AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0758590

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0758590 MtrunA17_Chr5g0406641 96.048 835 32 1 1 834 1 835 0.0 1652
Msa0758590 MtrunA17_Chr6g0484831 95.569 835 37 0 1 835 1 835 0.0 1625
Msa0758590 MtrunA17_Chr7g0215341 90.060 835 75 2 1 835 1 827 0.0 1509
Msa0758590 MtrunA17_Chr4g0007641 80.024 846 155 5 1 835 1 843 0.0 1379
Msa0758590 MtrunA17_Chr6g0464681 68.930 869 193 9 1 835 1 826 0.0 1178
Msa0758590 MtrunA17_Chr6g0486931 53.118 834 364 10 9 819 88 917 0.0 875
Msa0758590 MtrunA17_Chr8g0369361 50.258 774 362 8 60 818 9 774 0.0 782
Msa0758590 MtrunA17_Chr5g0427891 58.309 343 142 1 477 819 1 342 2.81e-137 411
Msa0758590 MtrunA17_Chr2g0302601 34.048 373 208 8 437 802 1215 1556 1.08e-55 209
Msa0758590 MtrunA17_Chr6g0477371 34.048 373 208 8 437 802 1206 1547 2.10e-54 205
Msa0758590 MtrunA17_Chr4g0017221 33.780 373 209 8 437 802 1190 1531 5.96e-54 203
Msa0758590 MtrunA17_Chr8g0364091 45.109 184 89 6 121 293 30 212 1.36e-39 147
Msa0758590 MtrunA17_Chr8g0364111 74.242 66 17 0 753 818 3 68 1.14e-27 107
Msa0758590 MtrunA17_Chr5g0427871 47.115 104 46 2 60 154 38 141 7.76e-23 95.5
Msa0758590 MtrunA17_Chr5g0427881 60.938 64 25 0 389 452 40 103 3.75e-22 92.0
Msa0758590 MtrunA17_Chr3g0087051 36.196 163 84 5 646 802 2 150 2.04e-20 89.0
Msa0758590 MtrunA17_Chr2g0306841 36.364 88 56 0 552 639 15 102 1.79e-13 67.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0758590 AT1G69770.1 52.682 839 358 12 1 815 1 824 0.0 834
Msa0758590 AT1G80740.1 50.805 807 347 9 43 822 2 785 0.0 812
Msa0758590 AT4G19020.1 51.166 772 355 5 58 818 521 1281 0.0 804
Msa0758590 AT4G19020.2 51.166 772 355 5 58 818 473 1233 0.0 803
Msa0758590 AT4G14140.3 35.753 372 197 10 433 795 1164 1502 1.20e-56 212
Msa0758590 AT4G14140.1 35.753 372 197 10 433 795 1164 1502 1.20e-56 212
Msa0758590 AT4G14140.2 35.753 372 197 10 433 795 1190 1528 2.14e-56 211
Msa0758590 AT4G08990.1 35.484 372 198 10 433 795 1157 1495 5.43e-55 207
Msa0758590 AT4G13610.1 33.687 377 202 8 433 803 1066 1400 8.79e-53 200
Msa0758590 AT5G49160.2 33.245 379 213 11 433 803 1091 1437 5.32e-51 195
Msa0758590 AT5G49160.1 33.245 379 213 11 433 803 1179 1525 6.57e-51 194

Find 210 sgRNAs with CRISPR-Local

Find 412 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GAAATTTGCTGGTGGGTTTC+TGG 0.008640 5_2:+13925767 Msa0758590:CDS
TGCTTTGGAGCGTCTATTTC+TGG 0.092776 5_2:+13924487 Msa0758590:CDS
ACTTTACTGGATTTGTATTC+TGG 0.102309 5_2:+13924439 Msa0758590:CDS
CCAAAACATACGTGTGTTTC+TGG 0.107116 5_2:-13924682 None:intergenic
TTCAACCCGCTCAGTGTAAA+TGG 0.259279 5_2:-13922407 None:intergenic
GAAGCTTGAGTGGACTTTAC+TGG 0.259994 5_2:+13924426 Msa0758590:CDS
AGATATGATACCTTCTTCTT+TGG 0.269464 5_2:-13926952 None:intergenic
TTCCAGGGCCTGAATATTCT+TGG 0.283452 5_2:-13928571 None:intergenic
TAGACAACTTGGGTACTTAA+AGG 0.288833 5_2:-13928445 None:intergenic
CATTCGAGCTTGATAATTCA+TGG 0.289914 5_2:-13925817 None:intergenic
TCTTCTTCAACGGGATTAAC+AGG 0.302292 5_2:-13922699 None:intergenic
ATAGAAAACTCACTCGTTCT+TGG 0.312461 5_2:-13922850 None:intergenic
ATGATTTAATATTCACATTT+CGG 0.318121 5_2:+13928598 Msa0758590:three_prime_UTR
AGGAACGACGTCGTCTTGTT+TGG 0.324105 5_2:-13922643 None:intergenic
TGAAGTCTCGCTTTCTATTA+TGG 0.324543 5_2:-13924317 None:intergenic
AAATTTGCTGGTGGGTTTCT+GGG 0.327523 5_2:+13925768 Msa0758590:CDS
TTCAATATTTACAGTGTCTT+CGG 0.334695 5_2:-13923805 None:intergenic
ATCCTTTAGATTGTTTAGTT+AGG 0.347736 5_2:+13923971 Msa0758590:CDS
CTAAGAACTCTGTCTTGTTC+TGG 0.348365 5_2:-13927705 None:intergenic
CATATGGCCTTCCTCAATTT+CGG 0.349601 5_2:+13925859 Msa0758590:CDS
CCACCTTGTCAAGGTGTTAG+TGG 0.350266 5_2:+13925615 Msa0758590:CDS
ATGTCCACTGGCCTTTGCTT+TGG 0.354478 5_2:+13924472 Msa0758590:CDS
ACAAATGTCATTGCATAATC+TGG 0.361080 5_2:-13927235 None:intergenic
CTTTACTGGATTTGTATTCT+GGG 0.362248 5_2:+13924440 Msa0758590:CDS
CCAGACTGCTATAAGCTTTG+CGG 0.364307 5_2:+13927759 Msa0758590:CDS
TTAGTGGTTTCAATCGCTTC+AGG 0.364770 5_2:+13925631 Msa0758590:CDS
ATCCTCAAGGTTTAATGCCT+TGG 0.368420 5_2:-13926248 None:intergenic
GTTCCTGTGGCCCTTGCCCT+TGG 0.369274 5_2:+13928363 Msa0758590:CDS
GGGCTCCCATGTATCATAAC+TGG 0.370498 5_2:-13925162 None:intergenic
CACTGAGCGGGTTGAAGTGC+CGG 0.383051 5_2:+13922414 Msa0758590:five_prime_UTR
TTCGCTTTCTTTCTTCTAGA+AGG 0.383626 5_2:-13922738 None:intergenic
TGAGCTTCATCGGCCGGAAT+AGG 0.388189 5_2:-13922804 None:intergenic
TTCCTAACTAAACAATCTAA+AGG 0.391710 5_2:-13923973 None:intergenic
AACACATACCTCTGTTTGAC+AGG 0.396020 5_2:-13927783 None:intergenic
TCCCATCAACCTTCGCTTCA+CGG 0.396234 5_2:-13922992 None:intergenic
ATATTAAATCATACAATTCC+AGG 0.396940 5_2:-13928587 None:intergenic
GAAAGAGTGCATCTAAAATC+TGG 0.397497 5_2:+13927120 Msa0758590:CDS
CTTCGTTGGAGAACCTATTC+CGG 0.399606 5_2:+13922791 Msa0758590:CDS
AGACAACTTGGGTACTTAAA+GGG 0.412259 5_2:-13928444 None:intergenic
TCTAAAATCTGGAAAGCCTT+TGG 0.417831 5_2:+13927131 Msa0758590:CDS
TCAACACTTTCAAGTGAATC+CGG 0.418845 5_2:+13924337 Msa0758590:CDS
GTAAAATATTGTTCTTCCTC+AGG 0.419858 5_2:-13923762 None:intergenic
AAGGGCCGAGCCTCATAATC+AGG 0.420289 5_2:+13927415 Msa0758590:CDS
TGTTAGGAGAAGAGAGAAGA+AGG 0.420899 5_2:-13922557 None:intergenic
CATCAACTACATCTAAAGAA+TGG 0.427040 5_2:-13928470 None:intergenic
ATCCGACTCTGAGGTATTTG+AGG 0.427400 5_2:+13924965 Msa0758590:CDS
ATGATGGCTGCAGGGTCATA+TGG 0.428980 5_2:+13925843 Msa0758590:CDS
CTTGCCCTTGGATACACATT+CGG 0.430430 5_2:+13928375 Msa0758590:CDS
TTAGATTCTTTAAGTTGAGT+TGG 0.431314 5_2:-13924403 None:intergenic
AGCCAAGAATATTCAGGCCC+TGG 0.431422 5_2:+13928569 Msa0758590:three_prime_UTR
TACCGTGAAGCGAAGGTTGA+TGG 0.431767 5_2:+13922990 Msa0758590:CDS
TTCTTATCTTTCAGGTGCAT+TGG 0.437517 5_2:+13925126 Msa0758590:intron
TATCTTTCAGGTGCATTGGA+AGG 0.438453 5_2:+13925130 Msa0758590:intron
ATGTTAGCGAAAGTTAAATA+TGG 0.438654 5_2:-13924180 None:intergenic
TAATCCCGTTGAAGAAGAAC+TGG 0.438728 5_2:+13922704 Msa0758590:CDS
GCTGAACACAACAGGCCATT+TGG 0.441659 5_2:+13927353 Msa0758590:intron
ATGAAAATGAAATCAAGATA+AGG 0.448948 5_2:-13928541 None:intergenic
TATCCAAGGGCAAGGGCCAC+AGG 0.450914 5_2:-13928366 None:intergenic
AAAGAATGGGCTAGACAACT+TGG 0.454064 5_2:-13928456 None:intergenic
ATCAACTACATCTAAAGAAT+GGG 0.455075 5_2:-13928469 None:intergenic
TGAAAATGAAATCAAGATAA+GGG 0.455636 5_2:-13928540 None:intergenic
TTTCTGGGGCGTTATGCTGT+GGG 0.456388 5_2:+13925783 Msa0758590:CDS
GAAACCAGTTCTTCTTCAAC+GGG 0.456654 5_2:-13922708 None:intergenic
CTGGATTTGTATTCTGGGTG+TGG 0.458568 5_2:+13924445 Msa0758590:CDS
GAGAAGAGGAAAAGCGAAGC+GGG 0.458702 5_2:-13922484 None:intergenic
TAAAGAAAACAAGGTGGAAT+GGG 0.464628 5_2:+13927086 Msa0758590:CDS
ACAGATTCTGATTTGAATGC+TGG 0.467576 5_2:+13924897 Msa0758590:CDS
CCGATGAAGCTCAAAAGAAA+TGG 0.467775 5_2:+13922814 Msa0758590:CDS
ACAGGCCATTTGGTCGACTT+TGG 0.470283 5_2:+13927363 Msa0758590:intron
AATGTGTGTGCAGGTGATTA+AGG 0.470442 5_2:+13923891 Msa0758590:intron
CGAATGGGAATGATGGCTGC+AGG 0.476134 5_2:+13925834 Msa0758590:CDS
TTCGGCTCTGTAAAACCATT+GGG 0.476357 5_2:-13923787 None:intergenic
CCGCAAAGCTTATAGCAGTC+TGG 0.477033 5_2:-13927759 None:intergenic
CAAACAATAACCTGATTATG+AGG 0.477324 5_2:-13927425 None:intergenic
CAAAACATACGTGTGTTTCT+GGG 0.479283 5_2:-13924681 None:intergenic
ACGATTCCAGTTATGATACA+TGG 0.482110 5_2:+13925156 Msa0758590:CDS
CGAGAGAATGCAAGGCTACA+AGG 0.483765 5_2:+13927732 Msa0758590:CDS
CTTATCAGTTGCACGGACAT+TGG 0.484986 5_2:-13924362 None:intergenic
GTTTCTGGGGCGTTATGCTG+TGG 0.485630 5_2:+13925782 Msa0758590:CDS
CTCACTCGTTCTTGGTGTAT+CGG 0.487063 5_2:-13922842 None:intergenic
AGCGATGATGAAAGGAGCTA+TGG 0.490074 5_2:+13926407 Msa0758590:CDS
TCCGTGCAACTGATAAGAAA+GGG 0.491671 5_2:+13924368 Msa0758590:CDS
GTCTCGCTTTCTATTATGGC+AGG 0.492921 5_2:-13924313 None:intergenic
TTGCCACATTCCAAAGAAGA+AGG 0.494632 5_2:+13926942 Msa0758590:CDS
TCCGACGATGCATTCTTCGT+TGG 0.497844 5_2:+13922777 Msa0758590:CDS
TTAGATGTAGTTGATGATGA+TGG 0.499460 5_2:+13928477 Msa0758590:CDS
CTTCGGCTCTGTAAAACCAT+TGG 0.499873 5_2:-13923788 None:intergenic
CTTTCTTTCTTCTAGAAGGA+AGG 0.500737 5_2:-13922734 None:intergenic
GCCATTTGGTCGACTTTGGT+GGG 0.501789 5_2:+13927367 Msa0758590:CDS
ATGAATTATCAAGCTCGAAT+GGG 0.503860 5_2:+13925819 Msa0758590:CDS
CTTACTTTAAAATAAAGTCC+TGG 0.505726 5_2:-13925038 None:intergenic
GGGTGTGGAGCTATGTCCAC+TGG 0.507514 5_2:+13924460 Msa0758590:CDS
AAAGAAAGCGAAGCAATCTT+CGG 0.511714 5_2:+13922749 Msa0758590:CDS
TTATGCTGTGGGCCGTCTAG+TGG 0.511914 5_2:+13925794 Msa0758590:CDS
CATGAATTATCAAGCTCGAA+TGG 0.511989 5_2:+13925818 Msa0758590:CDS
GTCCGTGCAACTGATAAGAA+AGG 0.513074 5_2:+13924367 Msa0758590:CDS
CCCCTTTCTTATCAGTTGCA+CGG 0.513311 5_2:-13924369 None:intergenic
CACTAATGAAAATTGTCAGC+TGG 0.514015 5_2:+13926225 Msa0758590:CDS
TTAAAGAAAACAAGGTGGAA+TGG 0.514535 5_2:+13927085 Msa0758590:CDS
CACCACAAATAAAATCAGCT+TGG 0.514779 5_2:-13925590 None:intergenic
ACATTCGGTTTAGCAATTCA+AGG 0.515197 5_2:+13928390 Msa0758590:CDS
GTTCTTACTTCAAACTCAGT+GGG 0.517126 5_2:-13926082 None:intergenic
GGCCATTTGGTCGACTTTGG+TGG 0.517220 5_2:+13927366 Msa0758590:intron
ATCTTTCAGGTGCATTGGAA+GGG 0.520919 5_2:+13925131 Msa0758590:intron
AAAACACGCATCCGAAATTG+AGG 0.524141 5_2:-13925870 None:intergenic
TCATCGGTATTTAATTTCAA+AGG 0.524186 5_2:-13926907 None:intergenic
TTCTCCATCAGAACATACTT+AGG 0.525692 5_2:-13925729 None:intergenic
TGTGACGAGTTTGTACTGAA+TGG 0.527233 5_2:+13924864 Msa0758590:CDS
TCCCACCAAAGTCGACCAAA+TGG 0.528934 5_2:-13927368 None:intergenic
TAATGCAGGTACATGCAAGT+TGG 0.531949 5_2:+13928327 Msa0758590:intron
GATCATTAATTGCATCCTCA+AGG 0.533889 5_2:-13926261 None:intergenic
GAACTCTGTCTTGTTCTGGA+TGG 0.534548 5_2:-13927701 None:intergenic
TTCTGGCATTAAGCTTGTGA+CGG 0.535368 5_2:+13924504 Msa0758590:CDS
TGAAAATTGTCAGCTGGCCA+AGG 0.535950 5_2:+13926231 Msa0758590:CDS
ATACCTTCTTCTTTGGAATG+TGG 0.536325 5_2:-13926945 None:intergenic
GAGTGAGGATGAAAGTTTGA+AGG 0.536508 5_2:+13922956 Msa0758590:CDS
TTTAAGTCTCCTAAAAGAGT+GGG 0.536611 5_2:+13924833 Msa0758590:CDS
AATTTCCATTTACACTGAGC+GGG 0.537479 5_2:+13922402 None:intergenic
GAAGCCTAAGTATGTTCTGA+TGG 0.538220 5_2:+13925725 Msa0758590:CDS
GGCAAACTTCAGGGACCTCA+AGG 0.539453 5_2:+13927053 Msa0758590:CDS
CTCGATACAACCTCATGAGT+TGG 0.540046 5_2:-13926049 None:intergenic
ACCGTGAAGCGAAGGTTGAT+GGG 0.541235 5_2:+13922991 Msa0758590:CDS
AGAAACCAGTTCTTCTTCAA+CGG 0.541839 5_2:-13922709 None:intergenic
GGATTACATCGCTACGATTG+TGG 0.542274 5_2:+13923725 Msa0758590:CDS
TATATCAGATTAAAGAGAAG+TGG 0.544554 5_2:+13926458 Msa0758590:CDS
TGACTTGAAGAAATGGGCTG+TGG 0.544856 5_2:+13924618 Msa0758590:intron
ATGCAATGACATTTGTTCGT+GGG 0.548444 5_2:+13927242 Msa0758590:CDS
AGTTGCACGGACATTGGACC+CGG 0.551087 5_2:-13924356 None:intergenic
AACATACCTCAAGCCCTCGA+TGG 0.552579 5_2:-13925183 None:intergenic
TCAAGCTCGAATGGGAATGA+TGG 0.553083 5_2:+13925827 Msa0758590:CDS
AGATGCACTCTTTCAACAGA+GGG 0.553687 5_2:-13927111 None:intergenic
CTAAACCGAATGTGTATCCA+AGG 0.555284 5_2:-13928380 None:intergenic
AGACTACTCTCCATCTGCTA+TGG 0.555425 5_2:+13924993 Msa0758590:CDS
TTGTGTCTACTGTTGTAACA+AGG 0.557248 5_2:+13927396 Msa0758590:CDS
GCAATTCAAGGACTCTCTGA+TGG 0.560406 5_2:+13928402 Msa0758590:CDS
GGGAGCCCATCGAGGGCTTG+AGG 0.565566 5_2:+13925177 Msa0758590:CDS
GTTTCACTACCGTGAAGCGA+AGG 0.565732 5_2:+13922983 Msa0758590:CDS
CGAATGTGTATCCAAGGGCA+AGG 0.566219 5_2:-13928374 None:intergenic
ACATACCTCAAGCCCTCGAT+GGG 0.566713 5_2:-13925182 None:intergenic
TCGTTCCTCGTTCTTCTCAA+CGG 0.569879 5_2:+13922658 Msa0758590:CDS
ACTGAGCGGGTTGAAGTGCC+GGG 0.573761 5_2:+13922415 Msa0758590:five_prime_UTR
TGTGGTGGGCCACCTTGTCA+AGG 0.574035 5_2:+13925606 Msa0758590:CDS
AAGAATCTAAGAAGCTTGAG+TGG 0.574067 5_2:+13924416 Msa0758590:CDS
GTGGTGAGACTTACAGGAAG+AGG 0.574419 5_2:-13925389 None:intergenic
ATGATGATAGCGATGATGAA+AGG 0.575051 5_2:+13926399 Msa0758590:CDS
AATTTGCTGGTGGGTTTCTG+GGG 0.576721 5_2:+13925769 Msa0758590:CDS
GTGGTATGCTGTATGATCAC+AGG 0.577358 5_2:+13926884 Msa0758590:CDS
CATAAATACATACTTAGAAG+AGG 0.580332 5_2:-13927266 None:intergenic
CAACACTTTCAAGTGAATCC+GGG 0.580699 5_2:+13924338 Msa0758590:CDS
TATTAAATCATACAATTCCA+GGG 0.581570 5_2:-13928586 None:intergenic
ATTGGGATCACCATAGCAGA+TGG 0.582193 5_2:-13925003 None:intergenic
GGAAAAGACATGGATTAATG+AGG 0.584597 5_2:-13928516 None:intergenic
TTAGTATTCGAGAGAATGCA+AGG 0.585626 5_2:+13927724 Msa0758590:CDS
CGCTCCAAAGCAAAGGCCAG+TGG 0.588179 5_2:-13924476 None:intergenic
GACAACTTGGGTACTTAAAG+GGG 0.589664 5_2:-13928443 None:intergenic
CTTTAACAAGCACTCCCTTG+AGG 0.595401 5_2:-13927068 None:intergenic
ATATATAAATGAAAGAGAAG+AGG 0.596509 5_2:-13922498 None:intergenic
GCAAACTCTCTCATAGTCAT+CGG 0.597622 5_2:-13926923 None:intergenic
CGATTCCAGTTATGATACAT+GGG 0.597731 5_2:+13925157 Msa0758590:CDS
AAATAGACGCTCCAAAGCAA+AGG 0.600764 5_2:-13924483 None:intergenic
GCGATGATGAAAGGAGCTAT+GGG 0.602155 5_2:+13926408 Msa0758590:CDS
AAGCAATGGCCTTACTTCAG+TGG 0.602447 5_2:-13925910 None:intergenic
ACTTTCGCTAACATTGACAA+TGG 0.603027 5_2:+13924189 Msa0758590:CDS
AAATGCAGTTGCTGTTCCTG+TGG 0.603453 5_2:+13928350 Msa0758590:CDS
AACCTCAAATACCTCAGAGT+CGG 0.604058 5_2:-13924967 None:intergenic
GGAGGATAATGCTTATGTCA+AGG 0.604274 5_2:+13923028 Msa0758590:CDS
AGAAGCTGATGATGAAGCGA+TGG 0.605443 5_2:+13924935 Msa0758590:CDS
CAATTTCCATTTACACTGAG+CGG 0.606867 5_2:+13922401 None:intergenic
AGATAAGGGTGGAAAAGACA+TGG 0.607414 5_2:-13928526 None:intergenic
TGCAGGTGATTAAGGACCAT+GGG 0.609611 5_2:+13923899 Msa0758590:intron
GATAATTCATGGCCACTAGA+CGG 0.613254 5_2:-13925806 None:intergenic
GATACATGGGAGCCCATCGA+GGG 0.613692 5_2:+13925170 Msa0758590:CDS
AATAACCTGATTATGAGGCT+CGG 0.618623 5_2:-13927420 None:intergenic
TATGCAATGACATTTGTTCG+TGG 0.619188 5_2:+13927241 Msa0758590:CDS
TCCAACGAAGAATGCATCGT+CGG 0.619858 5_2:-13922778 None:intergenic
TGATCATACAGCATACCACT+TGG 0.622966 5_2:-13926880 None:intergenic
AAATGAAATCAAGATAAGGG+TGG 0.624158 5_2:-13928537 None:intergenic
GAATGCTGGCAAAGAAGCTG+AGG 0.624902 5_2:+13924911 Msa0758590:CDS
TGAGTTGGTAACAGATATGA+CGG 0.627481 5_2:-13926034 None:intergenic
AAGAATGGGCTAGACAACTT+GGG 0.629534 5_2:-13928455 None:intergenic
CACGCATCCGAAATTGAGGA+AGG 0.629581 5_2:-13925866 None:intergenic
AGTTCTTACTTCAAACTCAG+TGG 0.631096 5_2:-13926083 None:intergenic
TAGATGCACTCTTTCAACAG+AGG 0.633772 5_2:-13927112 None:intergenic
GAATGGGAATGATGGCTGCA+GGG 0.641368 5_2:+13925835 Msa0758590:CDS
GGATAATTCATCCGACTCTG+AGG 0.644647 5_2:+13924956 Msa0758590:CDS
ATATCTGTTACCAACTCATG+AGG 0.646482 5_2:+13926039 Msa0758590:CDS
GCAAACTTCAGGGACCTCAA+GGG 0.650920 5_2:+13927054 Msa0758590:CDS
GAATGTGTATCCAAGGGCAA+GGG 0.651696 5_2:-13928373 None:intergenic
GGCCAAGGCATTAAACCTTG+AGG 0.652857 5_2:+13926246 Msa0758590:CDS
TGTGTCTACTGTTGTAACAA+GGG 0.655093 5_2:+13927397 Msa0758590:CDS
TTAAAGGGGAGAGTTGTCAA+AGG 0.658649 5_2:-13928429 None:intergenic
GACTCTCAAAGTGCACCAAG+TGG 0.659799 5_2:+13926865 Msa0758590:CDS
TTCTTACTTCAAACTCAGTG+GGG 0.660921 5_2:-13926081 None:intergenic
CCGTGCAACTGATAAGAAAG+GGG 0.670667 5_2:+13924369 Msa0758590:CDS
TCGTTCTTGGTGTATCGGTG+AGG 0.672316 5_2:-13922837 None:intergenic
GTGCAGGTGATTAAGGACCA+TGG 0.674534 5_2:+13923898 Msa0758590:intron
ATATCAAAATAGAAGTCACA+AGG 0.681018 5_2:-13924144 None:intergenic
AGAGAAGAGGAAAAGCGAAG+CGG 0.681303 5_2:-13922485 None:intergenic
TTTGCGGCCCTGTCAAACAG+AGG 0.682060 5_2:+13927775 Msa0758590:CDS
GATGCACTCTTTCAACAGAG+GGG 0.682334 5_2:-13927110 None:intergenic
CCACTAACACCTTGACAAGG+TGG 0.683957 5_2:-13925615 None:intergenic
TAAACCGAATGTGTATCCAA+GGG 0.685117 5_2:-13928379 None:intergenic
TGATACATGGGAGCCCATCG+AGG 0.686118 5_2:+13925169 Msa0758590:CDS
ACACATACCTCTGTTTGACA+GGG 0.690367 5_2:-13927782 None:intergenic
AGTGCTTGTTAAAGAAAACA+AGG 0.696627 5_2:+13927077 Msa0758590:CDS
TTCTTCCGTTGAGAAGAACG+AGG 0.699637 5_2:-13922663 None:intergenic
TCAAAATAGAAGTCACAAGG+AGG 0.707483 5_2:-13924141 None:intergenic
GGAGATGTTTGAAACTCCTG+AGG 0.713389 5_2:+13923746 Msa0758590:CDS
GCTTGTTAAAGAAAACAAGG+TGG 0.727180 5_2:+13927080 Msa0758590:CDS
AAACCACTAACACCTTGACA+AGG 0.729461 5_2:-13925618 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TATTTTTTTTTTATTTTTTA+TGG + chr5_2:13923306-13923325 Msa0758590:intron 0.0%
!!! ACTATCTAAATATTTTTAAA+TGG + chr5_2:13925971-13925990 Msa0758590:intron 10.0%
!! TTTATTTGAACAAAAAAATA+TGG + chr5_2:13928642-13928661 Msa0758590:three_prime_UTR 10.0%
!!! TTTTATTTTTTATGGTTCAT+TGG + chr5_2:13923314-13923333 Msa0758590:intron 15.0%
!! TTTATTTCATGTTGAAAATT+TGG + chr5_2:13923526-13923545 Msa0758590:intron 15.0%
!! TCAACATTAAATCAAATAAA+AGG - chr5_2:13923561-13923580 None:intergenic 15.0%
!!! TTTTACTGATTTTATAATCT+TGG + chr5_2:13924588-13924607 Msa0758590:intron 15.0%
!! TAATAATTAACTACACAATA+AGG - chr5_2:13925072-13925091 None:intergenic 15.0%
!!! ATGAAAGATTTTGTTATAAA+TGG + chr5_2:13925347-13925366 Msa0758590:CDS 15.0%
!!! TTTTGTTATAAATGGATATA+AGG + chr5_2:13925355-13925374 Msa0758590:CDS 15.0%
!!! TCTAAATATTTTTAAATGGA+AGG + chr5_2:13925975-13925994 Msa0758590:intron 15.0%
!!! TATTTATGTACATCTATTTT+AGG + chr5_2:13927281-13927300 Msa0758590:intron 15.0%
!!! ATTTTATCATATGAAGTATT+TGG + chr5_2:13927970-13927989 Msa0758590:intron 15.0%
!! ATGATTTAATATTCACATTT+CGG + chr5_2:13928598-13928617 Msa0758590:three_prime_UTR 15.0%
!! ATATATAAATGAAAGAGAAG+AGG - chr5_2:13922501-13922520 None:intergenic 20.0%
!!! TGTTGAAAATTTGATGTTTT+AGG + chr5_2:13923100-13923119 Msa0758590:intron 20.0%
!!! GTTGAAAATTTGATGTTTTA+GGG + chr5_2:13923101-13923120 Msa0758590:intron 20.0%
!!! TTTGATTCATGTTGAAATTT+TGG + chr5_2:13923412-13923431 Msa0758590:intron 20.0%
!!! AATGTTGAAAATTGTGTTTT+TGG + chr5_2:13923459-13923478 Msa0758590:intron 20.0%
!!! AATGTTGAAAATTGTGTTTT+AGG + chr5_2:13923459-13923478 Msa0758590:intron 20.0%
!!! AATTTTAACTCTTGTGTTTT+GGG + chr5_2:13923826-13923845 Msa0758590:intron 20.0%
!! TCAACATAAAAAATTTGGTA+AGG - chr5_2:13924266-13924285 None:intergenic 20.0%
!! CACAATCAACATAAAAAATT+TGG - chr5_2:13924271-13924290 None:intergenic 20.0%
!!! CAAATTTTTTATGTTGATTG+TGG + chr5_2:13924269-13924288 Msa0758590:intron 20.0%
!! CTATAAATTTCTTATCTTTC+AGG + chr5_2:13925118-13925137 Msa0758590:intron 20.0%
!!! ATAGTCAATATCTTGATAAT+TGG - chr5_2:13925209-13925228 None:intergenic 20.0%
!! AAACTATATTCACAATGTAT+TGG - chr5_2:13926313-13926332 None:intergenic 20.0%
!!! TATACAACATTGTTTTAAAG+AGG - chr5_2:13927503-13927522 None:intergenic 20.0%
!!! TCTTATCTTTTTGTTGAAAT+TGG + chr5_2:13927816-13927835 Msa0758590:intron 20.0%
!!! TTTTTGTTGAAATTGGTAAA+TGG + chr5_2:13927823-13927842 Msa0758590:intron 20.0%
!! ATATGGAAGTTAGTTATAAT+AGG - chr5_2:13928083-13928102 None:intergenic 20.0%
!! GTGCAATTTAGTAATAAATA+TGG - chr5_2:13928100-13928119 None:intergenic 20.0%
!! TTAGGTGTAATATTTCTTAT+TGG + chr5_2:13928160-13928179 Msa0758590:intron 20.0%
!! TGAAAATGAAATCAAGATAA+GGG - chr5_2:13928543-13928562 None:intergenic 20.0%
!! ATGAAAATGAAATCAAGATA+AGG - chr5_2:13928544-13928563 None:intergenic 20.0%
!! TATTAAATCATACAATTCCA+GGG - chr5_2:13928589-13928608 None:intergenic 20.0%
!! ATATTAAATCATACAATTCC+AGG - chr5_2:13928590-13928609 None:intergenic 20.0%
!! AACAAAAAAATATGGCAAAT+GGG + chr5_2:13928650-13928669 Msa0758590:three_prime_UTR 20.0%
!!! ATAAGCGCTTATTTTTTGTT+AGG - chr5_2:13922576-13922595 None:intergenic 25.0%
!! TTATTTCTTTGATTGCATGT+TGG + chr5_2:13923125-13923144 Msa0758590:intron 25.0%
!! TGTTGAGATTTTTCTACTTT+AGG + chr5_2:13923182-13923201 Msa0758590:intron 25.0%
!! GTTGAGATTTTTCTACTTTA+GGG + chr5_2:13923183-13923202 Msa0758590:intron 25.0%
! TATGATTTCGTGTTGAAAAT+TGG + chr5_2:13923214-13923233 Msa0758590:intron 25.0%
! ATGATTTCGTGTTGAAAATT+GGG + chr5_2:13923215-13923234 Msa0758590:intron 25.0%
!! ATGTTGAAAACTGTGTTTTA+TGG + chr5_2:13923347-13923366 Msa0758590:intron 25.0%
! TATGGTTCATTTCTTTGATT+TGG + chr5_2:13923365-13923384 Msa0758590:intron 25.0%
!!! CATGTTGAAATTTTGGTTTT+AGG + chr5_2:13923419-13923438 Msa0758590:intron 25.0%
! TCAACATTAACTCAAAAGAA+AGG - chr5_2:13923447-13923466 None:intergenic 25.0%
! TTGGATTCATTTCTTTGATT+TGG + chr5_2:13923478-13923497 Msa0758590:intron 25.0%
!!! CATGTTGAAAATTTGGTTTT+AGG + chr5_2:13923533-13923552 Msa0758590:intron 25.0%
! TTCAATATTTACAGTGTCTT+CGG - chr5_2:13923808-13923827 None:intergenic 25.0%
!!! GAATTTTAACTCTTGTGTTT+TGG + chr5_2:13923825-13923844 Msa0758590:intron 25.0%
!!! TTTAGGGTTATTGTTGATTT+TGG + chr5_2:13923861-13923880 Msa0758590:intron 25.0%
! ATCCTTTAGATTGTTTAGTT+AGG + chr5_2:13923971-13923990 Msa0758590:CDS 25.0%
! TTCCTAACTAAACAATCTAA+AGG - chr5_2:13923976-13923995 None:intergenic 25.0%
!!! ATGTTGATTTTGTTTACTAC+AGG + chr5_2:13924098-13924117 Msa0758590:intron 25.0%
! ATATCAAAATAGAAGTCACA+AGG - chr5_2:13924147-13924166 None:intergenic 25.0%
! ATGTTAGCGAAAGTTAAATA+TGG - chr5_2:13924183-13924202 None:intergenic 25.0%
!!! TTAGATTCTTTAAGTTGAGT+TGG - chr5_2:13924406-13924425 None:intergenic 25.0%
!! TAATTTGCATGATGTTTCTT+TGG + chr5_2:13924536-13924555 Msa0758590:intron 25.0%
!!! TTGTTTTTGACTTGAAGAAA+TGG + chr5_2:13924611-13924630 Msa0758590:intron 25.0%
!!! TGTTTTTGACTTGAAGAAAT+GGG + chr5_2:13924612-13924631 Msa0758590:intron 25.0%
!!! CTTACTTTAAAATAAAGTCC+TGG - chr5_2:13925041-13925060 None:intergenic 25.0%
! AGTTAATTATTATCAGCTAG+TGG + chr5_2:13925080-13925099 Msa0758590:intron 25.0%
! TCTTAAGTAAAGCAAAGTTA+GGG - chr5_2:13925237-13925256 None:intergenic 25.0%
! ATCTTAAGTAAAGCAAAGTT+AGG - chr5_2:13925238-13925257 None:intergenic 25.0%
!!! TTATTTTTTTCATCCTCCAA+CGG - chr5_2:13925669-13925688 None:intergenic 25.0%
! AAAACTAGTACTATAAGCAA+TGG - chr5_2:13925927-13925946 None:intergenic 25.0%
!!! TATTTTTGAAAATCAGTACG+AGG - chr5_2:13926440-13926459 None:intergenic 25.0%
! TATATCAGATTAAAGAGAAG+TGG + chr5_2:13926458-13926477 Msa0758590:CDS 25.0%
! ATTTATCAGCTAAAATGTAC+TGG + chr5_2:13926652-13926671 Msa0758590:intron 25.0%
!! TCATCGGTATTTAATTTCAA+AGG - chr5_2:13926910-13926929 None:intergenic 25.0%
! CATAAATACATACTTAGAAG+AGG - chr5_2:13927269-13927288 None:intergenic 25.0%
!!! TTTTAAAGAGGTTTTGCAAT+GGG - chr5_2:13927491-13927510 None:intergenic 25.0%
! CATAGATATGTGAAAATTTG+TGG - chr5_2:13927931-13927950 None:intergenic 25.0%
! ATAATAGGTTAATCAGTTGT+TGG - chr5_2:13928068-13928087 None:intergenic 25.0%
!! TTCTTATTGGTCTAACAATA+TGG + chr5_2:13928173-13928192 Msa0758590:intron 25.0%
! AATAGTTACATCTTTAATGC+AGG + chr5_2:13928313-13928332 Msa0758590:intron 25.0%
! ATCAACTACATCTAAAGAAT+GGG - chr5_2:13928472-13928491 None:intergenic 25.0%
!!! TTTTTAAGCCAAGAATATTC+AGG + chr5_2:13928563-13928582 Msa0758590:three_prime_UTR 25.0%
! GAACAAAAAAATATGGCAAA+TGG + chr5_2:13928649-13928668 Msa0758590:three_prime_UTR 25.0%
!! TTTCACTACTTTTCATTTCC+CGG - chr5_2:13922436-13922455 None:intergenic 30.0%
! TGATGGGATTTTATATAAGC+TGG + chr5_2:13923007-13923026 Msa0758590:CDS 30.0%
!! TCATTTCTTTGATTTGGTGA+TGG + chr5_2:13923371-13923390 Msa0758590:intron 30.0%
!! GATTCATTTCTTTGATTTGG+TGG + chr5_2:13923481-13923500 Msa0758590:intron 30.0%
! TTGTTTGCTGAATGTTGTTT+AGG + chr5_2:13923686-13923705 Msa0758590:intron 30.0%
! TGTTTGCTGAATGTTGTTTA+GGG + chr5_2:13923687-13923706 Msa0758590:intron 30.0%
GTAAAATATTGTTCTTCCTC+AGG - chr5_2:13923765-13923784 None:intergenic 30.0%
! AACAATATTTTACTGCCCAA+TGG + chr5_2:13923772-13923791 Msa0758590:CDS 30.0%
ACTTTACTGGATTTGTATTC+TGG + chr5_2:13924439-13924458 Msa0758590:CDS 30.0%
CTTTACTGGATTTGTATTCT+GGG + chr5_2:13924440-13924459 Msa0758590:CDS 30.0%
!!! TTGGTTCATTTTAACTTTGC+TGG + chr5_2:13924555-13924574 Msa0758590:intron 30.0%
TCACCTGAATTTAACATTTC+GGG - chr5_2:13924791-13924810 None:intergenic 30.0%
CTCACCTGAATTTAACATTT+CGG - chr5_2:13924792-13924811 None:intergenic 30.0%
AGACTTAAAAAGTCTTCTGT+GGG - chr5_2:13924822-13924841 None:intergenic 30.0%
!! TTTTAAGTCTCCTAAAAGAG+TGG + chr5_2:13924832-13924851 Msa0758590:CDS 30.0%
TTTAAGTCTCCTAAAAGAGT+GGG + chr5_2:13924833-13924852 Msa0758590:CDS 30.0%
CTTAAGTAAAGCAAAGTTAG+GGG - chr5_2:13925236-13925255 None:intergenic 30.0%
TAGCTATAAGCCTTAAGTAA+CGG - chr5_2:13925265-13925284 None:intergenic 30.0%
TTGAGTACAAGTCAATAATG+AGG - chr5_2:13925416-13925435 None:intergenic 30.0%
GAGAATTGATAAACCATTAG+AGG - chr5_2:13925451-13925470 None:intergenic 30.0%
AACCATTAGAGGTGAAAAAA+GGG - chr5_2:13925514-13925533 None:intergenic 30.0%
AAACCATTAGAGGTGAAAAA+AGG - chr5_2:13925515-13925534 None:intergenic 30.0%
GAGAATTGATAAACCATTAG+AGG - chr5_2:13925451-13925470 None:intergenic 30.0%
!! AAGCTGATTTTATTTGTGGT+GGG + chr5_2:13925592-13925611 Msa0758590:CDS 30.0%
!!! GTAGACATTTTGAAATTTGC+TGG + chr5_2:13925756-13925775 Msa0758590:CDS 30.0%
!!! ACATTTTGAAATTTGCTGGT+GGG + chr5_2:13925760-13925779 Msa0758590:CDS 30.0%
ATGAATTATCAAGCTCGAAT+GGG + chr5_2:13925819-13925838 Msa0758590:CDS 30.0%
GAACTTTACTATCACAACAT+GGG - chr5_2:13926151-13926170 None:intergenic 30.0%
AGAACTTTACTATCACAACA+TGG - chr5_2:13926152-13926171 None:intergenic 30.0%
! AAGTTCTAATCAATGTGATC+TGG + chr5_2:13926165-13926184 Msa0758590:intron 30.0%
! AGTTCTAATCAATGTGATCT+GGG + chr5_2:13926166-13926185 Msa0758590:intron 30.0%
AACAAAATCAACATACTGGT+GGG - chr5_2:13926288-13926307 None:intergenic 30.0%
TTTGATTCCACTTCTTTACT+CGG + chr5_2:13926351-13926370 Msa0758590:intron 30.0%
!!! TTTGAGTTTTGAAGTAGTCT+TGG + chr5_2:13926498-13926517 Msa0758590:intron 30.0%
GATTGTATGAATCTTACTCT+AGG - chr5_2:13926629-13926648 None:intergenic 30.0%
TAGAATTGTGTATGTGTATG+TGG + chr5_2:13926724-13926743 Msa0758590:intron 30.0%
AGATATGATACCTTCTTCTT+TGG - chr5_2:13926955-13926974 None:intergenic 30.0%
! AGTGCTTGTTAAAGAAAACA+AGG + chr5_2:13927077-13927096 Msa0758590:CDS 30.0%
TTAAAGAAAACAAGGTGGAA+TGG + chr5_2:13927085-13927104 Msa0758590:CDS 30.0%
TAAAGAAAACAAGGTGGAAT+GGG + chr5_2:13927086-13927105 Msa0758590:CDS 30.0%
TACTAATCTTGTCTTGTCTT+AGG + chr5_2:13927154-13927173 Msa0758590:intron 30.0%
ACTAATCTTGTCTTGTCTTA+GGG + chr5_2:13927155-13927174 Msa0758590:intron 30.0%
ACAAATGTCATTGCATAATC+TGG - chr5_2:13927238-13927257 None:intergenic 30.0%
CAAACAATAACCTGATTATG+AGG - chr5_2:13927428-13927447 None:intergenic 30.0%
!!! GTTTTAAAGAGGTTTTGCAA+TGG - chr5_2:13927492-13927511 None:intergenic 30.0%
TGTGAAAATTTGTGGATACA+AGG - chr5_2:13927923-13927942 None:intergenic 30.0%
! ATATGAAGTATTTGGAGACA+AGG + chr5_2:13927978-13927997 Msa0758590:intron 30.0%
ATTCCAATCTCAAAATGGAA+GGG - chr5_2:13928024-13928043 None:intergenic 30.0%
AACAGATTCCAATCTCAAAA+TGG - chr5_2:13928029-13928048 None:intergenic 30.0%
CATCAACTACATCTAAAGAA+TGG - chr5_2:13928473-13928492 None:intergenic 30.0%
!! TTAGATGTAGTTGATGATGA+TGG + chr5_2:13928477-13928496 Msa0758590:CDS 30.0%
AAATGAAATCAAGATAAGGG+TGG - chr5_2:13928540-13928559 None:intergenic 30.0%
!!! GATTTACGAACGCGTTTTTT+AGG - chr5_2:13922621-13922640 None:intergenic 35.0%
!!! GGGATTAACAGGAGATTTTT+TGG - chr5_2:13922691-13922710 None:intergenic 35.0%
AGAAACCAGTTCTTCTTCAA+CGG - chr5_2:13922712-13922731 None:intergenic 35.0%
! CTTTCTTTCTTCTAGAAGGA+AGG - chr5_2:13922737-13922756 None:intergenic 35.0%
TTCGCTTTCTTTCTTCTAGA+AGG - chr5_2:13922741-13922760 None:intergenic 35.0%
AAAGAAAGCGAAGCAATCTT+CGG + chr5_2:13922749-13922768 Msa0758590:CDS 35.0%
! CCATTTCTTTTGAGCTTCAT+CGG - chr5_2:13922817-13922836 None:intergenic 35.0%
ATAGAAAACTCACTCGTTCT+TGG - chr5_2:13922853-13922872 None:intergenic 35.0%
! TGGGATTTTATATAAGCTGG+AGG + chr5_2:13923010-13923029 Msa0758590:CDS 35.0%
!! TCATTTCTTTGATTTGGTGG+TGG + chr5_2:13923484-13923503 Msa0758590:intron 35.0%
! ATGCTGAATACTGTGTTGTT+TGG + chr5_2:13923614-13923633 Msa0758590:intron 35.0%
!! TGCTGAATACTGTGTTGTTT+GGG + chr5_2:13923615-13923634 Msa0758590:intron 35.0%
! GTTTGCTGAATGTTGTTTAG+GGG + chr5_2:13923688-13923707 Msa0758590:intron 35.0%
! TTTGCTGAATGTTGTTTAGG+GGG + chr5_2:13923689-13923708 Msa0758590:intron 35.0%
! TTGGGTTTGTTTAGCTGTTT+AGG + chr5_2:13923844-13923863 Msa0758590:intron 35.0%
! TGGGTTTGTTTAGCTGTTTA+GGG + chr5_2:13923845-13923864 Msa0758590:intron 35.0%
! TTTTGTCAACTAGATTCCCA+TGG - chr5_2:13923918-13923937 None:intergenic 35.0%
GGAATCTAGTTGACAAAAAG+AGG + chr5_2:13923920-13923939 Msa0758590:CDS 35.0%
TCAAAATAGAAGTCACAAGG+AGG - chr5_2:13924144-13924163 None:intergenic 35.0%
ACTTTCGCTAACATTGACAA+TGG + chr5_2:13924189-13924208 Msa0758590:CDS 35.0%
TGAAGTCTCGCTTTCTATTA+TGG - chr5_2:13924320-13924339 None:intergenic 35.0%
! TCAACACTTTCAAGTGAATC+CGG + chr5_2:13924337-13924356 Msa0758590:CDS 35.0%
AAGAATCTAAGAAGCTTGAG+TGG + chr5_2:13924416-13924435 Msa0758590:CDS 35.0%
CAAAACATACGTGTGTTTCT+GGG - chr5_2:13924684-13924703 None:intergenic 35.0%
CTTCCCGAAATGTTAAATTC+AGG + chr5_2:13924785-13924804 Msa0758590:intron 35.0%
CGAAATGTTAAATTCAGGTG+AGG + chr5_2:13924790-13924809 Msa0758590:intron 35.0%
GAGACTTAAAAAGTCTTCTG+TGG - chr5_2:13924823-13924842 None:intergenic 35.0%
! ACAGATTCTGATTTGAATGC+TGG + chr5_2:13924897-13924916 Msa0758590:CDS 35.0%
!! CCTGGTTTTTCATCTTCATT+GGG - chr5_2:13925023-13925042 None:intergenic 35.0%
!! TCCTGGTTTTTCATCTTCAT+TGG - chr5_2:13925024-13925043 None:intergenic 35.0%
! TTCTTATCTTTCAGGTGCAT+TGG + chr5_2:13925126-13925145 Msa0758590:intron 35.0%
ACGATTCCAGTTATGATACA+TGG + chr5_2:13925156-13925175 Msa0758590:CDS 35.0%
CGATTCCAGTTATGATACAT+GGG + chr5_2:13925157-13925176 Msa0758590:CDS 35.0%
TAAGATTTGCCCGTTACTTA+AGG + chr5_2:13925252-13925271 Msa0758590:intron 35.0%
AGCTATAAGCCTTAAGTAAC+GGG - chr5_2:13925264-13925283 None:intergenic 35.0%
TACAAGTCAATAATGAGGAG+TGG - chr5_2:13925411-13925430 None:intergenic 35.0%
AACCATTAGAGGTGAAAGAA+GGG - chr5_2:13925440-13925459 None:intergenic 35.0%
AAACCATTAGAGGTGAAAGA+AGG - chr5_2:13925441-13925460 None:intergenic 35.0%
ACCATTAGAGGTGAAAAAAG+GGG - chr5_2:13925513-13925532 None:intergenic 35.0%
TACTACTTTATGCTCGTACA+GGG + chr5_2:13925567-13925586 Msa0758590:intron 35.0%
CACCACAAATAAAATCAGCT+TGG - chr5_2:13925593-13925612 None:intergenic 35.0%
!! CAAGCTGATTTTATTTGTGG+TGG + chr5_2:13925591-13925610 Msa0758590:CDS 35.0%
TTCTCCATCAGAACATACTT+AGG - chr5_2:13925732-13925751 None:intergenic 35.0%
!!! GACATTTTGAAATTTGCTGG+TGG + chr5_2:13925759-13925778 Msa0758590:CDS 35.0%
! CATTCGAGCTTGATAATTCA+TGG - chr5_2:13925820-13925839 None:intergenic 35.0%
CATGAATTATCAAGCTCGAA+TGG + chr5_2:13925818-13925837 Msa0758590:CDS 35.0%
!! TGAGTTGGTAACAGATATGA+CGG - chr5_2:13926037-13926056 None:intergenic 35.0%
ATATCTGTTACCAACTCATG+AGG + chr5_2:13926039-13926058 Msa0758590:CDS 35.0%
TTCTTACTTCAAACTCAGTG+GGG - chr5_2:13926084-13926103 None:intergenic 35.0%
GTTCTTACTTCAAACTCAGT+GGG - chr5_2:13926085-13926104 None:intergenic 35.0%
AGTTCTTACTTCAAACTCAG+TGG - chr5_2:13926086-13926105 None:intergenic 35.0%
! TTGTGCCTTTTTCTTAGACA+AGG + chr5_2:13926123-13926142 Msa0758590:intron 35.0%
! TCTGGGTACTTTTATAATGC+AGG + chr5_2:13926183-13926202 Msa0758590:intron 35.0%
! CAGCTGACAATTTTCATTAG+TGG - chr5_2:13926227-13926246 None:intergenic 35.0%
CACTAATGAAAATTGTCAGC+TGG + chr5_2:13926225-13926244 Msa0758590:CDS 35.0%
GATCATTAATTGCATCCTCA+AGG - chr5_2:13926264-13926283 None:intergenic 35.0%
GAACAAAATCAACATACTGG+TGG - chr5_2:13926289-13926308 None:intergenic 35.0%
GGTGAACAAAATCAACATAC+TGG - chr5_2:13926292-13926311 None:intergenic 35.0%
TTGATTCCACTTCTTTACTC+GGG + chr5_2:13926352-13926371 Msa0758590:intron 35.0%
! TCGGGTTTCTTTTATCAAAC+AGG + chr5_2:13926370-13926389 Msa0758590:intron 35.0%
TCCTTCATCCTTAAACTGAA+CGG + chr5_2:13926794-13926813 Msa0758590:intron 35.0%
!! ATACCTTCTTCTTTGGAATG+TGG - chr5_2:13926948-13926967 None:intergenic 35.0%
! TTGTGCTTGCTTGTCTTTTT+AGG + chr5_2:13927029-13927048 Msa0758590:intron 35.0%
! TGTGCTTGCTTGTCTTTTTA+GGG + chr5_2:13927030-13927049 Msa0758590:intron 35.0%
! GCTTGTTAAAGAAAACAAGG+TGG + chr5_2:13927080-13927099 Msa0758590:CDS 35.0%
! GAAAGAGTGCATCTAAAATC+TGG + chr5_2:13927120-13927139 Msa0758590:CDS 35.0%
! TCTAAAATCTGGAAAGCCTT+TGG + chr5_2:13927131-13927150 Msa0758590:CDS 35.0%
CAAGACAAGATTAGTACCAA+AGG - chr5_2:13927150-13927169 None:intergenic 35.0%
TATGCAATGACATTTGTTCG+TGG + chr5_2:13927241-13927260 Msa0758590:CDS 35.0%
ATGCAATGACATTTGTTCGT+GGG + chr5_2:13927242-13927261 Msa0758590:CDS 35.0%
TTGTGTCTACTGTTGTAACA+AGG + chr5_2:13927396-13927415 Msa0758590:CDS 35.0%
TGTGTCTACTGTTGTAACAA+GGG + chr5_2:13927397-13927416 Msa0758590:CDS 35.0%
AATAACCTGATTATGAGGCT+CGG - chr5_2:13927423-13927442 None:intergenic 35.0%
TGAGAAATGTTATTGACCTC+AGG + chr5_2:13927523-13927542 Msa0758590:intron 35.0%
ATGCTAACATGATAATCCTG+AGG - chr5_2:13927542-13927561 None:intergenic 35.0%
ATCTGACCATGTTCTTTGTT+TGG + chr5_2:13927578-13927597 Msa0758590:intron 35.0%
TTAGTATTCGAGAGAATGCA+AGG + chr5_2:13927724-13927743 Msa0758590:CDS 35.0%
GAAATTGGTAAATGGAGAAC+TGG + chr5_2:13927831-13927850 Msa0758590:intron 35.0%
GATTCCAATCTCAAAATGGA+AGG - chr5_2:13928025-13928044 None:intergenic 35.0%
! TTGTTGGTTAAGGAATTGGA+AGG - chr5_2:13928052-13928071 None:intergenic 35.0%
! TCAGTTGTTGGTTAAGGAAT+TGG - chr5_2:13928056-13928075 None:intergenic 35.0%
! GGTTAATCAGTTGTTGGTTA+AGG - chr5_2:13928062-13928081 None:intergenic 35.0%
AAGTTCTTTACTGATCCCTT+AGG - chr5_2:13928140-13928159 None:intergenic 35.0%
! GGGATCAGTAAAGAACTTTT+AGG + chr5_2:13928142-13928161 Msa0758590:intron 35.0%
TGCCATGCTATACATAATGA+CGG - chr5_2:13928290-13928309 None:intergenic 35.0%
TAAACCGAATGTGTATCCAA+GGG - chr5_2:13928382-13928401 None:intergenic 35.0%
ACATTCGGTTTAGCAATTCA+AGG + chr5_2:13928390-13928409 Msa0758590:CDS 35.0%
AGACAACTTGGGTACTTAAA+GGG - chr5_2:13928447-13928466 None:intergenic 35.0%
TAGACAACTTGGGTACTTAA+AGG - chr5_2:13928448-13928467 None:intergenic 35.0%
! GGAAAAGACATGGATTAATG+AGG - chr5_2:13928519-13928538 None:intergenic 35.0%
TGTTAGGAGAAGAGAGAAGA+AGG - chr5_2:13922560-13922579 None:intergenic 40.0%
!!! GCGTTTTTTAGGCATTGTTG+AGG - chr5_2:13922610-13922629 None:intergenic 40.0%
TCTTCTTCAACGGGATTAAC+AGG - chr5_2:13922702-13922721 None:intergenic 40.0%
TAATCCCGTTGAAGAAGAAC+TGG + chr5_2:13922704-13922723 Msa0758590:CDS 40.0%
GAAACCAGTTCTTCTTCAAC+GGG - chr5_2:13922711-13922730 None:intergenic 40.0%
CCGATGAAGCTCAAAAGAAA+TGG + chr5_2:13922814-13922833 Msa0758590:CDS 40.0%
! GTTTTGTAGTGAATCGAGTG+AGG + chr5_2:13922941-13922960 Msa0758590:intron 40.0%
GAGTGAGGATGAAAGTTTGA+AGG + chr5_2:13922956-13922975 Msa0758590:CDS 40.0%
GGAGGATAATGCTTATGTCA+AGG + chr5_2:13923028-13923047 Msa0758590:CDS 40.0%
TTCGGCTCTGTAAAACCATT+GGG - chr5_2:13923790-13923809 None:intergenic 40.0%
GGTAATTTGAATGTGTGTGC+AGG + chr5_2:13923882-13923901 Msa0758590:intron 40.0%
AATGTGTGTGCAGGTGATTA+AGG + chr5_2:13923891-13923910 Msa0758590:intron 40.0%
! CTACACAAAGCACTTACATC+AGG - chr5_2:13924021-13924040 None:intergenic 40.0%
! CAACACTTTCAAGTGAATCC+GGG + chr5_2:13924338-13924357 Msa0758590:CDS 40.0%
TCCGTGCAACTGATAAGAAA+GGG + chr5_2:13924368-13924387 Msa0758590:CDS 40.0%
AAATAGACGCTCCAAAGCAA+AGG - chr5_2:13924486-13924505 None:intergenic 40.0%
TTCTGGCATTAAGCTTGTGA+CGG + chr5_2:13924504-13924523 Msa0758590:CDS 40.0%
CCAAAACATACGTGTGTTTC+TGG - chr5_2:13924685-13924704 None:intergenic 40.0%
! CCAGAAACACACGTATGTTT+TGG + chr5_2:13924682-13924701 Msa0758590:intron 40.0%
! AAAGCTTAGCCCACTCTTTT+AGG - chr5_2:13924845-13924864 None:intergenic 40.0%
TGTGACGAGTTTGTACTGAA+TGG + chr5_2:13924864-13924883 Msa0758590:CDS 40.0%
AACCTCAAATACCTCAGAGT+CGG - chr5_2:13924970-13924989 None:intergenic 40.0%
CCCAATGAAGATGAAAAACC+AGG + chr5_2:13925020-13925039 Msa0758590:CDS 40.0%
! TATCTTTCAGGTGCATTGGA+AGG + chr5_2:13925130-13925149 Msa0758590:intron 40.0%
! ATCTTTCAGGTGCATTGGAA+GGG + chr5_2:13925131-13925150 Msa0758590:intron 40.0%
ACCATTAGAGGTGAAAGAAG+GGG - chr5_2:13925439-13925458 None:intergenic 40.0%
!!! ACCCCTTTTTTCACCTCTAA+TGG + chr5_2:13925509-13925528 Msa0758590:intron 40.0%
GTACTACTTTATGCTCGTAC+AGG + chr5_2:13925566-13925585 Msa0758590:intron 40.0%
!! GGCCAAGCTGATTTTATTTG+TGG + chr5_2:13925588-13925607 Msa0758590:CDS 40.0%
AAACCACTAACACCTTGACA+AGG - chr5_2:13925621-13925640 None:intergenic 40.0%
TTAGTGGTTTCAATCGCTTC+AGG + chr5_2:13925631-13925650 Msa0758590:CDS 40.0%
GAAGCCTAAGTATGTTCTGA+TGG + chr5_2:13925725-13925744 Msa0758590:CDS 40.0%
!! AAATTTGCTGGTGGGTTTCT+GGG + chr5_2:13925768-13925787 Msa0758590:CDS 40.0%
GATAATTCATGGCCACTAGA+CGG - chr5_2:13925809-13925828 None:intergenic 40.0%
CATATGGCCTTCCTCAATTT+CGG + chr5_2:13925859-13925878 Msa0758590:CDS 40.0%
AAAACACGCATCCGAAATTG+AGG - chr5_2:13925873-13925892 None:intergenic 40.0%
! TTCGGATGCGTGTTTTTCTT+TGG + chr5_2:13925877-13925896 Msa0758590:CDS 40.0%
! TCGGATGCGTGTTTTTCTTT+GGG + chr5_2:13925878-13925897 Msa0758590:CDS 40.0%
GGGTTCCTTGTCTAAGAAAA+AGG - chr5_2:13926131-13926150 None:intergenic 40.0%
ATCCTCAAGGTTTAATGCCT+TGG - chr5_2:13926251-13926270 None:intergenic 40.0%
AAGAAACCCGAGTAAAGAAG+TGG - chr5_2:13926361-13926380 None:intergenic 40.0%
! AACTGCATTTTCTCTCACTC+TGG + chr5_2:13926688-13926707 Msa0758590:intron 40.0%
GCATGTTGTTACATGTCACA+TGG + chr5_2:13926752-13926771 Msa0758590:intron 40.0%
CCTTCATCCTTAAACTGAAC+GGG + chr5_2:13926795-13926814 Msa0758590:intron 40.0%
TTCAACACCCGTTCAGTTTA+AGG - chr5_2:13926805-13926824 None:intergenic 40.0%
! TGTGTTTTCTACTCCAGAGA+TGG + chr5_2:13926828-13926847 Msa0758590:intron 40.0%
GCAGAATAATTCACCATCTC+TGG - chr5_2:13926844-13926863 None:intergenic 40.0%
TGATCATACAGCATACCACT+TGG - chr5_2:13926883-13926902 None:intergenic 40.0%
GCAAACTCTCTCATAGTCAT+CGG - chr5_2:13926926-13926945 None:intergenic 40.0%
TTGCCACATTCCAAAGAAGA+AGG + chr5_2:13926942-13926961 Msa0758590:CDS 40.0%
! GTGCTTGCTTGTCTTTTTAG+GGG + chr5_2:13927031-13927050 Msa0758590:intron 40.0%
!! TGCTTGCTTGTCTTTTTAGG+GGG + chr5_2:13927032-13927051 Msa0758590:intron 40.0%
!! TTTTTAGGGGGCAAACTTCA+GGG + chr5_2:13927044-13927063 Msa0758590:intron 40.0%
AGATGCACTCTTTCAACAGA+GGG - chr5_2:13927114-13927133 None:intergenic 40.0%
TAGATGCACTCTTTCAACAG+AGG - chr5_2:13927115-13927134 None:intergenic 40.0%
CCTGTGGAAAAAAAAGGTAG+TGG - chr5_2:13927213-13927232 None:intergenic 40.0%
!!! CCACTACCTTTTTTTTCCAC+AGG + chr5_2:13927210-13927229 Msa0758590:intron 40.0%
CTGGAACCTGTGGAAAAAAA+AGG - chr5_2:13927219-13927238 None:intergenic 40.0%
! ATTGCATAATCTGGAACCTG+TGG - chr5_2:13927229-13927248 None:intergenic 40.0%
ATGTATCTGCTGAACACAAC+AGG + chr5_2:13927345-13927364 Msa0758590:intron 40.0%
! TAAAGAGGTTTTGCAATGGG+AGG - chr5_2:13927488-13927507 None:intergenic 40.0%
ACGAGTCCAAACAAAGAACA+TGG - chr5_2:13927587-13927606 None:intergenic 40.0%
ACCTGGAAATGGAATGACAT+GGG - chr5_2:13927675-13927694 None:intergenic 40.0%
AACCTGGAAATGGAATGACA+TGG - chr5_2:13927676-13927695 None:intergenic 40.0%
! CTAAGAACTCTGTCTTGTTC+TGG - chr5_2:13927708-13927727 None:intergenic 40.0%
ACACATACCTCTGTTTGACA+GGG - chr5_2:13927785-13927804 None:intergenic 40.0%
AACACATACCTCTGTTTGAC+AGG - chr5_2:13927786-13927805 None:intergenic 40.0%
! ACAGAGGTATGTGTTTGAAC+TGG + chr5_2:13927791-13927810 Msa0758590:intron 40.0%
! GAAGTATTTGGAGACAAGGA+TGG + chr5_2:13927982-13928001 Msa0758590:intron 40.0%
!!! CTTCCCTTCCATTTTGAGAT+TGG + chr5_2:13928018-13928037 Msa0758590:intron 40.0%
ACTGCTCAATAACTCTCCTA+AGG + chr5_2:13928121-13928140 Msa0758590:intron 40.0%
CTGCTCAATAACTCTCCTAA+GGG + chr5_2:13928122-13928141 Msa0758590:intron 40.0%
TCCCGTCATTATGTATAGCA+TGG + chr5_2:13928285-13928304 Msa0758590:intron 40.0%
GCCATGCTATACATAATGAC+GGG - chr5_2:13928289-13928308 None:intergenic 40.0%
TAATGCAGGTACATGCAAGT+TGG + chr5_2:13928327-13928346 Msa0758590:intron 40.0%
CTAAACCGAATGTGTATCCA+AGG - chr5_2:13928383-13928402 None:intergenic 40.0%
TTAAAGGGGAGAGTTGTCAA+AGG - chr5_2:13928432-13928451 None:intergenic 40.0%
GACAACTTGGGTACTTAAAG+GGG - chr5_2:13928446-13928465 None:intergenic 40.0%
!! AAGAATGGGCTAGACAACTT+GGG - chr5_2:13928458-13928477 None:intergenic 40.0%
!! AAAGAATGGGCTAGACAACT+TGG - chr5_2:13928459-13928478 None:intergenic 40.0%
AGATAAGGGTGGAAAAGACA+TGG - chr5_2:13928529-13928548 None:intergenic 40.0%
AGAGAAGAGGAAAAGCGAAG+CGG - chr5_2:13922488-13922507 None:intergenic 45.0%
TCGTTCCTCGTTCTTCTCAA+CGG + chr5_2:13922658-13922677 Msa0758590:CDS 45.0%
TTCTTCCGTTGAGAAGAACG+AGG - chr5_2:13922666-13922685 None:intergenic 45.0%
TCCAACGAAGAATGCATCGT+CGG - chr5_2:13922781-13922800 None:intergenic 45.0%
CTTCGTTGGAGAACCTATTC+CGG + chr5_2:13922791-13922810 Msa0758590:CDS 45.0%
! TTCTTTTGAGCTTCATCGGC+CGG - chr5_2:13922813-13922832 None:intergenic 45.0%
! CTCACTCGTTCTTGGTGTAT+CGG - chr5_2:13922845-13922864 None:intergenic 45.0%
! AATGTTGTTTAGGGGGAGGA+AGG + chr5_2:13923696-13923715 Msa0758590:intron 45.0%
GGATTACATCGCTACGATTG+TGG + chr5_2:13923725-13923744 Msa0758590:CDS 45.0%
! GGAGATGTTTGAAACTCCTG+AGG + chr5_2:13923746-13923765 Msa0758590:CDS 45.0%
CTTCGGCTCTGTAAAACCAT+TGG - chr5_2:13923791-13923810 None:intergenic 45.0%
TGCAGGTGATTAAGGACCAT+GGG + chr5_2:13923899-13923918 Msa0758590:intron 45.0%
GTCTCGCTTTCTATTATGGC+AGG - chr5_2:13924316-13924335 None:intergenic 45.0%
CTTATCAGTTGCACGGACAT+TGG - chr5_2:13924365-13924384 None:intergenic 45.0%
GTCCGTGCAACTGATAAGAA+AGG + chr5_2:13924367-13924386 Msa0758590:CDS 45.0%
CCCCTTTCTTATCAGTTGCA+CGG - chr5_2:13924372-13924391 None:intergenic 45.0%
CCGTGCAACTGATAAGAAAG+GGG + chr5_2:13924369-13924388 Msa0758590:CDS 45.0%
! GAAGCTTGAGTGGACTTTAC+TGG + chr5_2:13924426-13924445 Msa0758590:CDS 45.0%
CTGGATTTGTATTCTGGGTG+TGG + chr5_2:13924445-13924464 Msa0758590:CDS 45.0%
!! TGCTTTGGAGCGTCTATTTC+TGG + chr5_2:13924487-13924506 Msa0758590:CDS 45.0%
!! TGACTTGAAGAAATGGGCTG+TGG + chr5_2:13924618-13924637 Msa0758590:intron 45.0%
! AGAAGCTGATGATGAAGCGA+TGG + chr5_2:13924935-13924954 Msa0758590:CDS 45.0%
GGATAATTCATCCGACTCTG+AGG + chr5_2:13924956-13924975 Msa0758590:CDS 45.0%
!! ATCCGACTCTGAGGTATTTG+AGG + chr5_2:13924965-13924984 Msa0758590:CDS 45.0%
AGACTACTCTCCATCTGCTA+TGG + chr5_2:13924993-13925012 Msa0758590:CDS 45.0%
ATTGGGATCACCATAGCAGA+TGG - chr5_2:13925006-13925025 None:intergenic 45.0%
ACCCCTTCTTTCACCTCTAA+TGG + chr5_2:13925435-13925454 Msa0758590:intron 45.0%
!! GAAATTTGCTGGTGGGTTTC+TGG + chr5_2:13925767-13925786 Msa0758590:CDS 45.0%
!! AATTTGCTGGTGGGTTTCTG+GGG + chr5_2:13925769-13925788 Msa0758590:CDS 45.0%
TCAAGCTCGAATGGGAATGA+TGG + chr5_2:13925827-13925846 Msa0758590:CDS 45.0%
! CGGATGCGTGTTTTTCTTTG+GGG + chr5_2:13925879-13925898 Msa0758590:CDS 45.0%
! AAGCAATGGCCTTACTTCAG+TGG - chr5_2:13925913-13925932 None:intergenic 45.0%
CTCGATACAACCTCATGAGT+TGG - chr5_2:13926052-13926071 None:intergenic 45.0%
TGAAAATTGTCAGCTGGCCA+AGG + chr5_2:13926231-13926250 Msa0758590:CDS 45.0%
CCCGTTCAGTTTAAGGATGA+AGG - chr5_2:13926798-13926817 None:intergenic 45.0%
GTGGTATGCTGTATGATCAC+AGG + chr5_2:13926884-13926903 Msa0758590:CDS 45.0%
!! CTTTTTAGGGGGCAAACTTC+AGG + chr5_2:13927043-13927062 Msa0758590:intron 45.0%
CTTTAACAAGCACTCCCTTG+AGG - chr5_2:13927071-13927090 None:intergenic 45.0%
GATGCACTCTTTCAACAGAG+GGG - chr5_2:13927113-13927132 None:intergenic 45.0%
TCCCATGTCATTCCATTTCC+AGG + chr5_2:13927671-13927690 Msa0758590:intron 45.0%
GATGGAGAAGAACCTGGAAA+TGG - chr5_2:13927686-13927705 None:intergenic 45.0%
! GAACTCTGTCTTGTTCTGGA+TGG - chr5_2:13927704-13927723 None:intergenic 45.0%
CCAGACTGCTATAAGCTTTG+CGG + chr5_2:13927759-13927778 Msa0758590:CDS 45.0%
! AAATGCAGTTGCTGTTCCTG+TGG + chr5_2:13928350-13928369 Msa0758590:CDS 45.0%
GAATGTGTATCCAAGGGCAA+GGG - chr5_2:13928376-13928395 None:intergenic 45.0%
CTTGCCCTTGGATACACATT+CGG + chr5_2:13928375-13928394 Msa0758590:CDS 45.0%
GCAATTCAAGGACTCTCTGA+TGG + chr5_2:13928402-13928421 Msa0758590:CDS 45.0%
TTCCAGGGCCTGAATATTCT+TGG - chr5_2:13928574-13928593 None:intergenic 45.0%
GAGAAGAGGAAAAGCGAAGC+GGG - chr5_2:13922487-13922506 None:intergenic 50.0%
! AGGAACGACGTCGTCTTGTT+TGG - chr5_2:13922646-13922665 None:intergenic 50.0%
TCCGACGATGCATTCTTCGT+TGG + chr5_2:13922777-13922796 Msa0758590:CDS 50.0%
! TCGTTCTTGGTGTATCGGTG+AGG - chr5_2:13922840-13922859 None:intergenic 50.0%
GTTTCACTACCGTGAAGCGA+AGG + chr5_2:13922983-13923002 Msa0758590:CDS 50.0%
TACCGTGAAGCGAAGGTTGA+TGG + chr5_2:13922990-13923009 Msa0758590:CDS 50.0%
! ACCGTGAAGCGAAGGTTGAT+GGG + chr5_2:13922991-13923010 Msa0758590:CDS 50.0%
TCCCATCAACCTTCGCTTCA+CGG - chr5_2:13922995-13923014 None:intergenic 50.0%
! GCTGAATGTTGTTTAGGGGG+AGG + chr5_2:13923692-13923711 Msa0758590:intron 50.0%
TTAGGGGGAGGAAGGAAAAG+AGG + chr5_2:13923704-13923723 Msa0758590:intron 50.0%
GTGCAGGTGATTAAGGACCA+TGG + chr5_2:13923898-13923917 Msa0758590:intron 50.0%
! GGCAGGTGCTGTATCAATCA+GGG - chr5_2:13924299-13924318 None:intergenic 50.0%
! TGGCAGGTGCTGTATCAATC+AGG - chr5_2:13924300-13924319 None:intergenic 50.0%
!! ATGTCCACTGGCCTTTGCTT+TGG + chr5_2:13924472-13924491 Msa0758590:CDS 50.0%
GAATGCTGGCAAAGAAGCTG+AGG + chr5_2:13924911-13924930 Msa0758590:CDS 50.0%
GGGCTCCCATGTATCATAAC+TGG - chr5_2:13925165-13925184 None:intergenic 50.0%
ACATACCTCAAGCCCTCGAT+GGG - chr5_2:13925185-13925204 None:intergenic 50.0%
AACATACCTCAAGCCCTCGA+TGG - chr5_2:13925186-13925205 None:intergenic 50.0%
GTGGTGAGACTTACAGGAAG+AGG - chr5_2:13925392-13925411 None:intergenic 50.0%
TGAGGAGTGGTGAGACTTAC+AGG - chr5_2:13925398-13925417 None:intergenic 50.0%
CCACTAACACCTTGACAAGG+TGG - chr5_2:13925618-13925637 None:intergenic 50.0%
! CCACCTTGTCAAGGTGTTAG+TGG + chr5_2:13925615-13925634 Msa0758590:CDS 50.0%
CAGGAACAAAAATGCGCCGT+TGG + chr5_2:13925650-13925669 Msa0758590:CDS 50.0%
GAACAAAAATGCGCCGTTGG+AGG + chr5_2:13925653-13925672 Msa0758590:CDS 50.0%
!! TTTCTGGGGCGTTATGCTGT+GGG + chr5_2:13925783-13925802 Msa0758590:CDS 50.0%
GAATGGGAATGATGGCTGCA+GGG + chr5_2:13925835-13925854 Msa0758590:CDS 50.0%
ATGATGGCTGCAGGGTCATA+TGG + chr5_2:13925843-13925862 Msa0758590:CDS 50.0%
CACGCATCCGAAATTGAGGA+AGG - chr5_2:13925869-13925888 None:intergenic 50.0%
GAGCTCTTGCCACTGAAGTA+AGG + chr5_2:13925901-13925920 Msa0758590:intron 50.0%
! GGCCAAGGCATTAAACCTTG+AGG + chr5_2:13926246-13926265 Msa0758590:CDS 50.0%
GACTCTCAAAGTGCACCAAG+TGG + chr5_2:13926865-13926884 Msa0758590:CDS 50.0%
GCAAACTTCAGGGACCTCAA+GGG + chr5_2:13927054-13927073 Msa0758590:CDS 50.0%
GCTGAACACAACAGGCCATT+TGG + chr5_2:13927353-13927372 Msa0758590:intron 50.0%
! ACAGGCCATTTGGTCGACTT+TGG + chr5_2:13927363-13927382 Msa0758590:intron 50.0%
! GCCATTTGGTCGACTTTGGT+GGG + chr5_2:13927367-13927386 Msa0758590:CDS 50.0%
TCCCACCAAAGTCGACCAAA+TGG - chr5_2:13927371-13927390 None:intergenic 50.0%
! GTTCTGGATGGAGAAGAACC+TGG - chr5_2:13927692-13927711 None:intergenic 50.0%
CGAGAGAATGCAAGGCTACA+AGG + chr5_2:13927732-13927751 Msa0758590:CDS 50.0%
CCGCAAAGCTTATAGCAGTC+TGG - chr5_2:13927762-13927781 None:intergenic 50.0%
CGAATGTGTATCCAAGGGCA+AGG - chr5_2:13928377-13928396 None:intergenic 50.0%
AGCCAAGAATATTCAGGCCC+TGG + chr5_2:13928569-13928588 Msa0758590:three_prime_UTR 50.0%
TGAGCTTCATCGGCCGGAAT+AGG - chr5_2:13922807-13922826 None:intergenic 55.0%
AGTTGCACGGACATTGGACC+CGG - chr5_2:13924359-13924378 None:intergenic 55.0%
TGATACATGGGAGCCCATCG+AGG + chr5_2:13925169-13925188 Msa0758590:CDS 55.0%
GATACATGGGAGCCCATCGA+GGG + chr5_2:13925170-13925189 Msa0758590:CDS 55.0%
!! GTTTCTGGGGCGTTATGCTG+TGG + chr5_2:13925782-13925801 Msa0758590:CDS 55.0%
TTATGCTGTGGGCCGTCTAG+TGG + chr5_2:13925794-13925813 Msa0758590:CDS 55.0%
CGAATGGGAATGATGGCTGC+AGG + chr5_2:13925834-13925853 Msa0758590:CDS 55.0%
GGCAAACTTCAGGGACCTCA+AGG + chr5_2:13927053-13927072 Msa0758590:CDS 55.0%
! GGCCATTTGGTCGACTTTGG+TGG + chr5_2:13927366-13927385 Msa0758590:intron 55.0%
AAGGGCCGAGCCTCATAATC+AGG + chr5_2:13927415-13927434 Msa0758590:CDS 55.0%
TTTGCGGCCCTGTCAAACAG+AGG + chr5_2:13927775-13927794 Msa0758590:CDS 55.0%
!! CACTGAGCGGGTTGAAGTGC+CGG + chr5_2:13922414-13922433 Msa0758590:five_prime_UTR 60.0%
!! ACTGAGCGGGTTGAAGTGCC+GGG + chr5_2:13922415-13922434 Msa0758590:five_prime_UTR 60.0%
GGGTGTGGAGCTATGTCCAC+TGG + chr5_2:13924460-13924479 Msa0758590:CDS 60.0%
CGCTCCAAAGCAAAGGCCAG+TGG - chr5_2:13924479-13924498 None:intergenic 60.0%
!! TGTGGTGGGCCACCTTGTCA+AGG + chr5_2:13925606-13925625 Msa0758590:CDS 60.0%
TATCCAAGGGCAAGGGCCAC+AGG - chr5_2:13928369-13928388 None:intergenic 60.0%
GTTCCTGTGGCCCTTGCCCT+TGG + chr5_2:13928363-13928382 Msa0758590:CDS 65.0%
GGGAGCCCATCGAGGGCTTG+AGG + chr5_2:13925177-13925196 Msa0758590:CDS 70.0%
Chromosome Type Strat End Strand Name
chr5_2 gene 13922410 13928737 13922410 ID=Msa0758590;Name=Msa0758590
chr5_2 mRNA 13922410 13928737 13922410 ID=Msa0758590-mRNA-1;Parent=Msa0758590;Name=Msa0758590-mRNA-1;_AED=0.15;_eAED=0.15;_QI=205|1|1|1|1|1|20|228|835
chr5_2 exon 13922410 13922859 13922410 ID=Msa0758590-mRNA-1:exon:6266;Parent=Msa0758590-mRNA-1
chr5_2 exon 13922950 13923049 13922950 ID=Msa0758590-mRNA-1:exon:6267;Parent=Msa0758590-mRNA-1
chr5_2 exon 13923708 13923815 13923708 ID=Msa0758590-mRNA-1:exon:6268;Parent=Msa0758590-mRNA-1
chr5_2 exon 13923904 13924023 13923904 ID=Msa0758590-mRNA-1:exon:6269;Parent=Msa0758590-mRNA-1
chr5_2 exon 13924120 13924210 13924120 ID=Msa0758590-mRNA-1:exon:6270;Parent=Msa0758590-mRNA-1
chr5_2 exon 13924311 13924525 13924311 ID=Msa0758590-mRNA-1:exon:6271;Parent=Msa0758590-mRNA-1
chr5_2 exon 13924628 13924693 13924628 ID=Msa0758590-mRNA-1:exon:6272;Parent=Msa0758590-mRNA-1
chr5_2 exon 13924807 13925055 13924807 ID=Msa0758590-mRNA-1:exon:6273;Parent=Msa0758590-mRNA-1
chr5_2 exon 13925140 13925198 13925140 ID=Msa0758590-mRNA-1:exon:6274;Parent=Msa0758590-mRNA-1
chr5_2 exon 13925331 13925397 13925331 ID=Msa0758590-mRNA-1:exon:6275;Parent=Msa0758590-mRNA-1
chr5_2 exon 13925588 13925917 13925588 ID=Msa0758590-mRNA-1:exon:6276;Parent=Msa0758590-mRNA-1
chr5_2 exon 13926028 13926096 13926028 ID=Msa0758590-mRNA-1:exon:6277;Parent=Msa0758590-mRNA-1
chr5_2 exon 13926205 13926291 13926205 ID=Msa0758590-mRNA-1:exon:6278;Parent=Msa0758590-mRNA-1
chr5_2 exon 13926392 13926479 13926392 ID=Msa0758590-mRNA-1:exon:6279;Parent=Msa0758590-mRNA-1
chr5_2 exon 13926845 13926963 13926845 ID=Msa0758590-mRNA-1:exon:6280;Parent=Msa0758590-mRNA-1
chr5_2 exon 13927051 13927152 13927051 ID=Msa0758590-mRNA-1:exon:6281;Parent=Msa0758590-mRNA-1
chr5_2 exon 13927232 13927275 13927232 ID=Msa0758590-mRNA-1:exon:6282;Parent=Msa0758590-mRNA-1
chr5_2 exon 13927367 13927436 13927367 ID=Msa0758590-mRNA-1:exon:6283;Parent=Msa0758590-mRNA-1
chr5_2 exon 13927693 13927796 13927693 ID=Msa0758590-mRNA-1:exon:6284;Parent=Msa0758590-mRNA-1
chr5_2 exon 13928335 13928737 13928335 ID=Msa0758590-mRNA-1:exon:6285;Parent=Msa0758590-mRNA-1
chr5_2 five_prime_UTR 13922410 13922614 13922410 ID=Msa0758590-mRNA-1:five_prime_utr;Parent=Msa0758590-mRNA-1
chr5_2 CDS 13922615 13922859 13922615 ID=Msa0758590-mRNA-1:cds;Parent=Msa0758590-mRNA-1
chr5_2 CDS 13922950 13923049 13922950 ID=Msa0758590-mRNA-1:cds;Parent=Msa0758590-mRNA-1
chr5_2 CDS 13923708 13923815 13923708 ID=Msa0758590-mRNA-1:cds;Parent=Msa0758590-mRNA-1
chr5_2 CDS 13923904 13924023 13923904 ID=Msa0758590-mRNA-1:cds;Parent=Msa0758590-mRNA-1
chr5_2 CDS 13924120 13924210 13924120 ID=Msa0758590-mRNA-1:cds;Parent=Msa0758590-mRNA-1
chr5_2 CDS 13924311 13924525 13924311 ID=Msa0758590-mRNA-1:cds;Parent=Msa0758590-mRNA-1
chr5_2 CDS 13924628 13924693 13924628 ID=Msa0758590-mRNA-1:cds;Parent=Msa0758590-mRNA-1
chr5_2 CDS 13924807 13925055 13924807 ID=Msa0758590-mRNA-1:cds;Parent=Msa0758590-mRNA-1
chr5_2 CDS 13925140 13925198 13925140 ID=Msa0758590-mRNA-1:cds;Parent=Msa0758590-mRNA-1
chr5_2 CDS 13925331 13925397 13925331 ID=Msa0758590-mRNA-1:cds;Parent=Msa0758590-mRNA-1
chr5_2 CDS 13925588 13925917 13925588 ID=Msa0758590-mRNA-1:cds;Parent=Msa0758590-mRNA-1
chr5_2 CDS 13926028 13926096 13926028 ID=Msa0758590-mRNA-1:cds;Parent=Msa0758590-mRNA-1
chr5_2 CDS 13926205 13926291 13926205 ID=Msa0758590-mRNA-1:cds;Parent=Msa0758590-mRNA-1
chr5_2 CDS 13926392 13926479 13926392 ID=Msa0758590-mRNA-1:cds;Parent=Msa0758590-mRNA-1
chr5_2 CDS 13926845 13926963 13926845 ID=Msa0758590-mRNA-1:cds;Parent=Msa0758590-mRNA-1
chr5_2 CDS 13927051 13927152 13927051 ID=Msa0758590-mRNA-1:cds;Parent=Msa0758590-mRNA-1
chr5_2 CDS 13927232 13927275 13927232 ID=Msa0758590-mRNA-1:cds;Parent=Msa0758590-mRNA-1
chr5_2 CDS 13927367 13927436 13927367 ID=Msa0758590-mRNA-1:cds;Parent=Msa0758590-mRNA-1
chr5_2 CDS 13927693 13927796 13927693 ID=Msa0758590-mRNA-1:cds;Parent=Msa0758590-mRNA-1
chr5_2 CDS 13928335 13928509 13928335 ID=Msa0758590-mRNA-1:cds;Parent=Msa0758590-mRNA-1
chr5_2 three_prime_UTR 13928510 13928737 13928510 ID=Msa0758590-mRNA-1:three_prime_utr;Parent=Msa0758590-mRNA-1
Gene Sequence

>Msa0758590

ATGCCTAAAAAACGCGTTCGTAAATCTTCCAAACAAGACGACGTCGTTCCTCGTTCTTCTCAACGGAAGAAATCCAAAAAATCTCCTGTTAATCCCGTTGAAGAAGAACTGGTTTCTCTCCTTCCTTCTAGAAGAAAGAAAGCGAAGCAATCTTCGGTCAATTCCGACGATGCATTCTTCGTTGGAGAACCTATTCCGGCCGATGAAGCTCAAAAGAAATGGCCTCACCGATACACCAAGAACGATGAATCGAGTGAGGATGAAAGTTTGAAGGCGAAGTTTCACTACCGTGAAGCGAAGGTTGATGGGATTTTATATAAGCTGGAGGATAATGCTTATGTCAAGGGGGAGGAAGGAAAAGAGGATTACATCGCTACGATTGTGGAGATGTTTGAAACTCCTGAGGAAGAACAATATTTTACTGCCCAATGGTTTTACAGAGCCGAAGACACTGTGATTAAGGACCATGGGAATCTAGTTGACAAAAAGAGGATTTTTAAATCTGATGTAAAAGATGAAAATCCTTTAGATTGTTTAGTTAGGAAAATAAACATTGTACAAATTTCTCCTGATGCTGCAAAAAAGAAGAAATTTCCTCCTTGTGACTTCTATTTTGATATGAAGTACACTGTGCCATATTTAACTTTCGCTAACATTGACAATGCACCTGCCATAATAGAAAGCGAGACTTCAACACTTTCAAGTGAATCCGGGTCCAATGTCCGTGCAACTGATAAGAAAGGGGTTAAAGAAAAACCAACTCAACTTAAAGAATCTAAGAAGCTTGAGTGGACTTTACTGGATTTGTATTCTGGGTGTGGAGCTATGTCCACTGGCCTTTGCTTTGGAGCGTCTATTTCTGGCATTAAGCTTGTGACGAAATGGGCTGTGGATATAAATGAACATGCTTGCGAGAGTCTAAAGCTGAATCACCCAGAAACACACGTGAGGAATGAACCCACAGAAGACTTTTTAAGTCTCCTAAAAGAGTGGGCTAAGCTTTGTGACGAGTTTGTACTGAATGGAGCAGAAAGTACAGATTCTGATTTGAATGCTGGCAAAGAAGCTGAGGAAGAAGCTGATGATGAAGCGATGGATAATTCATCCGACTCTGAGGTATTTGAGGTTGAAAGACTACTCTCCATCTGCTATGGTGATCCCAATGAAGATGAAAAACCAGGACTTTATTTTAAAGTGCATTGGAAGGGTTACGATTCCAGTTATGATACATGGGAGCCCATCGAGGGCTTGAGCGAGTGTAAAGATGCTATGAAAGATTTTGTTATAAATGGATATAAGGAAAAGATACTGCCTCTTCCTGGCCAAGCTGATTTTATTTGTGGTGGGCCACCTTGTCAAGGTGTTAGTGGTTTCAATCGCTTCAGGAACAAAAATGCGCCGTTGGAGGATGAAAAAAATAAGCAATTAATTGTTTACATGAACATTATTGATTTCTTGAAGCCTAAGTATGTTCTGATGGAGAATGTTGTAGACATTTTGAAATTTGCTGGTGGGTTTCTGGGGCGTTATGCTGTGGGCCGTCTAGTGGCCATGAATTATCAAGCTCGAATGGGAATGATGGCTGCAGGGTCATATGGCCTTCCTCAATTTCGGATGCGTGTTTTTCTTTGGGGAGCTCTTGCCACTGAAAAATTACCGTCATATCTGTTACCAACTCATGAGGTTGTATCGAGATCAGTCATCCCCACTGAGTTTGAAGAAATTACAGTCGCATATTCCACTAATGAAAATTGTCAGCTGGCCAAGGCATTAAACCTTGAGGATGCAATTAATGATCTCCCACCAGTTGAAAATGATGATAGCGATGATGAAAGGAGCTATGGGACTACTCCTCGTACTGATTTTCAAAAATATATCAGATTAAAGAGAAGTGAGATGGTGAATTATTCTGCTGACTCTCAAAGTGCACCAAGTGGTATGCTGTATGATCACAGGCCTTTGAAATTAAATACCGATGACTATGAGAGAGTTTGCCACATTCCAAAGAAGAAGGGGGCAAACTTCAGGGACCTCAAGGGAGTGCTTGTTAAAGAAAACAAGGTGGAATGGGACCCCTCTGTTGAAAGAGTGCATCTAAAATCTGGAAAGCCTTTGGTTCCAGATTATGCAATGACATTTGTTCGTGGGACCTCTTCTAAGCCATTTGGTCGACTTTGGTGGGACGAAATTGTGTCTACTGTTGTAACAAGGGCCGAGCCTCATAATCAGGTTCTTCTCCATCCAGAACAAGACAGAGTTCTTAGTATTCGAGAGAATGCAAGGCTACAAGGATTTCCAGACTGCTATAAGCTTTGCGGCCCTGTCAAACAGAGGTACATGCAAGTTGGAAATGCAGTTGCTGTTCCTGTGGCCCTTGCCCTTGGATACACATTCGGTTTAGCAATTCAAGGACTCTCTGATGGCAGTCCTTTGACAACTCTCCCCTTTAAGTACCCAAGTTGTCTAGCCCATTCTTTAGATGTAGTTGATGATGATGGCTCAAGCTGA
Protein sequence

>Msa0758590

MPKKRVRKSSKQDDVVPRSSQRKKSKKSPVNPVEEELVSLLPSRRKKAKQSSVNSDDAFFVGEPIPADEAQKKWPHRYTKNDESSEDESLKAKFHYREAKVDGILYKLEDNAYVKGEEGKEDYIATIVEMFETPEEEQYFTAQWFYRAEDTVIKDHGNLVDKKRIFKSDVKDENPLDCLVRKINIVQISPDAAKKKKFPPCDFYFDMKYTVPYLTFANIDNAPAIIESETSTLSSESGSNVRATDKKGVKEKPTQLKESKKLEWTLLDLYSGCGAMSTGLCFGASISGIKLVTKWAVDINEHACESLKLNHPETHVRNEPTEDFLSLLKEWAKLCDEFVLNGAESTDSDLNAGKEAEEEADDEAMDNSSDSEVFEVERLLSICYGDPNEDEKPGLYFKVHWKGYDSSYDTWEPIEGLSECKDAMKDFVINGYKEKILPLPGQADFICGGPPCQGVSGFNRFRNKNAPLEDEKNKQLIVYMNIIDFLKPKYVLMENVVDILKFAGGFLGRYAVGRLVAMNYQARMGMMAAGSYGLPQFRMRVFLWGALATEKLPSYLLPTHEVVSRSVIPTEFEEITVAYSTNENCQLAKALNLEDAINDLPPVENDDSDDERSYGTTPRTDFQKYIRLKRSEMVNYSADSQSAPSGMLYDHRPLKLNTDDYERVCHIPKKKGANFRDLKGVLVKENKVEWDPSVERVHLKSGKPLVPDYAMTFVRGTSSKPFGRLWWDEIVSTVVTRAEPHNQVLLHPEQDRVLSIRENARLQGFPDCYKLCGPVKQRYMQVGNAVAVPVALALGYTFGLAIQGLSDGSPLTTLPFKYPSCLAHSLDVVDDDGSS*