAGATCAGTTATTGGT+CGG - chr1_4:56702615-56702634 None:intergenic 40.0%
ACCAATAACTGATCTGTTGC+AGG + chr1_4:56702615-56702634 Msa0171870:intron 40.0%
!!! AAGCTATTTTTCCCCCATGT+TGG + chr1_4:56702913-56702932 Msa0171870:intron 40.0%
! TATTTTTCCCCCATGTTGGA+AGG + chr1_4:56702917-56702936 Msa0171870:intron 40.0%
AAAAGGATCCTTCCAACATG+GGG - chr1_4:56702928-56702947 None:intergenic 40.0%
CAAAAGGATCCTTCCAACAT+GGG - chr1_4:56702929-56702948 None:intergenic 40.0%
TCAAAAGGATCCTTCCAACA+TGG - chr1_4:56702930-56702949 None:intergenic 40.0%
AAAGCAGATTCTGACATGAC+AGG + chr1_4:56703022-56703041 Msa0171870:intron 40.0%
GGCATCATTAGAGAAACATG+AGG + chr1_4:56703043-56703062 Msa0171870:intron 40.0%
ACACAGAAACTGCATGATTG+TGG + chr1_4:56703075-56703094 Msa0171870:intron 40.0%
!! CTTGTTATTCCCTTGCCTAT+TGG + chr1_4:56703396-56703415 Msa0171870:intron 40.0%
ATTACCAAACTCTCAGGGTT+TGG + chr1_4:56703548-56703567 Msa0171870:CDS 40.0%
CATCTGCTAGCAAAATCTTG+AGG - chr1_4:56703671-56703690 None:intergenic 40.0%
CTAGTAACAGCAGTTTCATC+AGG + chr1_4:56703744-56703763 Msa0171870:CDS 40.0%
AGACATTCACATGCCTGAAA+TGG + chr1_4:56703827-56703846 Msa0171870:CDS 40.0%
ATTCACATGCCTGAAATGGA+TGG + chr1_4:56703831-56703850 Msa0171870:CDS 40.0%
!!! AATGGATGGTTTTGAAGTGG+CGG + chr1_4:56703845-56703864 Msa0171870:CDS 40.0%
GCAAGGATCAGGAAATTCAA+TGG + chr1_4:56703867-56703886 Msa0171870:CDS 40.0%
GGAAATTCAATGGCCCTAAT+TGG + chr1_4:56703877-56703896 Msa0171870:CDS 40.0%
GCTATGATCAAAGGCCAATT+AGG - chr1_4:56703894-56703913 None:intergenic 40.0%
AGTTAAGGATAGATGCATGC+TGG + chr1_4:56703938-56703957 Msa0171870:CDS 40.0%
AATCCTCCTTCATCAGATAG+CGG + chr1_4:56703989-56704008 Msa0171870:CDS 40.0%
!! GATAGCGGATGAACTTAGAT+CGG + chr1_4:56704004-56704023 Msa0171870:CDS 40.0%
CCATAATGCAACCACAATCA+TGG - chr1_4:56704246-56704265 None:intergenic 40.0%
CCATGATTGTGGTTGCATTA+TGG + chr1_4:56704243-56704262 Msa0171870:three_prime_UTR 40.0%
GACTGGGATAATGATGGTTA+TGG - chr1_4:56704328-56704347 None:intergenic 40.0%
AGGTAAATCTGCAACTCCGT+GGG + chr1_4:56700196-56700215 Msa0171870:five_prime_UTR 45.0%
CTAAGAAGGAGAGGGATCAA+CGG - chr1_4:56700914-56700933 None:intergenic 45.0%
! AGGTGAGGGAGATTTTCTTG+AGG + chr1_4:56700939-56700958 Msa0171870:CDS 45.0%
! GAGGCAGAATGTGATGGAAT+TGG + chr1_4:56700958-56700977 Msa0171870:CDS 45.0%
! GGCAGAATGTGATGGAATTG+GGG + chr1_4:56700960-56700979 Msa0171870:CDS 45.0%
ATGGAATTGGGGCAAGAAGT+TGG + chr1_4:56700971-56700990 Msa0171870:CDS 45.0%
TGGAATTGGGGCAAGAAGTT+GGG + chr1_4:56700972-56700991 Msa0171870:CDS 45.0%
AGGAAGCTAGTTGGCATGTT+AGG + chr1_4:56701011-56701030 Msa0171870:CDS 45.0%
GGCATGTTAGGATGCTTACT+AGG + chr1_4:56701023-56701042 Msa0171870:CDS 45.0%
AACACATCAGGGTCAATCAC+AGG - chr1_4:56701226-56701245 None:intergenic 45.0%
TGTGATTGACCCTGATGTGT+TGG + chr1_4:56701225-56701244 Msa0171870:CDS 45.0%
ACCCTGATGTGTTGGAGATA+AGG + chr1_4:56701233-56701252 Msa0171870:CDS 45.0%
AAACTAGGAGTTGCGAGTAG+TGG + chr1_4:56701292-56701311 Msa0171870:CDS 45.0%
! AACTATCTCCATCTCTGGAG+CGG - chr1_4:56701470-56701489 None:intergenic 45.0%
TCCAGAGATGGAGATAGTTG+AGG + chr1_4:56701471-56701490 Msa0171870:CDS 45.0%
ACCTCAACTATCTCCATCTC+TGG - chr1_4:56701475-56701494 None:intergenic 45.0%
AGAGATGGAGATAGTTGAGG+TGG + chr1_4:56701474-56701493 Msa0171870:CDS 45.0%
GTCTCAAAAGAACGCGATGA+TGG + chr1_4:56701597-56701616 Msa0171870:CDS 45.0%
! TTTGGAATGACTTCCTAGCC+TGG - chr1_4:56701627-56701646 None:intergenic 45.0%
TTCCAAACAGTGATGAGCCA+TGG + chr1_4:56701640-56701659 Msa0171870:CDS 45.0%
AGGCCAATGCATTCAGTTGT+GGG + chr1_4:56701670-56701689 Msa0171870:CDS 45.0%
ATCCCCACAACTGAATGCAT+TGG - chr1_4:56701676-56701695 None:intergenic 45.0%
CCCTCAACATGGAATGTAGA+AGG - chr1_4:56701855-56701874 None:intergenic 45.0%
CAAGCACTTAGCAATGCAAG+CGG - chr1_4:56701881-56701900 None:intergenic 45.0%
!!! AAGTTTTAGGCGACGAAGCA+AGG + chr1_4:56701956-56701975 Msa0171870:CDS 45.0%
CCCGAAAAACAAGATTCCCT+CGG - chr1_4:56702032-56702051 None:intergenic 45.0%
!!! CCGAGGGAATCTTGTTTTTC+GGG + chr1_4:56702029-56702048 Msa0171870:CDS 45.0%
TACAAGTGAGGGTGGTGATA+AGG + chr1_4:56702059-56702078 Msa0171870:CDS 45.0%
CGAAACAACAGATTGGTAGG+AGG + chr1_4:56702190-56702209 Msa0171870:CDS 45.0%
GCTTGAGCTTCAATATGTGC+CGG + chr1_4:56702241-56702260 Msa0171870:CDS 45.0%
TCTCATATGAGGTGCATGTG+AGG + chr1_4:56702587-56702606 Msa0171870:intron 45.0%
CTCATATGAGGTGCATGTGA+GGG + chr1_4:56702588-56702607 Msa0171870:intron 45.0%
GCCTGCAACAGATCAGTTAT+TGG - chr1_4:56702619-56702638 None:intergenic 45.0%
TCCTTGACCTTCTAGTCAGA+TGG + chr1_4:56702682-56702701 Msa0171870:intron 45.0%
AAAGGATCCTTCCAACATGG+GGG - chr1_4:56702927-56702946 None:intergenic 45.0%
CCAGGATATGCTCCTAAAAG+AGG - chr1_4:56702993-56703012 None:intergenic 45.0%
!! CCTCTTTTAGGAGCATATCC+TGG + chr1_4:56702990-56703009 Msa0171870:intron 45.0%
!!! ATCTGCTTTTTCGACTAGCC+AGG - chr1_4:56703011-56703030 None:intergenic 45.0%
!!! AGCTTGTGCTTTTTGGGGTT+AGG + chr1_4:56703210-56703229 Msa0171870:intron 45.0%
!!! TTGTGCTTTTTGGGGTTAGG+TGG + chr1_4:56703213-56703232 Msa0171870:intron 45.0%
!!! TGTGCTTTTTGGGGTTAGGT+GGG + chr1_4:56703214-56703233 Msa0171870:intron 45.0%
TGACAAAGAAGCTACTCGAG+AGG + chr1_4:56703712-56703731 Msa0171870:CDS 45.0%
CTGGAATGAATGGTGTGATC+CGG + chr1_4:56703961-56703980 Msa0171870:CDS 45.0%
!! GATGAAGGAGGATTGGTTTC+CGG - chr1_4:56703983-56704002 None:intergenic 45.0%
GCTATCTGATGAAGGAGGAT+TGG - chr1_4:56703990-56704009 None:intergenic 45.0%
GTTCATCCGCTATCTGATGA+AGG - chr1_4:56703998-56704017 None:intergenic 45.0%
! GTTTTTCACCTGCACGAAGT+AGG - chr1_4:56704031-56704050 None:intergenic 45.0%
GACTCTGACTGGGATAATGA+TGG - chr1_4:56704334-56704353 None:intergenic 45.0%
TCGTACTGTGCATCCTCCTT+GGG - chr1_4:56700177-56700196 None:intergenic 50.0%
GAGGTAAATCTGCAACTCCG+TGG + chr1_4:56700195-56700214 Msa0171870:five_prime_UTR 50.0%
AGAAAGGAAAGTGGGTCCCA+CGG - chr1_4:56700215-56700234 None:intergenic 50.0%
TGCTCTTGTGTCGTGTGCAA+CGG + chr1_4:56700874-56700893 Msa0171870:CDS 50.0%
GAATTTCAAAGGAGGGACGC+CGG + chr1_4:56701378-56701397 Msa0171870:CDS 50.0%
TTCTTCCAGGTTCGGACTCT+AGG + chr1_4:56701437-56701456 Msa0171870:CDS 50.0%
TCTTCCAGGTTCGGACTCTA+GGG + chr1_4:56701438-56701457 Msa0171870:CDS 50.0%
GATGGAGATAGTTGAGGTGG+TGG + chr1_4:56701477-56701496 Msa0171870:CDS 50.0%
GTCCATGGCTCATCACTGTT+TGG - chr1_4:56701645-56701664 None:intergenic 50.0%
GAGGCCAATGCATTCAGTTG+TGG + chr1_4:56701669-56701688 Msa0171870:CDS 50.0%
GGCCAATGCATTCAGTTGTG+GGG + chr1_4:56701671-56701690 Msa0171870:CDS 50.0%
TGAGCTTCAATATGTGCCGG+AGG + chr1_4:56702244-56702263 Msa0171870:CDS 50.0%
CTTCAATATGTGCCGGAGGT+TGG + chr1_4:56702248-56702267 Msa0171870:CDS 50.0%
GCCATCTGACTAGAAGGTCA+AGG - chr1_4:56702686-56702705 None:intergenic 50.0%
GTGGTTGCCATCTGACTAGA+AGG - chr1_4:56702692-56702711 None:intergenic 50.0%
AAGAGTCTCGACACAACGGT+TGG - chr1_4:56702716-56702735 None:intergenic 50.0%
ATTCCCTTGCCTATTGGTCC+AGG + chr1_4:56703402-56703421 Msa0171870:intron 50.0%
ACTCCTGGACCAATAGGCAA+GGG - chr1_4:56703408-56703427 None:intergenic 50.0%
TATTTCGTACAGGCCACTCC+TGG - chr1_4:56703423-56703442 None:intergenic 50.0%
AGGAGTGGCCTGTACGAAAT+AGG + chr1_4:56703422-56703441 Msa0171870:intron 50.0%
ACACAGGGCCTATTTCGTAC+AGG - chr1_4:56703433-56703452 None:intergenic 50.0%
TGCACCAAACCCTGAGAGTT+TGG - chr1_4:56703555-56703574 None:intergenic 50.0%
!! AACTCTCAGGGTTTGGTGCA+AGG + chr1_4:56703555-56703574 Msa0171870:CDS 50.0%
AAAGAAGCTACTCGAGAGGC+TGG + chr1_4:56703716-56703735 Msa0171870:CDS 50.0%
AAGAAGCTACTCGAGAGGCT+GGG + chr1_4:56703717-56703736 Msa0171870:CDS 50.0%
TTCATCAGGGTTTGAGTGCC+TGG + chr1_4:56703758-56703777 Msa0171870:CDS 50.0%
TCATCAGGGTTTGAGTGCCT+GGG + chr1_4:56703759-56703778 Msa0171870:CDS 50.0%
!!! ATGGTTTTGAAGTGGCGGCA+AGG + chr1_4:56703850-56703869 Msa0171870:CDS 50.0%
AAGGATAGATGCATGCTGGC+TGG + chr1_4:56703942-56703961 Msa0171870:CDS 50.0%
! TGCATGCTGGCTGGAATGAA+TGG + chr1_4:56703951-56703970 Msa0171870:CDS 50.0%
CATCCGCTATCTGATGAAGG+AGG - chr1_4:56703995-56704014 None:intergenic 50.0%
TTGTGCTGTGGCCATGATTG+TGG + chr1_4:56704232-56704251 Msa0171870:three_prime_UTR 50.0%
TTTGACAAGGTCGAGGCCCA+AGG + chr1_4:56700158-56700177 Msa0171870:five_prime_UTR 55.0%
CTCGTACTGTGCATCCTCCT+TGG - chr1_4:56700178-56700197 None:intergenic 55.0%
CAAGGAGGATGCACAGTACG+AGG + chr1_4:56700176-56700195 Msa0171870:five_prime_UTR 55.0%
CACACGACACAAGAGCAGTG+AGG - chr1_4:56700871-56700890 None:intergenic 55.0%
AGAAGGAGAGGGATCAACGG+CGG - chr1_4:56700911-56700930 None:intergenic 55.0%
CTAGGAGTTGCGAGTAGTGG+CGG + chr1_4:56701295-56701314 Msa0171870:CDS 55.0%
CAAACCCTAGAGTCCGAACC+TGG - chr1_4:56701445-56701464 None:intergenic 55.0%
!! CAGGTTCGGACTCTAGGGTT+TGG + chr1_4:56701443-56701462 Msa0171870:CDS 55.0%
! AGTTGAGGTGGTGGCTGATC+AGG + chr1_4:56701486-56701505 Msa0171870:CDS 55.0%
GAGAACCGACGCGTGAGAAA+GGG - chr1_4:56701521-56701540 None:intergenic 55.0%
GAATGACTTCCTAGCCTGGC+TGG - chr1_4:56701623-56701642 None:intergenic 55.0%
! CAGTGATGAGCCATGGACTG+AGG + chr1_4:56701647-56701666 Msa0171870:CDS 55.0%
! TGATGAGCCATGGACTGAGG+AGG + chr1_4:56701650-56701669 Msa0171870:CDS 55.0%
TTGTTGAACACGCGTGACCG+AGG + chr1_4:56702012-56702031 Msa0171870:CDS 55.0%
TGTTGAACACGCGTGACCGA+GGG + chr1_4:56702013-56702032 Msa0171870:CDS 55.0%
!! TATGTGCCGGAGGTTGGTAC+AGG + chr1_4:56702254-56702273 Msa0171870:CDS 55.0%
CACCTACCTGTACCAACCTC+CGG - chr1_4:56702263-56702282 None:intergenic 55.0%
TCTCGACACAACGGTTGGAG+TGG - chr1_4:56702711-56702730 None:intergenic 55.0%
CACTCCTGGACCAATAGGCA+AGG - chr1_4:56703409-56703428 None:intergenic 55.0%
CTTGCCTATTGGTCCAGGAG+TGG + chr1_4:56703407-56703426 Msa0171870:intron 55.0%
! GAGTGCCTGGGTGCTATAAG+TGG + chr1_4:56703771-56703790 Msa0171870:CDS 55.0%
CAGAGCCACTTATAGCACCC+AGG - chr1_4:56703779-56703798 None:intergenic 55.0%
! CTGGGTGCTATAAGTGGCTC+TGG + chr1_4:56703777-56703796 Msa0171870:CDS 55.0%
!! GGTGCTATAAGTGGCTCTGG+TGG + chr1_4:56703780-56703799 Msa0171870:CDS 55.0%
TTGAAGTGGCGGCAAGGATC+AGG + chr1_4:56703856-56703875 Msa0171870:CDS 55.0%
AGATCGGTCCTACTTCGTGC+AGG + chr1_4:56704020-56704039 Msa0171870:CDS 55.0%
GAGTTGCGAGTAGTGGCGGT+GGG + chr1_4:56701299-56701318 Msa0171870:CDS 60.0%
AGTTGCGAGTAGTGGCGGTG+GGG + chr1_4:56701300-56701319 Msa0171870:CDS 60.0%
!! GGTGGGGGTACTGAGGAGTT+GGG + chr1_4:56701316-56701335 Msa0171870:CDS 60.0%
! TGAGGAGTTGGGTGCTGTCG+CGG + chr1_4:56701327-56701346 Msa0171870:CDS 60.0%
GGTTTGGACCGCTCCAGAGA+TGG + chr1_4:56701459-56701478 Msa0171870:CDS 60.0%
! TGAGGTGGTGGCTGATCAGG+TGG + chr1_4:56701489-56701508 Msa0171870:CDS 60.0%
CGACGCGTGAGAAAGGGCTA+CGG - chr1_4:56701515-56701534 None:intergenic 60.0%
CGTAGCCCTTTCTCACGCGT+CGG + chr1_4:56701513-56701532 Msa0171870:CDS 60.0%
CGAGAACCGACGCGTGAGAA+AGG - chr1_4:56701522-56701541 None:intergenic 60.0%
! GCATTGGCCTCCTCAGTCCA+TGG - chr1_4:56701660-56701679 None:intergenic 60.0%
GCAAGCGGCTTCCCTCAACA+TGG - chr1_4:56701866-56701885 None:intergenic 60.0%
!! TGCCGGAGGTTGGTACAGGT+AGG + chr1_4:56702258-56702277 Msa0171870:intron 60.0%
CAGGCCACTCCTGGACCAAT+AGG - chr1_4:56703414-56703433 None:intergenic 60.0%
GACAAGGTCGAGGCCCAAGG+AGG + chr1_4:56700161-56700180 Msa0171870:five_prime_UTR 65.0%
GGAGTTGCGAGTAGTGGCGG+TGG + chr1_4:56701298-56701317 Msa0171870:CDS 65.0%
GTTGCGAGTAGTGGCGGTGG+GGG + chr1_4:56701301-56701320 Msa0171870:CDS 65.0%
!! TAGTGGCGGTGGGGGTACTG+AGG + chr1_4:56701309-56701328 Msa0171870:CDS 65.0%
!! CGGTGGGGGTACTGAGGAGT+TGG + chr1_4:56701315-56701334 Msa0171870:CDS 65.0%
CAAAGGAGGGACGCCGGAGT+TGG + chr1_4:56701384-56701403 Msa0171870:CDS 65.0%
! GAACGCGATGATGGCCAGCC+AGG + chr1_4:56701606-56701625 Msa0171870:CDS 65.0%
! CGATGATGGCCAGCCAGGCT+AGG + chr1_4:56701611-56701630 Msa0171870:CDS 65.0%
Chromosome Type Strat End Strand Name
chr1_4 gene 56700113 56704431 56700113 ID=Msa0171870;Name=Msa0171870
chr1_4 mRNA 56700113 56704431 56700113 ID=Msa0171870-mRNA-1;Parent=Msa0171870;Name=Msa0171870-mRNA-1;_AED=0.02;_eAED=0.02;_QI=399|1|1|1|1|1|2|376|764
chr1_4 exon 56700113 56702275 56700113 ID=Msa0171870-mRNA-1:exon:17187;Parent=Msa0171870-mRNA-1
chr1_4 exon 56703525 56704431 56703525 ID=Msa0171870-mRNA-1:exon:17188;Parent=Msa0171870-mRNA-1
chr1_4 five_prime_UTR 56700113 56700511 56700113 ID=Msa0171870-mRNA-1:five_prime_utr;Parent=Msa0171870-mRNA-1
chr1_4 CDS 56700512 56702275 56700512 ID=Msa0171870-mRNA-1:cds;Parent=Msa0171870-mRNA-1
chr1_4 CDS 56703525 56704055 56703525 ID=Msa0171870-mRNA-1:cds;Parent=Msa0171870-mRNA-1
chr1_4 three_prime_UTR 56704056 56704431 56704056 ID=Msa0171870-mRNA-1:three_prime_utr;Parent=Msa0171870-mRNA-1
Gene Sequence

>Msa0171870

ATGAAAACTAAAACTTTTATTCTGTTGTTATTGTTTTTTAATCTTACTCTTTATGCTTCTGCTACTGATTCTGATGAATATGACCACTGTAACTGTGATGATGAAGAAGCACTTTTCAGCATACATACAATCCTTGTTGGTCAAAAAGTCAGTGATTTTTTCATTGCAATTGCATATTTTTCAATACCAATTGAGCTTCTTTACTTTGTTAGTCGTTCAAATGTTCCTTTCAAATTGCTGTTTCTTCAATTCATAGCCTTCATAGTTCTATGTGGTATGACTCATTTACTCAATGCTTATTCTTATCATAGTCATCCTTCTTTTCAACTCTTGCTTTCCCTTACTGTTGCTAAATTCCTCACTGCTCTTGTGTCGTGTGCAACGGCATTGACACTTCCGCCGTTGATCCCTCTCCTTCTTAGAATTAAGGTGAGGGAGATTTTCTTGAGGCAGAATGTGATGGAATTGGGGCAAGAAGTTGGGATTATGAAGAAACAAAAGGAAGCTAGTTGGCATGTTAGGATGCTTACTAGGGAAATTAGGAAGTCTCTTGATAAACATACAATTTTGTATACTACTCTTGTTGAGCTTTCTAAGGCTTTGGATTTGCATAATTGTGCTGTTTGGATGCCGAATGATGATAGGAGAGAGATGTATTTGACTCATGAATTGAAATCGGATTCGGGTAAGAGTTTTCATCATAATTCTATTCCTGTGATTGACCCTGATGTGTTGGAGATAAGGAAAACTAAAGGGGTTAGGATTTTGAGGCCTGAATCTAAACTAGGAGTTGCGAGTAGTGGCGGTGGGGGTACTGAGGAGTTGGGTGCTGTCGCGGCTATTCGTATGCCGATGCTTCATGTTTCGAATTTCAAAGGAGGGACGCCGGAGTTGGTTGATACATGTTATGCTATACTAGTTTTGGTTCTTCCAGGTTCGGACTCTAGGGTTTGGACCGCTCCAGAGATGGAGATAGTTGAGGTGGTGGCTGATCAGGTGGCCGTAGCCCTTTCTCACGCGTCGGTTCTCGAAGAGTCTTATTTAATGAGAGAGAAACTCGAAGAGCAAAACCGAGCATTGCAACAGTCTCAAAAGAACGCGATGATGGCCAGCCAGGCTAGGAAGTCATTCCAAACAGTGATGAGCCATGGACTGAGGAGGCCAATGCATTCAGTTGTGGGGATGCTTTCATTGTTTCAAGAGGGTAATATGAGGACTGAACAAAAGATTATTGGTGACACAATGTTGAAAGTCGGCAATGTGCTCTCGAGTTTAGTAAACGATGTAATGGATATCTCTGAAAATAAAAAGGGTGGCCTTCAGTTAGAGATGAAACCTTTCCTTCTACATTCCATGTTGAGGGAAGCCGCTTGCATTGCTAAGTGCTTGTGTGTGTATCAAGGGTTTGGTTTTCAAATTGATGTCGAAAAGTCTTTGCCTGAAAAAGTTTTAGGCGACGAAGCAAGGACTTTTCAAGTAATTATGCATATTATTGGCTATTTGTTGAACACGCGTGACCGAGGGAATCTTGTTTTTCGGGTTTTTGTTACAAGTGAGGGTGGTGATAAGGATGACAAAAAATTTGGTGTATGGAGATCGAGCAGCCCAGTTGAGTATGTAGACATAAAATTTGATTTTCAGATTACTGGTAGTTCTCAGTCAGATGAACCGATTTCAACGAAACAACAGATTGGTAGGAGGCTGAATCACAACAGTGAATCTAAGGAGGGCTTGAGCTTCAATATGTGCCGGAGGTTGGTACAGATAATGCAAGGTAATATATGGATATTACCAAACTCTCAGGGTTTGGTGCAAGGCGTGTCACTTCTTCTAAAGTTTCAGATAGGACCATCGCTTGAAAGATACATGTTTGCACCTAAAGATTATTCAAATTCACAGTTTGGAGGCCTCAAGATTTTGCTAGCAGATGATGATAGTTTAAATAGGATCGTGACAAAGAAGCTACTCGAGAGGCTGGGCTGTCTAGTAACAGCAGTTTCATCAGGGTTTGAGTGCCTGGGTGCTATAAGTGGCTCTGGTGGTAACTCATTCAAAATTATCATGTTAGACATTCACATGCCTGAAATGGATGGTTTTGAAGTGGCGGCAAGGATCAGGAAATTCAATGGCCCTAATTGGCCTTTGATCATAGCTCTTATAGCTAATGCAGAAGAGCAAGTTAAGGATAGATGCATGCTGGCTGGAATGAATGGTGTGATCCGGAAACCAATCCTCCTTCATCAGATAGCGGATGAACTTAGATCGGTCCTACTTCGTGCAGGTGAAAAACTGTGA
Protein sequence

>Msa0171870

MKTKTFILLLLFFNLTLYASATDSDEYDHCNCDDEEALFSIHTILVGQKVSDFFIAIAYFSIPIELLYFVSRSNVPFKLLFLQFIAFIVLCGMTHLLNAYSYHSHPSFQLLLSLTVAKFLTALVSCATALTLPPLIPLLLRIKVREIFLRQNVMELGQEVGIMKKQKEASWHVRMLTREIRKSLDKHTILYTTLVELSKALDLHNCAVWMPNDDRREMYLTHELKSDSGKSFHHNSIPVIDPDVLEIRKTKGVRILRPESKLGVASSGGGGTEELGAVAAIRMPMLHVSNFKGGTPELVDTCYAILVLVLPGSDSRVWTAPEMEIVEVVADQVAVALSHASVLEESYLMREKLEEQNRALQQSQKNAMMASQARKSFQTVMSHGLRRPMHSVVGMLSLFQEGNMRTEQKIIGDTMLKVGNVLSSLVNDVMDISENKKGGLQLEMKPFLLHSMLREAACIAKCLCVYQGFGFQIDVEKSLPEKVLGDEARTFQVIMHIIGYLLNTRDRGNLVFRVFVTSEGGDKDDKKFGVWRSSSPVEYVDIKFDFQITGSSQSDEPISTKQQIGRRLNHNSESKEGLSFNMCRRLVQIMQGNIWILPNSQGLVQGVSLLLKFQIGPSLERYMFAPKDYSNSQFGGLKILLADDDSLNRIVTKKLLERLGCLVTAVSSGFECLGAISGSGGNSFKIIMLDIHMPEMDGFEVAARIRKFNGPNWPLIIALIANAEEQVKDRCMLAGMNGVIRKPILLHQIADELRSVLLRAGEKL*