Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0068970 | sp|Q94AH9|FBRL2_ARATH | 90.984 | 244 | 22 | 0 | 71 | 314 | 74 | 317 | 1.01e-166 | 469 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0068970 | G7IDD7 | 99.365 | 315 | 0 | 1 | 1 | 315 | 1 | 313 | 0.0 | 616 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0002750 | Msa0068970 | 0.825152 | 5.477970e-54 | -8.615850e-47 |
| Msa0002790 | Msa0068970 | 0.824161 | 9.378631e-54 | -8.615850e-47 |
| Msa0044890 | Msa0068970 | 0.996321 | 4.637336e-226 | -8.615850e-47 |
| Msa0068970 | Msa0116670 | 0.814454 | 1.528079e-51 | -8.615850e-47 |
| Msa0068970 | Msa0129660 | 0.848668 | 5.294656e-60 | -8.615850e-47 |
| Msa0068970 | Msa0164770 | 0.810072 | 1.382288e-50 | -8.615850e-47 |
| Msa0068970 | Msa0173530 | 0.815239 | 1.023768e-51 | -8.615850e-47 |
| Msa0068970 | Msa0183090 | 0.964654 | 1.336430e-123 | -8.615850e-47 |
| Msa0068970 | Msa0186740 | 0.810247 | 1.267106e-50 | -8.615850e-47 |
| Msa0068970 | Msa0194940 | 0.832345 | 9.969776e-56 | -8.615850e-47 |
| Msa0068970 | Msa0210330 | 0.848861 | 4.679682e-60 | -8.615850e-47 |
| Msa0068970 | Msa0210360 | 0.814178 | 1.758311e-51 | -8.615850e-47 |
| Msa0068970 | Msa0231030 | 0.806293 | 8.826624e-50 | -8.615850e-47 |
| Msa0068970 | Msa0250820 | 0.838460 | 2.837984e-57 | -8.615850e-47 |
| Msa0068970 | Msa0250870 | 0.803402 | 3.545866e-49 | -8.615850e-47 |
| Msa0068970 | Msa0257450 | 0.836049 | 1.175165e-56 | -8.615850e-47 |
| Msa0068970 | Msa0296720 | 0.836076 | 1.156287e-56 | -8.615850e-47 |
| Msa0068970 | Msa0312210 | 0.802984 | 4.327685e-49 | -8.615850e-47 |
| Msa0068970 | Msa0335840 | 0.801687 | 8.005699e-49 | -8.615850e-47 |
| Msa0068970 | Msa0342850 | 0.858992 | 5.626636e-63 | -8.615850e-47 |
| Msa0068970 | Msa0375310 | 0.815119 | 1.088585e-51 | -8.615850e-47 |
| Msa0068970 | Msa0421500 | 0.808756 | 2.648885e-50 | -8.615850e-47 |
| Msa0068970 | Msa0426250 | 0.810740 | 9.918776e-51 | -8.615850e-47 |
| Msa0068970 | Msa0471880 | 0.835872 | 1.302644e-56 | -8.615850e-47 |
| Msa0068970 | Msa0482200 | 0.809203 | 2.124624e-50 | -8.615850e-47 |
| Msa0068970 | Msa0486070 | 0.989346 | 9.939667e-178 | -8.615850e-47 |
| Msa0068970 | Msa0544720 | 0.820197 | 7.788830e-53 | -8.615850e-47 |
| Msa0068970 | Msa0550420 | 0.848634 | 5.407379e-60 | -8.615850e-47 |
| Msa0068970 | Msa0554210 | 0.818395 | 2.004447e-52 | -8.615850e-47 |
| Msa0068970 | Msa0608260 | 0.809895 | 1.509329e-50 | -8.615850e-47 |
| Msa0068970 | Msa0648620 | 0.801123 | 1.044663e-48 | -8.615850e-47 |
| Msa0068970 | Msa0691330 | 0.812061 | 5.123622e-51 | -8.615850e-47 |
| Msa0068970 | Msa0709730 | 0.810716 | 1.003941e-50 | -8.615850e-47 |
| Msa0068970 | Msa0877540 | 0.813871 | 2.055340e-51 | -8.615850e-47 |
| Msa0068970 | Msa0930490 | 0.854447 | 1.223604e-61 | -8.615850e-47 |
| Msa0068970 | Msa1040160 | 0.822668 | 2.094121e-53 | -8.615850e-47 |
| Msa0068970 | Msa1078870 | 0.843137 | 1.685781e-58 | -8.615850e-47 |
| Msa0068970 | Msa1078980 | 0.825127 | 5.553570e-54 | -8.615850e-47 |
| Msa0068970 | Msa1079920 | 0.817853 | 2.657896e-52 | -8.615850e-47 |
| Msa0068970 | Msa1081340 | 0.812698 | 3.718638e-51 | -8.615850e-47 |
| Msa0068970 | Msa1083370 | 0.805827 | 1.106232e-49 | -8.615850e-47 |
| Msa0068970 | Msa1124850 | 0.825181 | 5.392285e-54 | -8.615850e-47 |
| Msa0068970 | Msa1128120 | 0.839600 | 1.437802e-57 | -8.615850e-47 |
| Msa0068970 | Msa1167540 | 0.844000 | 9.913120e-59 | -8.615850e-47 |
| Msa0068970 | Msa1167550 | 0.839899 | 1.202282e-57 | -8.615850e-47 |
| Msa0068970 | Msa1169180 | 0.830925 | 2.231114e-55 | -8.615850e-47 |
| Msa0068970 | Msa1191830 | 0.829326 | 5.481089e-55 | -8.615850e-47 |
| Msa0068970 | Msa1211820 | 0.801532 | 8.613277e-49 | -8.615850e-47 |
| Msa0068970 | Msa1215820 | 0.831213 | 1.895795e-55 | -8.615850e-47 |
| Msa0068970 | Msa1218110 | 0.869905 | 2.179922e-66 | -8.615850e-47 |
| Msa0068970 | Msa1225720 | 0.816865 | 4.437072e-52 | -8.615850e-47 |
| Msa0068970 | Msa1258390 | 0.833973 | 3.919752e-56 | -8.615850e-47 |
| Msa0068970 | Msa1299590 | 0.817242 | 3.649232e-52 | -8.615850e-47 |
| Msa0068970 | Msa1311400 | 0.820962 | 5.199014e-53 | -8.615850e-47 |
| Msa0068970 | Msa1332250 | 0.840540 | 8.177244e-58 | -8.615850e-47 |
| Msa0068970 | Msa1341130 | 0.856750 | 2.604602e-62 | -8.615850e-47 |
| Msa0068970 | Msa1364480 | 0.844699 | 6.432093e-59 | -8.615850e-47 |
| Msa0068970 | Msa1366180 | 0.807193 | 5.695865e-50 | -8.615850e-47 |
| Msa0068970 | Msa1397100 | 0.831395 | 1.710404e-55 | -8.615850e-47 |
| Msa0068970 | Msa1418690 | 0.866614 | 2.506446e-65 | -8.615850e-47 |
| Msa0068970 | Msa1418760 | 0.817875 | 2.628472e-52 | -8.615850e-47 |
| Msa0068970 | Msa1426120 | 0.841983 | 3.411814e-58 | -8.615850e-47 |
| Msa0068970 | Msa1444240 | 0.833452 | 5.291119e-56 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0068970 | MtrunA17_Chr1g0211621 | 99.365 | 315 | 0 | 1 | 1 | 315 | 1 | 313 | 0.0 | 616 |
| Msa0068970 | MtrunA17_Chr6g0468501 | 93.985 | 266 | 16 | 0 | 50 | 315 | 12 | 277 | 4.80e-173 | 480 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0068970 | AT4G25630.1 | 90.984 | 244 | 22 | 0 | 71 | 314 | 74 | 317 | 1.03e-167 | 469 |
| Msa0068970 | AT5G52470.1 | 90.083 | 242 | 24 | 0 | 71 | 312 | 63 | 304 | 2.79e-165 | 462 |
| Msa0068970 | AT5G52490.1 | 71.074 | 242 | 70 | 0 | 69 | 310 | 51 | 292 | 2.49e-128 | 368 |
| Msa0068970 | AT5G52470.2 | 93.902 | 164 | 10 | 0 | 71 | 234 | 63 | 226 | 3.28e-111 | 324 |
Find 123 sgRNAs with CRISPR-Local
Find 222 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGAAAATACCCTCATGTCTA+TGG | 0.205671 | 1_2:-36305234 | None:intergenic |
| GGAGGTGGGAGAGGTGGTTT+TGG | 0.245696 | 1_2:+36305070 | Msa0068970:CDS |
| TGTCTAGCATCTTCAATAAT+TGG | 0.265009 | 1_2:-36306073 | None:intergenic |
| CTTTACCTAGGAGCTGCTTC+TGG | 0.296675 | 1_2:+36305830 | Msa0068970:CDS |
| AGTTATACAACATGCATATA+GGG | 0.304600 | 1_2:-36307942 | None:intergenic |
| TAAAATATAGTGATATGTTT+TGG | 0.324425 | 1_2:+36307884 | Msa0068970:three_prime_UTR |
| TATAACATTAGTACGCTTCT+TGG | 0.324454 | 1_2:-36306050 | None:intergenic |
| CTAAGACAGAGTATAGAATT+TGG | 0.324854 | 1_2:+36305648 | Msa0068970:CDS |
| CAGTTATACAACATGCATAT+AGG | 0.348827 | 1_2:-36307943 | None:intergenic |
| GGAGGAAGGGGTGGTGATAG+AGG | 0.351363 | 1_2:+36305040 | Msa0068970:CDS |
| TGGGCGTGACTTGGTCAATA+TGG | 0.352165 | 1_2:+36306027 | Msa0068970:CDS |
| TCAAGAGTCACTTGCTCCAT+TGG | 0.352395 | 1_2:-36307615 | None:intergenic |
| GGCCGTGGTGGTTCTGGTGG+AGG | 0.363670 | 1_2:+36305010 | Msa0068970:intron |
| TGTACAGGCCGTGGTGGTTC+TGG | 0.364877 | 1_2:+36305004 | Msa0068970:intron |
| GGAGGCCGTGGTGGCGGAAG+AGG | 0.374341 | 1_2:+36305172 | Msa0068970:CDS |
| GGAGGTAGAGGAGGTGGGAG+AGG | 0.378171 | 1_2:+36305061 | Msa0068970:CDS |
| GATAGAGGAGGTAGAGGAGG+TGG | 0.391157 | 1_2:+36305055 | Msa0068970:CDS |
| CGGAAGAGGTGGTGGAATGA+AGG | 0.392714 | 1_2:+36305186 | Msa0068970:CDS |
| AGGGACCATGCTTGTGTTGT+TGG | 0.394797 | 1_2:+36307648 | Msa0068970:CDS |
| GTCACTAAGAATCTTGTTCC+TGG | 0.395090 | 1_2:+36305283 | Msa0068970:CDS |
| GGCAGAGGAGGACGTGGAGG+AGG | 0.399351 | 1_2:+36305154 | Msa0068970:CDS |
| TGATGTTGCTCAGCCTGATC+AGG | 0.400610 | 1_2:+36306144 | Msa0068970:CDS |
| AGAGGTGGCGGTAGAGGCGG+AGG | 0.402146 | 1_2:+36305130 | Msa0068970:CDS |
| GGAGGGTTCAGAGGAGGAAG+GGG | 0.404742 | 1_2:+36305028 | Msa0068970:CDS |
| CGTGGAGGAGGCCGTGGTGG+CGG | 0.406160 | 1_2:+36305166 | Msa0068970:CDS |
| GGTAGAGGCGGAGGAGGCAG+AGG | 0.408492 | 1_2:+36305139 | Msa0068970:CDS |
| GGTGGCGGTAGAGGCGGAGG+AGG | 0.421527 | 1_2:+36305133 | Msa0068970:CDS |
| GGGTTCAGAGGAGGAAGGGG+TGG | 0.421936 | 1_2:+36305031 | Msa0068970:CDS |
| ACACTTTGTTATTTCTATCA+AGG | 0.422492 | 1_2:+36307188 | Msa0068970:CDS |
| TTGGTGGTGTCGACAATATA+TGG | 0.424660 | 1_2:+36305705 | Msa0068970:CDS |
| GGAGGACGTGGAGGAGGCCG+TGG | 0.430468 | 1_2:+36305160 | Msa0068970:CDS |
| AAATTAAACCACACCTGATC+AGG | 0.438185 | 1_2:-36306157 | None:intergenic |
| GGAGGACGAGGAGGAGATAG+AGG | 0.440185 | 1_2:+36305091 | Msa0068970:CDS |
| GGAGGAGGCAGAGGAGGACG+TGG | 0.443901 | 1_2:+36305148 | Msa0068970:CDS |
| AACTGTGGAATCAATACAAT+TGG | 0.448320 | 1_2:-36307535 | None:intergenic |
| CGTGTTCTGTTACCTCGAAC+AGG | 0.448367 | 1_2:-36304825 | None:intergenic |
| GCCAACCAACATTCTGTACT+TGG | 0.454773 | 1_2:-36306101 | None:intergenic |
| CCATCGAAGTGGGCGTGACT+TGG | 0.458744 | 1_2:+36306018 | Msa0068970:CDS |
| ATAGAGGAGGTAGAGGAGGT+GGG | 0.464408 | 1_2:+36305056 | Msa0068970:CDS |
| CGTGGTGGCGGAAGAGGTGG+TGG | 0.465952 | 1_2:+36305178 | Msa0068970:CDS |
| GCTAGAGGTGGCGGTAGAGG+CGG | 0.468529 | 1_2:+36305127 | Msa0068970:CDS |
| AAGGCTAGAGGTGGCGGTAG+AGG | 0.468910 | 1_2:+36305124 | Msa0068970:CDS |
| TCTCATGTGTCTGATATTGT+TGG | 0.470006 | 1_2:+36305863 | Msa0068970:CDS |
| AGATAGAGGTACCCCTTTCA+AGG | 0.470760 | 1_2:+36305105 | Msa0068970:CDS |
| AAGTTGGCAGCTGCTGTCCT+TGG | 0.472296 | 1_2:+36305686 | Msa0068970:CDS |
| GCCGTGGTGGTTCTGGTGGA+GGG | 0.473475 | 1_2:+36305011 | Msa0068970:CDS |
| GGTAGAGGAGGTGGGAGAGG+TGG | 0.474660 | 1_2:+36305064 | Msa0068970:CDS |
| CGCCACCTCTAGCCTTGAAA+GGG | 0.477576 | 1_2:-36305117 | None:intergenic |
| GAAAATACCCTCATGTCTAT+GGG | 0.477789 | 1_2:-36305233 | None:intergenic |
| CCAAGTCACGCCCACTTCGA+TGG | 0.482871 | 1_2:-36306018 | None:intergenic |
| AGAGGCGGAGGAGGCAGAGG+AGG | 0.484426 | 1_2:+36305142 | Msa0068970:CDS |
| GGTGGTGATAGAGGAGGTAG+AGG | 0.485873 | 1_2:+36305049 | Msa0068970:CDS |
| GGCCGTGGTGGCGGAAGAGG+TGG | 0.485933 | 1_2:+36305175 | Msa0068970:CDS |
| GGAAGAGGTGGTGGAATGAA+GGG | 0.492329 | 1_2:+36305187 | Msa0068970:CDS |
| CAAGCATGGTCCCTCTCAAA+TGG | 0.492656 | 1_2:-36307639 | None:intergenic |
| GACCATGCTTGTGTTGTTGG+TGG | 0.497588 | 1_2:+36307651 | Msa0068970:CDS |
| TGAGAAGAGGGTTACCGTGC+AGG | 0.499140 | 1_2:+36305321 | Msa0068970:CDS |
| ACCAACATTCTGTACTTGGC+GGG | 0.501411 | 1_2:-36306097 | None:intergenic |
| GCGCTGAATACTGCCTCAGC+TGG | 0.502016 | 1_2:-36307558 | None:intergenic |
| GCTTCATATTATCTCAAAGC+TGG | 0.503141 | 1_2:+36307162 | Msa0068970:CDS |
| GGTGATAGAGGAGGTAGAGG+AGG | 0.504276 | 1_2:+36305052 | Msa0068970:CDS |
| CAGAAGCAGCTCCTAGGTAA+AGG | 0.506248 | 1_2:-36305829 | None:intergenic |
| CTCAAAATATAGAGGCTACT+CGG | 0.506705 | 1_2:-36307703 | None:intergenic |
| CCGCCACCTCTAGCCTTGAA+AGG | 0.514108 | 1_2:-36305118 | None:intergenic |
| TTGGCAGCTGCTGTCCTTGG+TGG | 0.517332 | 1_2:+36305689 | Msa0068970:CDS |
| AGCTGATCAATTTAAGCCAA+TGG | 0.520445 | 1_2:+36307599 | Msa0068970:CDS |
| TTGTTCCAGAAGCAGCTCCT+AGG | 0.523899 | 1_2:-36305835 | None:intergenic |
| TTGATGAGAACGGCTACAAA+GGG | 0.524003 | 1_2:-36304772 | None:intergenic |
| TCATTGTAAACAGCTTCTCC+AGG | 0.524882 | 1_2:-36305301 | None:intergenic |
| AACCAACATTCTGTACTTGG+CGG | 0.526725 | 1_2:-36306098 | None:intergenic |
| GGAGGCAGAGGAGGACGTGG+AGG | 0.526880 | 1_2:+36305151 | Msa0068970:CDS |
| TGGAATGAAGGGAGGAAGCA+AGG | 0.532988 | 1_2:+36305198 | Msa0068970:CDS |
| ACAATGGCTCCTCCTGTTCG+AGG | 0.533054 | 1_2:+36304813 | Msa0068970:exon |
| ACTTATGTTATATTTGCTGA+TGG | 0.533939 | 1_2:+36307834 | Msa0068970:three_prime_UTR |
| TGGAGGGTTCAGAGGAGGAA+GGG | 0.537472 | 1_2:+36305027 | Msa0068970:CDS |
| GAACCCTTTCCGTTCTAAGT+TGG | 0.539930 | 1_2:+36305670 | Msa0068970:CDS |
| GTACAGAATGTTGGTTGGCA+TGG | 0.545696 | 1_2:+36306105 | Msa0068970:CDS |
| TACCATTGTGTCACCAACTT+AGG | 0.548669 | 1_2:+36307734 | Msa0068970:three_prime_UTR |
| CCTTTCAAGGCTAGAGGTGG+CGG | 0.550070 | 1_2:+36305118 | Msa0068970:CDS |
| TTTGATGAGAACGGCTACAA+AGG | 0.552434 | 1_2:-36304773 | None:intergenic |
| TGCGAAGAGTTTGATGAGAA+CGG | 0.554186 | 1_2:-36304782 | None:intergenic |
| TACTGCCTCAGCTGGAACTG+TGG | 0.556438 | 1_2:-36307550 | None:intergenic |
| CTGCCAACTTAGAACGGAAA+GGG | 0.557631 | 1_2:-36305673 | None:intergenic |
| AGGTAAAGGACTTTAGCGCC+AGG | 0.557851 | 1_2:-36305815 | None:intergenic |
| CAAGTCACGCCCACTTCGAT+GGG | 0.558873 | 1_2:-36306017 | None:intergenic |
| ACAGGCCGTGGTGGTTCTGG+TGG | 0.566444 | 1_2:+36305007 | Msa0068970:intron |
| GACTCTTGAACCATTTGAGA+GGG | 0.572197 | 1_2:+36307629 | Msa0068970:CDS |
| GTGGAGGGTTCAGAGGAGGA+AGG | 0.574068 | 1_2:+36305026 | Msa0068970:CDS |
| GGTTCTGGTGGAGGGTTCAG+AGG | 0.575244 | 1_2:+36305019 | Msa0068970:CDS |
| AGAGGTGGTGGAATGAAGGG+AGG | 0.576093 | 1_2:+36305190 | Msa0068970:CDS |
| GGACGTGGAGGAGGCCGTGG+TGG | 0.585474 | 1_2:+36305163 | Msa0068970:CDS |
| CAGCAGCTGCCAACTTAGAA+CGG | 0.593341 | 1_2:-36305679 | None:intergenic |
| TCTGGTGGAGGGTTCAGAGG+AGG | 0.598909 | 1_2:+36305022 | Msa0068970:CDS |
| GGAAGGGGTGGTGATAGAGG+AGG | 0.599693 | 1_2:+36305043 | Msa0068970:CDS |
| AAGCTGTTTACAATGAGAAG+AGG | 0.601232 | 1_2:+36305308 | Msa0068970:CDS |
| AGCTGTTTACAATGAGAAGA+GGG | 0.603845 | 1_2:+36305309 | Msa0068970:CDS |
| GTTGAACCCCATAGACATGA+GGG | 0.606951 | 1_2:+36305226 | Msa0068970:CDS |
| GTTATACAACATGCATATAG+GGG | 0.607535 | 1_2:-36307941 | None:intergenic |
| TGATTCCACAGTTCCAGCTG+AGG | 0.607935 | 1_2:+36307545 | Msa0068970:CDS |
| TGACTCTTGAACCATTTGAG+AGG | 0.609035 | 1_2:+36307628 | Msa0068970:CDS |
| GCATATAGGGGTTAGACTCG+TGG | 0.613422 | 1_2:-36307929 | None:intergenic |
| GCCAAGTACAGAATGTTGGT+TGG | 0.614552 | 1_2:+36306100 | Msa0068970:CDS |
| TCCCGCCAAGTACAGAATGT+TGG | 0.621000 | 1_2:+36306096 | Msa0068970:CDS |
| TGAATTTGTACAGGCCGTGG+TGG | 0.621278 | 1_2:+36304998 | Msa0068970:intron |
| TGTTGAACCCCATAGACATG+AGG | 0.622170 | 1_2:+36305225 | Msa0068970:CDS |
| TAGAATTCTCCCATCGAAGT+GGG | 0.624110 | 1_2:+36306008 | Msa0068970:CDS |
| TCATATTATCTCAAAGCTGG+AGG | 0.625407 | 1_2:+36307165 | Msa0068970:CDS |
| ACCCCTTTCAAGGCTAGAGG+TGG | 0.626063 | 1_2:+36305115 | Msa0068970:CDS |
| CTCCTAAGTTGGTGACACAA+TGG | 0.628348 | 1_2:-36307736 | None:intergenic |
| GCTGCCAACTTAGAACGGAA+AGG | 0.630241 | 1_2:-36305674 | None:intergenic |
| CACCACCTCTTCCGCCACCA+CGG | 0.647973 | 1_2:-36305177 | None:intergenic |
| AGCCACCAACAACACAAGCA+TGG | 0.648785 | 1_2:-36307653 | None:intergenic |
| TCTTCGCAATCTCTCTACAA+TGG | 0.652523 | 1_2:+36304797 | Msa0068970:exon |
| GGTACCCCTTTCAAGGCTAG+AGG | 0.653441 | 1_2:+36305112 | Msa0068970:CDS |
| AAAATACCCTCATGTCTATG+GGG | 0.663716 | 1_2:-36305232 | None:intergenic |
| GTAGAATTCTCCCATCGAAG+TGG | 0.663836 | 1_2:+36306007 | Msa0068970:CDS |
| GGCGCTAAAGTCCTTTACCT+AGG | 0.679116 | 1_2:+36305818 | Msa0068970:CDS |
| ACCCTCCACCAGAACCACCA+CGG | 0.696616 | 1_2:-36305012 | None:intergenic |
| GCCACCTCTAGCCTTGAAAG+GGG | 0.697135 | 1_2:-36305116 | None:intergenic |
| TGAGAAAGGAAATACCTGCA+CGG | 0.697697 | 1_2:-36305335 | None:intergenic |
| GTTCTGTTACCTCGAACAGG+AGG | 0.699595 | 1_2:-36304822 | None:intergenic |
| TGAGGCAGTATTCAGCGCTG+AGG | 0.706093 | 1_2:+36307563 | Msa0068970:CDS |
| ATATATTGTCGACACCACCA+AGG | 0.737399 | 1_2:-36305703 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTAAATTTTAATTTTTTTTT+TGG | + | chr1_2:36307480-36307499 | Msa0068970:intron | 0.0% |
| !!! | TTTATTTGTTAAAATCAAAT+GGG | + | chr1_2:36304898-36304917 | Msa0068970:intron | 10.0% |
| !! | TGAAAATTTATAAACAAAAT+TGG | - | chr1_2:36306551-36306570 | None:intergenic | 10.0% |
| !! | GAAAATCATTAAAATAAATT+AGG | - | chr1_2:36306806-36306825 | None:intergenic | 10.0% |
| !!! | TTTTTAATTTGTTAACTTTT+TGG | + | chr1_2:36306829-36306848 | Msa0068970:intron | 10.0% |
| !!! | CATTTGATTTTAACAAATAA+AGG | - | chr1_2:36304899-36304918 | None:intergenic | 15.0% |
| !!! | CTTTATTTGTTAAAATCAAA+TGG | + | chr1_2:36304897-36304916 | Msa0068970:intron | 15.0% |
| !! | TGTCAATATAATGTATTTAA+AGG | - | chr1_2:36305769-36305788 | None:intergenic | 15.0% |
| !!! | TTATATTGACATCTTAATTT+TGG | + | chr1_2:36305778-36305797 | Msa0068970:intron | 15.0% |
| !! | ATATGATGTTTATTAAATAG+TGG | + | chr1_2:36306894-36306913 | Msa0068970:intron | 15.0% |
| !! | TAATGCATAACAAAAAAATA+CGG | - | chr1_2:36307292-36307311 | None:intergenic | 15.0% |
| !!! | CAATTTTATTTTGTATTTGT+AGG | + | chr1_2:36307512-36307531 | Msa0068970:intron | 15.0% |
| !!! | TTTTTTATCACTTGTTATTT+AGG | + | chr1_2:36307761-36307780 | Msa0068970:three_prime_UTR | 15.0% |
| !!! | TCACTATATTTTAGTAATTT+TGG | - | chr1_2:36307877-36307896 | None:intergenic | 15.0% |
| !!! | TAAAATATAGTGATATGTTT+TGG | + | chr1_2:36307884-36307903 | Msa0068970:three_prime_UTR | 15.0% |
| !! | ATGTTATTGTCTAGTAAAAT+AGG | - | chr1_2:36305464-36305483 | None:intergenic | 20.0% |
| !! | CATGTTATTCTATTTAATAG+TGG | + | chr1_2:36305582-36305601 | Msa0068970:intron | 20.0% |
| !!! | GTGTAAAATGTAAAATGTTT+TGG | + | chr1_2:36306356-36306375 | Msa0068970:intron | 20.0% |
| !! | CGAAAATTTATAAACAAAAC+AGG | - | chr1_2:36306525-36306544 | None:intergenic | 20.0% |
| !!! | TGTTTTATAATGTTAAGAAC+AGG | + | chr1_2:36306712-36306731 | Msa0068970:intron | 20.0% |
| !!! | TTTTAAAGCTTACTTTCTAT+AGG | + | chr1_2:36307250-36307269 | Msa0068970:intron | 20.0% |
| ! | AATAAACTCTAATTCGAACA+AGG | - | chr1_2:36304859-36304878 | None:intergenic | 25.0% |
| ! | AACACAAAACATACATATGT+TGG | - | chr1_2:36305933-36305952 | None:intergenic | 25.0% |
| !! | ATATGTATGTTTTGTGTTTG+AGG | + | chr1_2:36305935-36305954 | Msa0068970:intron | 25.0% |
| ! | TATAATGTTAAGAACAGGAT+TGG | + | chr1_2:36306717-36306736 | Msa0068970:intron | 25.0% |
| ! | ATAATGTTAAGAACAGGATT+GGG | + | chr1_2:36306718-36306737 | Msa0068970:intron | 25.0% |
| ! | TAAAATAAATTAGGCTCAAC+TGG | - | chr1_2:36306797-36306816 | None:intergenic | 25.0% |
| ! | TGATGTTTATTAAATAGTGG+TGG | + | chr1_2:36306897-36306916 | Msa0068970:intron | 25.0% |
| ! | TATACTATGTTGATATTTGC+AGG | + | chr1_2:36307119-36307138 | Msa0068970:intron | 25.0% |
| !!! | ACACTTTGTTATTTCTATCA+AGG | + | chr1_2:36307188-36307207 | Msa0068970:CDS | 25.0% |
| !!! | AGCTTTAAAAAACAAGAAAC+TGG | - | chr1_2:36307240-36307259 | None:intergenic | 25.0% |
| ! | ACTTCAATAACAATAAACCA+TGG | + | chr1_2:36307311-36307330 | Msa0068970:intron | 25.0% |
| ! | CTTCAATAACAATAAACCAT+GGG | + | chr1_2:36307312-36307331 | Msa0068970:intron | 25.0% |
| !! | TTTTGACCTTATAACTTCAT+TGG | + | chr1_2:36307375-36307394 | Msa0068970:intron | 25.0% |
| ! | ATCTATCCAATGAAGTTATA+AGG | - | chr1_2:36307384-36307403 | None:intergenic | 25.0% |
| !! | ATTCATTCACCATTTTACAA+AGG | - | chr1_2:36307421-36307440 | None:intergenic | 25.0% |
| !! | CATGTTTTCTCAAAATATAG+AGG | - | chr1_2:36307714-36307733 | None:intergenic | 25.0% |
| ! | GATAAAAAAAACTCCTAAGT+TGG | - | chr1_2:36307750-36307769 | None:intergenic | 25.0% |
| !! | ACTTATGTTATATTTGCTGA+TGG | + | chr1_2:36307834-36307853 | Msa0068970:three_prime_UTR | 25.0% |
| ! | AGTTATACAACATGCATATA+GGG | - | chr1_2:36307945-36307964 | None:intergenic | 25.0% |
| CTAAGACAGAGTATAGAATT+TGG | + | chr1_2:36305648-36305667 | Msa0068970:CDS | 30.0% | |
| !! | TTGGTTTTTATCTAGAAACC+TGG | + | chr1_2:36305797-36305816 | Msa0068970:intron | 30.0% |
| ! | CAAGTTGAACTAATACTTAC+AGG | - | chr1_2:36305890-36305909 | None:intergenic | 30.0% |
| CTGTAAGTATTAGTTCAACT+TGG | + | chr1_2:36305888-36305907 | Msa0068970:intron | 30.0% | |
| TATAACATTAGTACGCTTCT+TGG | - | chr1_2:36306053-36306072 | None:intergenic | 30.0% | |
| TGTCTAGCATCTTCAATAAT+TGG | - | chr1_2:36306076-36306095 | None:intergenic | 30.0% | |
| TGCATTAGTAGAAAAGTGAA+TGG | - | chr1_2:36306240-36306259 | None:intergenic | 30.0% | |
| ! | ACTGATTTAATGTGTCTTGA+TGG | + | chr1_2:36306299-36306318 | Msa0068970:intron | 30.0% |
| !!! | TGTTTTGGTTACTACAACAT+CGG | + | chr1_2:36306371-36306390 | Msa0068970:intron | 30.0% |
| AAATATGTGCATCAGAATCT+CGG | - | chr1_2:36306451-36306470 | None:intergenic | 30.0% | |
| ! | AGATTCTGATGCACATATTT+TGG | + | chr1_2:36306451-36306470 | Msa0068970:intron | 30.0% |
| TAATGTTAAGAACAGGATTG+GGG | + | chr1_2:36306719-36306738 | Msa0068970:intron | 30.0% | |
| CAAGGATATAATGCAAGATA+CGG | - | chr1_2:36306963-36306982 | None:intergenic | 30.0% | |
| AGATTGCAAATCAACAATCA+AGG | - | chr1_2:36306981-36307000 | None:intergenic | 30.0% | |
| !! | TTGATTGTTGATTTGCAATC+TGG | + | chr1_2:36306980-36306999 | Msa0068970:intron | 30.0% |
| TAATGTTAACCAAATAGCAG+TGG | + | chr1_2:36307060-36307079 | Msa0068970:intron | 30.0% | |
| AATGTTAACCAAATAGCAGT+GGG | + | chr1_2:36307061-36307080 | Msa0068970:intron | 30.0% | |
| ! | TATTTGCAGGCAAGAATTTT+AGG | + | chr1_2:36307132-36307151 | Msa0068970:intron | 30.0% |
| CTTACTTTCTATAGGAATCT+TGG | + | chr1_2:36307258-36307277 | Msa0068970:intron | 30.0% | |
| GAAGTTATAAGGTCAAAATG+AGG | - | chr1_2:36307373-36307392 | None:intergenic | 30.0% | |
| ! | CCATTTTACAAAGGTTTGAA+GGG | - | chr1_2:36307412-36307431 | None:intergenic | 30.0% |
| ! | ACCATTTTACAAAGGTTTGA+AGG | - | chr1_2:36307413-36307432 | None:intergenic | 30.0% |
| AACTGTGGAATCAATACAAT+TGG | - | chr1_2:36307538-36307557 | None:intergenic | 30.0% | |
| GTTATACAACATGCATATAG+GGG | - | chr1_2:36307944-36307963 | None:intergenic | 30.0% | |
| CAGTTATACAACATGCATAT+AGG | - | chr1_2:36307946-36307965 | None:intergenic | 30.0% | |
| AACTCTAATTCGAACAAGGA+TGG | - | chr1_2:36304855-36304874 | None:intergenic | 35.0% | |
| TTGTTGCGTTGAATTTGTAC+AGG | + | chr1_2:36304989-36305008 | Msa0068970:intron | 35.0% | |
| AAAATACCCTCATGTCTATG+GGG | - | chr1_2:36305235-36305254 | None:intergenic | 35.0% | |
| GAAAATACCCTCATGTCTAT+GGG | - | chr1_2:36305236-36305255 | None:intergenic | 35.0% | |
| TGAAAATACCCTCATGTCTA+TGG | - | chr1_2:36305237-36305256 | None:intergenic | 35.0% | |
| !!! | TGAGGGTATTTTCATTGCTA+AGG | + | chr1_2:36305243-36305262 | Msa0068970:CDS | 35.0% |
| !!! | GAGGGTATTTTCATTGCTAA+GGG | + | chr1_2:36305244-36305263 | Msa0068970:CDS | 35.0% |
| AAGCTGTTTACAATGAGAAG+AGG | + | chr1_2:36305308-36305327 | Msa0068970:CDS | 35.0% | |
| AGCTGTTTACAATGAGAAGA+GGG | + | chr1_2:36305309-36305328 | Msa0068970:CDS | 35.0% | |
| ATTCAAAGCACAAACATCCA+AGG | - | chr1_2:36305362-36305381 | None:intergenic | 35.0% | |
| ! | GACATATTTTCTGCAGAATG+AGG | + | chr1_2:36305619-36305638 | Msa0068970:intron | 35.0% |
| ! | TATTTTCTGCAGAATGAGGA+TGG | + | chr1_2:36305623-36305642 | Msa0068970:intron | 35.0% |
| TCTCATGTGTCTGATATTGT+TGG | + | chr1_2:36305863-36305882 | Msa0068970:CDS | 35.0% | |
| CATGTTCTGTTTATGTAGAC+TGG | + | chr1_2:36305971-36305990 | Msa0068970:intron | 35.0% | |
| AAATTAAACCACACCTGATC+AGG | - | chr1_2:36306160-36306179 | None:intergenic | 35.0% | |
| ATCATCCAAGAAGTCTTGAA+GGG | - | chr1_2:36306422-36306441 | None:intergenic | 35.0% | |
| AATATGTGCATCAGAATCTC+GGG | - | chr1_2:36306450-36306469 | None:intergenic | 35.0% | |
| ATCATCCAAGAAGTCTTGAA+GGG | - | chr1_2:36306422-36306441 | None:intergenic | 35.0% | |
| ATTGATGTGCATCAGAATCT+CGG | - | chr1_2:36306663-36306682 | None:intergenic | 35.0% | |
| AATGTTAAGAACAGGATTGG+GGG | + | chr1_2:36306720-36306739 | Msa0068970:intron | 35.0% | |
| !! | TAATGACTTGTTTAGGCACA+TGG | + | chr1_2:36306746-36306765 | Msa0068970:intron | 35.0% |
| TAGGCTCAACTGGAAAAAAA+GGG | - | chr1_2:36306787-36306806 | None:intergenic | 35.0% | |
| TTAGGCTCAACTGGAAAAAA+AGG | - | chr1_2:36306788-36306807 | None:intergenic | 35.0% | |
| !! | ACCTTGCAGTAAGTCATTTT+TGG | + | chr1_2:36306928-36306947 | Msa0068970:intron | 35.0% |
| ACCAAAAATGACTTACTGCA+AGG | - | chr1_2:36306932-36306951 | None:intergenic | 35.0% | |
| GCTTCATATTATCTCAAAGC+TGG | + | chr1_2:36307162-36307181 | Msa0068970:CDS | 35.0% | |
| TCATATTATCTCAAAGCTGG+AGG | + | chr1_2:36307165-36307184 | Msa0068970:CDS | 35.0% | |
| CAATAAACCATGGGAAAATG+AGG | + | chr1_2:36307321-36307340 | Msa0068970:intron | 35.0% | |
| ! | ATACTAACCTCATTTTCCCA+TGG | - | chr1_2:36307331-36307350 | None:intergenic | 35.0% |
| TGGGAAAATGAGGTTAGTAT+TGG | + | chr1_2:36307331-36307350 | Msa0068970:intron | 35.0% | |
| CCCTTCAAACCTTTGTAAAA+TGG | + | chr1_2:36307409-36307428 | Msa0068970:intron | 35.0% | |
| AGCTGATCAATTTAAGCCAA+TGG | + | chr1_2:36307599-36307618 | Msa0068970:CDS | 35.0% | |
| !!! | TCGGCATCTTTTTTCTTCTT+GGG | - | chr1_2:36307687-36307706 | None:intergenic | 35.0% |
| CTCAAAATATAGAGGCTACT+CGG | - | chr1_2:36307706-36307725 | None:intergenic | 35.0% | |
| TTGATGAGAACGGCTACAAA+GGG | - | chr1_2:36304775-36304794 | None:intergenic | 40.0% | |
| TTTGATGAGAACGGCTACAA+AGG | - | chr1_2:36304776-36304795 | None:intergenic | 40.0% | |
| TGCGAAGAGTTTGATGAGAA+CGG | - | chr1_2:36304785-36304804 | None:intergenic | 40.0% | |
| TCTTCGCAATCTCTCTACAA+TGG | + | chr1_2:36304797-36304816 | Msa0068970:exon | 40.0% | |
| GTCACTAAGAATCTTGTTCC+TGG | + | chr1_2:36305283-36305302 | Msa0068970:CDS | 40.0% | |
| TCATTGTAAACAGCTTCTCC+AGG | - | chr1_2:36305304-36305323 | None:intergenic | 40.0% | |
| TGAGAAAGGAAATACCTGCA+CGG | - | chr1_2:36305338-36305357 | None:intergenic | 40.0% | |
| GGTATTTCCTTTCTCATCCT+TGG | + | chr1_2:36305342-36305361 | Msa0068970:intron | 40.0% | |
| CAAACATCCAAGGATGAGAA+AGG | - | chr1_2:36305352-36305371 | None:intergenic | 40.0% | |
| ATATATTGTCGACACCACCA+AGG | - | chr1_2:36305706-36305725 | None:intergenic | 40.0% | |
| !! | TTGGTGGTGTCGACAATATA+TGG | + | chr1_2:36305705-36305724 | Msa0068970:CDS | 40.0% |
| TAGAATTCTCCCATCGAAGT+GGG | + | chr1_2:36306008-36306027 | Msa0068970:CDS | 40.0% | |
| AACCAACATTCTGTACTTGG+CGG | - | chr1_2:36306101-36306120 | None:intergenic | 40.0% | |
| TCATCCAAGAAGTCTTGAAG+GGG | - | chr1_2:36306421-36306440 | None:intergenic | 40.0% | |
| CATCATCCAAGAAGTCTTGA+AGG | - | chr1_2:36306423-36306442 | None:intergenic | 40.0% | |
| AGTGCATGTGATGAGTTACT+CGG | + | chr1_2:36306604-36306623 | Msa0068970:intron | 40.0% | |
| TCATCCAAGAAGTCTTGAAG+GGG | - | chr1_2:36306421-36306440 | None:intergenic | 40.0% | |
| CATCATCCAAGAAGTCTTGA+AGG | - | chr1_2:36306423-36306442 | None:intergenic | 40.0% | |
| TTGATGTGCATCAGAATCTC+GGG | - | chr1_2:36306662-36306681 | None:intergenic | 40.0% | |
| ACACTGACACGTAGAATACA+TGG | - | chr1_2:36307095-36307114 | None:intergenic | 40.0% | |
| TGTCAATGTTGATGCTTGCT+TGG | + | chr1_2:36307444-36307463 | Msa0068970:intron | 40.0% | |
| TGACTCTTGAACCATTTGAG+AGG | + | chr1_2:36307628-36307647 | Msa0068970:CDS | 40.0% | |
| GACTCTTGAACCATTTGAGA+GGG | + | chr1_2:36307629-36307648 | Msa0068970:CDS | 40.0% | |
| !!! | CTCGGCATCTTTTTTCTTCT+TGG | - | chr1_2:36307688-36307707 | None:intergenic | 40.0% |
| TACCATTGTGTCACCAACTT+AGG | + | chr1_2:36307734-36307753 | Msa0068970:three_prime_UTR | 40.0% | |
| !! | AGATAGAGGTACCCCTTTCA+AGG | + | chr1_2:36305105-36305124 | Msa0068970:CDS | 45.0% |
| TGTTGAACCCCATAGACATG+AGG | + | chr1_2:36305225-36305244 | Msa0068970:CDS | 45.0% | |
| GTTGAACCCCATAGACATGA+GGG | + | chr1_2:36305226-36305245 | Msa0068970:CDS | 45.0% | |
| ! | GAACCCTTTCCGTTCTAAGT+TGG | + | chr1_2:36305670-36305689 | Msa0068970:CDS | 45.0% |
| CTGCCAACTTAGAACGGAAA+GGG | - | chr1_2:36305676-36305695 | None:intergenic | 45.0% | |
| GTAGAATTCTCCCATCGAAG+TGG | + | chr1_2:36306007-36306026 | Msa0068970:CDS | 45.0% | |
| ACCAACATTCTGTACTTGGC+GGG | - | chr1_2:36306100-36306119 | None:intergenic | 45.0% | |
| GCCAAGTACAGAATGTTGGT+TGG | + | chr1_2:36306100-36306119 | Msa0068970:CDS | 45.0% | |
| GCCAACCAACATTCTGTACT+TGG | - | chr1_2:36306104-36306123 | None:intergenic | 45.0% | |
| ! | GTACAGAATGTTGGTTGGCA+TGG | + | chr1_2:36306105-36306124 | Msa0068970:CDS | 45.0% |
| GGTGCATGTGATGAGTTACT+CGG | + | chr1_2:36306392-36306411 | Msa0068970:intron | 45.0% | |
| GATTCCCCTTCAAGACTTCT+TGG | + | chr1_2:36306414-36306433 | Msa0068970:intron | 45.0% | |
| GATTCCCCTTCAAGACTTCT+TGG | + | chr1_2:36306414-36306433 | Msa0068970:intron | 45.0% | |
| !! | GGGGCAGTAATGACTTGTTT+AGG | + | chr1_2:36306739-36306758 | Msa0068970:intron | 45.0% |
| AGATTCGTCCCACTGCTATT+TGG | - | chr1_2:36307072-36307091 | None:intergenic | 45.0% | |
| TCAAGAGTCACTTGCTCCAT+TGG | - | chr1_2:36307618-36307637 | None:intergenic | 45.0% | |
| !! | CTCCTAAGTTGGTGACACAA+TGG | - | chr1_2:36307739-36307758 | None:intergenic | 45.0% |
| GTTCTGTTACCTCGAACAGG+AGG | - | chr1_2:36304825-36304844 | None:intergenic | 50.0% | |
| CGTGTTCTGTTACCTCGAAC+AGG | - | chr1_2:36304828-36304847 | None:intergenic | 50.0% | |
| CGTTGAATTTGTACAGGCCG+TGG | + | chr1_2:36304995-36305014 | Msa0068970:intron | 50.0% | |
| TGAATTTGTACAGGCCGTGG+TGG | + | chr1_2:36304998-36305017 | Msa0068970:intron | 50.0% | |
| ATAGAGGAGGTAGAGGAGGT+GGG | + | chr1_2:36305056-36305075 | Msa0068970:CDS | 50.0% | |
| !! | GGAAGAGGTGGTGGAATGAA+GGG | + | chr1_2:36305187-36305206 | Msa0068970:CDS | 50.0% |
| TGGAATGAAGGGAGGAAGCA+AGG | + | chr1_2:36305198-36305217 | Msa0068970:CDS | 50.0% | |
| GCTGCCAACTTAGAACGGAA+AGG | - | chr1_2:36305677-36305696 | None:intergenic | 50.0% | |
| CAGCAGCTGCCAACTTAGAA+CGG | - | chr1_2:36305682-36305701 | None:intergenic | 50.0% | |
| AGGTAAAGGACTTTAGCGCC+AGG | - | chr1_2:36305818-36305837 | None:intergenic | 50.0% | |
| GGCGCTAAAGTCCTTTACCT+AGG | + | chr1_2:36305818-36305837 | Msa0068970:CDS | 50.0% | |
| CAGAAGCAGCTCCTAGGTAA+AGG | - | chr1_2:36305832-36305851 | None:intergenic | 50.0% | |
| CTTTACCTAGGAGCTGCTTC+TGG | + | chr1_2:36305830-36305849 | Msa0068970:CDS | 50.0% | |
| TTGTTCCAGAAGCAGCTCCT+AGG | - | chr1_2:36305838-36305857 | None:intergenic | 50.0% | |
| !! | TGGGCGTGACTTGGTCAATA+TGG | + | chr1_2:36306027-36306046 | Msa0068970:CDS | 50.0% |
| TCCCGCCAAGTACAGAATGT+TGG | + | chr1_2:36306096-36306115 | Msa0068970:CDS | 50.0% | |
| TGATGTTGCTCAGCCTGATC+AGG | + | chr1_2:36306144-36306163 | Msa0068970:CDS | 50.0% | |
| TGATTCCACAGTTCCAGCTG+AGG | + | chr1_2:36307545-36307564 | Msa0068970:CDS | 50.0% | |
| CAAGCATGGTCCCTCTCAAA+TGG | - | chr1_2:36307642-36307661 | None:intergenic | 50.0% | |
| AGGGACCATGCTTGTGTTGT+TGG | + | chr1_2:36307648-36307667 | Msa0068970:CDS | 50.0% | |
| ! | GACCATGCTTGTGTTGTTGG+TGG | + | chr1_2:36307651-36307670 | Msa0068970:CDS | 50.0% |
| AGCCACCAACAACACAAGCA+TGG | - | chr1_2:36307656-36307675 | None:intergenic | 50.0% | |
| GCATATAGGGGTTAGACTCG+TGG | - | chr1_2:36307932-36307951 | None:intergenic | 50.0% | |
| ACAATGGCTCCTCCTGTTCG+AGG | + | chr1_2:36304813-36304832 | Msa0068970:exon | 55.0% | |
| TGGAGGGTTCAGAGGAGGAA+GGG | + | chr1_2:36305027-36305046 | Msa0068970:CDS | 55.0% | |
| GGTGGTGATAGAGGAGGTAG+AGG | + | chr1_2:36305049-36305068 | Msa0068970:CDS | 55.0% | |
| GGTGATAGAGGAGGTAGAGG+AGG | + | chr1_2:36305052-36305071 | Msa0068970:CDS | 55.0% | |
| GATAGAGGAGGTAGAGGAGG+TGG | + | chr1_2:36305055-36305074 | Msa0068970:CDS | 55.0% | |
| !!! | AGAGGTGGTTTTGGAGGACG+AGG | + | chr1_2:36305079-36305098 | Msa0068970:CDS | 55.0% |
| GGTACCCCTTTCAAGGCTAG+AGG | + | chr1_2:36305112-36305131 | Msa0068970:CDS | 55.0% | |
| ACCCCTTTCAAGGCTAGAGG+TGG | + | chr1_2:36305115-36305134 | Msa0068970:CDS | 55.0% | |
| !! | GCCACCTCTAGCCTTGAAAG+GGG | - | chr1_2:36305119-36305138 | None:intergenic | 55.0% |
| !! | CGCCACCTCTAGCCTTGAAA+GGG | - | chr1_2:36305120-36305139 | None:intergenic | 55.0% |
| CCTTTCAAGGCTAGAGGTGG+CGG | + | chr1_2:36305118-36305137 | Msa0068970:CDS | 55.0% | |
| !! | CGGAAGAGGTGGTGGAATGA+AGG | + | chr1_2:36305186-36305205 | Msa0068970:CDS | 55.0% |
| !! | AGAGGTGGTGGAATGAAGGG+AGG | + | chr1_2:36305190-36305209 | Msa0068970:CDS | 55.0% |
| TGAGAAGAGGGTTACCGTGC+AGG | + | chr1_2:36305321-36305340 | Msa0068970:CDS | 55.0% | |
| AAGTTGGCAGCTGCTGTCCT+TGG | + | chr1_2:36305686-36305705 | Msa0068970:CDS | 55.0% | |
| CAAGTCACGCCCACTTCGAT+GGG | - | chr1_2:36306020-36306039 | None:intergenic | 55.0% | |
| TTGCTCAGCCTGATCAGGTG+TGG | + | chr1_2:36306149-36306168 | Msa0068970:intron | 55.0% | |
| TACTGCCTCAGCTGGAACTG+TGG | - | chr1_2:36307553-36307572 | None:intergenic | 55.0% | |
| TGAGGCAGTATTCAGCGCTG+AGG | + | chr1_2:36307563-36307582 | Msa0068970:CDS | 55.0% | |
| TGTACAGGCCGTGGTGGTTC+TGG | + | chr1_2:36305004-36305023 | Msa0068970:intron | 60.0% | |
| ACCCTCCACCAGAACCACCA+CGG | - | chr1_2:36305015-36305034 | None:intergenic | 60.0% | |
| ! | GGTTCTGGTGGAGGGTTCAG+AGG | + | chr1_2:36305019-36305038 | Msa0068970:CDS | 60.0% |
| TCTGGTGGAGGGTTCAGAGG+AGG | + | chr1_2:36305022-36305041 | Msa0068970:CDS | 60.0% | |
| GTGGAGGGTTCAGAGGAGGA+AGG | + | chr1_2:36305026-36305045 | Msa0068970:CDS | 60.0% | |
| GGAGGGTTCAGAGGAGGAAG+GGG | + | chr1_2:36305028-36305047 | Msa0068970:CDS | 60.0% | |
| GGAGGAAGGGGTGGTGATAG+AGG | + | chr1_2:36305040-36305059 | Msa0068970:CDS | 60.0% | |
| GGAAGGGGTGGTGATAGAGG+AGG | + | chr1_2:36305043-36305062 | Msa0068970:CDS | 60.0% | |
| ! | GGAGGTGGGAGAGGTGGTTT+TGG | + | chr1_2:36305070-36305089 | Msa0068970:CDS | 60.0% |
| !!! | GGTGGGAGAGGTGGTTTTGG+AGG | + | chr1_2:36305073-36305092 | Msa0068970:CDS | 60.0% |
| !!! | GGTGGTTTTGGAGGACGAGG+AGG | + | chr1_2:36305082-36305101 | Msa0068970:CDS | 60.0% |
| GGAGGACGAGGAGGAGATAG+AGG | + | chr1_2:36305091-36305110 | Msa0068970:CDS | 60.0% | |
| !! | CCGCCACCTCTAGCCTTGAA+AGG | - | chr1_2:36305121-36305140 | None:intergenic | 60.0% |
| ! | AAGGCTAGAGGTGGCGGTAG+AGG | + | chr1_2:36305124-36305143 | Msa0068970:CDS | 60.0% |
| TTGGCAGCTGCTGTCCTTGG+TGG | + | chr1_2:36305689-36305708 | Msa0068970:CDS | 60.0% | |
| CCAAGTCACGCCCACTTCGA+TGG | - | chr1_2:36306021-36306040 | None:intergenic | 60.0% | |
| CCATCGAAGTGGGCGTGACT+TGG | + | chr1_2:36306018-36306037 | Msa0068970:CDS | 60.0% | |
| GCGCTGAATACTGCCTCAGC+TGG | - | chr1_2:36307561-36307580 | None:intergenic | 60.0% | |
| !! | ACAGGCCGTGGTGGTTCTGG+TGG | + | chr1_2:36305007-36305026 | Msa0068970:intron | 65.0% |
| !! | GCCGTGGTGGTTCTGGTGGA+GGG | + | chr1_2:36305011-36305030 | Msa0068970:CDS | 65.0% |
| GGGTTCAGAGGAGGAAGGGG+TGG | + | chr1_2:36305031-36305050 | Msa0068970:CDS | 65.0% | |
| GGAGGTAGAGGAGGTGGGAG+AGG | + | chr1_2:36305061-36305080 | Msa0068970:CDS | 65.0% | |
| GGTAGAGGAGGTGGGAGAGG+TGG | + | chr1_2:36305064-36305083 | Msa0068970:CDS | 65.0% | |
| ! | GCTAGAGGTGGCGGTAGAGG+CGG | + | chr1_2:36305127-36305146 | Msa0068970:CDS | 65.0% |
| CACCACCTCTTCCGCCACCA+CGG | - | chr1_2:36305180-36305199 | None:intergenic | 65.0% | |
| !! | GGCCGTGGTGGTTCTGGTGG+AGG | + | chr1_2:36305010-36305029 | Msa0068970:intron | 70.0% |
| ! | AGAGGTGGCGGTAGAGGCGG+AGG | + | chr1_2:36305130-36305149 | Msa0068970:CDS | 70.0% |
| GGTAGAGGCGGAGGAGGCAG+AGG | + | chr1_2:36305139-36305158 | Msa0068970:CDS | 70.0% | |
| AGAGGCGGAGGAGGCAGAGG+AGG | + | chr1_2:36305142-36305161 | Msa0068970:CDS | 70.0% | |
| GGAGGAGGCAGAGGAGGACG+TGG | + | chr1_2:36305148-36305167 | Msa0068970:CDS | 70.0% | |
| GGAGGCAGAGGAGGACGTGG+AGG | + | chr1_2:36305151-36305170 | Msa0068970:CDS | 70.0% | |
| GGCAGAGGAGGACGTGGAGG+AGG | + | chr1_2:36305154-36305173 | Msa0068970:CDS | 70.0% | |
| !! | CGTGGTGGCGGAAGAGGTGG+TGG | + | chr1_2:36305178-36305197 | Msa0068970:CDS | 70.0% |
| ! | GGTGGCGGTAGAGGCGGAGG+AGG | + | chr1_2:36305133-36305152 | Msa0068970:CDS | 75.0% |
| GGAGGACGTGGAGGAGGCCG+TGG | + | chr1_2:36305160-36305179 | Msa0068970:CDS | 75.0% | |
| GGACGTGGAGGAGGCCGTGG+TGG | + | chr1_2:36305163-36305182 | Msa0068970:CDS | 75.0% | |
| CGTGGAGGAGGCCGTGGTGG+CGG | + | chr1_2:36305166-36305185 | Msa0068970:CDS | 75.0% | |
| !! | GGAGGCCGTGGTGGCGGAAG+AGG | + | chr1_2:36305172-36305191 | Msa0068970:CDS | 75.0% |
| !! | GGCCGTGGTGGCGGAAGAGG+TGG | + | chr1_2:36305175-36305194 | Msa0068970:CDS | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_2 | gene | 36304735 | 36307973 | 36304735 | ID=Msa0068970;Name=Msa0068970 |
| chr1_2 | mRNA | 36304735 | 36307973 | 36304735 | ID=Msa0068970-mRNA-1;Parent=Msa0068970;Name=Msa0068970-mRNA-1;_AED=0.10;_eAED=0.10;_QI=81|1|1|1|1|1|7|263|315 |
| chr1_2 | exon | 36304735 | 36304834 | 36304735 | ID=Msa0068970-mRNA-1:exon:11619;Parent=Msa0068970-mRNA-1 |
| chr1_2 | exon | 36305011 | 36305342 | 36305011 | ID=Msa0068970-mRNA-1:exon:11620;Parent=Msa0068970-mRNA-1 |
| chr1_2 | exon | 36305635 | 36305730 | 36305635 | ID=Msa0068970-mRNA-1:exon:11621;Parent=Msa0068970-mRNA-1 |
| chr1_2 | exon | 36305812 | 36305889 | 36305812 | ID=Msa0068970-mRNA-1:exon:11622;Parent=Msa0068970-mRNA-1 |
| chr1_2 | exon | 36305989 | 36306165 | 36305989 | ID=Msa0068970-mRNA-1:exon:11623;Parent=Msa0068970-mRNA-1 |
| chr1_2 | exon | 36307141 | 36307209 | 36307141 | ID=Msa0068970-mRNA-1:exon:11624;Parent=Msa0068970-mRNA-1 |
| chr1_2 | exon | 36307534 | 36307973 | 36307534 | ID=Msa0068970-mRNA-1:exon:11625;Parent=Msa0068970-mRNA-1 |
| chr1_2 | five_prime_UTR | 36304735 | 36304815 | 36304735 | ID=Msa0068970-mRNA-1:five_prime_utr;Parent=Msa0068970-mRNA-1 |
| chr1_2 | CDS | 36304816 | 36304834 | 36304816 | ID=Msa0068970-mRNA-1:cds;Parent=Msa0068970-mRNA-1 |
| chr1_2 | CDS | 36305011 | 36305342 | 36305011 | ID=Msa0068970-mRNA-1:cds;Parent=Msa0068970-mRNA-1 |
| chr1_2 | CDS | 36305635 | 36305730 | 36305635 | ID=Msa0068970-mRNA-1:cds;Parent=Msa0068970-mRNA-1 |
| chr1_2 | CDS | 36305812 | 36305889 | 36305812 | ID=Msa0068970-mRNA-1:cds;Parent=Msa0068970-mRNA-1 |
| chr1_2 | CDS | 36305989 | 36306165 | 36305989 | ID=Msa0068970-mRNA-1:cds;Parent=Msa0068970-mRNA-1 |
| chr1_2 | CDS | 36307141 | 36307209 | 36307141 | ID=Msa0068970-mRNA-1:cds;Parent=Msa0068970-mRNA-1 |
| chr1_2 | CDS | 36307534 | 36307710 | 36307534 | ID=Msa0068970-mRNA-1:cds;Parent=Msa0068970-mRNA-1 |
| chr1_2 | three_prime_UTR | 36307711 | 36307973 | 36307711 | ID=Msa0068970-mRNA-1:three_prime_utr;Parent=Msa0068970-mRNA-1 |
| Gene Sequence |
| Protein sequence |
