Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1191830 | CAA61298.1 | 92.598 | 635 | 9 | 1 | 1 | 597 | 1 | 635 | 0.0 | 744 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1191830 | sp|Q7XTT4|NUCL2_ORYSJ | 55.187 | 241 | 93 | 7 | 301 | 531 | 408 | 643 | 1.63e-73 | 252 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0044890 | Msa1191830 | 0.837110 | 6.304517e-57 | -8.615850e-47 |
| Msa0068970 | Msa1191830 | 0.829326 | 5.481089e-55 | -8.615850e-47 |
| Msa0627380 | Msa1191830 | 0.807559 | 4.765011e-50 | -8.615850e-47 |
| Msa0648780 | Msa1191830 | 0.858500 | 7.894228e-63 | -8.615850e-47 |
| Msa0659050 | Msa1191830 | 0.835787 | 1.369237e-56 | -8.615850e-47 |
| Msa0687440 | Msa1191830 | 0.901858 | 1.750397e-78 | -8.615850e-47 |
| Msa0704980 | Msa1191830 | 0.863151 | 3.054907e-64 | -8.615850e-47 |
| Msa0709730 | Msa1191830 | 0.818201 | 2.217649e-52 | -8.615850e-47 |
| Msa0745740 | Msa1191830 | 0.810455 | 1.142798e-50 | -8.615850e-47 |
| Msa0837020 | Msa1191830 | 0.806124 | 9.578214e-50 | -8.615850e-47 |
| Msa0164770 | Msa1191830 | 0.865426 | 5.958559e-65 | -8.615850e-47 |
| Msa0170200 | Msa1191830 | 0.805422 | 1.345161e-49 | -8.615850e-47 |
| Msa0375310 | Msa1191830 | 0.849485 | 3.137324e-60 | -8.615850e-47 |
| Msa0421500 | Msa1191830 | 0.846711 | 1.830001e-59 | -8.615850e-47 |
| Msa1027640 | Msa1191830 | 0.807764 | 4.309797e-50 | -8.615850e-47 |
| Msa1037610 | Msa1191830 | 0.801104 | 1.053748e-48 | -8.615850e-47 |
| Msa1066190 | Msa1191830 | 0.822070 | 2.883069e-53 | -8.615850e-47 |
| Msa0270550 | Msa1191830 | 0.821912 | 3.137866e-53 | -8.615850e-47 |
| Msa1191830 | Msa1209850 | 0.821031 | 5.010346e-53 | -8.615850e-47 |
| Msa1191830 | Msa1218110 | 0.813745 | 2.190674e-51 | -8.615850e-47 |
| Msa1191830 | Msa1258390 | 0.818449 | 1.948633e-52 | -8.615850e-47 |
| Msa1191830 | Msa1275680 | 0.822155 | 2.756180e-53 | -8.615850e-47 |
| Msa1191830 | Msa1330560 | 0.849665 | 2.795264e-60 | -8.615850e-47 |
| Msa1191830 | Msa1341130 | 0.807815 | 4.203066e-50 | -8.615850e-47 |
| Msa1191830 | Msa1353430 | 0.843622 | 1.251176e-58 | -8.615850e-47 |
| Msa1191830 | Msa1418690 | 0.822188 | 2.707116e-53 | -8.615850e-47 |
| Msa0485510 | Msa1191830 | 0.805943 | 1.045777e-49 | -8.615850e-47 |
| Msa0486070 | Msa1191830 | 0.848354 | 6.467470e-60 | -8.615850e-47 |
| Msa0513990 | Msa1191830 | 0.830976 | 2.168008e-55 | -8.615850e-47 |
| Msa0861860 | Msa1191830 | 0.801488 | 8.793303e-49 | -8.615850e-47 |
| Msa0966210 | Msa1191830 | 0.842397 | 2.652026e-58 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1191830 | MtrunA17_Chr4g0038111 | 82.210 | 534 | 43 | 4 | 29 | 523 | 4 | 524 | 0.0 | 619 |
| Msa1191830 | MtrunA17_Chr1g0163591 | 42.636 | 258 | 119 | 6 | 307 | 546 | 415 | 661 | 2.84e-41 | 159 |
| Msa1191830 | MtrunA17_Chr1g0163591 | 49.306 | 144 | 68 | 4 | 314 | 453 | 269 | 411 | 5.18e-35 | 140 |
| Msa1191830 | MtrunA17_Chr8g0350331 | 88.000 | 75 | 9 | 0 | 32 | 106 | 8 | 82 | 2.00e-23 | 95.5 |
| Msa1191830 | MtrunA17_Chr3g0098471 | 40.179 | 224 | 60 | 6 | 173 | 392 | 30 | 183 | 1.47e-22 | 95.5 |
| Msa1191830 | MtrunA17_Chr3g0098471 | 48.673 | 113 | 21 | 5 | 29 | 139 | 22 | 99 | 1.98e-12 | 66.2 |
| Msa1191830 | MtrunA17_Chr1g0212611 | 26.087 | 207 | 132 | 6 | 326 | 527 | 206 | 396 | 4.76e-15 | 78.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1191830 | AT3G18610.1 | 49.673 | 306 | 124 | 12 | 303 | 597 | 349 | 635 | 1.32e-72 | 245 |
| Msa1191830 | AT3G18610.2 | 49.673 | 306 | 124 | 12 | 303 | 597 | 289 | 575 | 1.57e-72 | 243 |
| Msa1191830 | AT3G18610.3 | 49.673 | 306 | 124 | 12 | 303 | 597 | 319 | 605 | 1.61e-72 | 244 |
| Msa1191830 | AT1G45100.1 | 45.238 | 84 | 46 | 0 | 327 | 410 | 236 | 319 | 5.50e-12 | 68.9 |
Find 181 sgRNAs with CRISPR-Local
Find 352 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAACAACTTATCTTCCATTT+TGG | 0.105937 | 8_1:+36670264 | Msa1191830:three_prime_UTR |
| AAAGAAAGGGGTTAGGGTTT+TGG | 0.191255 | 8_1:-36665362 | None:intergenic |
| CCTGCGGCTGAGAGAGAATT+AGG | 0.197955 | 8_1:-36665453 | None:intergenic |
| TAACCAGATTCATAATCTTT+AGG | 0.228104 | 8_1:-36669537 | None:intergenic |
| AACCAGATTCATAATCTTTA+GGG | 0.230306 | 8_1:-36669536 | None:intergenic |
| CTGGTCTCATTTGGTGTAGC+TGG | 0.234972 | 8_1:-36668700 | None:intergenic |
| GCTAAATTGATGGAGCATTT+TGG | 0.237940 | 8_1:+36669480 | Msa1191830:CDS |
| GATGGGGATGGAGTATTTAA+AGG | 0.245284 | 8_1:+36668915 | Msa1191830:CDS |
| GAAGAATCATCTTTCTTTGC+AGG | 0.246216 | 8_1:-36667278 | None:intergenic |
| AGTAATTACCTATTATTATT+AGG | 0.251107 | 8_1:-36669173 | None:intergenic |
| TTTGGTGTAGCTGGGGTATT+AGG | 0.268355 | 8_1:-36668691 | None:intergenic |
| TTCACTAACCTCTTTCTTAG+AGG | 0.273370 | 8_1:-36668082 | None:intergenic |
| CAGTCATATATGATGGATAT+TGG | 0.289338 | 8_1:+36670413 | Msa1191830:three_prime_UTR |
| CTGAGAGAGAATTAGGGTTT+TGG | 0.292852 | 8_1:-36665446 | None:intergenic |
| ATGGTTGATGCTGGCAAATC+TGG | 0.301012 | 8_1:+36668555 | Msa1191830:CDS |
| CTGGCCTCTTCCACCACTTT+GGG | 0.301540 | 8_1:-36669281 | None:intergenic |
| GGAATTGTGAGAAGAGAGTT+AGG | 0.312137 | 8_1:-36665397 | None:intergenic |
| CATTTACTCCTAATAATAAT+AGG | 0.329724 | 8_1:+36669165 | Msa1191830:CDS |
| CCTCTGAAGTGGTCTCTGGC+TGG | 0.335134 | 8_1:-36666707 | None:intergenic |
| GGTGGAAGAAGCGGTGGTTT+TGG | 0.341448 | 8_1:+36669848 | Msa1191830:CDS |
| GAACTTGCAGCTTTCTTTGT+GGG | 0.341562 | 8_1:-36667717 | None:intergenic |
| TCAGATAAGAGCTAAATTGA+TGG | 0.346839 | 8_1:+36669470 | Msa1191830:intron |
| ATTGATAACACCTCAGAAAA+AGG | 0.351570 | 8_1:+36668415 | Msa1191830:CDS |
| ATCCCTAAAGATTATGAATC+TGG | 0.352672 | 8_1:+36669534 | Msa1191830:CDS |
| GCGGATTTCTTGCTTGATTT+AGG | 0.360381 | 8_1:-36665535 | None:intergenic |
| GATGGAGTATTTAAAGGCTT+TGG | 0.363032 | 8_1:+36668921 | Msa1191830:CDS |
| TATACGAAAAGAAAGGGGTT+AGG | 0.363593 | 8_1:-36665369 | None:intergenic |
| TTAGCTGGGGTCTTCTTTGA+AGG | 0.364114 | 8_1:-36666663 | None:intergenic |
| TTAGGGATTGACACCCTTGT+AGG | 0.366397 | 8_1:-36669519 | None:intergenic |
| TTTGAGCCACTGGTCTCATT+TGG | 0.369919 | 8_1:-36668709 | None:intergenic |
| TGTTCACAGGTTTGCATACA+TGG | 0.371589 | 8_1:+36669667 | Msa1191830:intron |
| GGAAGAGGAGGAGGTCGATT+TGG | 0.372331 | 8_1:+36669884 | Msa1191830:CDS |
| ACCTTGACTATCTCTAGGTT+TGG | 0.378375 | 8_1:-36669774 | None:intergenic |
| CTCTGAAGTGGTCTCTGGCT+GGG | 0.379329 | 8_1:-36666706 | None:intergenic |
| AGGAGTGGTGGTGGTCGGTT+TGG | 0.388447 | 8_1:+36669821 | Msa1191830:CDS |
| ATGCTAATAGCTTACACTTT+GGG | 0.402090 | 8_1:-36668973 | None:intergenic |
| ACTGGCCTCTTCCACCACTT+TGG | 0.404674 | 8_1:-36669282 | None:intergenic |
| GCTCAAAGACATTATTTGTT+GGG | 0.408855 | 8_1:+36668725 | Msa1191830:CDS |
| TATCCGAGCTTGCAGATGTT+TGG | 0.409957 | 8_1:+36670448 | Msa1191830:three_prime_UTR |
| AGGAGTGGTGGAAGAGGAGG+AGG | 0.413886 | 8_1:+36669875 | Msa1191830:CDS |
| GATTCCTCTGAAGTGGTCTC+TGG | 0.415465 | 8_1:-36666711 | None:intergenic |
| GGTGGTCGGTTTGGTGGAGG+TGG | 0.420688 | 8_1:+36669830 | Msa1191830:CDS |
| CCTAGAGATAGTCAAGGTTC+TGG | 0.420795 | 8_1:+36669779 | Msa1191830:CDS |
| CACTTTCACTTCTTCCTCAT+CGG | 0.423606 | 8_1:-36666754 | None:intergenic |
| GAGGAGGTCGATTTGGTGGA+AGG | 0.425269 | 8_1:+36669891 | Msa1191830:CDS |
| TGGTCTCATTTGGTGTAGCT+GGG | 0.430539 | 8_1:-36668699 | None:intergenic |
| AGTCTCAAACAGTATTTGTC+AGG | 0.432245 | 8_1:+36669302 | Msa1191830:CDS |
| GAGCACGATGCAACAGTTCT+TGG | 0.434082 | 8_1:-36669112 | None:intergenic |
| ATACGAAAAGAAAGGGGTTA+GGG | 0.440248 | 8_1:-36665368 | None:intergenic |
| GTTGTTTCTCCAGTGAAGTC+TGG | 0.441415 | 8_1:+36665679 | Msa1191830:CDS |
| GAAGGAACAGCTTTAGCTGC+AGG | 0.441481 | 8_1:-36667239 | None:intergenic |
| AGTGGTGGTGGTCGGTTTGG+TGG | 0.441503 | 8_1:+36669824 | Msa1191830:CDS |
| CGCCAAGCAAAAGGCGTTGA+AGG | 0.441849 | 8_1:+36666440 | Msa1191830:CDS |
| GAAAATTTCTTCCAAGGTTG+CGG | 0.442385 | 8_1:+36668864 | Msa1191830:CDS |
| AACGTTTCACGTCGAAGGAC+AGG | 0.443778 | 8_1:-36668750 | None:intergenic |
| GGTGGTAGGAGTGGTGGAAG+AGG | 0.445088 | 8_1:+36669869 | Msa1191830:CDS |
| GGTAGGAGTGGTGGAAGAGG+AGG | 0.445688 | 8_1:+36669872 | Msa1191830:CDS |
| GGAAGGGATAGTGGCGGTAG+AGG | 0.446801 | 8_1:+36669908 | Msa1191830:CDS |
| CCTTTCTTTCCAGACTTCAC+TGG | 0.449206 | 8_1:-36665688 | None:intergenic |
| CGATTTGGTGGAAGGGATAG+TGG | 0.450518 | 8_1:+36669899 | Msa1191830:CDS |
| GGTGGTGGTCGGTTTGGTGG+AGG | 0.451219 | 8_1:+36669827 | Msa1191830:CDS |
| GGTTCTGGTGGTAGAGGTGG+AGG | 0.454259 | 8_1:+36669794 | Msa1191830:CDS |
| GGCTCAAAGACATTATTTGT+TGG | 0.457432 | 8_1:+36668724 | Msa1191830:CDS |
| GGGGTCTTCTTTGAAGGAGC+AGG | 0.459580 | 8_1:-36666657 | None:intergenic |
| GACTTGATTTAGCTCGGGAG+AGG | 0.461620 | 8_1:+36669138 | Msa1191830:CDS |
| TCTGGTGGTAGAGGTGGAGG+TGG | 0.461700 | 8_1:+36669797 | Msa1191830:CDS |
| CTCTCCGACTTGATTTAGCT+CGG | 0.462101 | 8_1:+36669132 | Msa1191830:CDS |
| ACATTTACTAGTATAACTTT+AGG | 0.463177 | 8_1:+36670524 | Msa1191830:three_prime_UTR |
| ATCTTCATCGGATTCTTCAT+CGG | 0.463604 | 8_1:-36667754 | None:intergenic |
| GTGGTAGAGGTGGAGGTGGA+AGG | 0.463792 | 8_1:+36669801 | Msa1191830:CDS |
| AGAGGAGGAGGTCGATTTGG+TGG | 0.465575 | 8_1:+36669887 | Msa1191830:CDS |
| CAACAACCTCTCCGCAACCT+TGG | 0.467608 | 8_1:-36668875 | None:intergenic |
| CTGCGGCTGAGAGAGAATTA+GGG | 0.468196 | 8_1:-36665452 | None:intergenic |
| CTTCATGAAAGTGAACTTGA+TGG | 0.468232 | 8_1:+36669728 | Msa1191830:CDS |
| GGAGGTGGAAGGAGTGGTGG+TGG | 0.477011 | 8_1:+36669812 | Msa1191830:CDS |
| AGAGGTGGTCGAGGAGGAAG+AGG | 0.478640 | 8_1:+36669926 | Msa1191830:CDS |
| AGAGGTTGCCGCCAAGCAAA+AGG | 0.479123 | 8_1:+36666431 | Msa1191830:CDS |
| TAAGAAAGAGGTTAGTGAAT+CGG | 0.481358 | 8_1:+36668086 | Msa1191830:CDS |
| TTCAGAGAAAATTTCTTCCA+AGG | 0.486230 | 8_1:+36668858 | Msa1191830:intron |
| TTAACTCACTTCATCTTCAT+CGG | 0.487222 | 8_1:-36667766 | None:intergenic |
| GTACTTGTGGGGAACCTACA+AGG | 0.489480 | 8_1:+36669505 | Msa1191830:CDS |
| AGAGGTGGAGGTGGAAGGAG+TGG | 0.489917 | 8_1:+36669806 | Msa1191830:CDS |
| ACTTTAGGCATGTGAAAAGA+AGG | 0.493288 | 8_1:+36670539 | Msa1191830:three_prime_UTR |
| TGTTGATGTACGTCTTGCTT+CGG | 0.495897 | 8_1:+36668893 | Msa1191830:CDS |
| AGAACTTGCAGCTTTCTTTG+TGG | 0.496340 | 8_1:-36667718 | None:intergenic |
| AGAACTATCATCTTTCTTTG+CGG | 0.496659 | 8_1:-36667501 | None:intergenic |
| ATGTACGTCTTGCTTCGGAT+GGG | 0.500671 | 8_1:+36668898 | Msa1191830:CDS |
| AGTCAAGGTTCTGGTGGTAG+AGG | 0.500732 | 8_1:+36669788 | Msa1191830:CDS |
| CGTCTTGCTTCGGATGGGGA+TGG | 0.500867 | 8_1:+36668903 | Msa1191830:CDS |
| ATACCTTCAGAAGCAAAGCT+TGG | 0.501215 | 8_1:-36669971 | None:intergenic |
| CCTAATTCTCTCTCAGCCGC+AGG | 0.502199 | 8_1:+36665453 | Msa1191830:five_prime_UTR |
| AAATAATGTCTTTGAGCCAC+TGG | 0.502495 | 8_1:-36668719 | None:intergenic |
| CGAGGAGGAAGAGGTGGTCG+TGG | 0.503442 | 8_1:+36669935 | Msa1191830:CDS |
| CCAGTGAAGTCTGGAAAGAA+AGG | 0.505222 | 8_1:+36665688 | Msa1191830:CDS |
| TAATAGGCACTTGAGATGAA+TGG | 0.505941 | 8_1:+36669089 | Msa1191830:intron |
| ACCTCTTTCTTAGAGGCCAC+AGG | 0.507804 | 8_1:-36668075 | None:intergenic |
| TTCACTGGAGAAACAACAAC+AGG | 0.510600 | 8_1:-36665673 | None:intergenic |
| CTCTGAGGAATCTGAGGATG+AGG | 0.511350 | 8_1:+36666497 | Msa1191830:CDS |
| GGTGGAGGTGGAAGGAGTGG+TGG | 0.513178 | 8_1:+36669809 | Msa1191830:CDS |
| ACTTGATTTAGCTCGGGAGA+GGG | 0.513360 | 8_1:+36669139 | Msa1191830:CDS |
| GTGGAAGGAGTGGTGGTGGT+CGG | 0.513471 | 8_1:+36669816 | Msa1191830:CDS |
| TCAGCCCAAAGTGGTGGAAG+AGG | 0.519792 | 8_1:+36669277 | Msa1191830:CDS |
| TAACCAAACATCTGCAAGCT+CGG | 0.520652 | 8_1:-36670451 | None:intergenic |
| AAACCAAGCTTTGCTTCTGA+AGG | 0.523386 | 8_1:+36669968 | Msa1191830:CDS |
| GTCAGAACGTTTCACGTCGA+AGG | 0.526938 | 8_1:-36668755 | None:intergenic |
| ACAGCAGCAGGCTTAGACAC+AGG | 0.527887 | 8_1:-36667976 | None:intergenic |
| GGCGTTGAAGGTAGTCAAGA+AGG | 0.528027 | 8_1:+36666452 | Msa1191830:CDS |
| TCTCCGACTTGATTTAGCTC+GGG | 0.533160 | 8_1:+36669133 | Msa1191830:CDS |
| ATCTTCTGACGAAGAAGATA+AGG | 0.533278 | 8_1:+36667541 | Msa1191830:CDS |
| ATAGCCTCAGTCATATATGA+TGG | 0.537411 | 8_1:+36670406 | Msa1191830:three_prime_UTR |
| AGGGATAGTGGCGGTAGAGG+TGG | 0.538819 | 8_1:+36669911 | Msa1191830:CDS |
| TAAGAATCTTGGAGAGGATG+AGG | 0.539483 | 8_1:+36669333 | Msa1191830:CDS |
| CCAGAACCTTGACTATCTCT+AGG | 0.540562 | 8_1:-36669779 | None:intergenic |
| AGTGGCGGTAGAGGTGGTCG+AGG | 0.540676 | 8_1:+36669917 | Msa1191830:CDS |
| GATGTACGTCTTGCTTCGGA+TGG | 0.542059 | 8_1:+36668897 | Msa1191830:CDS |
| CAAGGTTCTGGTGGTAGAGG+TGG | 0.544275 | 8_1:+36669791 | Msa1191830:CDS |
| AAACACTAACTGAGACAAGT+TGG | 0.545473 | 8_1:-36670584 | None:intergenic |
| CTTTGATATAGGCAAGAGGC+AGG | 0.545783 | 8_1:+36666362 | Msa1191830:intron |
| GCAGGCTGAGGAAGAAGTCA+AGG | 0.547712 | 8_1:+36666380 | Msa1191830:CDS |
| AGAGTCAGATTCCTCTGAAG+TGG | 0.548311 | 8_1:-36666718 | None:intergenic |
| CTGCAAGCTCGGATAGCTGC+AGG | 0.549743 | 8_1:-36670440 | None:intergenic |
| ACAGATCAAGGACGTGGAGA+TGG | 0.552435 | 8_1:+36668536 | Msa1191830:intron |
| AGGAGGTCGATTTGGTGGAA+GGG | 0.553576 | 8_1:+36669892 | Msa1191830:CDS |
| ACCTGTGGCCTCTAAGAAAG+AGG | 0.554114 | 8_1:+36668074 | Msa1191830:CDS |
| TATGAATCTGGTTATTCCAA+GGG | 0.555285 | 8_1:+36669546 | Msa1191830:CDS |
| CTCCTCACTCTCGTCAGAGT+CGG | 0.559018 | 8_1:-36668375 | None:intergenic |
| TTATGAATCTGGTTATTCCA+AGG | 0.559573 | 8_1:+36669545 | Msa1191830:CDS |
| AGATTCCTCAGAGGATTCCT+CGG | 0.560086 | 8_1:-36666487 | None:intergenic |
| TTCTTCATCGGATTCTTCAT+CGG | 0.560281 | 8_1:-36667742 | None:intergenic |
| AGTGAGTGCAAAGAAGCAAA+AGG | 0.568954 | 8_1:+36666404 | Msa1191830:CDS |
| GTCTCAAACAGTATTTGTCA+GGG | 0.570865 | 8_1:+36669303 | Msa1191830:CDS |
| TGTACGTCTTGCTTCGGATG+GGG | 0.571328 | 8_1:+36668899 | Msa1191830:CDS |
| TTTGGTGGAGGTGGAAGAAG+CGG | 0.574689 | 8_1:+36669839 | Msa1191830:CDS |
| CGAGAGTGAGGAGGAGAGTG+AGG | 0.574779 | 8_1:+36668385 | Msa1191830:CDS |
| TGGTTGATGCTGGCAAATCT+GGG | 0.576768 | 8_1:+36668556 | Msa1191830:CDS |
| TTGGTAAAGATCTTGTGTAT+CGG | 0.577757 | 8_1:+36670368 | Msa1191830:three_prime_UTR |
| GGTGGAGGTGGAAGAAGCGG+TGG | 0.578241 | 8_1:+36669842 | Msa1191830:CDS |
| CTTGATTTAGCTCGGGAGAG+GGG | 0.578698 | 8_1:+36669140 | Msa1191830:CDS |
| TTTCACTTCTTCCTCATCGG+AGG | 0.583887 | 8_1:-36666751 | None:intergenic |
| TATAGGCAAGAGGCAGGCTG+AGG | 0.588543 | 8_1:+36666368 | Msa1191830:intron |
| AACTACTCAGCCCAAAGTGG+TGG | 0.591190 | 8_1:+36669271 | Msa1191830:CDS |
| CTAATTCTCTCTCAGCCGCA+GGG | 0.592963 | 8_1:+36665454 | Msa1191830:five_prime_UTR |
| GGCGGTAGAGGTGGTCGAGG+AGG | 0.593185 | 8_1:+36669920 | Msa1191830:CDS |
| TGACAAATACTGTTTGAGAC+TGG | 0.594261 | 8_1:-36669300 | None:intergenic |
| CTTTAGGCATGTGAAAAGAA+GGG | 0.596286 | 8_1:+36670540 | Msa1191830:three_prime_UTR |
| GGAATCCTCTGAGGAATCTG+AGG | 0.596711 | 8_1:+36666491 | Msa1191830:CDS |
| TGTTGAGTTTGCAACTGCAG+AGG | 0.598820 | 8_1:+36668947 | Msa1191830:CDS |
| GGTCTCATTTGGTGTAGCTG+GGG | 0.600709 | 8_1:-36668698 | None:intergenic |
| AAAGAAGCAAAAGGTAGAAG+AGG | 0.600905 | 8_1:+36666413 | Msa1191830:CDS |
| AGAAGATTCAGATGAAGATG+AGG | 0.612685 | 8_1:+36667316 | Msa1191830:CDS |
| TTCCGACTCTGACGAGAGTG+AGG | 0.613333 | 8_1:+36668373 | Msa1191830:CDS |
| GACGTGGAGATGGTTGATGC+TGG | 0.618173 | 8_1:+36668546 | Msa1191830:CDS |
| GTTGAAACAGATCAAGGACG+TGG | 0.624210 | 8_1:+36668530 | Msa1191830:intron |
| GAAGGAGGAAAGTAGTTCCG+AGG | 0.625559 | 8_1:+36666470 | Msa1191830:CDS |
| CCAGCCAGAGACCACTTCAG+AGG | 0.625597 | 8_1:+36666707 | Msa1191830:CDS |
| AGAGATAGTCAAGGTTCTGG+TGG | 0.625604 | 8_1:+36669782 | Msa1191830:CDS |
| GGTGGTCGAGGAGGAAGAGG+TGG | 0.627115 | 8_1:+36669929 | Msa1191830:CDS |
| GAGTGATTCGTCTGATGACG+AGG | 0.627287 | 8_1:+36668110 | Msa1191830:CDS |
| AAAACTGCCACCCTAGTCGT+CGG | 0.640972 | 8_1:-36670240 | None:intergenic |
| GGAGGAAGAGGTGGTCGTGG+AGG | 0.644972 | 8_1:+36669938 | Msa1191830:CDS |
| TTGACTTTGATATAGGCAAG+AGG | 0.646540 | 8_1:+36666358 | Msa1191830:intron |
| CGACTCTGACGAGAGTGAGG+AGG | 0.647070 | 8_1:+36668376 | Msa1191830:CDS |
| TCTCAAACAGTATTTGTCAG+GGG | 0.650987 | 8_1:+36669304 | Msa1191830:CDS |
| ATGAATCTGGTTATTCCAAG+GGG | 0.651208 | 8_1:+36669547 | Msa1191830:CDS |
| TGATGACATCTCCTCCGATG+AGG | 0.652623 | 8_1:+36666740 | Msa1191830:CDS |
| TGATGGTTATCAGTTGTCAG+TGG | 0.655450 | 8_1:+36669745 | Msa1191830:CDS |
| TACTTGTGGGGAACCTACAA+GGG | 0.657423 | 8_1:+36669506 | Msa1191830:CDS |
| AACAGTTATATGATTCAACT+CGG | 0.665142 | 8_1:-36670478 | None:intergenic |
| GCCAAACCTAGAGATAGTCA+AGG | 0.670318 | 8_1:+36669773 | Msa1191830:CDS |
| ATATCCATCATATATGACTG+AGG | 0.675810 | 8_1:-36670410 | None:intergenic |
| TCTCCCGAGCTAAATCAAGT+CGG | 0.679997 | 8_1:-36669136 | None:intergenic |
| GTTGAAGGTAGTCAAGAAGG+AGG | 0.683060 | 8_1:+36666455 | Msa1191830:CDS |
| CTCATCCTCAGATTCCTCAG+AGG | 0.686828 | 8_1:-36666496 | None:intergenic |
| TGATGAAGATAAGAAACCTG+TGG | 0.691109 | 8_1:+36668059 | Msa1191830:CDS |
| GGATAAGATGAATATTGACA+AGG | 0.692392 | 8_1:+36668346 | Msa1191830:intron |
| TTTCTTCCAAGGTTGCGGAG+AGG | 0.694587 | 8_1:+36668869 | Msa1191830:CDS |
| AGTAACTACTCAGCCCAAAG+TGG | 0.695978 | 8_1:+36669268 | Msa1191830:intron |
| TTTGGTGGAAGGGATAGTGG+CGG | 0.720960 | 8_1:+36669902 | Msa1191830:CDS |
| TAGTTCCGAGGAATCCTCTG+AGG | 0.721411 | 8_1:+36666482 | Msa1191830:CDS |
| GCTACACCAAATGAGACCAG+TGG | 0.725457 | 8_1:+36668703 | Msa1191830:CDS |
| GGAAGCTATTCAAAACCCTG+CGG | 0.794539 | 8_1:-36665469 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATACAATGATATAAAATTAA+GGG | - | chr8_1:36667379-36667398 | None:intergenic | 10.0% |
| !! | AATACAATGATATAAAATTA+AGG | - | chr8_1:36667380-36667399 | None:intergenic | 10.0% |
| !! | CATGAAAAAAAAATTAAAAA+AGG | - | chr8_1:36667432-36667451 | None:intergenic | 10.0% |
| !!! | CTTTTTTAATTTTTTTTTCA+TGG | + | chr8_1:36667430-36667449 | Msa1191830:intron | 10.0% |
| !! | GGAAAAAATATATATTTAAT+GGG | - | chr8_1:36667652-36667671 | None:intergenic | 10.0% |
| !! | AGGAAAAAATATATATTTAA+TGG | - | chr8_1:36667653-36667672 | None:intergenic | 10.0% |
| !!! | TTAAATATATATTTTTTCCT+TGG | + | chr8_1:36667653-36667672 | Msa1191830:intron | 10.0% |
| !! | TTTATATTTCATTTCAATAT+AGG | - | chr8_1:36668215-36668234 | None:intergenic | 10.0% |
| !!! | TTTTGATTTTAATTTTAGTT+TGG | + | chr8_1:36668468-36668487 | Msa1191830:intron | 10.0% |
| !!! | TTTTTTTTTTTTTTTTGTAC+TGG | + | chr8_1:36668622-36668641 | Msa1191830:intron | 10.0% |
| !! | GTATCAAAAAATATATTAAT+TGG | - | chr8_1:36670037-36670056 | None:intergenic | 10.0% |
| !!! | ATTTTATTTGATTTGATTCA+TGG | + | chr8_1:36665778-36665797 | Msa1191830:intron | 15.0% |
| !!! | TTTTATTTGATTTGATTCAT+GGG | + | chr8_1:36665779-36665798 | Msa1191830:intron | 15.0% |
| !!! | GATGTTATTAATTTTTTACT+TGG | + | chr8_1:36665815-36665834 | Msa1191830:intron | 15.0% |
| !!! | ATTTTATTGTTTTTGATTCA+TGG | + | chr8_1:36665848-36665867 | Msa1191830:intron | 15.0% |
| !!! | TTTTATTGTTTTTGATTCAT+GGG | + | chr8_1:36665849-36665868 | Msa1191830:intron | 15.0% |
| !!! | AACAATATCTTTAAAAAACT+CGG | - | chr8_1:36665939-36665958 | None:intergenic | 15.0% |
| !!! | ATGTTTAAGATATTAATCAA+AGG | - | chr8_1:36666827-36666846 | None:intergenic | 15.0% |
| !! | AAAAAAAAGTGAATTATAGA+GGG | - | chr8_1:36666942-36666961 | None:intergenic | 15.0% |
| !! | TAAAAAAAAGTGAATTATAG+AGG | - | chr8_1:36666943-36666962 | None:intergenic | 15.0% |
| !!! | TGTATTTACAATTTTTTGTT+TGG | + | chr8_1:36667394-36667413 | Msa1191830:intron | 15.0% |
| !! | ATTGAAATGAAATATAAACA+TGG | + | chr8_1:36668217-36668236 | Msa1191830:intron | 15.0% |
| !! | AGTAATTACCTATTATTATT+AGG | - | chr8_1:36669176-36669195 | None:intergenic | 15.0% |
| !!! | TTTTATATACGAAAAGAAAG+GGG | - | chr8_1:36665377-36665396 | None:intergenic | 20.0% |
| !!! | GTTTTATATACGAAAAGAAA+GGG | - | chr8_1:36665378-36665397 | None:intergenic | 20.0% |
| !! | ATCAATCTCTTGTTAATTTA+AGG | + | chr8_1:36665578-36665597 | Msa1191830:intron | 20.0% |
| !!! | TTTGTTTTTGATTTGTTTGT+AGG | + | chr8_1:36665639-36665658 | Msa1191830:intron | 20.0% |
| !!! | TCAAATAAAATTGGAGTTTT+TGG | - | chr8_1:36666212-36666231 | None:intergenic | 20.0% |
| !! | ATCAGAACATCAAATAAAAT+TGG | - | chr8_1:36666221-36666240 | None:intergenic | 20.0% |
| !!! | AAAGTGATTTTTTTTTTCTC+TGG | + | chr8_1:36666293-36666312 | Msa1191830:intron | 20.0% |
| !! | CAATAAAAAAAAAACGACAT+CGG | - | chr8_1:36666332-36666351 | None:intergenic | 20.0% |
| !!! | GTTTTAAAGAAAAGAACAAT+AGG | - | chr8_1:36666918-36666937 | None:intergenic | 20.0% |
| !! | ATATCATGCTATAAACTAAA+GGG | - | chr8_1:36667126-36667145 | None:intergenic | 20.0% |
| !! | TATATCATGCTATAAACTAA+AGG | - | chr8_1:36667127-36667146 | None:intergenic | 20.0% |
| !!! | TTGTTCTAGCTATAAATTAA+AGG | - | chr8_1:36667150-36667169 | None:intergenic | 20.0% |
| !! | TGATAAACAAAACAAAAAGT+TGG | - | chr8_1:36667180-36667199 | None:intergenic | 20.0% |
| !! | TAAAAAACATGAGTTATAGA+GGG | - | chr8_1:36667208-36667227 | None:intergenic | 20.0% |
| !! | ATAAAAAACATGAGTTATAG+AGG | - | chr8_1:36667209-36667228 | None:intergenic | 20.0% |
| !!! | TCTATAACTCATGTTTTTTA+TGG | + | chr8_1:36667208-36667227 | Msa1191830:intron | 20.0% |
| !! | AGATGTGACATTTAAATATA+TGG | - | chr8_1:36667820-36667839 | None:intergenic | 20.0% |
| !! | ATGAAATATAAACATGGTAA+TGG | + | chr8_1:36668223-36668242 | Msa1191830:intron | 20.0% |
| !!! | TTATTGTGTTATTGATACAA+TGG | + | chr8_1:36668305-36668324 | Msa1191830:intron | 20.0% |
| !!! | TATTGTGTTATTGATACAAT+GGG | + | chr8_1:36668306-36668325 | Msa1191830:intron | 20.0% |
| !! | TTGTTTGCATGTTTAATAAT+AGG | + | chr8_1:36669073-36669092 | Msa1191830:intron | 20.0% |
| !! | CATTTACTCCTAATAATAAT+AGG | + | chr8_1:36669165-36669184 | Msa1191830:CDS | 20.0% |
| !! | AAAATACATAACAGAATAAG+AGG | - | chr8_1:36669451-36669470 | None:intergenic | 20.0% |
| !!! | AATATTTTTTACTTCAGTTC+TGG | + | chr8_1:36670159-36670178 | Msa1191830:intron | 20.0% |
| !!! | TTGGTAATTTTAGTAAGAAT+TGG | + | chr8_1:36670349-36670368 | Msa1191830:three_prime_UTR | 20.0% |
| !! | ACATTTACTAGTATAACTTT+AGG | + | chr8_1:36670524-36670543 | Msa1191830:three_prime_UTR | 20.0% |
| !!! | GGTTTTATATACGAAAAGAA+AGG | - | chr8_1:36665379-36665398 | None:intergenic | 25.0% |
| !! | TTGATGAAAAAAGCATACTT+TGG | - | chr8_1:36665563-36665582 | None:intergenic | 25.0% |
| ! | CAATGGACAGAAAAAATAAT+TGG | - | chr8_1:36666017-36666036 | None:intergenic | 25.0% |
| !!! | ATTATTTTTTCTGTCCATTG+AGG | + | chr8_1:36666017-36666036 | Msa1191830:intron | 25.0% |
| ! | AAATCATATAAATGCCTCAA+TGG | - | chr8_1:36666034-36666053 | None:intergenic | 25.0% |
| ! | TTGATTTATGCTATGAAGTT+AGG | + | chr8_1:36666053-36666072 | Msa1191830:intron | 25.0% |
| ! | ATGTTAATATAGCTGTTGAT+TGG | + | chr8_1:36666097-36666116 | Msa1191830:intron | 25.0% |
| !!! | TTGGAGTTTTTGGTAAAAAT+CGG | - | chr8_1:36666202-36666221 | None:intergenic | 25.0% |
| !! | ATGCTTTAATGCATTTTGAA+TGG | + | chr8_1:36666538-36666557 | Msa1191830:intron | 25.0% |
| !! | TATGTCATGTTAATTTTACG+TGG | + | chr8_1:36666610-36666629 | Msa1191830:intron | 25.0% |
| ! | TTATATCATAAACACTGTGT+TGG | + | chr8_1:36666889-36666908 | Msa1191830:intron | 25.0% |
| ! | AGATTCATCATCTTTCTTTA+CGG | - | chr8_1:36667017-36667036 | None:intergenic | 25.0% |
| !!! | ACATTTTGAAGTTTATTGCA+TGG | + | chr8_1:36667092-36667111 | Msa1191830:intron | 25.0% |
| ! | AAATCATACAACCATATGAA+AGG | - | chr8_1:36667793-36667812 | None:intergenic | 25.0% |
| ! | TAAATATACTTGTAGTAGCA+TGG | + | chr8_1:36668253-36668272 | Msa1191830:intron | 25.0% |
| ! | TACTGCAATAACACAATAAA+TGG | - | chr8_1:36669252-36669271 | None:intergenic | 25.0% |
| ! | AGCAGAAATAATAAACATGA+GGG | - | chr8_1:36669403-36669422 | None:intergenic | 25.0% |
| ! | AAGCAGAAATAATAAACATG+AGG | - | chr8_1:36669404-36669423 | None:intergenic | 25.0% |
| ! | AACCAGATTCATAATCTTTA+GGG | - | chr8_1:36669539-36669558 | None:intergenic | 25.0% |
| ! | TAACCAGATTCATAATCTTT+AGG | - | chr8_1:36669540-36669559 | None:intergenic | 25.0% |
| !!! | CTTTTTTGTTAAAGAGGAAA+AGG | - | chr8_1:36670001-36670020 | None:intergenic | 25.0% |
| !!! | AACACTCTTTTTTGTTAAAG+AGG | - | chr8_1:36670007-36670026 | None:intergenic | 25.0% |
| !! | GATACAGCTTTTCAATTAAA+AGG | + | chr8_1:36670052-36670071 | Msa1191830:intron | 25.0% |
| ! | GTATTCATTCTAACAATGTA+TGG | - | chr8_1:36670126-36670145 | None:intergenic | 25.0% |
| ! | ACATTGTTAGAATGAATACA+TGG | + | chr8_1:36670127-36670146 | Msa1191830:intron | 25.0% |
| ! | GAAGTAAAAAATATTGCAAG+CGG | - | chr8_1:36670154-36670173 | None:intergenic | 25.0% |
| !! | AAACAACTTATCTTCCATTT+TGG | + | chr8_1:36670264-36670283 | Msa1191830:three_prime_UTR | 25.0% |
| !! | AACAACTTATCTTCCATTTT+GGG | + | chr8_1:36670265-36670284 | Msa1191830:three_prime_UTR | 25.0% |
| ! | AACAGTTATATGATTCAACT+CGG | - | chr8_1:36670481-36670500 | None:intergenic | 25.0% |
| AAAGGAAGAATGAGAAATTG+GGG | - | chr8_1:36665503-36665522 | None:intergenic | 30.0% | |
| GAAAGGAAGAATGAGAAATT+GGG | - | chr8_1:36665504-36665523 | None:intergenic | 30.0% | |
| AGAAAGGAAGAATGAGAAAT+TGG | - | chr8_1:36665505-36665524 | None:intergenic | 30.0% | |
| TTTAGGCATAATGAACAGAA+AGG | - | chr8_1:36665521-36665540 | None:intergenic | 30.0% | |
| ! | AAAAAAGCATACTTTGGTAG+CGG | - | chr8_1:36665557-36665576 | None:intergenic | 30.0% |
| AAATCGAAGCAGAAAAGTAA+AGG | - | chr8_1:36665719-36665738 | None:intergenic | 30.0% | |
| !!! | GACCATTTTGACTTTGATAT+AGG | + | chr8_1:36666351-36666370 | Msa1191830:intron | 30.0% |
| TGCCTATATCAAAGTCAAAA+TGG | - | chr8_1:36666356-36666375 | None:intergenic | 30.0% | |
| AAAGCTGTTCCATCTAAAAA+TGG | + | chr8_1:36666983-36667002 | Msa1191830:intron | 30.0% | |
| AAGCTGTTCCATCTAAAAAT+GGG | + | chr8_1:36666984-36667003 | Msa1191830:intron | 30.0% | |
| GATTCATCATCTTTCTTTAC+GGG | - | chr8_1:36667016-36667035 | None:intergenic | 30.0% | |
| ! | AAAGCTGTTCCTTCTAAAAA+TGG | + | chr8_1:36667248-36667267 | Msa1191830:CDS | 30.0% |
| ! | AAGCTGTTCCTTCTAAAAAT+GGG | + | chr8_1:36667249-36667268 | Msa1191830:CDS | 30.0% |
| !! | TTAAGGGTATTATCATCATG+CGG | - | chr8_1:36667363-36667382 | None:intergenic | 30.0% |
| !! | AAAGCTGTTTCTTCCAAAAA+TGG | + | chr8_1:36667470-36667489 | Msa1191830:CDS | 30.0% |
| !! | AAGCTGTTTCTTCCAAAAAT+GGG | + | chr8_1:36667471-36667490 | Msa1191830:CDS | 30.0% |
| AGAACTATCATCTTTCTTTG+CGG | - | chr8_1:36667504-36667523 | None:intergenic | 30.0% | |
| TTAACTCACTTCATCTTCAT+CGG | - | chr8_1:36667769-36667788 | None:intergenic | 30.0% | |
| AGTGAGTTAAACCTTTCATA+TGG | + | chr8_1:36667779-36667798 | Msa1191830:intron | 30.0% | |
| TATGCTACCTTTCTACTAAA+GGG | + | chr8_1:36667839-36667858 | Msa1191830:intron | 30.0% | |
| TAAGAAAGAGGTTAGTGAAT+CGG | + | chr8_1:36668086-36668105 | Msa1191830:CDS | 30.0% | |
| !!! | ATGCTACTACATTTTTTGTG+AGG | - | chr8_1:36668189-36668208 | None:intergenic | 30.0% |
| GGATAAGATGAATATTGACA+AGG | + | chr8_1:36668346-36668365 | Msa1191830:intron | 30.0% | |
| !!! | TTTTTCTGAGGTGTTATCAA+TGG | - | chr8_1:36668416-36668435 | None:intergenic | 30.0% |
| ! | ATTGATAACACCTCAGAAAA+AGG | + | chr8_1:36668415-36668434 | Msa1191830:CDS | 30.0% |
| GATCTGTTTCAACATGAATA+TGG | - | chr8_1:36668523-36668542 | None:intergenic | 30.0% | |
| ATTCATGTTGAAACAGATCA+AGG | + | chr8_1:36668524-36668543 | Msa1191830:intron | 30.0% | |
| ACTGGAGATAATTTAAGTCA+AGG | + | chr8_1:36668640-36668659 | Msa1191830:intron | 30.0% | |
| GCTCAAAGACATTATTTGTT+GGG | + | chr8_1:36668725-36668744 | Msa1191830:CDS | 30.0% | |
| ! | TTTCTCACTCATGTGATTTT+TGG | + | chr8_1:36668789-36668808 | Msa1191830:intron | 30.0% |
| TTCAGAGAAAATTTCTTCCA+AGG | + | chr8_1:36668858-36668877 | Msa1191830:intron | 30.0% | |
| ATGCTAATAGCTTACACTTT+GGG | - | chr8_1:36668976-36668995 | None:intergenic | 30.0% | |
| AAATGGAATCAAAACATGTG+AGG | - | chr8_1:36669235-36669254 | None:intergenic | 30.0% | |
| ! | TTTTGATAAGAATCTTGGAG+AGG | + | chr8_1:36669327-36669346 | Msa1191830:CDS | 30.0% |
| TCAGATAAGAGCTAAATTGA+TGG | + | chr8_1:36669470-36669489 | Msa1191830:intron | 30.0% | |
| ATCCCTAAAGATTATGAATC+TGG | + | chr8_1:36669534-36669553 | Msa1191830:CDS | 30.0% | |
| TTATGAATCTGGTTATTCCA+AGG | + | chr8_1:36669545-36669564 | Msa1191830:CDS | 30.0% | |
| TATGAATCTGGTTATTCCAA+GGG | + | chr8_1:36669546-36669565 | Msa1191830:CDS | 30.0% | |
| ! | AAAGTTTTCAATGCAGCATT+AGG | - | chr8_1:36669603-36669622 | None:intergenic | 30.0% |
| TTACTTCATGTATTGTTCAC+AGG | + | chr8_1:36669654-36669673 | Msa1191830:intron | 30.0% | |
| !!! | TTGAACTTTTTGCCATTTTC+AGG | + | chr8_1:36670200-36670219 | Msa1191830:intron | 30.0% |
| !!! | TGAACTTTTTGCCATTTTCA+GGG | + | chr8_1:36670201-36670220 | Msa1191830:intron | 30.0% |
| ! | AAGTTTTCAGTATCCCAAAA+TGG | - | chr8_1:36670281-36670300 | None:intergenic | 30.0% |
| !!! | TTAGTTTTGTTGCTCAGTTT+TGG | + | chr8_1:36670330-36670349 | Msa1191830:three_prime_UTR | 30.0% |
| TTGGTAAAGATCTTGTGTAT+CGG | + | chr8_1:36670368-36670387 | Msa1191830:three_prime_UTR | 30.0% | |
| ATATCCATCATATATGACTG+AGG | - | chr8_1:36670413-36670432 | None:intergenic | 30.0% | |
| !! | CAGTCATATATGATGGATAT+TGG | + | chr8_1:36670413-36670432 | Msa1191830:three_prime_UTR | 30.0% |
| ATACGAAAAGAAAGGGGTTA+GGG | - | chr8_1:36665371-36665390 | None:intergenic | 35.0% | |
| TATACGAAAAGAAAGGGGTT+AGG | - | chr8_1:36665372-36665391 | None:intergenic | 35.0% | |
| AAGGAAGAATGAGAAATTGG+GGG | - | chr8_1:36665502-36665521 | None:intergenic | 35.0% | |
| TTGACTTTGATATAGGCAAG+AGG | + | chr8_1:36666358-36666377 | Msa1191830:intron | 35.0% | |
| AAAGAAGCAAAAGGTAGAAG+AGG | + | chr8_1:36666413-36666432 | Msa1191830:CDS | 35.0% | |
| !!! | TCACATTCCCATTTTTAGCT+GGG | - | chr8_1:36666680-36666699 | None:intergenic | 35.0% |
| !!! | TTCACATTCCCATTTTTAGC+TGG | - | chr8_1:36666681-36666700 | None:intergenic | 35.0% |
| TGAATCTTCTGATGAAGACA+AGG | + | chr8_1:36667063-36667082 | Msa1191830:intron | 35.0% | |
| GAAGAATCATCTTTCTTTGC+AGG | - | chr8_1:36667281-36667300 | None:intergenic | 35.0% | |
| AGAAGATTCAGATGAAGATG+AGG | + | chr8_1:36667316-36667335 | Msa1191830:CDS | 35.0% | |
| TTCAGATGAAGATGAGGTAT+TGG | + | chr8_1:36667322-36667341 | Msa1191830:intron | 35.0% | |
| ATCTTCTGACGAAGAAGATA+AGG | + | chr8_1:36667541-36667560 | Msa1191830:CDS | 35.0% | |
| TGACGAAGAAGATAAGGTAT+TGG | + | chr8_1:36667547-36667566 | Msa1191830:intron | 35.0% | |
| !! | ACTCACATTTTTAGAGGCTT+TGG | - | chr8_1:36667694-36667713 | None:intergenic | 35.0% |
| TTCTTCATCGGATTCTTCAT+CGG | - | chr8_1:36667745-36667764 | None:intergenic | 35.0% | |
| ATCTTCATCGGATTCTTCAT+CGG | - | chr8_1:36667757-36667776 | None:intergenic | 35.0% | |
| CTATGCTACCTTTCTACTAA+AGG | + | chr8_1:36667838-36667857 | Msa1191830:intron | 35.0% | |
| CTTCTAACCCTTTAGTAGAA+AGG | - | chr8_1:36667849-36667868 | None:intergenic | 35.0% | |
| TGATGAAGATAAGAAACCTG+TGG | + | chr8_1:36668059-36668078 | Msa1191830:CDS | 35.0% | |
| TTCACTAACCTCTTTCTTAG+AGG | - | chr8_1:36668085-36668104 | None:intergenic | 35.0% | |
| ! | TATATGCTGACCTTTTTCTG+AGG | - | chr8_1:36668428-36668447 | None:intergenic | 35.0% |
| AAATAATGTCTTTGAGCCAC+TGG | - | chr8_1:36668722-36668741 | None:intergenic | 35.0% | |
| GGCTCAAAGACATTATTTGT+TGG | + | chr8_1:36668724-36668743 | Msa1191830:CDS | 35.0% | |
| GAAAATTTCTTCCAAGGTTG+CGG | + | chr8_1:36668864-36668883 | Msa1191830:CDS | 35.0% | |
| ! | GATGGAGTATTTAAAGGCTT+TGG | + | chr8_1:36668921-36668940 | Msa1191830:CDS | 35.0% |
| GATGCTAATAGCTTACACTT+TGG | - | chr8_1:36668977-36668996 | None:intergenic | 35.0% | |
| !! | ACTTCCAACTGATTTGTTTC+TGG | + | chr8_1:36669023-36669042 | Msa1191830:intron | 35.0% |
| GATTCCAGAAACAAATCAGT+TGG | - | chr8_1:36669030-36669049 | None:intergenic | 35.0% | |
| TAATAGGCACTTGAGATGAA+TGG | + | chr8_1:36669089-36669108 | Msa1191830:intron | 35.0% | |
| ! | TGACAAATACTGTTTGAGAC+TGG | - | chr8_1:36669303-36669322 | None:intergenic | 35.0% |
| AGTCTCAAACAGTATTTGTC+AGG | + | chr8_1:36669302-36669321 | Msa1191830:CDS | 35.0% | |
| GTCTCAAACAGTATTTGTCA+GGG | + | chr8_1:36669303-36669322 | Msa1191830:CDS | 35.0% | |
| TCTCAAACAGTATTTGTCAG+GGG | + | chr8_1:36669304-36669323 | Msa1191830:CDS | 35.0% | |
| !! | AGGGGTTTTGATAAGAATCT+TGG | + | chr8_1:36669322-36669341 | Msa1191830:CDS | 35.0% |
| ! | CATAACAGAATAAGAGGTGT+TGG | - | chr8_1:36669445-36669464 | None:intergenic | 35.0% |
| !! | GCTAAATTGATGGAGCATTT+TGG | + | chr8_1:36669480-36669499 | Msa1191830:CDS | 35.0% |
| !! | AAATTGATGGAGCATTTTGG+TGG | + | chr8_1:36669483-36669502 | Msa1191830:CDS | 35.0% |
| ATGAATCTGGTTATTCCAAG+GGG | + | chr8_1:36669547-36669566 | Msa1191830:CDS | 35.0% | |
| CTTCATGAAAGTGAACTTGA+TGG | + | chr8_1:36669728-36669747 | Msa1191830:CDS | 35.0% | |
| ! | GTAGTCTTTTTCCCTGAAAA+TGG | - | chr8_1:36670215-36670234 | None:intergenic | 35.0% |
| ATAGCCTCAGTCATATATGA+TGG | + | chr8_1:36670406-36670425 | Msa1191830:three_prime_UTR | 35.0% | |
| ACTTTAGGCATGTGAAAAGA+AGG | + | chr8_1:36670539-36670558 | Msa1191830:three_prime_UTR | 35.0% | |
| CTTTAGGCATGTGAAAAGAA+GGG | + | chr8_1:36670540-36670559 | Msa1191830:three_prime_UTR | 35.0% | |
| AAACACTAACTGAGACAAGT+TGG | - | chr8_1:36670587-36670606 | None:intergenic | 35.0% | |
| ! | CAGTTAGTGTTTTCTGACTA+AGG | + | chr8_1:36670595-36670614 | Msa1191830:three_prime_UTR | 35.0% |
| ! | AAGAAAGGGGTTAGGGTTTT+GGG | - | chr8_1:36665364-36665383 | None:intergenic | 40.0% |
| ! | AAAGAAAGGGGTTAGGGTTT+TGG | - | chr8_1:36665365-36665384 | None:intergenic | 40.0% |
| GGAATTGTGAGAAGAGAGTT+AGG | - | chr8_1:36665400-36665419 | None:intergenic | 40.0% | |
| ! | CTGAGAGAGAATTAGGGTTT+TGG | - | chr8_1:36665449-36665468 | None:intergenic | 40.0% |
| GCGGATTTCTTGCTTGATTT+AGG | - | chr8_1:36665538-36665557 | None:intergenic | 40.0% | |
| TTCACTGGAGAAACAACAAC+AGG | - | chr8_1:36665676-36665695 | None:intergenic | 40.0% | |
| TCGAAGCAGAAAAGTAAAGG+TGG | - | chr8_1:36665716-36665735 | None:intergenic | 40.0% | |
| ! | CTGTTGATTGGTCAAACTGA+TGG | + | chr8_1:36666109-36666128 | Msa1191830:intron | 40.0% |
| AGTGAGTGCAAAGAAGCAAA+AGG | + | chr8_1:36666404-36666423 | Msa1191830:CDS | 40.0% | |
| AAGAAGACCCCAGCTAAAAA+TGG | + | chr8_1:36666669-36666688 | Msa1191830:CDS | 40.0% | |
| AGAAGACCCCAGCTAAAAAT+GGG | + | chr8_1:36666670-36666689 | Msa1191830:CDS | 40.0% | |
| !!! | CACATTCCCATTTTTAGCTG+GGG | - | chr8_1:36666679-36666698 | None:intergenic | 40.0% |
| CACTTTCACTTCTTCCTCAT+CGG | - | chr8_1:36666757-36666776 | None:intergenic | 40.0% | |
| GAACTTGCAGCTTTCTTTGT+GGG | - | chr8_1:36667720-36667739 | None:intergenic | 40.0% | |
| AGAACTTGCAGCTTTCTTTG+TGG | - | chr8_1:36667721-36667740 | None:intergenic | 40.0% | |
| TAACTTATGCCCCACTGTAT+AGG | + | chr8_1:36667945-36667964 | Msa1191830:intron | 40.0% | |
| CTACAATTGTAGTAGCACGT+AGG | + | chr8_1:36668162-36668181 | Msa1191830:intron | 40.0% | |
| TGTTGATGTACGTCTTGCTT+CGG | + | chr8_1:36668893-36668912 | Msa1191830:CDS | 40.0% | |
| ! | GATGGGGATGGAGTATTTAA+AGG | + | chr8_1:36668915-36668934 | Msa1191830:CDS | 40.0% |
| TAAGAATCTTGGAGAGGATG+AGG | + | chr8_1:36669333-36669352 | Msa1191830:CDS | 40.0% | |
| !! | TGATTTTATTTCCCCCCCTT+TGG | + | chr8_1:36669356-36669375 | Msa1191830:intron | 40.0% |
| ATCATTCTGCATGAGCCAAA+GGG | - | chr8_1:36669374-36669393 | None:intergenic | 40.0% | |
| AATCATTCTGCATGAGCCAA+AGG | - | chr8_1:36669375-36669394 | None:intergenic | 40.0% | |
| !! | AGCATTTTGGTGGTACTTGT+GGG | + | chr8_1:36669493-36669512 | Msa1191830:CDS | 40.0% |
| TTGCAAAGAAACATACCCCT+TGG | - | chr8_1:36669565-36669584 | None:intergenic | 40.0% | |
| ! | AACTGTGAACAGTCTGAAGT+AGG | - | chr8_1:36669627-36669646 | None:intergenic | 40.0% |
| TGTTCACAGGTTTGCATACA+TGG | + | chr8_1:36669667-36669686 | Msa1191830:intron | 40.0% | |
| TGATGGTTATCAGTTGTCAG+TGG | + | chr8_1:36669745-36669764 | Msa1191830:CDS | 40.0% | |
| ACCTTGACTATCTCTAGGTT+TGG | - | chr8_1:36669777-36669796 | None:intergenic | 40.0% | |
| AAACCAAGCTTTGCTTCTGA+AGG | + | chr8_1:36669968-36669987 | Msa1191830:CDS | 40.0% | |
| ATACCTTCAGAAGCAAAGCT+TGG | - | chr8_1:36669974-36669993 | None:intergenic | 40.0% | |
| TAACCAAACATCTGCAAGCT+CGG | - | chr8_1:36670454-36670473 | None:intergenic | 40.0% | |
| GGAAGCTATTCAAAACCCTG+CGG | - | chr8_1:36665472-36665491 | None:intergenic | 45.0% | |
| GAATGAGAAATTGGGGGATG+CGG | - | chr8_1:36665496-36665515 | None:intergenic | 45.0% | |
| !! | GTTGTTTCTCCAGTGAAGTC+TGG | + | chr8_1:36665679-36665698 | Msa1191830:CDS | 45.0% |
| CCTTTCTTTCCAGACTTCAC+TGG | - | chr8_1:36665691-36665710 | None:intergenic | 45.0% | |
| CCAGTGAAGTCTGGAAAGAA+AGG | + | chr8_1:36665688-36665707 | Msa1191830:CDS | 45.0% | |
| CTTTGATATAGGCAAGAGGC+AGG | + | chr8_1:36666362-36666381 | Msa1191830:intron | 45.0% | |
| ! | TACCTTCAACGCCTTTTGCT+TGG | - | chr8_1:36666445-36666464 | None:intergenic | 45.0% |
| GTTGAAGGTAGTCAAGAAGG+AGG | + | chr8_1:36666455-36666474 | Msa1191830:CDS | 45.0% | |
| AGATTCCTCAGAGGATTCCT+CGG | - | chr8_1:36666490-36666509 | None:intergenic | 45.0% | |
| TTAGCTGGGGTCTTCTTTGA+AGG | - | chr8_1:36666666-36666685 | None:intergenic | 45.0% | |
| ! | AGAGTCAGATTCCTCTGAAG+TGG | - | chr8_1:36666721-36666740 | None:intergenic | 45.0% |
| TTTCACTTCTTCCTCATCGG+AGG | - | chr8_1:36666754-36666773 | None:intergenic | 45.0% | |
| ! | AGATGGAACAGCTTTAGCTG+CGG | - | chr8_1:36666978-36666997 | None:intergenic | 45.0% |
| !! | GGTGCACTCCCATTTTTAGA+TGG | - | chr8_1:36666995-36667014 | None:intergenic | 45.0% |
| !! | GGTGCACTCCCATTTTTAGA+AGG | - | chr8_1:36666995-36667014 | None:intergenic | 45.0% |
| ! | GAAGAAACAGCTTTTGCTGC+AGG | - | chr8_1:36667464-36667483 | None:intergenic | 45.0% |
| ! | TGCGGATACACTCCCATTTT+TGG | - | chr8_1:36667486-36667505 | None:intergenic | 45.0% |
| !! | TTTTTAGAGGCTTTGGCTGC+AGG | - | chr8_1:36667687-36667706 | None:intergenic | 45.0% |
| !! | GGGTGCACTCACATTTTTAG+AGG | - | chr8_1:36667700-36667719 | None:intergenic | 45.0% |
| GCTTTGCATCCTATACAGTG+GGG | - | chr8_1:36667957-36667976 | None:intergenic | 45.0% | |
| GGCTTTGCATCCTATACAGT+GGG | - | chr8_1:36667958-36667977 | None:intergenic | 45.0% | |
| AGGCTTTGCATCCTATACAG+TGG | - | chr8_1:36667959-36667978 | None:intergenic | 45.0% | |
| !!! | CTCTTTTTTGCAACAGCAGC+AGG | - | chr8_1:36667991-36668010 | None:intergenic | 45.0% |
| TGGGAATATGCGTCAATGAC+AGG | + | chr8_1:36668325-36668344 | Msa1191830:intron | 45.0% | |
| GTTGAAACAGATCAAGGACG+TGG | + | chr8_1:36668530-36668549 | Msa1191830:intron | 45.0% | |
| ! | ATGGTTGATGCTGGCAAATC+TGG | + | chr8_1:36668555-36668574 | Msa1191830:CDS | 45.0% |
| ! | TGGTTGATGCTGGCAAATCT+GGG | + | chr8_1:36668556-36668575 | Msa1191830:CDS | 45.0% |
| ! | TTTGGTGTAGCTGGGGTATT+AGG | - | chr8_1:36668694-36668713 | None:intergenic | 45.0% |
| !! | TGGTCTCATTTGGTGTAGCT+GGG | - | chr8_1:36668702-36668721 | None:intergenic | 45.0% |
| ! | TTTGAGCCACTGGTCTCATT+TGG | - | chr8_1:36668712-36668731 | None:intergenic | 45.0% |
| ATGTACGTCTTGCTTCGGAT+GGG | + | chr8_1:36668898-36668917 | Msa1191830:CDS | 45.0% | |
| TGTTGAGTTTGCAACTGCAG+AGG | + | chr8_1:36668947-36668966 | Msa1191830:CDS | 45.0% | |
| ! | CTCTCCGACTTGATTTAGCT+CGG | + | chr8_1:36669132-36669151 | Msa1191830:CDS | 45.0% |
| ! | TCTCCGACTTGATTTAGCTC+GGG | + | chr8_1:36669133-36669152 | Msa1191830:CDS | 45.0% |
| TCTCCCGAGCTAAATCAAGT+CGG | - | chr8_1:36669139-36669158 | None:intergenic | 45.0% | |
| ! | ACTTGATTTAGCTCGGGAGA+GGG | + | chr8_1:36669139-36669158 | Msa1191830:CDS | 45.0% |
| AGTAACTACTCAGCCCAAAG+TGG | + | chr8_1:36669268-36669287 | Msa1191830:intron | 45.0% | |
| TCATTCTGCATGAGCCAAAG+GGG | - | chr8_1:36669373-36669392 | None:intergenic | 45.0% | |
| !! | GAGCATTTTGGTGGTACTTG+TGG | + | chr8_1:36669492-36669511 | Msa1191830:CDS | 45.0% |
| !! | GCATTTTGGTGGTACTTGTG+GGG | + | chr8_1:36669494-36669513 | Msa1191830:CDS | 45.0% |
| TACTTGTGGGGAACCTACAA+GGG | + | chr8_1:36669506-36669525 | Msa1191830:CDS | 45.0% | |
| TTAGGGATTGACACCCTTGT+AGG | - | chr8_1:36669522-36669541 | None:intergenic | 45.0% | |
| GCCAAACCTAGAGATAGTCA+AGG | + | chr8_1:36669773-36669792 | Msa1191830:CDS | 45.0% | |
| CCAGAACCTTGACTATCTCT+AGG | - | chr8_1:36669782-36669801 | None:intergenic | 45.0% | |
| CCTAGAGATAGTCAAGGTTC+TGG | + | chr8_1:36669779-36669798 | Msa1191830:CDS | 45.0% | |
| ! | AGAGATAGTCAAGGTTCTGG+TGG | + | chr8_1:36669782-36669801 | Msa1191830:CDS | 45.0% |
| !! | ACTACTTTTGCCGACGACTA+GGG | + | chr8_1:36670230-36670249 | Msa1191830:CDS | 45.0% |
| TATCCGAGCTTGCAGATGTT+TGG | + | chr8_1:36670448-36670467 | Msa1191830:three_prime_UTR | 45.0% | |
| !!! | GGGTTTTGGGCTTGAGGTTT+CGG | - | chr8_1:36665351-36665370 | None:intergenic | 50.0% |
| CTGCGGCTGAGAGAGAATTA+GGG | - | chr8_1:36665455-36665474 | None:intergenic | 50.0% | |
| CTAATTCTCTCTCAGCCGCA+GGG | + | chr8_1:36665454-36665473 | Msa1191830:five_prime_UTR | 50.0% | |
| ! | CTTCAACGCCTTTTGCTTGG+CGG | - | chr8_1:36666442-36666461 | None:intergenic | 50.0% |
| ! | GGCGTTGAAGGTAGTCAAGA+AGG | + | chr8_1:36666452-36666471 | Msa1191830:CDS | 50.0% |
| GAAGGAGGAAAGTAGTTCCG+AGG | + | chr8_1:36666470-36666489 | Msa1191830:CDS | 50.0% | |
| TAGTTCCGAGGAATCCTCTG+AGG | + | chr8_1:36666482-36666501 | Msa1191830:CDS | 50.0% | |
| ! | GGAATCCTCTGAGGAATCTG+AGG | + | chr8_1:36666491-36666510 | Msa1191830:CDS | 50.0% |
| CTCATCCTCAGATTCCTCAG+AGG | - | chr8_1:36666499-36666518 | None:intergenic | 50.0% | |
| ! | CTCTGAGGAATCTGAGGATG+AGG | + | chr8_1:36666497-36666516 | Msa1191830:CDS | 50.0% |
| !! | GATTCCTCTGAAGTGGTCTC+TGG | - | chr8_1:36666714-36666733 | None:intergenic | 50.0% |
| TGATGACATCTCCTCCGATG+AGG | + | chr8_1:36666740-36666759 | Msa1191830:CDS | 50.0% | |
| ! | GATGGAACAGCTTTAGCTGC+GGG | - | chr8_1:36666977-36666996 | None:intergenic | 50.0% |
| ! | GAAGGAACAGCTTTAGCTGC+AGG | - | chr8_1:36667242-36667261 | None:intergenic | 50.0% |
| ! | ACCTGTGGCCTCTAAGAAAG+AGG | + | chr8_1:36668074-36668093 | Msa1191830:CDS | 50.0% |
| ACCTCTTTCTTAGAGGCCAC+AGG | - | chr8_1:36668078-36668097 | None:intergenic | 50.0% | |
| ! | GAGTGATTCGTCTGATGACG+AGG | + | chr8_1:36668110-36668129 | Msa1191830:CDS | 50.0% |
| ACAGATCAAGGACGTGGAGA+TGG | + | chr8_1:36668536-36668555 | Msa1191830:intron | 50.0% | |
| !! | GGTCTCATTTGGTGTAGCTG+GGG | - | chr8_1:36668701-36668720 | None:intergenic | 50.0% |
| !! | CTGGTCTCATTTGGTGTAGC+TGG | - | chr8_1:36668703-36668722 | None:intergenic | 50.0% |
| GCTACACCAAATGAGACCAG+TGG | + | chr8_1:36668703-36668722 | Msa1191830:CDS | 50.0% | |
| AACGTTTCACGTCGAAGGAC+AGG | - | chr8_1:36668753-36668772 | None:intergenic | 50.0% | |
| GTCAGAACGTTTCACGTCGA+AGG | - | chr8_1:36668758-36668777 | None:intergenic | 50.0% | |
| TTTCTTCCAAGGTTGCGGAG+AGG | + | chr8_1:36668869-36668888 | Msa1191830:CDS | 50.0% | |
| GATGTACGTCTTGCTTCGGA+TGG | + | chr8_1:36668897-36668916 | Msa1191830:CDS | 50.0% | |
| TGTACGTCTTGCTTCGGATG+GGG | + | chr8_1:36668899-36668918 | Msa1191830:CDS | 50.0% | |
| GAGCACGATGCAACAGTTCT+TGG | - | chr8_1:36669115-36669134 | None:intergenic | 50.0% | |
| ! | GACTTGATTTAGCTCGGGAG+AGG | + | chr8_1:36669138-36669157 | Msa1191830:CDS | 50.0% |
| ! | CTTGATTTAGCTCGGGAGAG+GGG | + | chr8_1:36669140-36669159 | Msa1191830:CDS | 50.0% |
| AACTACTCAGCCCAAAGTGG+TGG | + | chr8_1:36669271-36669290 | Msa1191830:CDS | 50.0% | |
| ATTCTGCATGAGCCAAAGGG+GGG | - | chr8_1:36669371-36669390 | None:intergenic | 50.0% | |
| CATTCTGCATGAGCCAAAGG+GGG | - | chr8_1:36669372-36669391 | None:intergenic | 50.0% | |
| GTACTTGTGGGGAACCTACA+AGG | + | chr8_1:36669505-36669524 | Msa1191830:CDS | 50.0% | |
| TGCAGCATTAGGAGAAGCAG+TGG | - | chr8_1:36669592-36669611 | None:intergenic | 50.0% | |
| ! | AGTCAAGGTTCTGGTGGTAG+AGG | + | chr8_1:36669788-36669807 | Msa1191830:CDS | 50.0% |
| TTTGGTGGAGGTGGAAGAAG+CGG | + | chr8_1:36669839-36669858 | Msa1191830:CDS | 50.0% | |
| !! | AGGAGGTCGATTTGGTGGAA+GGG | + | chr8_1:36669892-36669911 | Msa1191830:CDS | 50.0% |
| !! | CGATTTGGTGGAAGGGATAG+TGG | + | chr8_1:36669899-36669918 | Msa1191830:CDS | 50.0% |
| ! | TTTGGTGGAAGGGATAGTGG+CGG | + | chr8_1:36669902-36669921 | Msa1191830:CDS | 50.0% |
| !! | GACTACTTTTGCCGACGACT+AGG | + | chr8_1:36670229-36670248 | Msa1191830:CDS | 50.0% |
| AAAACTGCCACCCTAGTCGT+CGG | - | chr8_1:36670243-36670262 | None:intergenic | 50.0% | |
| !!! | GGGTTAGGGTTTTGGGCTTG+AGG | - | chr8_1:36665357-36665376 | None:intergenic | 55.0% |
| ! | GCAGAGAGAGAGAGAGTGTG+AGG | - | chr8_1:36665421-36665440 | None:intergenic | 55.0% |
| CCTGCGGCTGAGAGAGAATT+AGG | - | chr8_1:36665456-36665475 | None:intergenic | 55.0% | |
| CCTAATTCTCTCTCAGCCGC+AGG | + | chr8_1:36665453-36665472 | Msa1191830:five_prime_UTR | 55.0% | |
| TGAGAAATTGGGGGATGCGG+CGG | - | chr8_1:36665493-36665512 | None:intergenic | 55.0% | |
| TATAGGCAAGAGGCAGGCTG+AGG | + | chr8_1:36666368-36666387 | Msa1191830:intron | 55.0% | |
| GCAGGCTGAGGAAGAAGTCA+AGG | + | chr8_1:36666380-36666399 | Msa1191830:CDS | 55.0% | |
| AGAGGTTGCCGCCAAGCAAA+AGG | + | chr8_1:36666431-36666450 | Msa1191830:CDS | 55.0% | |
| !! | CGCCAAGCAAAAGGCGTTGA+AGG | + | chr8_1:36666440-36666459 | Msa1191830:CDS | 55.0% |
| ! | GGAGCAGGAGCTTTTGCAAC+AGG | - | chr8_1:36666645-36666664 | None:intergenic | 55.0% |
| ! | GGGGTCTTCTTTGAAGGAGC+AGG | - | chr8_1:36666660-36666679 | None:intergenic | 55.0% |
| !! | CTCTGAAGTGGTCTCTGGCT+GGG | - | chr8_1:36666709-36666728 | None:intergenic | 55.0% |
| ACAGCAGCAGGCTTAGACAC+AGG | - | chr8_1:36667979-36667998 | None:intergenic | 55.0% | |
| TTCCGACTCTGACGAGAGTG+AGG | + | chr8_1:36668373-36668392 | Msa1191830:CDS | 55.0% | |
| CTCCTCACTCTCGTCAGAGT+CGG | - | chr8_1:36668378-36668397 | None:intergenic | 55.0% | |
| ! | GACGTGGAGATGGTTGATGC+TGG | + | chr8_1:36668546-36668565 | Msa1191830:CDS | 55.0% |
| CAACAACCTCTCCGCAACCT+TGG | - | chr8_1:36668878-36668897 | None:intergenic | 55.0% | |
| ! | TCAGCCCAAAGTGGTGGAAG+AGG | + | chr8_1:36669277-36669296 | Msa1191830:CDS | 55.0% |
| CTGGCCTCTTCCACCACTTT+GGG | - | chr8_1:36669284-36669303 | None:intergenic | 55.0% | |
| ! | ACTGGCCTCTTCCACCACTT+TGG | - | chr8_1:36669285-36669304 | None:intergenic | 55.0% |
| TTCTGCATGAGCCAAAGGGG+GGG | - | chr8_1:36669370-36669389 | None:intergenic | 55.0% | |
| ! | CAAGGTTCTGGTGGTAGAGG+TGG | + | chr8_1:36669791-36669810 | Msa1191830:CDS | 55.0% |
| ! | GGTGGAAGAAGCGGTGGTTT+TGG | + | chr8_1:36669848-36669867 | Msa1191830:CDS | 55.0% |
| !!! | GGAAGAAGCGGTGGTTTTGG+TGG | + | chr8_1:36669851-36669870 | Msa1191830:CDS | 55.0% |
| !!! | GAAGCGGTGGTTTTGGTGGT+AGG | + | chr8_1:36669855-36669874 | Msa1191830:CDS | 55.0% |
| !!! | GGTGGTTTTGGTGGTAGGAG+TGG | + | chr8_1:36669860-36669879 | Msa1191830:CDS | 55.0% |
| !! | GGTTTTGGTGGTAGGAGTGG+TGG | + | chr8_1:36669863-36669882 | Msa1191830:CDS | 55.0% |
| GGAAGAGGAGGAGGTCGATT+TGG | + | chr8_1:36669884-36669903 | Msa1191830:CDS | 55.0% | |
| !! | AGAGGAGGAGGTCGATTTGG+TGG | + | chr8_1:36669887-36669906 | Msa1191830:CDS | 55.0% |
| !! | GAGGAGGTCGATTTGGTGGA+AGG | + | chr8_1:36669891-36669910 | Msa1191830:CDS | 55.0% |
| ! | ACTTTTGCCGACGACTAGGG+TGG | + | chr8_1:36670233-36670252 | Msa1191830:exon | 55.0% |
| !! | CCTCTGAAGTGGTCTCTGGC+TGG | - | chr8_1:36666710-36666729 | None:intergenic | 60.0% |
| CCAGCCAGAGACCACTTCAG+AGG | + | chr8_1:36666707-36666726 | Msa1191830:CDS | 60.0% | |
| GGCTGCAGGTTTCTGAGCCA+AGG | - | chr8_1:36667673-36667692 | None:intergenic | 60.0% | |
| CGACTCTGACGAGAGTGAGG+AGG | + | chr8_1:36668376-36668395 | Msa1191830:CDS | 60.0% | |
| CGAGAGTGAGGAGGAGAGTG+AGG | + | chr8_1:36668385-36668404 | Msa1191830:CDS | 60.0% | |
| CGTCTTGCTTCGGATGGGGA+TGG | + | chr8_1:36668903-36668922 | Msa1191830:CDS | 60.0% | |
| ! | GGTTCTGGTGGTAGAGGTGG+AGG | + | chr8_1:36669794-36669813 | Msa1191830:CDS | 60.0% |
| TCTGGTGGTAGAGGTGGAGG+TGG | + | chr8_1:36669797-36669816 | Msa1191830:CDS | 60.0% | |
| GTGGTAGAGGTGGAGGTGGA+AGG | + | chr8_1:36669801-36669820 | Msa1191830:CDS | 60.0% | |
| AGAGGTGGAGGTGGAAGGAG+TGG | + | chr8_1:36669806-36669825 | Msa1191830:CDS | 60.0% | |
| !! | GTGGAAGGAGTGGTGGTGGT+CGG | + | chr8_1:36669816-36669835 | Msa1191830:CDS | 60.0% |
| !! | AGGAGTGGTGGTGGTCGGTT+TGG | + | chr8_1:36669821-36669840 | Msa1191830:CDS | 60.0% |
| !! | AGTGGTGGTGGTCGGTTTGG+TGG | + | chr8_1:36669824-36669843 | Msa1191830:CDS | 60.0% |
| ! | GGTGGTAGGAGTGGTGGAAG+AGG | + | chr8_1:36669869-36669888 | Msa1191830:CDS | 60.0% |
| ! | GGTAGGAGTGGTGGAAGAGG+AGG | + | chr8_1:36669872-36669891 | Msa1191830:CDS | 60.0% |
| ! | AGGAGTGGTGGAAGAGGAGG+AGG | + | chr8_1:36669875-36669894 | Msa1191830:CDS | 60.0% |
| ! | GGAAGGGATAGTGGCGGTAG+AGG | + | chr8_1:36669908-36669927 | Msa1191830:CDS | 60.0% |
| ! | AGGGATAGTGGCGGTAGAGG+TGG | + | chr8_1:36669911-36669930 | Msa1191830:CDS | 60.0% |
| AGAGGTGGTCGAGGAGGAAG+AGG | + | chr8_1:36669926-36669945 | Msa1191830:CDS | 60.0% | |
| CTGCAAGCTCGGATAGCTGC+AGG | - | chr8_1:36670443-36670462 | None:intergenic | 60.0% | |
| GGTGGAGGTGGAAGGAGTGG+TGG | + | chr8_1:36669809-36669828 | Msa1191830:CDS | 65.0% | |
| GGAGGTGGAAGGAGTGGTGG+TGG | + | chr8_1:36669812-36669831 | Msa1191830:CDS | 65.0% | |
| !! | GGTGGTGGTCGGTTTGGTGG+AGG | + | chr8_1:36669827-36669846 | Msa1191830:CDS | 65.0% |
| !! | GGTGGTCGGTTTGGTGGAGG+TGG | + | chr8_1:36669830-36669849 | Msa1191830:CDS | 65.0% |
| GGTGGAGGTGGAAGAAGCGG+TGG | + | chr8_1:36669842-36669861 | Msa1191830:CDS | 65.0% | |
| AGTGGCGGTAGAGGTGGTCG+AGG | + | chr8_1:36669917-36669936 | Msa1191830:CDS | 65.0% | |
| GGTGGTCGAGGAGGAAGAGG+TGG | + | chr8_1:36669929-36669948 | Msa1191830:CDS | 65.0% | |
| CGAGGAGGAAGAGGTGGTCG+TGG | + | chr8_1:36669935-36669954 | Msa1191830:CDS | 65.0% | |
| GGAGGAAGAGGTGGTCGTGG+AGG | + | chr8_1:36669938-36669957 | Msa1191830:CDS | 65.0% | |
| GGCGGTAGAGGTGGTCGAGG+AGG | + | chr8_1:36669920-36669939 | Msa1191830:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_1 | gene | 36665339 | 36670661 | 36665339 | ID=Msa1191830;Name=Msa1191830 |
| chr8_1 | mRNA | 36665339 | 36670661 | 36665339 | ID=Msa1191830-mRNA-1;Parent=Msa1191830;Name=Msa1191830-mRNA-1;_AED=0.10;_eAED=0.10;_QI=173|0.94|1|1|0.94|0.88|18|411|597 |
| chr8_1 | exon | 36665339 | 36665505 | 36665339 | ID=Msa1191830-mRNA-1:exon:12043;Parent=Msa1191830-mRNA-1 |
| chr8_1 | exon | 36665526 | 36665564 | 36665526 | ID=Msa1191830-mRNA-1:exon:12044;Parent=Msa1191830-mRNA-1 |
| chr8_1 | exon | 36665661 | 36665709 | 36665661 | ID=Msa1191830-mRNA-1:exon:12045;Parent=Msa1191830-mRNA-1 |
| chr8_1 | exon | 36666373 | 36666518 | 36666373 | ID=Msa1191830-mRNA-1:exon:12046;Parent=Msa1191830-mRNA-1 |
| chr8_1 | exon | 36666639 | 36666773 | 36666639 | ID=Msa1191830-mRNA-1:exon:12047;Parent=Msa1191830-mRNA-1 |
| chr8_1 | exon | 36667236 | 36667337 | 36667236 | ID=Msa1191830-mRNA-1:exon:12048;Parent=Msa1191830-mRNA-1 |
| chr8_1 | exon | 36667458 | 36667562 | 36667458 | ID=Msa1191830-mRNA-1:exon:12049;Parent=Msa1191830-mRNA-1 |
| chr8_1 | exon | 36667681 | 36667779 | 36667681 | ID=Msa1191830-mRNA-1:exon:12050;Parent=Msa1191830-mRNA-1 |
| chr8_1 | exon | 36667967 | 36668131 | 36667967 | ID=Msa1191830-mRNA-1:exon:12051;Parent=Msa1191830-mRNA-1 |
| chr8_1 | exon | 36668347 | 36668436 | 36668347 | ID=Msa1191830-mRNA-1:exon:12052;Parent=Msa1191830-mRNA-1 |
| chr8_1 | exon | 36668540 | 36668587 | 36668540 | ID=Msa1191830-mRNA-1:exon:12053;Parent=Msa1191830-mRNA-1 |
| chr8_1 | exon | 36668691 | 36668779 | 36668691 | ID=Msa1191830-mRNA-1:exon:12054;Parent=Msa1191830-mRNA-1 |
| chr8_1 | exon | 36668863 | 36668980 | 36668863 | ID=Msa1191830-mRNA-1:exon:12055;Parent=Msa1191830-mRNA-1 |
| chr8_1 | exon | 36669095 | 36669186 | 36669095 | ID=Msa1191830-mRNA-1:exon:12056;Parent=Msa1191830-mRNA-1 |
| chr8_1 | exon | 36669270 | 36669354 | 36669270 | ID=Msa1191830-mRNA-1:exon:12057;Parent=Msa1191830-mRNA-1 |
| chr8_1 | exon | 36669474 | 36669568 | 36669474 | ID=Msa1191830-mRNA-1:exon:12058;Parent=Msa1191830-mRNA-1 |
| chr8_1 | exon | 36669676 | 36669989 | 36669676 | ID=Msa1191830-mRNA-1:exon:12059;Parent=Msa1191830-mRNA-1 |
| chr8_1 | exon | 36670222 | 36670661 | 36670222 | ID=Msa1191830-mRNA-1:exon:12060;Parent=Msa1191830-mRNA-1 |
| chr8_1 | five_prime_UTR | 36665339 | 36665505 | 36665339 | ID=Msa1191830-mRNA-1:five_prime_utr;Parent=Msa1191830-mRNA-1 |
| chr8_1 | five_prime_UTR | 36665526 | 36665531 | 36665526 | ID=Msa1191830-mRNA-1:five_prime_utr;Parent=Msa1191830-mRNA-1 |
| chr8_1 | CDS | 36665532 | 36665564 | 36665532 | ID=Msa1191830-mRNA-1:cds;Parent=Msa1191830-mRNA-1 |
| chr8_1 | CDS | 36665661 | 36665709 | 36665661 | ID=Msa1191830-mRNA-1:cds;Parent=Msa1191830-mRNA-1 |
| chr8_1 | CDS | 36666373 | 36666518 | 36666373 | ID=Msa1191830-mRNA-1:cds;Parent=Msa1191830-mRNA-1 |
| chr8_1 | CDS | 36666639 | 36666773 | 36666639 | ID=Msa1191830-mRNA-1:cds;Parent=Msa1191830-mRNA-1 |
| chr8_1 | CDS | 36667236 | 36667337 | 36667236 | ID=Msa1191830-mRNA-1:cds;Parent=Msa1191830-mRNA-1 |
| chr8_1 | CDS | 36667458 | 36667562 | 36667458 | ID=Msa1191830-mRNA-1:cds;Parent=Msa1191830-mRNA-1 |
| chr8_1 | CDS | 36667681 | 36667779 | 36667681 | ID=Msa1191830-mRNA-1:cds;Parent=Msa1191830-mRNA-1 |
| chr8_1 | CDS | 36667967 | 36668131 | 36667967 | ID=Msa1191830-mRNA-1:cds;Parent=Msa1191830-mRNA-1 |
| chr8_1 | CDS | 36668347 | 36668436 | 36668347 | ID=Msa1191830-mRNA-1:cds;Parent=Msa1191830-mRNA-1 |
| chr8_1 | CDS | 36668540 | 36668587 | 36668540 | ID=Msa1191830-mRNA-1:cds;Parent=Msa1191830-mRNA-1 |
| chr8_1 | CDS | 36668691 | 36668779 | 36668691 | ID=Msa1191830-mRNA-1:cds;Parent=Msa1191830-mRNA-1 |
| chr8_1 | CDS | 36668863 | 36668980 | 36668863 | ID=Msa1191830-mRNA-1:cds;Parent=Msa1191830-mRNA-1 |
| chr8_1 | CDS | 36669095 | 36669186 | 36669095 | ID=Msa1191830-mRNA-1:cds;Parent=Msa1191830-mRNA-1 |
| chr8_1 | CDS | 36669270 | 36669354 | 36669270 | ID=Msa1191830-mRNA-1:cds;Parent=Msa1191830-mRNA-1 |
| chr8_1 | CDS | 36669474 | 36669568 | 36669474 | ID=Msa1191830-mRNA-1:cds;Parent=Msa1191830-mRNA-1 |
| chr8_1 | CDS | 36669676 | 36669989 | 36669676 | ID=Msa1191830-mRNA-1:cds;Parent=Msa1191830-mRNA-1 |
| chr8_1 | CDS | 36670222 | 36670250 | 36670222 | ID=Msa1191830-mRNA-1:cds;Parent=Msa1191830-mRNA-1 |
| chr8_1 | three_prime_UTR | 36670251 | 36670661 | 36670251 | ID=Msa1191830-mRNA-1:three_prime_utr;Parent=Msa1191830-mRNA-1 |
| Gene Sequence |
| Protein sequence |
