Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1198540 | XP_013446150.2 | 93.973 | 448 | 16 | 1 | 1 | 437 | 1 | 448 | 0.0 | 884 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1198540 | A0A396GKI9 | 93.973 | 448 | 16 | 1 | 1 | 437 | 1 | 448 | 0.0 | 884 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0034210 | Msa1198540 | 0.810447 | 1.147437e-50 | -8.615850e-47 |
| Msa0050660 | Msa1198540 | 0.800944 | 1.136358e-48 | -8.615850e-47 |
| Msa0050700 | Msa1198540 | 0.802420 | 5.657397e-49 | -8.615850e-47 |
| Msa0050790 | Msa1198540 | 0.810603 | 1.061700e-50 | -8.615850e-47 |
| Msa0071860 | Msa1198540 | 0.807785 | 4.266584e-50 | -8.615850e-47 |
| Msa0094780 | Msa1198540 | 0.813261 | 2.799209e-51 | -8.615850e-47 |
| Msa0108880 | Msa1198540 | 0.803239 | 3.833698e-49 | -8.615850e-47 |
| Msa0675330 | Msa1198540 | 0.821357 | 4.214878e-53 | -8.615850e-47 |
| Msa0824450 | Msa1198540 | 0.808413 | 3.135431e-50 | -8.615850e-47 |
| Msa0128310 | Msa1198540 | 0.824493 | 7.832904e-54 | -8.615850e-47 |
| Msa0136650 | Msa1198540 | 0.808346 | 3.240289e-50 | -8.615850e-47 |
| Msa0140280 | Msa1198540 | 0.812895 | 3.368097e-51 | -8.615850e-47 |
| Msa0174440 | Msa1198540 | 0.811761 | 5.956505e-51 | -8.615850e-47 |
| Msa0174450 | Msa1198540 | 0.805537 | 1.272282e-49 | -8.615850e-47 |
| Msa0200050 | Msa1198540 | 0.811740 | 6.019186e-51 | -8.615850e-47 |
| Msa0369790 | Msa1198540 | 0.814650 | 1.382866e-51 | -8.615850e-47 |
| Msa0380620 | Msa1198540 | 0.807125 | 5.889978e-50 | -8.615850e-47 |
| Msa0380670 | Msa1198540 | 0.803830 | 2.891265e-49 | -8.615850e-47 |
| Msa0405680 | Msa1198540 | 0.805609 | 1.229249e-49 | -8.615850e-47 |
| Msa0430260 | Msa1198540 | 0.811687 | 6.181121e-51 | -8.615850e-47 |
| Msa0430300 | Msa1198540 | 0.811298 | 7.509911e-51 | -8.615850e-47 |
| Msa0460550 | Msa1198540 | 0.800490 | 1.406184e-48 | -8.615850e-47 |
| Msa0464000 | Msa1198540 | 0.813382 | 2.633321e-51 | -8.615850e-47 |
| Msa0472950 | Msa1198540 | 0.817950 | 2.527685e-52 | -8.615850e-47 |
| Msa1042160 | Msa1198540 | 0.827984 | 1.156363e-54 | -8.615850e-47 |
| Msa1042190 | Msa1198540 | 0.827615 | 1.418355e-54 | -8.615850e-47 |
| Msa0280790 | Msa1198540 | 0.800493 | 1.404417e-48 | -8.615850e-47 |
| Msa1123210 | Msa1198540 | 0.815628 | 8.387905e-52 | -8.615850e-47 |
| Msa1167470 | Msa1198540 | 0.822228 | 2.649903e-53 | -8.615850e-47 |
| Msa1192570 | Msa1198540 | 0.802568 | 5.273733e-49 | -8.615850e-47 |
| Msa1198540 | Msa1208950 | 0.802118 | 6.529593e-49 | -8.615850e-47 |
| Msa1198540 | Msa1223570 | 0.804941 | 1.695892e-49 | -8.615850e-47 |
| Msa1198540 | Msa1292840 | 0.923710 | 1.853401e-89 | -8.615850e-47 |
| Msa1198540 | Msa1393780 | 0.807288 | 5.438327e-50 | -8.615850e-47 |
| Msa1198540 | Msa1440630 | 0.808629 | 2.819820e-50 | -8.615850e-47 |
| Msa1198540 | Msa1452140 | 0.808461 | 3.062418e-50 | -8.615850e-47 |
| Msa0500380 | Msa1198540 | 0.809771 | 1.604503e-50 | -8.615850e-47 |
| Msa0509550 | Msa1198540 | 0.823111 | 1.651806e-53 | -8.615850e-47 |
| Msa0517250 | Msa1198540 | 0.800948 | 1.134180e-48 | -8.615850e-47 |
| Msa0528570 | Msa1198540 | 0.800509 | 1.393941e-48 | -8.615850e-47 |
| Msa0541300 | Msa1198540 | 0.826022 | 3.406602e-54 | -8.615850e-47 |
| Msa0541310 | Msa1198540 | 0.821338 | 4.258947e-53 | -8.615850e-47 |
| Msa0585020 | Msa1198540 | 0.812576 | 3.954906e-51 | -8.615850e-47 |
| Msa0597270 | Msa1198540 | 0.836672 | 8.159976e-57 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1198540 | MtrunA17_Chr8g0368161 | 93.973 | 448 | 16 | 1 | 1 | 437 | 1 | 448 | 0.0 | 884 |
| Msa1198540 | MtrunA17_Chr5g0413131 | 67.483 | 449 | 113 | 8 | 20 | 437 | 17 | 463 | 0.0 | 602 |
| Msa1198540 | MtrunA17_Chr4g0058771 | 59.408 | 473 | 147 | 9 | 8 | 437 | 11 | 481 | 0.0 | 565 |
| Msa1198540 | MtrunA17_Chr3g0117271 | 66.925 | 387 | 114 | 4 | 63 | 437 | 112 | 496 | 0.0 | 548 |
| Msa1198540 | MtrunA17_Chr8g0368241 | 62.802 | 414 | 140 | 2 | 38 | 437 | 1 | 414 | 0.0 | 541 |
| Msa1198540 | MtrunA17_Chr2g0314461 | 65.816 | 392 | 120 | 5 | 57 | 437 | 18 | 406 | 0.0 | 528 |
| Msa1198540 | MtrunA17_Chr2g0314451 | 63.210 | 405 | 131 | 6 | 48 | 437 | 4 | 405 | 0.0 | 513 |
| Msa1198540 | MtrunA17_Chr2g0314471 | 61.125 | 409 | 141 | 6 | 44 | 437 | 1 | 406 | 1.47e-179 | 507 |
| Msa1198540 | MtrunA17_Chr3g0129891 | 55.504 | 427 | 130 | 6 | 15 | 436 | 8 | 379 | 3.25e-161 | 459 |
| Msa1198540 | MtrunA17_Chr8g0368291 | 53.957 | 417 | 163 | 6 | 38 | 437 | 1 | 405 | 1.17e-154 | 444 |
| Msa1198540 | MtrunA17_Chr7g0274951 | 52.000 | 425 | 167 | 6 | 49 | 436 | 15 | 439 | 1.24e-154 | 445 |
| Msa1198540 | MtrunA17_Chr1g0189961 | 49.652 | 431 | 172 | 6 | 51 | 437 | 22 | 451 | 6.88e-149 | 431 |
| Msa1198540 | MtrunA17_Chr8g0380511 | 51.179 | 424 | 160 | 7 | 45 | 436 | 7 | 415 | 3.74e-148 | 427 |
| Msa1198540 | MtrunA17_Chr2g0309251 | 51.295 | 386 | 156 | 4 | 83 | 437 | 42 | 426 | 8.08e-144 | 417 |
| Msa1198540 | MtrunA17_Chr8g0368341 | 56.342 | 339 | 137 | 4 | 103 | 437 | 4 | 335 | 3.75e-133 | 386 |
| Msa1198540 | MtrunA17_Chr8g0368201 | 58.385 | 322 | 105 | 4 | 143 | 437 | 1 | 320 | 4.12e-131 | 380 |
| Msa1198540 | MtrunA17_Chr8g0368221 | 58.363 | 281 | 88 | 2 | 38 | 312 | 1 | 258 | 2.21e-112 | 331 |
| Msa1198540 | MtrunA17_Chr2g0326371 | 55.312 | 320 | 118 | 8 | 132 | 437 | 52 | 360 | 1.88e-107 | 322 |
| Msa1198540 | MtrunA17_Chr8g0368351 | 58.300 | 247 | 85 | 4 | 1 | 244 | 3 | 234 | 2.09e-95 | 287 |
| Msa1198540 | MtrunA17_Chr8g0368181 | 70.312 | 192 | 56 | 1 | 246 | 437 | 3 | 193 | 3.00e-95 | 284 |
| Msa1198540 | MtrunA17_Chr6g0453411 | 39.257 | 377 | 179 | 10 | 102 | 437 | 8 | 375 | 1.33e-83 | 261 |
| Msa1198540 | MtrunA17_Chr3g0135381 | 37.692 | 390 | 205 | 7 | 79 | 432 | 45 | 432 | 7.35e-83 | 262 |
| Msa1198540 | MtrunA17_Chr3g0135371 | 36.111 | 432 | 227 | 11 | 40 | 437 | 19 | 435 | 8.21e-83 | 261 |
| Msa1198540 | MtrunA17_Chr8g0368281 | 57.979 | 188 | 78 | 1 | 250 | 436 | 7 | 194 | 2.09e-75 | 234 |
| Msa1198540 | MtrunA17_Chr8g0368361 | 55.670 | 194 | 83 | 2 | 246 | 437 | 3 | 195 | 2.95e-75 | 233 |
| Msa1198540 | MtrunA17_Chr8g0368331 | 42.701 | 274 | 120 | 3 | 201 | 437 | 13 | 286 | 5.66e-73 | 231 |
| Msa1198540 | MtrunA17_Chr3g0135401 | 38.125 | 320 | 156 | 7 | 150 | 433 | 33 | 346 | 4.58e-65 | 212 |
| Msa1198540 | MtrunA17_Chr1g0151871 | 38.255 | 298 | 163 | 5 | 151 | 437 | 40 | 327 | 2.02e-64 | 210 |
| Msa1198540 | MtrunA17_Chr8g0368231 | 72.000 | 125 | 35 | 0 | 313 | 437 | 8 | 132 | 4.00e-60 | 192 |
| Msa1198540 | MtrunA17_Chr8g0368171 | 49.533 | 214 | 79 | 6 | 38 | 246 | 1 | 190 | 5.44e-59 | 192 |
| Msa1198540 | MtrunA17_Chr8g0368271 | 58.824 | 153 | 60 | 1 | 38 | 187 | 1 | 153 | 1.28e-56 | 185 |
| Msa1198540 | MtrunA17_Chr8g0368261 | 63.846 | 130 | 45 | 2 | 309 | 437 | 1 | 129 | 3.93e-53 | 174 |
| Msa1198540 | MtrunA17_Chr8g0368321 | 58.940 | 151 | 52 | 3 | 38 | 187 | 1 | 142 | 1.10e-51 | 172 |
| Msa1198540 | MtrunA17_Chr8g0368381 | 61.261 | 111 | 43 | 0 | 246 | 356 | 3 | 113 | 1.03e-45 | 154 |
| Msa1198540 | MtrunA17_Chr3g0135441 | 35.802 | 243 | 140 | 5 | 198 | 437 | 3 | 232 | 2.51e-45 | 157 |
| Msa1198540 | MtrunA17_Chr3g0135431 | 37.333 | 225 | 97 | 6 | 82 | 267 | 41 | 260 | 1.01e-38 | 144 |
| Msa1198540 | MtrunA17_Chr3g0138811 | 28.329 | 353 | 216 | 13 | 99 | 433 | 53 | 386 | 3.49e-36 | 137 |
| Msa1198540 | MtrunA17_Chr8g0339871 | 35.983 | 239 | 128 | 9 | 213 | 431 | 4 | 237 | 6.85e-34 | 127 |
| Msa1198540 | MtrunA17_Chr2g0302691 | 29.014 | 355 | 206 | 11 | 100 | 431 | 37 | 368 | 3.71e-33 | 128 |
| Msa1198540 | MtrunA17_Chr8g0391201 | 34.025 | 241 | 130 | 9 | 212 | 431 | 3 | 235 | 4.13e-31 | 119 |
| Msa1198540 | MtrunA17_Chr5g0445181 | 28.446 | 341 | 168 | 13 | 46 | 372 | 19 | 297 | 3.65e-27 | 110 |
| Msa1198540 | MtrunA17_Chr3g0135451 | 42.063 | 126 | 52 | 4 | 82 | 187 | 35 | 159 | 1.64e-22 | 94.7 |
| Msa1198540 | MtrunA17_Chr8g0353941 | 35.106 | 188 | 112 | 6 | 250 | 433 | 1 | 182 | 8.35e-22 | 92.4 |
| Msa1198540 | MtrunA17_Chr2g0302651 | 32.850 | 207 | 119 | 7 | 234 | 431 | 1 | 196 | 9.06e-22 | 92.8 |
| Msa1198540 | MtrunA17_Chr8g0353971 | 35.673 | 171 | 102 | 5 | 265 | 431 | 4 | 170 | 1.03e-21 | 92.0 |
| Msa1198540 | MtrunA17_Chr5g0434771 | 38.272 | 162 | 92 | 6 | 255 | 414 | 9 | 164 | 2.66e-21 | 91.3 |
| Msa1198540 | MtrunA17_Chr8g0353931 | 28.571 | 203 | 122 | 6 | 51 | 246 | 3 | 189 | 1.53e-18 | 84.0 |
| Msa1198540 | MtrunA17_Chr5g0426971 | 27.419 | 248 | 164 | 5 | 186 | 431 | 23 | 256 | 8.73e-18 | 82.8 |
| Msa1198540 | MtrunA17_Chr8g0368191 | 55.714 | 70 | 27 | 2 | 51 | 117 | 9 | 77 | 4.96e-17 | 77.4 |
| Msa1198540 | MtrunA17_Chr8g0353961 | 34.951 | 103 | 64 | 2 | 86 | 185 | 33 | 135 | 1.37e-14 | 71.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1198540 | AT1G10750.1 | 70.942 | 382 | 99 | 2 | 67 | 437 | 87 | 467 | 0.0 | 584 |
| Msa1198540 | AT1G23340.2 | 65.757 | 403 | 125 | 3 | 47 | 437 | 8 | 409 | 0.0 | 559 |
| Msa1198540 | AT1G23340.1 | 65.757 | 403 | 125 | 3 | 47 | 437 | 8 | 409 | 0.0 | 559 |
| Msa1198540 | AT1G70550.1 | 68.074 | 379 | 109 | 2 | 70 | 437 | 88 | 465 | 0.0 | 553 |
| Msa1198540 | AT5G50150.1 | 67.016 | 382 | 112 | 4 | 69 | 437 | 40 | 420 | 0.0 | 541 |
| Msa1198540 | AT1G55360.1 | 53.627 | 386 | 149 | 6 | 81 | 437 | 38 | 422 | 6.76e-148 | 427 |
| Msa1198540 | AT3G13510.1 | 51.332 | 413 | 159 | 8 | 53 | 437 | 21 | 419 | 1.86e-147 | 426 |
| Msa1198540 | AT5G18460.1 | 53.646 | 384 | 141 | 5 | 86 | 436 | 50 | 429 | 3.54e-147 | 426 |
| Msa1198540 | AT5G56530.2 | 51.074 | 419 | 152 | 8 | 51 | 436 | 21 | 419 | 8.31e-143 | 414 |
| Msa1198540 | AT5G56530.1 | 51.074 | 419 | 152 | 8 | 51 | 436 | 21 | 419 | 8.31e-143 | 414 |
| Msa1198540 | AT2G44210.1 | 49.043 | 418 | 172 | 8 | 51 | 437 | 8 | 415 | 1.51e-137 | 401 |
| Msa1198540 | AT2G44210.2 | 45.982 | 448 | 171 | 9 | 51 | 437 | 8 | 445 | 7.48e-132 | 387 |
| Msa1198540 | AT1G23340.3 | 63.309 | 278 | 89 | 3 | 47 | 312 | 8 | 284 | 9.71e-125 | 364 |
| Msa1198540 | AT2G44220.1 | 45.499 | 411 | 186 | 9 | 51 | 437 | 7 | 403 | 1.97e-123 | 364 |
| Msa1198540 | AT2G44240.1 | 47.230 | 379 | 180 | 7 | 77 | 437 | 26 | 402 | 2.26e-115 | 344 |
| Msa1198540 | AT2G17750.1 | 40.488 | 410 | 208 | 10 | 47 | 436 | 2 | 395 | 1.44e-105 | 318 |
| Msa1198540 | AT3G48230.1 | 45.333 | 375 | 182 | 8 | 82 | 437 | 3 | 373 | 3.80e-102 | 309 |
| Msa1198540 | AT2G44250.1 | 43.765 | 409 | 198 | 11 | 51 | 436 | 9 | 408 | 4.13e-100 | 305 |
| Msa1198540 | AT2G19360.1 | 40.046 | 432 | 201 | 10 | 47 | 436 | 10 | 425 | 7.34e-100 | 305 |
| Msa1198540 | AT5G19170.1 | 43.539 | 356 | 166 | 7 | 98 | 431 | 23 | 365 | 1.54e-94 | 290 |
| Msa1198540 | AT1G70550.2 | 64.390 | 205 | 61 | 2 | 70 | 263 | 88 | 291 | 6.69e-91 | 277 |
| Msa1198540 | AT1G10750.2 | 68.156 | 179 | 56 | 1 | 67 | 245 | 87 | 264 | 5.78e-86 | 267 |
| Msa1198540 | AT2G44250.2 | 46.906 | 307 | 139 | 8 | 151 | 436 | 22 | 325 | 4.09e-79 | 248 |
| Msa1198540 | AT5G25950.1 | 37.097 | 434 | 219 | 10 | 43 | 437 | 14 | 432 | 2.29e-76 | 244 |
| Msa1198540 | AT5G25960.1 | 36.364 | 407 | 191 | 8 | 49 | 437 | 1 | 357 | 3.41e-68 | 221 |
| Msa1198540 | AT2G20170.1 | 35.366 | 410 | 219 | 15 | 47 | 431 | 8 | 396 | 6.05e-68 | 222 |
| Msa1198540 | AT2G20170.2 | 35.366 | 410 | 219 | 15 | 47 | 431 | 8 | 396 | 6.05e-68 | 222 |
| Msa1198540 | AT2G20170.3 | 34.500 | 400 | 219 | 14 | 47 | 431 | 8 | 379 | 9.17e-65 | 213 |
| Msa1198540 | AT4G23370.1 | 33.600 | 375 | 217 | 11 | 83 | 431 | 33 | 401 | 2.01e-62 | 207 |
| Msa1198540 | AT4G23390.1 | 36.164 | 365 | 202 | 12 | 90 | 431 | 41 | 397 | 3.19e-62 | 207 |
| Msa1198540 | AT4G23380.1 | 32.360 | 411 | 234 | 14 | 46 | 431 | 7 | 398 | 8.55e-57 | 192 |
| Msa1198540 | AT4G23365.1 | 31.536 | 371 | 224 | 11 | 83 | 431 | 36 | 398 | 4.22e-54 | 186 |
| Msa1198540 | AT4G23350.1 | 30.769 | 377 | 221 | 11 | 83 | 431 | 36 | 400 | 1.62e-52 | 181 |
| Msa1198540 | AT4G23355.1 | 31.551 | 374 | 220 | 11 | 83 | 431 | 36 | 398 | 2.20e-52 | 181 |
| Msa1198540 | AT4G23360.1 | 31.467 | 375 | 220 | 12 | 83 | 431 | 36 | 399 | 3.69e-51 | 178 |
| Msa1198540 | AT2G35250.1 | 32.353 | 340 | 193 | 10 | 107 | 433 | 24 | 339 | 1.29e-46 | 164 |
| Msa1198540 | AT1G10190.1 | 31.127 | 408 | 237 | 18 | 52 | 431 | 3 | 394 | 6.13e-44 | 158 |
| Msa1198540 | AT4G17505.1 | 29.379 | 354 | 186 | 14 | 98 | 437 | 18 | 321 | 1.96e-40 | 147 |
| Msa1198540 | AT4G15050.1 | 30.914 | 372 | 216 | 17 | 86 | 431 | 38 | 394 | 3.33e-40 | 148 |
| Msa1198540 | AT2G24950.1 | 28.607 | 402 | 245 | 17 | 51 | 431 | 29 | 409 | 9.32e-36 | 136 |
| Msa1198540 | AT4G15053.1 | 29.412 | 425 | 245 | 20 | 38 | 431 | 1 | 401 | 2.67e-35 | 135 |
| Msa1198540 | AT2G27320.1 | 32.119 | 302 | 165 | 9 | 109 | 396 | 30 | 305 | 8.29e-35 | 132 |
| Msa1198540 | AT4G10220.1 | 27.163 | 416 | 253 | 15 | 41 | 431 | 8 | 398 | 9.50e-34 | 130 |
| Msa1198540 | AT5G46810.1 | 27.794 | 349 | 215 | 12 | 110 | 431 | 11 | 349 | 2.12e-30 | 120 |
| Msa1198540 | AT4G23373.1 | 32.258 | 248 | 129 | 8 | 47 | 284 | 7 | 225 | 2.38e-30 | 119 |
| Msa1198540 | AT5G46820.1 | 27.966 | 354 | 218 | 13 | 101 | 431 | 8 | 347 | 1.93e-29 | 118 |
| Msa1198540 | AT5G05030.1 | 28.134 | 359 | 218 | 12 | 94 | 433 | 22 | 359 | 3.76e-28 | 114 |
| Msa1198540 | AT5G60380.1 | 27.778 | 342 | 209 | 13 | 110 | 431 | 44 | 367 | 1.33e-26 | 110 |
| Msa1198540 | AT5G25410.1 | 26.184 | 359 | 221 | 13 | 94 | 431 | 28 | 363 | 4.17e-26 | 108 |
| Msa1198540 | AT4G10210.1 | 26.471 | 408 | 245 | 16 | 38 | 416 | 5 | 386 | 5.98e-26 | 108 |
| Msa1198540 | AT5G46200.1 | 26.440 | 382 | 214 | 15 | 110 | 431 | 31 | 405 | 3.70e-25 | 107 |
| Msa1198540 | AT4G23080.1 | 26.950 | 423 | 253 | 20 | 42 | 433 | 9 | 406 | 3.26e-23 | 101 |
| Msa1198540 | AT4G17860.1 | 28.409 | 352 | 193 | 18 | 110 | 431 | 29 | 351 | 5.26e-22 | 97.1 |
| Msa1198540 | AT5G11660.1 | 29.795 | 292 | 174 | 11 | 160 | 433 | 26 | 304 | 7.34e-22 | 95.9 |
| Msa1198540 | AT5G25415.1 | 30.864 | 243 | 138 | 8 | 212 | 433 | 99 | 332 | 8.03e-22 | 96.3 |
| Msa1198540 | AT2G38255.1 | 31.579 | 209 | 100 | 6 | 110 | 301 | 14 | 196 | 8.61e-22 | 93.6 |
| Msa1198540 | AT5G36680.1 | 26.821 | 302 | 176 | 13 | 159 | 436 | 51 | 331 | 7.68e-17 | 81.6 |
| Msa1198540 | AT5G36770.1 | 26.821 | 302 | 176 | 13 | 159 | 436 | 51 | 331 | 7.68e-17 | 81.6 |
| Msa1198540 | AT2G03930.2 | 44.792 | 96 | 39 | 3 | 197 | 278 | 38 | 133 | 1.83e-15 | 74.3 |
| Msa1198540 | AT5G37520.1 | 29.412 | 221 | 126 | 12 | 218 | 432 | 2 | 198 | 3.23e-15 | 74.3 |
| Msa1198540 | AT5G04937.1 | 28.497 | 193 | 111 | 8 | 246 | 431 | 26 | 198 | 1.80e-14 | 72.4 |
Find 119 sgRNAs with CRISPR-Local
Find 275 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AATATTCTTCTTTCATTTCT+TGG | 0.122119 | 8_1:-50164430 | Msa1198540:three_prime_UTR |
| TCTCTCTCTGAACATATTTC+AGG | 0.137021 | 8_1:+50169294 | None:intergenic |
| ATTTGAGTGTTCTTATATTT+TGG | 0.152354 | 8_1:+50169137 | None:intergenic |
| ACCCTAGATTCTTCACTTAT+TGG | 0.171239 | 8_1:-50166620 | Msa1198540:CDS |
| ATCCCTATTCACACACTTAA+AGG | 0.191236 | 8_1:-50164795 | Msa1198540:CDS |
| TCTTGTATATTATAACAATT+TGG | 0.235227 | 8_1:+50164575 | None:intergenic |
| GGCTTCAAAGGCTTTGAAAA+TGG | 0.257111 | 8_1:-50169253 | Msa1198540:five_prime_UTR |
| TCTTCTTTCATTTCTTGGTT+GGG | 0.261381 | 8_1:-50164425 | Msa1198540:three_prime_UTR |
| ATGAAGAGTTTCACAAGTTT+AGG | 0.287405 | 8_1:-50168941 | Msa1198540:CDS |
| TCTCCAACTTCTACATATAA+TGG | 0.288121 | 8_1:-50166371 | Msa1198540:CDS |
| AATTCAGCTTGTCTCAAATA+TGG | 0.288451 | 8_1:-50167259 | Msa1198540:CDS |
| CCCATTTGCTTATGCTCTCT+TGG | 0.302334 | 8_1:+50168561 | None:intergenic |
| TTGGTAGAAAAGTTTGATTT+TGG | 0.315468 | 8_1:+50168964 | None:intergenic |
| CAAAATGTCCACTACCCATT+TGG | 0.328159 | 8_1:+50164702 | None:intergenic |
| TTCTTCTTTCATTTCTTGGT+TGG | 0.328319 | 8_1:-50164426 | Msa1198540:three_prime_UTR |
| AGCCACCAATTCCCATGCTT+TGG | 0.330284 | 8_1:+50164857 | None:intergenic |
| GGGAATTGGTGGCTTGAATA+TGG | 0.338331 | 8_1:-50164848 | Msa1198540:CDS |
| TGGATCATCTCTGGTTCATT+TGG | 0.338622 | 8_1:-50167239 | Msa1198540:CDS |
| GCTTGCTCTATTAACACATT+TGG | 0.344553 | 8_1:-50168438 | Msa1198540:CDS |
| AGTGCAACAATGGTTCAATT+TGG | 0.351443 | 8_1:-50164770 | Msa1198540:CDS |
| TATCCTTTAAGTGTGTGAAT+AGG | 0.369475 | 8_1:+50164792 | None:intergenic |
| TTAGCTACAACATTGAGATT+TGG | 0.370876 | 8_1:+50164602 | None:intergenic |
| ATACATAATTATAATTATAT+AGG | 0.371324 | 8_1:-50164471 | Msa1198540:three_prime_UTR |
| ATACAAGAAGGAACTAATAA+TGG | 0.376108 | 8_1:-50164560 | Msa1198540:CDS |
| TGCTACAATTTACTTTGCTC+TGG | 0.378764 | 8_1:-50166437 | Msa1198540:CDS |
| GTCCAATAAGTGAAGAATCT+AGG | 0.380593 | 8_1:+50166618 | None:intergenic |
| CTCTCTCTGAACATATTTCA+GGG | 0.384182 | 8_1:+50169295 | None:intergenic |
| ATCCTTTAAGTGTGTGAATA+GGG | 0.384997 | 8_1:+50164793 | None:intergenic |
| GTCTCACACTTCTACCCAAA+TGG | 0.386568 | 8_1:-50164717 | Msa1198540:CDS |
| ACTAGCAGTAATATTGCAAT+TGG | 0.395249 | 8_1:-50166404 | Msa1198540:CDS |
| CTTCTTTCATTTCTTGGTTG+GGG | 0.396638 | 8_1:-50164424 | Msa1198540:three_prime_UTR |
| TTGATATTAGCTTAATGATC+TGG | 0.397300 | 8_1:-50166340 | Msa1198540:CDS |
| TTAGATTGTCTTACAAATAC+TGG | 0.397633 | 8_1:-50169219 | Msa1198540:five_prime_UTR |
| ACTGATGCATATCAAGGAAC+TGG | 0.402596 | 8_1:-50166461 | Msa1198540:CDS |
| AACTTGTGAAACTCTTCATT+TGG | 0.403131 | 8_1:+50168945 | None:intergenic |
| ATAGTGAATACAATGTCAAC+AGG | 0.406411 | 8_1:-50164740 | Msa1198540:CDS |
| CAGGTCAGCCCAGAGCTCTA+TGG | 0.408690 | 8_1:-50166651 | Msa1198540:CDS |
| TATGGATCTGGAAACTTGAT+TGG | 0.410366 | 8_1:-50164830 | Msa1198540:CDS |
| TCATTAAGCTAATATCAAAT+TGG | 0.410645 | 8_1:+50166345 | None:intergenic |
| CTGGAAACTTGATTGGGTAT+TGG | 0.411401 | 8_1:-50164823 | Msa1198540:CDS |
| TTTCAATTGTGGAGTTTCTC+AGG | 0.412909 | 8_1:-50168522 | Msa1198540:CDS |
| AAAATGTCCACTACCCATTT+GGG | 0.415939 | 8_1:+50164703 | None:intergenic |
| CTAATCGGAATCGTTCCTTC+TGG | 0.418990 | 8_1:+50168489 | None:intergenic |
| TGAGACAAGCTGAATTCATA+TGG | 0.421304 | 8_1:+50167266 | None:intergenic |
| ACCAAGAGAGCATAAGCAAA+TGG | 0.428963 | 8_1:-50168562 | Msa1198540:CDS |
| CATATGGACTTTCCACTTGT+GGG | 0.431251 | 8_1:+50167282 | None:intergenic |
| GCCTGCTGTTAAGACAATTC+AGG | 0.432132 | 8_1:-50168883 | Msa1198540:intron |
| GGAGAAGAAAATGAAGGAGG+AGG | 0.445382 | 8_1:+50169030 | None:intergenic |
| TAGCTATCCCCATAGAGCTC+TGG | 0.454983 | 8_1:+50166642 | None:intergenic |
| AAAATTGAAACGTGTTAGAA+TGG | 0.456346 | 8_1:-50168412 | Msa1198540:CDS |
| TTTATTATGGTGGTCCTGGC+AGG | 0.459542 | 8_1:-50164523 | Msa1198540:CDS |
| AAGGCTTTGAAAATGGTGAA+TGG | 0.465731 | 8_1:-50169246 | Msa1198540:five_prime_UTR |
| CCTCCATTATATGTAGAAGT+TGG | 0.467832 | 8_1:+50166368 | None:intergenic |
| AAGAAGGAACTAATAATGGC+TGG | 0.470251 | 8_1:-50164556 | Msa1198540:CDS |
| TGAAGGAGGAGGGAGATGAC+TGG | 0.470901 | 8_1:+50169041 | None:intergenic |
| AAACAAGGAGAAGAAAATGA+AGG | 0.472952 | 8_1:+50169024 | None:intergenic |
| AGCTATCCCCATAGAGCTCT+GGG | 0.473291 | 8_1:+50166643 | None:intergenic |
| TGGTGGCTTGAATATGGATC+TGG | 0.475485 | 8_1:-50164842 | Msa1198540:CDS |
| AGGCTTTGAAAATGGTGAAT+GGG | 0.476894 | 8_1:-50169245 | Msa1198540:five_prime_UTR |
| AGGATCCAAAGCATGGGAAT+TGG | 0.479599 | 8_1:-50164862 | Msa1198540:CDS |
| AGGTCAGCCCAGAGCTCTAT+GGG | 0.482474 | 8_1:-50166650 | Msa1198540:CDS |
| ACCTGAATTGTCTTAACAGC+AGG | 0.484466 | 8_1:+50168882 | None:intergenic |
| GCAACAATGGTTCAATTTGG+TGG | 0.484648 | 8_1:-50164767 | Msa1198540:CDS |
| GTGAGTGGGAATGAGTACTA+TGG | 0.487457 | 8_1:-50167332 | Msa1198540:CDS |
| AAAATTATAACTTTCAATTG+TGG | 0.487536 | 8_1:-50168533 | Msa1198540:CDS |
| TCTCAAATATGGATCATCTC+TGG | 0.501761 | 8_1:-50167248 | Msa1198540:CDS |
| CTTTAGAAATATGCAAGTTG+TGG | 0.502120 | 8_1:-50164651 | Msa1198540:CDS |
| TCCAATAAGTGAAGAATCTA+GGG | 0.502742 | 8_1:+50166619 | None:intergenic |
| GAAGGAGGAGGGAGATGACT+GGG | 0.504763 | 8_1:+50169042 | None:intergenic |
| CCAAGAGAGCATAAGCAAAT+GGG | 0.509356 | 8_1:-50168561 | Msa1198540:CDS |
| TTATGCTCTCTTGGTCTCTC+CGG | 0.511099 | 8_1:+50168570 | None:intergenic |
| TCATATGGACTTTCCACTTG+TGG | 0.512196 | 8_1:+50167281 | None:intergenic |
| AGAAGGAACTAATAATGGCT+GGG | 0.523901 | 8_1:-50164555 | Msa1198540:CDS |
| TGGGGTTAGATTTGTTCCAA+TGG | 0.524090 | 8_1:-50169166 | Msa1198540:CDS |
| GAGAAGAAAATGAAGGAGGA+GGG | 0.526751 | 8_1:+50169031 | None:intergenic |
| TCTCACACTTCTACCCAAAT+GGG | 0.527784 | 8_1:-50164716 | Msa1198540:CDS |
| ATCCAAAGCATGGGAATTGG+TGG | 0.528426 | 8_1:-50164859 | Msa1198540:CDS |
| ATGGATCTGGAAACTTGATT+GGG | 0.531742 | 8_1:-50164829 | Msa1198540:CDS |
| AACATAGGATGGTCAAAAGC+TGG | 0.536748 | 8_1:+50168722 | None:intergenic |
| TTGCAGACTGATGCATATCA+AGG | 0.537288 | 8_1:-50166467 | Msa1198540:intron |
| TTTATGTGTATAGGATCCTC+CGG | 0.539657 | 8_1:-50168589 | Msa1198540:intron |
| CAATCTATGATATCACCATC+AGG | 0.544949 | 8_1:+50168764 | None:intergenic |
| AAGAGTTTCACAAGTTTAGG+AGG | 0.546074 | 8_1:-50168938 | Msa1198540:CDS |
| CAAGGAGAAGAAAATGAAGG+AGG | 0.547694 | 8_1:+50169027 | None:intergenic |
| TTGTACCTCATGTCCATCGC+CGG | 0.547979 | 8_1:+50168383 | None:intergenic |
| TTTGTCCTCTCAACATAGGA+TGG | 0.550432 | 8_1:+50168711 | None:intergenic |
| TACAACATTGAGATTTGGCA+AGG | 0.560466 | 8_1:+50164607 | None:intergenic |
| TGCGTGTAGGATCCAAAGCA+TGG | 0.565093 | 8_1:-50164869 | Msa1198540:intron |
| AAATGTGTGGGTCCCACAAG+TGG | 0.566747 | 8_1:-50167294 | Msa1198540:CDS |
| GTATATTATAACAATTTGGA+CGG | 0.567975 | 8_1:+50164579 | None:intergenic |
| TAGATTCTTCACTTATTGGA+CGG | 0.568545 | 8_1:-50166616 | Msa1198540:intron |
| ACTTCTACCCAAATGGGTAG+TGG | 0.571003 | 8_1:-50164710 | Msa1198540:CDS |
| AATGATGCACAGCATGCAGT+TGG | 0.572287 | 8_1:-50167359 | Msa1198540:intron |
| CTTAAAGGATAGTGCAACAA+TGG | 0.576183 | 8_1:-50164780 | Msa1198540:CDS |
| TGCTCTCTTGGTCTCTCCGG+AGG | 0.583271 | 8_1:+50168573 | None:intergenic |
| CAAAAGCTAGCATAAATGTG+TGG | 0.585357 | 8_1:-50167307 | Msa1198540:CDS |
| AGAATGGACACCACCGGCGA+TGG | 0.585596 | 8_1:-50168396 | Msa1198540:CDS |
| GAAGGAACTAATAATGGCTG+GGG | 0.587892 | 8_1:-50164554 | Msa1198540:CDS |
| AATTGTTATAATATACAAGA+AGG | 0.590507 | 8_1:-50164572 | Msa1198540:CDS |
| TTTGACCATCCTATGTTGAG+AGG | 0.592755 | 8_1:-50168716 | Msa1198540:CDS |
| GTTTATTCTTCAGAAACAAG+TGG | 0.596638 | 8_1:-50168987 | Msa1198540:CDS |
| CACCACCGGCGATGGACATG+AGG | 0.599402 | 8_1:-50168388 | Msa1198540:intron |
| GCAAGAAAACAACACAAATG+TGG | 0.599836 | 8_1:-50169101 | Msa1198540:CDS |
| CTGATGCATATCAAGGAACT+GGG | 0.602205 | 8_1:-50166460 | Msa1198540:CDS |
| AAGTGTGTGAATAGGGATGA+TGG | 0.604788 | 8_1:+50164800 | None:intergenic |
| TACCTCATGTCCATCGCCGG+TGG | 0.612456 | 8_1:+50168386 | None:intergenic |
| AAAAGCTAGCATAAATGTGT+GGG | 0.619969 | 8_1:-50167306 | Msa1198540:CDS |
| TATTAGCTTAATGATCTGGA+AGG | 0.620476 | 8_1:-50166336 | Msa1198540:intron |
| CATGACAAACCAAAGAAACA+AGG | 0.620517 | 8_1:+50169009 | None:intergenic |
| TCAGGTGAATCATGTCCAGA+AGG | 0.626410 | 8_1:-50168504 | Msa1198540:CDS |
| AATACACACAAACACAAACA+TGG | 0.626698 | 8_1:-50169075 | Msa1198540:CDS |
| GCGTGTAGGATCCAAAGCAT+GGG | 0.628244 | 8_1:-50164868 | Msa1198540:intron |
| ACAACATTGAGATTTGGCAA+GGG | 0.654257 | 8_1:+50164608 | None:intergenic |
| CGTGTTAGAATGGACACCAC+CGG | 0.654611 | 8_1:-50168402 | Msa1198540:CDS |
| CCAACTTCTACATATAATGG+AGG | 0.662547 | 8_1:-50166368 | Msa1198540:CDS |
| ATGCAGTTGGATATGTGAGT+GGG | 0.674700 | 8_1:-50167346 | Msa1198540:CDS |
| CATGCAGTTGGATATGTGAG+TGG | 0.677188 | 8_1:-50167347 | Msa1198540:CDS |
| TAGTGAATACAATGTCAACA+GGG | 0.716345 | 8_1:-50164739 | Msa1198540:CDS |
| GGTCAGCCCAGAGCTCTATG+GGG | 0.745363 | 8_1:-50166649 | Msa1198540:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TAAATATATTTTTTATTAAT+GGG | + | chr8_1:50167220-50167239 | None:intergenic | 0.0% |
| !!! | TTAAATATATTTTTTATTAA+TGG | + | chr8_1:50167221-50167240 | None:intergenic | 0.0% |
| !!! | TTTTAAATTTATTAAATAAA+CGG | - | chr8_1:50167536-50167555 | Msa1198540:intron | 0.0% |
| !!! | TCTTTTGAAATAATTAATAT+CGG | - | chr8_1:50165895-50165914 | Msa1198540:intron | 10.0% |
| !!! | TTTTATCAGAATATTATTTT+TGG | + | chr8_1:50166105-50166124 | None:intergenic | 10.0% |
| !! | TTAAAAATTGTTTATAAACA+TGG | - | chr8_1:50167616-50167635 | Msa1198540:intron | 10.0% |
| !! | AAAAAATATGATAAATTATG+TGG | + | chr8_1:50168332-50168351 | None:intergenic | 10.0% |
| !! | AAAAATGAAGTAATAAAAAA+AGG | + | chr8_1:50168445-50168464 | None:intergenic | 10.0% |
| !!! | TCTTTTTTAAACTATTAAAA+AGG | - | chr8_1:50168741-50168760 | Msa1198540:CDS | 10.0% |
| !!! | GTCATATATTATATTTTTGT+TGG | - | chr8_1:50164535-50164554 | Msa1198540:CDS | 15.0% |
| !!! | ATATTATATTTTTGTTGGAT+TGG | - | chr8_1:50164540-50164559 | Msa1198540:CDS | 15.0% |
| !!! | CATCTATTTTTTCTTAAAAA+AGG | + | chr8_1:50164907-50164926 | None:intergenic | 15.0% |
| !!! | CTTTTTTAAGAAAAAATAGA+TGG | - | chr8_1:50164905-50164924 | Msa1198540:intron | 15.0% |
| !! | TATTTCAACTTATAATTGTT+CGG | - | chr8_1:50165119-50165138 | Msa1198540:intron | 15.0% |
| !! | AAAATTATAACTTTCAATTG+TGG | - | chr8_1:50165199-50165218 | Msa1198540:intron | 15.0% |
| !!! | TTTTATGTTTCTTTTCATTA+TGG | - | chr8_1:50165437-50165456 | Msa1198540:intron | 15.0% |
| !!! | TTTTGGCTTATATAAAATTA+CGG | - | chr8_1:50165606-50165625 | Msa1198540:intron | 15.0% |
| !! | AAAGAAAATATAGACAAAAA+TGG | + | chr8_1:50165693-50165712 | None:intergenic | 15.0% |
| !! | ATTATTTCAAAAGAAATGAA+TGG | + | chr8_1:50165889-50165908 | None:intergenic | 15.0% |
| !! | AAAAAGAAAAAGAAAACATT+TGG | + | chr8_1:50165937-50165956 | None:intergenic | 15.0% |
| !! | CTATTGAAGATAAAAATAAT+TGG | + | chr8_1:50166257-50166276 | None:intergenic | 15.0% |
| !! | ATTTATATTAGATTCAATGT+TGG | + | chr8_1:50166304-50166323 | None:intergenic | 15.0% |
| !!! | ATTTTTTACTTGTCATTTTA+AGG | - | chr8_1:50166645-50166664 | Msa1198540:CDS | 15.0% |
| !!! | AAAGTATCATTATTAAGTAT+TGG | + | chr8_1:50166789-50166808 | None:intergenic | 15.0% |
| !! | TTTATACATATCAAGAAAAA+TGG | + | chr8_1:50166844-50166863 | None:intergenic | 15.0% |
| !! | AACAAATAGAACAATTAATT+TGG | - | chr8_1:50166867-50166886 | Msa1198540:intron | 15.0% |
| !!! | AATATTTTGTAACAAATCAA+TGG | + | chr8_1:50167889-50167908 | None:intergenic | 15.0% |
| !! | TGAAAAAAAGAAACAAAAAA+GGG | + | chr8_1:50168309-50168328 | None:intergenic | 15.0% |
| !! | TCTTGTATATTATAACAATT+TGG | + | chr8_1:50169160-50169179 | None:intergenic | 15.0% |
| !! | AATTGTTATAATATACAAGA+AGG | - | chr8_1:50169160-50169179 | Msa1198540:CDS | 15.0% |
| !!! | ATGTATTATTCATTTTCTTA+GGG | + | chr8_1:50169247-50169266 | None:intergenic | 15.0% |
| !!! | TATGTATTATTCATTTTCTT+AGG | + | chr8_1:50169248-50169267 | None:intergenic | 15.0% |
| !!! | ATTTGAGTGTTCTTATATTT+TGG | + | chr8_1:50164598-50164617 | None:intergenic | 20.0% |
| !! | AAAACTAAGAAAAATACCAA+TGG | + | chr8_1:50165049-50165068 | None:intergenic | 20.0% |
| !!! | TCTTCTTTTATTCTTCTAAT+CGG | + | chr8_1:50165261-50165280 | None:intergenic | 20.0% |
| !!! | TCTATGTTAAGTTGTTTTTT+GGG | + | chr8_1:50165498-50165517 | None:intergenic | 20.0% |
| !!! | ATCTATGTTAAGTTGTTTTT+TGG | + | chr8_1:50165499-50165518 | None:intergenic | 20.0% |
| !! | AACTTAACATAGATAGATAA+TGG | - | chr8_1:50165505-50165524 | Msa1198540:intron | 20.0% |
| !!! | ATTTTACGTTAAATGTGTTT+TGG | - | chr8_1:50165589-50165608 | Msa1198540:intron | 20.0% |
| !!! | AAATGGTCAAATTTCTTTTA+CGG | + | chr8_1:50165676-50165695 | None:intergenic | 20.0% |
| !!! | ATAAAGTACTAACAACAAAT+TGG | - | chr8_1:50166342-50166361 | Msa1198540:CDS | 20.0% |
| !!! | TCATTATTAAGTATTGGATT+TGG | + | chr8_1:50166783-50166802 | None:intergenic | 20.0% |
| !! | TATCAAGAAAAATGGATAAA+TGG | + | chr8_1:50166836-50166855 | None:intergenic | 20.0% |
| !!! | AACAATTAATTTGGAAAGAA+GGG | - | chr8_1:50166876-50166895 | Msa1198540:intron | 20.0% |
| !! | ACGAAAATTCTTAAATTGAT+TGG | - | chr8_1:50166946-50166965 | Msa1198540:intron | 20.0% |
| !! | ATTCTTAAATTGATTGGATT+TGG | - | chr8_1:50166952-50166971 | Msa1198540:intron | 20.0% |
| !! | AAAACATTGATGAAAATGAA+AGG | + | chr8_1:50167016-50167035 | None:intergenic | 20.0% |
| !!! | CAATGTTTTTAATCTTGTAT+TGG | - | chr8_1:50167027-50167046 | Msa1198540:intron | 20.0% |
| !!! | AGTTTAAGTAATTTTTATGC+AGG | - | chr8_1:50167062-50167081 | Msa1198540:intron | 20.0% |
| !! | TCATTAAGCTAATATCAAAT+TGG | + | chr8_1:50167390-50167409 | None:intergenic | 20.0% |
| !! | AAATTGCTTATAAATGTGAT+CGG | + | chr8_1:50167515-50167534 | None:intergenic | 20.0% |
| !!! | AATAATCTCATTGACTAAAT+TGG | + | chr8_1:50167783-50167802 | None:intergenic | 20.0% |
| !!! | AAATCAATGGTTAGTTAATT+TGG | + | chr8_1:50167876-50167895 | None:intergenic | 20.0% |
| !! | GTGAAAAAAAGAAACAAAAA+AGG | + | chr8_1:50168310-50168329 | None:intergenic | 20.0% |
| !! | GTAAAATACGCAAAATATTA+GGG | + | chr8_1:50168484-50168503 | None:intergenic | 20.0% |
| !! | AGTAAAATACGCAAAATATT+AGG | + | chr8_1:50168485-50168504 | None:intergenic | 20.0% |
| !! | GTATATTATAACAATTTGGA+CGG | + | chr8_1:50169156-50169175 | None:intergenic | 20.0% |
| !! | AATATTCTTCTTTCATTTCT+TGG | - | chr8_1:50169302-50169321 | Msa1198540:five_prime_UTR | 20.0% |
| ! | TTAGATTGTCTTACAAATAC+TGG | - | chr8_1:50164513-50164532 | Msa1198540:CDS | 25.0% |
| !!! | TATTTTTGTTGGATTGGATA+TGG | - | chr8_1:50164546-50164565 | Msa1198540:CDS | 25.0% |
| !!! | ATTTTTGTTGGATTGGATAT+GGG | - | chr8_1:50164547-50164566 | Msa1198540:CDS | 25.0% |
| !!! | TATATTTTGGTTTTGTCCAT+TGG | + | chr8_1:50164585-50164604 | None:intergenic | 25.0% |
| !!! | TTGGTAGAAAAGTTTGATTT+TGG | + | chr8_1:50164771-50164790 | None:intergenic | 25.0% |
| !!! | AGTTTTTTTTCTCTATTGAG+TGG | - | chr8_1:50165063-50165082 | Msa1198540:intron | 25.0% |
| ! | AAAATTGAAACGTGTTAGAA+TGG | - | chr8_1:50165320-50165339 | Msa1198540:intron | 25.0% |
| !! | CTTTTCATTATGGTAAAGTA+TGG | - | chr8_1:50165447-50165466 | Msa1198540:intron | 25.0% |
| !!! | CATAGATAGATAATGGAAAT+TGG | - | chr8_1:50165512-50165531 | Msa1198540:intron | 25.0% |
| !!! | CATATGGTAGTATTTTTTGA+GGG | - | chr8_1:50165540-50165559 | Msa1198540:intron | 25.0% |
| !!! | AGTCCTTTTTCAATTTAAAG+TGG | - | chr8_1:50166184-50166203 | Msa1198540:intron | 25.0% |
| ! | TGACCACTTTAAATTGAAAA+AGG | + | chr8_1:50166190-50166209 | None:intergenic | 25.0% |
| ! | CTTCTCAGTTTATTAATATG+TGG | - | chr8_1:50166230-50166249 | Msa1198540:intron | 25.0% |
| ! | ATGACAAGTAAAAAATGAGT+GGG | + | chr8_1:50166641-50166660 | None:intergenic | 25.0% |
| ! | AATGACAAGTAAAAAATGAG+TGG | + | chr8_1:50166642-50166661 | None:intergenic | 25.0% |
| !! | GAACAATTAATTTGGAAAGA+AGG | - | chr8_1:50166875-50166894 | Msa1198540:intron | 25.0% |
| !!! | GATTTGGTTTTGCATTAAAT+AGG | - | chr8_1:50166968-50166987 | Msa1198540:intron | 25.0% |
| ! | TAAGTAAATTGATTGAAGCA+AGG | - | chr8_1:50167139-50167158 | Msa1198540:intron | 25.0% |
| ! | AAGTAAATTGATTGAAGCAA+GGG | - | chr8_1:50167140-50167159 | Msa1198540:intron | 25.0% |
| !! | TTGATATTAGCTTAATGATC+TGG | - | chr8_1:50167392-50167411 | Msa1198540:intron | 25.0% |
| !!! | ATAATCTTCTAAGGTCATTT+TGG | + | chr8_1:50167441-50167460 | None:intergenic | 25.0% |
| ! | AAAATGACCTTAGAAGATTA+TGG | - | chr8_1:50167440-50167459 | Msa1198540:intron | 25.0% |
| ! | AAATGACCTTAGAAGATTAT+GGG | - | chr8_1:50167441-50167460 | Msa1198540:intron | 25.0% |
| ! | AAATTACCCATAATCTTCTA+AGG | + | chr8_1:50167450-50167469 | None:intergenic | 25.0% |
| ! | TTAGAAGATTATGGGTAATT+TGG | - | chr8_1:50167449-50167468 | Msa1198540:intron | 25.0% |
| ! | TTGAAAATAAGTACTCCATT+GGG | + | chr8_1:50167642-50167661 | None:intergenic | 25.0% |
| ! | ATTGAAAATAAGTACTCCAT+TGG | + | chr8_1:50167643-50167662 | None:intergenic | 25.0% |
| ! | GAAAATTTAAGCTGAAAATG+TGG | - | chr8_1:50167935-50167954 | Msa1198540:intron | 25.0% |
| ! | GTTCAAATGTTAGTGAATTT+AGG | - | chr8_1:50168162-50168181 | Msa1198540:intron | 25.0% |
| ! | AGTAGTAAAGTGAGTAAATA+TGG | + | chr8_1:50168190-50168209 | None:intergenic | 25.0% |
| ! | ATTTACTCACTTTACTACTT+TGG | - | chr8_1:50168191-50168210 | Msa1198540:intron | 25.0% |
| !! | GAAAGAGATAAAAAGCATAA+GGG | + | chr8_1:50168256-50168275 | None:intergenic | 25.0% |
| !! | TGAAAGAGATAAAAAGCATA+AGG | + | chr8_1:50168257-50168276 | None:intergenic | 25.0% |
| ! | TGAAGTAATAAAAAAAGGTG+TGG | + | chr8_1:50168440-50168459 | None:intergenic | 25.0% |
| ! | AGTCAAAAAGAAGAAAACAA+AGG | + | chr8_1:50168521-50168540 | None:intergenic | 25.0% |
| ! | ATACAAGAAGGAACTAATAA+TGG | - | chr8_1:50169172-50169191 | Msa1198540:exon | 25.0% |
| !!! | TGGGGAAATTACTTTTATTA+TGG | - | chr8_1:50169196-50169215 | Msa1198540:five_prime_UTR | 25.0% |
| !!! | GGAAATTACTTTTATTATGG+TGG | - | chr8_1:50169199-50169218 | Msa1198540:five_prime_UTR | 25.0% |
| !! | TTTTTGTTGGATTGGATATG+GGG | - | chr8_1:50164548-50164567 | Msa1198540:CDS | 30.0% |
| AATACACACAAACACAAACA+TGG | - | chr8_1:50164657-50164676 | Msa1198540:CDS | 30.0% | |
| AAACAAGGAGAAGAAAATGA+AGG | + | chr8_1:50164711-50164730 | None:intergenic | 30.0% | |
| !! | TTTTCTTCTCCTTGTTTCTT+TGG | - | chr8_1:50164714-50164733 | Msa1198540:CDS | 30.0% |
| GTTTATTCTTCAGAAACAAG+TGG | - | chr8_1:50164745-50164764 | Msa1198540:CDS | 30.0% | |
| AACTTGTGAAACTCTTCATT+TGG | + | chr8_1:50164790-50164809 | None:intergenic | 30.0% | |
| ATGAAGAGTTTCACAAGTTT+AGG | - | chr8_1:50164791-50164810 | Msa1198540:CDS | 30.0% | |
| !! | TTGTTCGGTTTTATGTGTAT+AGG | - | chr8_1:50165134-50165153 | Msa1198540:intron | 30.0% |
| ATGGAAATTGGTAAAGCATA+TGG | - | chr8_1:50165524-50165543 | Msa1198540:intron | 30.0% | |
| !!! | GCATATGGTAGTATTTTTTG+AGG | - | chr8_1:50165539-50165558 | Msa1198540:intron | 30.0% |
| !!! | TTTTTTGAGGGTAAAGCATA+TGG | - | chr8_1:50165552-50165571 | Msa1198540:intron | 30.0% |
| TGGCTTATATAAAATTACGG+TGG | - | chr8_1:50165609-50165628 | Msa1198540:intron | 30.0% | |
| ! | AGACTAACTTTTCTTTTGGA+AGG | + | chr8_1:50165653-50165672 | None:intergenic | 30.0% |
| ACATACTTTAGTCCTTATGT+AGG | + | chr8_1:50165738-50165757 | None:intergenic | 30.0% | |
| TGTATTAATGTGAGACTACA+AGG | + | chr8_1:50166055-50166074 | None:intergenic | 30.0% | |
| AAAAGCTAGCATAAATGTGT+GGG | - | chr8_1:50166426-50166445 | Msa1198540:CDS | 30.0% | |
| AATTCAGCTTGTCTCAAATA+TGG | - | chr8_1:50166473-50166492 | Msa1198540:intron | 30.0% | |
| !!! | TTTGCACTGCTTTTTTTAGT+AGG | - | chr8_1:50166611-50166630 | Msa1198540:intron | 30.0% |
| TGATGAAAATGAAAGGTAGT+TGG | + | chr8_1:50167009-50167028 | None:intergenic | 30.0% | |
| TCCAATAAGTGAAGAATCTA+GGG | + | chr8_1:50167116-50167135 | None:intergenic | 30.0% | |
| TAGATTCTTCACTTATTGGA+CGG | - | chr8_1:50167116-50167135 | Msa1198540:intron | 30.0% | |
| ACTAGCAGTAATATTGCAAT+TGG | - | chr8_1:50167328-50167347 | Msa1198540:CDS | 30.0% | |
| TCTCCAACTTCTACATATAA+TGG | - | chr8_1:50167361-50167380 | Msa1198540:intron | 30.0% | |
| ! | TATTAGCTTAATGATCTGGA+AGG | - | chr8_1:50167396-50167415 | Msa1198540:intron | 30.0% |
| AGTAAATACCAGTAGAAACT+TGG | + | chr8_1:50167486-50167505 | None:intergenic | 30.0% | |
| TAATGAGACTTCCAAACTAA+TGG | + | chr8_1:50167989-50168008 | None:intergenic | 30.0% | |
| TAGAATTGTAGAAGAAGCAA+GGG | - | chr8_1:50168034-50168053 | Msa1198540:intron | 30.0% | |
| CAACATAAATGACACACAAA+AGG | - | chr8_1:50168106-50168125 | Msa1198540:intron | 30.0% | |
| CTTTAAGTCGTAAAAAGCAA+AGG | + | chr8_1:50168397-50168416 | None:intergenic | 30.0% | |
| TGTATCGTTGAAGATTTACT+AGG | - | chr8_1:50168627-50168646 | Msa1198540:intron | 30.0% | |
| GTATCGTTGAAGATTTACTA+GGG | - | chr8_1:50168628-50168647 | Msa1198540:intron | 30.0% | |
| ATCCTTTAAGTGTGTGAATA+GGG | + | chr8_1:50168942-50168961 | None:intergenic | 30.0% | |
| TATCCTTTAAGTGTGTGAAT+AGG | + | chr8_1:50168943-50168962 | None:intergenic | 30.0% | |
| ATAGTGAATACAATGTCAAC+AGG | - | chr8_1:50168992-50169011 | Msa1198540:CDS | 30.0% | |
| TAGTGAATACAATGTCAACA+GGG | - | chr8_1:50168993-50169012 | Msa1198540:CDS | 30.0% | |
| ! | CTTTAGAAATATGCAAGTTG+TGG | - | chr8_1:50169081-50169100 | Msa1198540:CDS | 30.0% |
| TTAGCTACAACATTGAGATT+TGG | + | chr8_1:50169133-50169152 | None:intergenic | 30.0% | |
| TTCTTCTTTCATTTCTTGGT+TGG | - | chr8_1:50169306-50169325 | Msa1198540:five_prime_UTR | 30.0% | |
| TCTTCTTTCATTTCTTGGTT+GGG | - | chr8_1:50169307-50169326 | Msa1198540:five_prime_UTR | 30.0% | |
| CTCTCTCTGAACATATTTCA+GGG | + | chr8_1:50164440-50164459 | None:intergenic | 35.0% | |
| TCTCTCTCTGAACATATTTC+AGG | + | chr8_1:50164441-50164460 | None:intergenic | 35.0% | |
| !!! | AGAAAGAGAGAGCATTTTCT+TGG | - | chr8_1:50164458-50164477 | Msa1198540:three_prime_UTR | 35.0% |
| !! | AAGGCTTTGAAAATGGTGAA+TGG | - | chr8_1:50164486-50164505 | Msa1198540:exon | 35.0% |
| !! | AGGCTTTGAAAATGGTGAAT+GGG | - | chr8_1:50164487-50164506 | Msa1198540:exon | 35.0% |
| GCAAGAAAACAACACAAATG+TGG | - | chr8_1:50164631-50164650 | Msa1198540:CDS | 35.0% | |
| CATGACAAACCAAAGAAACA+AGG | + | chr8_1:50164726-50164745 | None:intergenic | 35.0% | |
| AAGAGTTTCACAAGTTTAGG+AGG | - | chr8_1:50164794-50164813 | Msa1198540:CDS | 35.0% | |
| CCATAAAAATGCATCTTCGA+CGG | - | chr8_1:50164818-50164837 | Msa1198540:CDS | 35.0% | |
| CAATCTATGATATCACCATC+AGG | + | chr8_1:50164971-50164990 | None:intergenic | 35.0% | |
| TTTATGTGTATAGGATCCTC+CGG | - | chr8_1:50165143-50165162 | Msa1198540:intron | 35.0% | |
| TTTCAATTGTGGAGTTTCTC+AGG | - | chr8_1:50165210-50165229 | Msa1198540:intron | 35.0% | |
| GCTTGCTCTATTAACACATT+TGG | - | chr8_1:50165294-50165313 | Msa1198540:intron | 35.0% | |
| !!! | GTTTCTGTTGTTTTCTGTGA+TGG | + | chr8_1:50165377-50165396 | None:intergenic | 35.0% |
| ! | ACGGAGACTAACTTTTCTTT+TGG | + | chr8_1:50165657-50165676 | None:intergenic | 35.0% |
| !!! | GTGATTTTAGCTCCTACATA+AGG | - | chr8_1:50165723-50165742 | Msa1198540:intron | 35.0% |
| ATTAATGTGAGACTACAAGG+AGG | + | chr8_1:50166052-50166071 | None:intergenic | 35.0% | |
| AAAGTGGTCACTGAATTTCA+TGG | - | chr8_1:50166200-50166219 | Msa1198540:intron | 35.0% | |
| CAAAAGCTAGCATAAATGTG+TGG | - | chr8_1:50166425-50166444 | Msa1198540:CDS | 35.0% | |
| TGAGACAAGCTGAATTCATA+TGG | + | chr8_1:50166469-50166488 | None:intergenic | 35.0% | |
| TCTCAAATATGGATCATCTC+TGG | - | chr8_1:50166484-50166503 | Msa1198540:intron | 35.0% | |
| ACCCTAGATTCTTCACTTAT+TGG | - | chr8_1:50167112-50167131 | Msa1198540:intron | 35.0% | |
| GTCCAATAAGTGAAGAATCT+AGG | + | chr8_1:50167117-50167136 | None:intergenic | 35.0% | |
| TAAATTGATTGAAGCAAGGG+AGG | - | chr8_1:50167143-50167162 | Msa1198540:intron | 35.0% | |
| TGCTACAATTTACTTTGCTC+TGG | - | chr8_1:50167295-50167314 | Msa1198540:CDS | 35.0% | |
| CCTCCATTATATGTAGAAGT+TGG | + | chr8_1:50167367-50167386 | None:intergenic | 35.0% | |
| CCAACTTCTACATATAATGG+AGG | - | chr8_1:50167364-50167383 | Msa1198540:intron | 35.0% | |
| AATACCAGTAGAAACTTGGA+GGG | + | chr8_1:50167482-50167501 | None:intergenic | 35.0% | |
| AAATACCAGTAGAAACTTGG+AGG | + | chr8_1:50167483-50167502 | None:intergenic | 35.0% | |
| TTGCTTATAAATGTGATCGG+AGG | + | chr8_1:50167512-50167531 | None:intergenic | 35.0% | |
| TGTTTATAAACATGGCCCAA+TGG | - | chr8_1:50167624-50167643 | Msa1198540:intron | 35.0% | |
| TCTCATAGTCAAAGTCTCAA+AGG | - | chr8_1:50167913-50167932 | Msa1198540:intron | 35.0% | |
| GTAGAATTGTAGAAGAAGCA+AGG | - | chr8_1:50168033-50168052 | Msa1198540:intron | 35.0% | |
| ! | AAAGTGCTCAGAAAGAATGA+GGG | + | chr8_1:50168360-50168379 | None:intergenic | 35.0% |
| !! | AGAAGAAAACAAAGGTACCA+AGG | + | chr8_1:50168513-50168532 | None:intergenic | 35.0% |
| CACAATGTTAGTGTTGTGTA+TGG | - | chr8_1:50168771-50168790 | Msa1198540:intron | 35.0% | |
| TTGCTTCTATTTATGCGTGT+AGG | - | chr8_1:50168850-50168869 | Msa1198540:intron | 35.0% | |
| TATGGATCTGGAAACTTGAT+TGG | - | chr8_1:50168902-50168921 | Msa1198540:CDS | 35.0% | |
| ATGGATCTGGAAACTTGATT+GGG | - | chr8_1:50168903-50168922 | Msa1198540:CDS | 35.0% | |
| ATCCCTATTCACACACTTAA+AGG | - | chr8_1:50168937-50168956 | Msa1198540:CDS | 35.0% | |
| CTTAAAGGATAGTGCAACAA+TGG | - | chr8_1:50168952-50168971 | Msa1198540:CDS | 35.0% | |
| AGTGCAACAATGGTTCAATT+TGG | - | chr8_1:50168962-50168981 | Msa1198540:CDS | 35.0% | |
| AAAATGTCCACTACCCATTT+GGG | + | chr8_1:50169032-50169051 | None:intergenic | 35.0% | |
| ACAACATTGAGATTTGGCAA+GGG | + | chr8_1:50169127-50169146 | None:intergenic | 35.0% | |
| TACAACATTGAGATTTGGCA+AGG | + | chr8_1:50169128-50169147 | None:intergenic | 35.0% | |
| AAGAAGGAACTAATAATGGC+TGG | - | chr8_1:50169176-50169195 | Msa1198540:exon | 35.0% | |
| AGAAGGAACTAATAATGGCT+GGG | - | chr8_1:50169177-50169196 | Msa1198540:exon | 35.0% | |
| ! | TACTTTTATTATGGTGGTCC+TGG | - | chr8_1:50169205-50169224 | Msa1198540:five_prime_UTR | 35.0% |
| ! | GAGCATTTTCTTGGCTTCAA+AGG | - | chr8_1:50164467-50164486 | Msa1198540:three_prime_UTR | 40.0% |
| !! | GGCTTCAAAGGCTTTGAAAA+TGG | - | chr8_1:50164479-50164498 | Msa1198540:three_prime_UTR | 40.0% |
| ! | TGGGGTTAGATTTGTTCCAA+TGG | - | chr8_1:50164566-50164585 | Msa1198540:CDS | 40.0% |
| GAGAAGAAAATGAAGGAGGA+GGG | + | chr8_1:50164704-50164723 | None:intergenic | 40.0% | |
| CAAGGAGAAGAAAATGAAGG+AGG | + | chr8_1:50164708-50164727 | None:intergenic | 40.0% | |
| ! | CCGTCGAAGATGCATTTTTA+TGG | + | chr8_1:50164821-50164840 | None:intergenic | 40.0% |
| ACCTGAATTGTCTTAACAGC+AGG | + | chr8_1:50164853-50164872 | None:intergenic | 40.0% | |
| AACATAGGATGGTCAAAAGC+TGG | + | chr8_1:50165013-50165032 | None:intergenic | 40.0% | |
| TTTGACCATCCTATGTTGAG+AGG | - | chr8_1:50165016-50165035 | Msa1198540:intron | 40.0% | |
| TTTGTCCTCTCAACATAGGA+TGG | + | chr8_1:50165024-50165043 | None:intergenic | 40.0% | |
| ! | GGTTTTTGTCCTCTCAACAT+AGG | + | chr8_1:50165028-50165047 | None:intergenic | 40.0% |
| GTTGAGAGGACAAAAACCAT+TGG | - | chr8_1:50165030-50165049 | Msa1198540:intron | 40.0% | |
| ! | ACCAAGAGAGCATAAGCAAA+TGG | - | chr8_1:50165170-50165189 | Msa1198540:intron | 40.0% |
| ! | CCAAGAGAGCATAAGCAAAT+GGG | - | chr8_1:50165171-50165190 | Msa1198540:intron | 40.0% |
| ATGCAGTTGGATATGTGAGT+GGG | - | chr8_1:50166386-50166405 | Msa1198540:CDS | 40.0% | |
| CATATGGACTTTCCACTTGT+GGG | + | chr8_1:50166453-50166472 | None:intergenic | 40.0% | |
| TCATATGGACTTTCCACTTG+TGG | + | chr8_1:50166454-50166473 | None:intergenic | 40.0% | |
| ! | TGGATCATCTCTGGTTCATT+TGG | - | chr8_1:50166493-50166512 | Msa1198540:intron | 40.0% |
| GATCTCAATACCATTGAAGC+TGG | - | chr8_1:50166520-50166539 | Msa1198540:intron | 40.0% | |
| TCAATACCATTGAAGCTGGT+TGG | - | chr8_1:50166524-50166543 | Msa1198540:intron | 40.0% | |
| TTGCAGACTGATGCATATCA+AGG | - | chr8_1:50167265-50167284 | Msa1198540:CDS | 40.0% | |
| ACTGATGCATATCAAGGAAC+TGG | - | chr8_1:50167271-50167290 | Msa1198540:CDS | 40.0% | |
| CTGATGCATATCAAGGAACT+GGG | - | chr8_1:50167272-50167291 | Msa1198540:CDS | 40.0% | |
| ATATCCCTCCAAGTTTCTAC+TGG | - | chr8_1:50167475-50167494 | Msa1198540:intron | 40.0% | |
| ! | CTCATTGACTAAATTGGCAC+TGG | + | chr8_1:50167777-50167796 | None:intergenic | 40.0% |
| CTGAAAATGTGGTCAATGCA+TGG | - | chr8_1:50167946-50167965 | Msa1198540:intron | 40.0% | |
| AAAATGTGGTCAATGCATGG+TGG | - | chr8_1:50167949-50167968 | Msa1198540:intron | 40.0% | |
| AAATGTGGTCAATGCATGGT+GGG | - | chr8_1:50167950-50167969 | Msa1198540:intron | 40.0% | |
| ! | CAAAGTGCTCAGAAAGAATG+AGG | + | chr8_1:50168361-50168380 | None:intergenic | 40.0% |
| !! | AGAAAACAAAGGTACCAAGG+TGG | + | chr8_1:50168510-50168529 | None:intergenic | 40.0% |
| TCTGACACACATTCAATCTG+AGG | + | chr8_1:50168665-50168684 | None:intergenic | 40.0% | |
| ACATATGCTTGTGTTCGATG+TGG | - | chr8_1:50168691-50168710 | Msa1198540:intron | 40.0% | |
| CTGGAAACTTGATTGGGTAT+TGG | - | chr8_1:50168909-50168928 | Msa1198540:CDS | 40.0% | |
| AAGTGTGTGAATAGGGATGA+TGG | + | chr8_1:50168935-50168954 | None:intergenic | 40.0% | |
| GCAACAATGGTTCAATTTGG+TGG | - | chr8_1:50168965-50168984 | Msa1198540:CDS | 40.0% | |
| TCTCACACTTCTACCCAAAT+GGG | - | chr8_1:50169016-50169035 | Msa1198540:CDS | 40.0% | |
| CAAAATGTCCACTACCCATT+TGG | + | chr8_1:50169033-50169052 | None:intergenic | 40.0% | |
| GAAGGAACTAATAATGGCTG+GGG | - | chr8_1:50169178-50169197 | Msa1198540:exon | 40.0% | |
| GGAGAAGAAAATGAAGGAGG+AGG | + | chr8_1:50164705-50164724 | None:intergenic | 45.0% | |
| GCCTGCTGTTAAGACAATTC+AGG | - | chr8_1:50164849-50164868 | Msa1198540:CDS | 45.0% | |
| ! | GTTTTTCTGCAGAGTCCTGA+TGG | - | chr8_1:50164953-50164972 | Msa1198540:intron | 45.0% |
| TTATGCTCTCTTGGTCTCTC+CGG | + | chr8_1:50165165-50165184 | None:intergenic | 45.0% | |
| CCCATTTGCTTATGCTCTCT+TGG | + | chr8_1:50165174-50165193 | None:intergenic | 45.0% | |
| TCAGGTGAATCATGTCCAGA+AGG | - | chr8_1:50165228-50165247 | Msa1198540:intron | 45.0% | |
| CTAATCGGAATCGTTCCTTC+TGG | + | chr8_1:50165246-50165265 | None:intergenic | 45.0% | |
| ! | AGACTACAAGGAGGATTGGT+TGG | + | chr8_1:50166043-50166062 | None:intergenic | 45.0% |
| TGTGAGACTACAAGGAGGAT+TGG | + | chr8_1:50166047-50166066 | None:intergenic | 45.0% | |
| AATGATGCACAGCATGCAGT+TGG | - | chr8_1:50166373-50166392 | Msa1198540:CDS | 45.0% | |
| CATGCAGTTGGATATGTGAG+TGG | - | chr8_1:50166385-50166404 | Msa1198540:CDS | 45.0% | |
| GTGAGTGGGAATGAGTACTA+TGG | - | chr8_1:50166400-50166419 | Msa1198540:CDS | 45.0% | |
| ATTGATTGAAGCAAGGGAGG+TGG | - | chr8_1:50167146-50167165 | Msa1198540:intron | 45.0% | |
| AATGTGGTCAATGCATGGTG+GGG | - | chr8_1:50167951-50167970 | Msa1198540:intron | 45.0% | |
| AGGTGTGGCGTTCAGAATTA+TGG | + | chr8_1:50168425-50168444 | None:intergenic | 45.0% | |
| ! | GCGTATTTTACTCACCACCT+TGG | - | chr8_1:50168493-50168512 | Msa1198540:CDS | 45.0% |
| AGGATCCAAAGCATGGGAAT+TGG | - | chr8_1:50168870-50168889 | Msa1198540:intron | 45.0% | |
| ATCCAAAGCATGGGAATTGG+TGG | - | chr8_1:50168873-50168892 | Msa1198540:intron | 45.0% | |
| ! | GGGAATTGGTGGCTTGAATA+TGG | - | chr8_1:50168884-50168903 | Msa1198540:CDS | 45.0% |
| TGGTGGCTTGAATATGGATC+TGG | - | chr8_1:50168890-50168909 | Msa1198540:CDS | 45.0% | |
| GTCTCACACTTCTACCCAAA+TGG | - | chr8_1:50169015-50169034 | Msa1198540:CDS | 45.0% | |
| ACTTCTACCCAAATGGGTAG+TGG | - | chr8_1:50169022-50169041 | Msa1198540:CDS | 45.0% | |
| !! | TAGTGGACATTTTGCTGAGG+AGG | - | chr8_1:50169039-50169058 | Msa1198540:CDS | 45.0% |
| ! | AGTGGACATTTTGCTGAGGA+GGG | - | chr8_1:50169040-50169059 | Msa1198540:CDS | 45.0% |
| TTTATTATGGTGGTCCTGGC+AGG | - | chr8_1:50169209-50169228 | Msa1198540:five_prime_UTR | 45.0% | |
| ! | GGACATTTTACATTCCTGCC+AGG | + | chr8_1:50169226-50169245 | None:intergenic | 45.0% |
| !! | TATATTTAAAAAAATGATAA+TGG | - | chr8_1:50167232-50167251 | Msa1198540:intron | 5.0% |
| !! | ATACATAATTATAATTATAT+AGG | - | chr8_1:50169261-50169280 | Msa1198540:five_prime_UTR | 5.0% |
| CGTGTTAGAATGGACACCAC+CGG | - | chr8_1:50165330-50165349 | Msa1198540:intron | 50.0% | |
| TTGTACCTCATGTCCATCGC+CGG | + | chr8_1:50165352-50165371 | None:intergenic | 50.0% | |
| AAATGTGTGGGTCCCACAAG+TGG | - | chr8_1:50166438-50166457 | Msa1198540:CDS | 50.0% | |
| TACCATTGAAGCTGGTTGGC+AGG | - | chr8_1:50166528-50166547 | Msa1198540:intron | 50.0% | |
| AGCTATCCCCATAGAGCTCT+GGG | + | chr8_1:50167092-50167111 | None:intergenic | 50.0% | |
| TAGCTATCCCCATAGAGCTC+TGG | + | chr8_1:50167093-50167112 | None:intergenic | 50.0% | |
| ATGTGGTCAATGCATGGTGG+GGG | - | chr8_1:50167952-50167971 | Msa1198540:intron | 50.0% | |
| ! | CATGGGGCACTCCATTAGTT+TGG | - | chr8_1:50167975-50167994 | Msa1198540:intron | 50.0% |
| !!! | TTTTTTTGTGCGCGCGCGTT+TGG | - | chr8_1:50168801-50168820 | Msa1198540:intron | 50.0% |
| TGCGTGTAGGATCCAAAGCA+TGG | - | chr8_1:50168863-50168882 | Msa1198540:intron | 50.0% | |
| GCGTGTAGGATCCAAAGCAT+GGG | - | chr8_1:50168864-50168883 | Msa1198540:intron | 50.0% | |
| AGCCACCAATTCCCATGCTT+TGG | + | chr8_1:50168878-50168897 | None:intergenic | 50.0% | |
| !!! | GGGTAGTGGACATTTTGCTG+AGG | - | chr8_1:50169036-50169055 | Msa1198540:CDS | 50.0% |
| GAAGGAGGAGGGAGATGACT+GGG | + | chr8_1:50164693-50164712 | None:intergenic | 55.0% | |
| TGAAGGAGGAGGGAGATGAC+TGG | + | chr8_1:50164694-50164713 | None:intergenic | 55.0% | |
| TGCCTGCCAACCAGCTTCAA+TGG | + | chr8_1:50166533-50166552 | None:intergenic | 55.0% | |
| AGGTCAGCCCAGAGCTCTAT+GGG | - | chr8_1:50167082-50167101 | Msa1198540:intron | 55.0% | |
| ! | TCAATGCATGGTGGGGGCAT+GGG | - | chr8_1:50167958-50167977 | Msa1198540:intron | 55.0% |
| TGCTCTCTTGGTCTCTCCGG+AGG | + | chr8_1:50165162-50165181 | None:intergenic | 60.0% | |
| AGAATGGACACCACCGGCGA+TGG | - | chr8_1:50165336-50165355 | Msa1198540:intron | 60.0% | |
| TACCTCATGTCCATCGCCGG+TGG | + | chr8_1:50165349-50165368 | None:intergenic | 60.0% | |
| CAGGTCAGCCCAGAGCTCTA+TGG | - | chr8_1:50167081-50167100 | Msa1198540:intron | 60.0% | |
| GGTCAGCCCAGAGCTCTATG+GGG | - | chr8_1:50167083-50167102 | Msa1198540:intron | 60.0% | |
| ! | GTCAATGCATGGTGGGGGCA+TGG | - | chr8_1:50167957-50167976 | Msa1198540:intron | 60.0% |
| ! | CAATGCATGGTGGGGGCATG+GGG | - | chr8_1:50167959-50167978 | Msa1198540:intron | 60.0% |
| CACCACCGGCGATGGACATG+AGG | - | chr8_1:50165344-50165363 | Msa1198540:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_1 | gene | 50164424 | 50169330 | 50164424 | ID=Msa1198540;Name=Msa1198540 |
| chr8_1 | mRNA | 50164424 | 50169330 | 50164424 | ID=Msa1198540-mRNA-1;Parent=Msa1198540;Name=Msa1198540-mRNA-1;_AED=0.07;_eAED=0.07;_QI=141|0.83|0.85|1|0.83|0.85|7|81|437 |
| chr8_1 | exon | 50164424 | 50164882 | 50164424 | ID=Msa1198540-mRNA-1:exon:15749;Parent=Msa1198540-mRNA-1 |
| chr8_1 | exon | 50166337 | 50166483 | 50166337 | ID=Msa1198540-mRNA-1:exon:15748;Parent=Msa1198540-mRNA-1 |
| chr8_1 | exon | 50166617 | 50166670 | 50166617 | ID=Msa1198540-mRNA-1:exon:15747;Parent=Msa1198540-mRNA-1 |
| chr8_1 | exon | 50167238 | 50167369 | 50167238 | ID=Msa1198540-mRNA-1:exon:15746;Parent=Msa1198540-mRNA-1 |
| chr8_1 | exon | 50168389 | 50168598 | 50168389 | ID=Msa1198540-mRNA-1:exon:15745;Parent=Msa1198540-mRNA-1 |
| chr8_1 | exon | 50168703 | 50168789 | 50168703 | ID=Msa1198540-mRNA-1:exon:15744;Parent=Msa1198540-mRNA-1 |
| chr8_1 | exon | 50168884 | 50169330 | 50168884 | ID=Msa1198540-mRNA-1:exon:15743;Parent=Msa1198540-mRNA-1 |
| chr8_1 | five_prime_UTR | 50169190 | 50169330 | 50169190 | ID=Msa1198540-mRNA-1:five_prime_utr;Parent=Msa1198540-mRNA-1 |
| chr8_1 | CDS | 50168884 | 50169189 | 50168884 | ID=Msa1198540-mRNA-1:cds;Parent=Msa1198540-mRNA-1 |
| chr8_1 | CDS | 50168703 | 50168789 | 50168703 | ID=Msa1198540-mRNA-1:cds;Parent=Msa1198540-mRNA-1 |
| chr8_1 | CDS | 50168389 | 50168598 | 50168389 | ID=Msa1198540-mRNA-1:cds;Parent=Msa1198540-mRNA-1 |
| chr8_1 | CDS | 50167238 | 50167369 | 50167238 | ID=Msa1198540-mRNA-1:cds;Parent=Msa1198540-mRNA-1 |
| chr8_1 | CDS | 50166617 | 50166670 | 50166617 | ID=Msa1198540-mRNA-1:cds;Parent=Msa1198540-mRNA-1 |
| chr8_1 | CDS | 50166337 | 50166483 | 50166337 | ID=Msa1198540-mRNA-1:cds;Parent=Msa1198540-mRNA-1 |
| chr8_1 | CDS | 50164505 | 50164882 | 50164505 | ID=Msa1198540-mRNA-1:cds;Parent=Msa1198540-mRNA-1 |
| chr8_1 | three_prime_UTR | 50164424 | 50164504 | 50164424 | ID=Msa1198540-mRNA-1:three_prime_utr;Parent=Msa1198540-mRNA-1 |
| Gene Sequence |
| Protein sequence |
