Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1210040 | XP_003609049.1 | 99.655 | 290 | 1 | 0 | 1 | 290 | 1 | 290 | 0.0 | 601 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1210040 | sp|Q9FJJ5|EB1B_ARATH | 68.914 | 267 | 77 | 2 | 1 | 264 | 1 | 264 | 2.98e-134 | 384 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0610690 | Msa1210040 | 0.803612 | 3.208644e-49 | -8.615850e-47 |
| Msa0660370 | Msa1210040 | 0.817442 | 3.291050e-52 | -8.615850e-47 |
| Msa0675120 | Msa1210040 | 0.830015 | 3.725591e-55 | -8.615850e-47 |
| Msa0831220 | Msa1210040 | 0.806297 | 8.809247e-50 | -8.615850e-47 |
| Msa0135840 | Msa1210040 | 0.802696 | 4.963258e-49 | -8.615850e-47 |
| Msa0368640 | Msa1210040 | 0.813777 | 2.155878e-51 | -8.615850e-47 |
| Msa0480280 | Msa1210040 | 0.831594 | 1.527558e-55 | -8.615850e-47 |
| Msa0982650 | Msa1210040 | 0.817158 | 3.811556e-52 | -8.615850e-47 |
| Msa1074900 | Msa1210040 | 0.802016 | 6.851588e-49 | -8.615850e-47 |
| Msa1083700 | Msa1210040 | 0.818766 | 1.651936e-52 | -8.615850e-47 |
| Msa1104110 | Msa1210040 | 0.803069 | 4.156752e-49 | -8.615850e-47 |
| Msa0281470 | Msa1210040 | 0.810035 | 1.408059e-50 | -8.615850e-47 |
| Msa0339020 | Msa1210040 | 0.814337 | 1.621696e-51 | -8.615850e-47 |
| Msa1210040 | Msa1211780 | 0.840591 | 7.927510e-58 | -8.615850e-47 |
| Msa1210040 | Msa1219930 | 0.807391 | 5.171210e-50 | -8.615850e-47 |
| Msa1210040 | Msa1259160 | 0.990147 | 2.828399e-181 | -8.615850e-47 |
| Msa1210040 | Msa1299650 | 0.991258 | 1.051041e-186 | -8.615850e-47 |
| Msa1210040 | Msa1375280 | 0.815413 | 9.364524e-52 | -8.615850e-47 |
| Msa1210040 | Msa1381260 | 0.807826 | 4.181518e-50 | -8.615850e-47 |
| Msa1210040 | Msa1449780 | 0.805345 | 1.396247e-49 | -8.615850e-47 |
| Msa1210040 | Msa1462740 | 0.801056 | 1.077864e-48 | -8.615850e-47 |
| Msa0519760 | Msa1210040 | 0.800326 | 1.519135e-48 | -8.615850e-47 |
| Msa0519810 | Msa1210040 | 0.818232 | 2.182974e-52 | -8.615850e-47 |
| Msa0519840 | Msa1210040 | 0.804984 | 1.661126e-49 | -8.615850e-47 |
| Msa0540670 | Msa1210040 | 0.835724 | 1.420278e-56 | -8.615850e-47 |
| Msa0579080 | Msa1210040 | 0.833767 | 4.413867e-56 | -8.615850e-47 |
| Msa0579160 | Msa1210040 | 0.824364 | 8.402309e-54 | -8.615850e-47 |
| Msa0579220 | Msa1210040 | 0.822342 | 2.493048e-53 | -8.615850e-47 |
| Msa0851850 | Msa1210040 | 0.824753 | 6.804194e-54 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1210040 | MtrunA17_Chr4g0060561 | 99.655 | 290 | 1 | 0 | 1 | 290 | 1 | 290 | 0.0 | 601 |
| Msa1210040 | MtrunA17_Chr3g0092651 | 76.190 | 273 | 60 | 3 | 1 | 271 | 1 | 270 | 6.88e-154 | 431 |
| Msa1210040 | MtrunA17_Chr5g0401741 | 56.071 | 280 | 105 | 4 | 1 | 266 | 1 | 276 | 3.46e-104 | 306 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1210040 | AT5G62500.1 | 68.914 | 267 | 77 | 2 | 1 | 264 | 1 | 264 | 3.03e-135 | 384 |
| Msa1210040 | AT3G47690.1 | 69.888 | 269 | 68 | 4 | 1 | 266 | 1 | 259 | 2.04e-134 | 382 |
| Msa1210040 | AT5G67270.1 | 52.574 | 272 | 108 | 3 | 1 | 255 | 1 | 268 | 6.60e-100 | 296 |
Find 79 sgRNAs with CRISPR-Local
Find 269 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACAAAACAGTTAATATATTT+TGG | 0.140591 | 8_1:-68723636 | None:intergenic |
| CCTGCAGAAGTTTGTAATTC+TGG | 0.195394 | 8_1:-68720075 | None:intergenic |
| CGTTACTGTGATTCTATTAA+TGG | 0.196750 | 8_1:+68721203 | Msa1210040:CDS |
| TCTCTTTCTTTCTGCGAAAA+TGG | 0.203212 | 8_1:+68719632 | Msa1210040:exon |
| GCCAGAATTATTCATAATAT+TGG | 0.260420 | 8_1:-68721556 | None:intergenic |
| GCGAAAATGGCGACGAATAT+AGG | 0.272527 | 8_1:+68719645 | Msa1210040:exon |
| ACCAATATTATGAATAATTC+TGG | 0.280217 | 8_1:+68721555 | Msa1210040:CDS |
| TACCAGCAAGGAGCTAGTTT+TGG | 0.281303 | 8_1:-68723350 | None:intergenic |
| ACAGGGATATCCTCCACTTC+TGG | 0.363729 | 8_1:-68722269 | None:intergenic |
| GAAGTTAGCAGGCTTGTTAA+AGG | 0.368713 | 8_1:+68721140 | Msa1210040:CDS |
| ACCTAACGTATATACCTCTT+TGG | 0.375890 | 8_1:-68721820 | None:intergenic |
| GTATAGTGGCCAAGCCATTC+AGG | 0.388153 | 8_1:+68721745 | Msa1210040:intron |
| TCAATTCTGTCTTGCAAGTC+GGG | 0.388164 | 8_1:+68723408 | Msa1210040:three_prime_UTR |
| TCCCAAAACTAGCTCCTTGC+TGG | 0.392681 | 8_1:+68723348 | Msa1210040:exon |
| CACAGTAACGTTTCAGCCAT+TGG | 0.394635 | 8_1:-68721190 | None:intergenic |
| AACGAAGATTGCTCAAGAAA+TGG | 0.395248 | 8_1:+68723602 | Msa1210040:three_prime_UTR |
| AGCTAACCAGAGGTTCTATT+AGG | 0.400370 | 8_1:-68721597 | None:intergenic |
| ACCTTAACTCTTCGCTCAAC+AGG | 0.406563 | 8_1:-68721489 | None:intergenic |
| TGGTGATCTGCACTCTCCTA+TGG | 0.407219 | 8_1:+68723431 | Msa1210040:three_prime_UTR |
| GATGCGTCACATCCATCATT+TGG | 0.413789 | 8_1:-68719904 | None:intergenic |
| TGCTGATTCCTTTGCATCAG+TGG | 0.422807 | 8_1:-68723214 | None:intergenic |
| GCTTGTTAAAGGCAGACCTT+TGG | 0.429462 | 8_1:+68721151 | Msa1210040:CDS |
| AGGCAGACCTTTGGACAACT+TGG | 0.430840 | 8_1:+68721160 | Msa1210040:CDS |
| GGCGACGAATATAGGCATAA+TGG | 0.437973 | 8_1:+68719653 | Msa1210040:CDS |
| GTGTTTGTTTCCTTGTAGCC+TGG | 0.438821 | 8_1:+68723490 | Msa1210040:three_prime_UTR |
| TCCTGTTGAGCGAAGAGTTA+AGG | 0.440147 | 8_1:+68721488 | Msa1210040:CDS |
| TTGTGGTATTCTGAATTTGT+AGG | 0.445245 | 8_1:-68719526 | None:intergenic |
| GCCAAGCCATTCAGGTCAAG+TGG | 0.449870 | 8_1:+68721753 | Msa1210040:CDS |
| GGCAGCATATTGAAGTTAGC+AGG | 0.450143 | 8_1:+68721129 | Msa1210040:intron |
| CCCACTTGACCTGAATGGCT+TGG | 0.452772 | 8_1:-68721754 | None:intergenic |
| GATATTGGTTAGGCTGCATC+TGG | 0.461979 | 8_1:+68719869 | Msa1210040:intron |
| GAAATCGAATGTGTGAAGTA+TGG | 0.463586 | 8_1:-68719551 | None:intergenic |
| GCAGGAACGAGATTCTGAAT+TGG | 0.472018 | 8_1:+68719694 | Msa1210040:CDS |
| ATGGATAGTGCATACTTTGT+CGG | 0.478923 | 8_1:+68719672 | Msa1210040:CDS |
| ATTATGAATAATTCTGGCTC+AGG | 0.480706 | 8_1:+68721561 | Msa1210040:CDS |
| CTGGGTCCTAATAGAACCTC+TGG | 0.483064 | 8_1:+68721591 | Msa1210040:CDS |
| GGTGATCTGCACTCTCCTAT+GGG | 0.489581 | 8_1:+68723432 | Msa1210040:three_prime_UTR |
| TTGTTTCCTTGTAGCCTGGA+TGG | 0.493950 | 8_1:+68723494 | Msa1210040:three_prime_UTR |
| TTCAATTCTGTCTTGCAAGT+CGG | 0.500090 | 8_1:+68723407 | Msa1210040:three_prime_UTR |
| CCAAGCCATTCAGGTCAAGT+GGG | 0.506200 | 8_1:+68721754 | Msa1210040:CDS |
| GATTCAGACTTTGTCCAAAG+AGG | 0.513628 | 8_1:+68721806 | Msa1210040:CDS |
| ACAGCATTCATAGTTTGACT+TGG | 0.516250 | 8_1:-68723297 | None:intergenic |
| CCAGAATTACAAACTTCTGC+AGG | 0.520419 | 8_1:+68720075 | Msa1210040:CDS |
| GCCATTCAGGTCAAGTGGGG+GGG | 0.520542 | 8_1:+68721758 | Msa1210040:CDS |
| GTAACAGCCACCTTGTGCAT+TGG | 0.529289 | 8_1:-68719938 | None:intergenic |
| AACGTTACGCGTTATTGTGA+GGG | 0.530029 | 8_1:+68719484 | None:intergenic |
| GATTATCCATCCAGGCTACA+AGG | 0.539788 | 8_1:-68723500 | None:intergenic |
| GAACGTTACGCGTTATTGTG+AGG | 0.540540 | 8_1:+68719483 | None:intergenic |
| AAAGAGGCTAGCAAATGTCT+TGG | 0.540733 | 8_1:-68723375 | None:intergenic |
| CAAGCCATTCAGGTCAAGTG+GGG | 0.556541 | 8_1:+68721755 | Msa1210040:CDS |
| ATGATGGATGTGACGCATCA+AGG | 0.557465 | 8_1:+68719908 | Msa1210040:CDS |
| TATCATGTGATTATCCATCC+AGG | 0.557504 | 8_1:-68723508 | None:intergenic |
| TTTGTATGCCACTGATGCAA+AGG | 0.562050 | 8_1:+68723206 | Msa1210040:CDS |
| TGATGCAAAGGAATCAGCAC+TGG | 0.562436 | 8_1:+68723218 | Msa1210040:CDS |
| AAGCCATTCAGGTCAAGTGG+GGG | 0.563374 | 8_1:+68721756 | Msa1210040:CDS |
| TGCTGTACAATGCCAAATGA+TGG | 0.564839 | 8_1:+68719892 | Msa1210040:CDS |
| CAGCATTCATAGTTTGACTT+GGG | 0.565837 | 8_1:-68723296 | None:intergenic |
| AAAAGTCTCTCTCTTTCTCA+AGG | 0.572348 | 8_1:-68722205 | None:intergenic |
| TTCTGGCTCAGGCAACACAC+TGG | 0.577044 | 8_1:+68721572 | Msa1210040:CDS |
| AGCCATTCAGGTCAAGTGGG+GGG | 0.577781 | 8_1:+68721757 | Msa1210040:CDS |
| ATAATCACATGATAAATGAC+TGG | 0.584555 | 8_1:+68723517 | Msa1210040:three_prime_UTR |
| ACATGGTGTTCTATGCCCAT+AGG | 0.592734 | 8_1:-68723447 | None:intergenic |
| ATAGTGCATACTTTGTCGGC+AGG | 0.594763 | 8_1:+68719676 | Msa1210040:CDS |
| ACAACTTGGAGTTCCTCCAA+TGG | 0.595027 | 8_1:+68721174 | Msa1210040:CDS |
| ATGTGTGAAGTATGGTATTG+TGG | 0.600595 | 8_1:-68719543 | None:intergenic |
| TACTGTGATTCTATTAATGG+CGG | 0.608916 | 8_1:+68721206 | Msa1210040:CDS |
| TCTGGCTCAGGCAACACACT+GGG | 0.611070 | 8_1:+68721573 | Msa1210040:CDS |
| ATTCTGTCTTGCAAGTCGGG+TGG | 0.613029 | 8_1:+68723411 | Msa1210040:three_prime_UTR |
| CATATGTCAGACTCCAGAAG+TGG | 0.613330 | 8_1:+68722256 | Msa1210040:CDS |
| ATGTCAGACTCCAGAAGTGG+AGG | 0.615946 | 8_1:+68722259 | Msa1210040:CDS |
| CAACAAGCTGAAAATTGACA+AGG | 0.632418 | 8_1:+68720105 | Msa1210040:CDS |
| TACTGATCTCAAATTTACAG+TGG | 0.646076 | 8_1:+68722178 | Msa1210040:CDS |
| AGGAACTCCAAGTTGTCCAA+AGG | 0.646182 | 8_1:-68721167 | None:intergenic |
| AGTAACGTTTCAGCCATTGG+AGG | 0.647456 | 8_1:-68721187 | None:intergenic |
| GTGAGAGATTGAGCTGAAGT+AGG | 0.649304 | 8_1:-68719725 | None:intergenic |
| AATGTCTTGGCATACCAGCA+AGG | 0.650422 | 8_1:-68723362 | None:intergenic |
| AGGAGTTGTTCCAATGCACA+AGG | 0.665845 | 8_1:+68719928 | Msa1210040:CDS |
| GTTGAGCGAAGAGTTAAGGT+CGG | 0.693286 | 8_1:+68721492 | Msa1210040:CDS |
| AGTCTCTCTCTTTCTCAAGG+CGG | 0.725031 | 8_1:-68722202 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATTTCTTCTTTATTATAATT+AGG | + | chr8_1:68720512-68720531 | Msa1210040:intron | 10.0% |
| !! | TAAAATTATATACAAATAAC+TGG | - | chr8_1:68721930-68721949 | None:intergenic | 10.0% |
| !!! | TTTGTATATAATTTTATATC+AGG | + | chr8_1:68721934-68721953 | Msa1210040:intron | 10.0% |
| !!! | TGAACTATAATTATTTTTTT+TGG | + | chr8_1:68722639-68722658 | Msa1210040:intron | 10.0% |
| !!! | TTATGCTTTATTTTTCTTTT+GGG | + | chr8_1:68719965-68719984 | Msa1210040:intron | 15.0% |
| !!! | TTTTTTATAATTTTGCATTG+TGG | + | chr8_1:68720005-68720024 | Msa1210040:intron | 15.0% |
| !!! | TTTTTATAATTTTGCATTGT+GGG | + | chr8_1:68720006-68720025 | Msa1210040:intron | 15.0% |
| !!! | AATCTACATTTCTTTATTTT+AGG | + | chr8_1:68720235-68720254 | Msa1210040:intron | 15.0% |
| !!! | TATTTTAAAAGATATGTGAA+TGG | - | chr8_1:68721358-68721377 | None:intergenic | 15.0% |
| !!! | GATAAAAGAAAATTTGTTAT+TGG | - | chr8_1:68722475-68722494 | None:intergenic | 15.0% |
| !!! | TAGACTGAATTATAAATTTT+AGG | + | chr8_1:68722662-68722681 | Msa1210040:intron | 15.0% |
| !!! | AGACTGAATTATAAATTTTA+GGG | + | chr8_1:68722663-68722682 | Msa1210040:intron | 15.0% |
| !!! | ACAAAACAGTTAATATATTT+TGG | - | chr8_1:68723639-68723658 | None:intergenic | 15.0% |
| !!! | GTTATGCTTTATTTTTCTTT+TGG | + | chr8_1:68719964-68719983 | Msa1210040:intron | 20.0% |
| !!! | TATGCTTTATTTTTCTTTTG+GGG | + | chr8_1:68719966-68719985 | Msa1210040:intron | 20.0% |
| !! | AAATAAGAAAGAAAGAATGT+TGG | + | chr8_1:68720174-68720193 | Msa1210040:intron | 20.0% |
| !! | AATAAGAAAGAAAGAATGTT+GGG | + | chr8_1:68720175-68720194 | Msa1210040:intron | 20.0% |
| !!! | ATTTTTATTCTTTAGCATAG+CGG | + | chr8_1:68720211-68720230 | Msa1210040:intron | 20.0% |
| !!! | TTCTTTATTTTAGGTTTCAA+TGG | + | chr8_1:68720244-68720263 | Msa1210040:intron | 20.0% |
| !! | TATGCATCAATAGAATTTAT+AGG | - | chr8_1:68720737-68720756 | None:intergenic | 20.0% |
| !!! | GGAATTTTTTATGTGTAATA+TGG | + | chr8_1:68720930-68720949 | Msa1210040:intron | 20.0% |
| !!! | TTTTGACAATATTAACTACA+CGG | - | chr8_1:68721426-68721445 | None:intergenic | 20.0% |
| !! | ACCAATATTATGAATAATTC+TGG | + | chr8_1:68721555-68721574 | Msa1210040:CDS | 20.0% |
| !! | CAAAAATTGTTATAAGCATA+TGG | - | chr8_1:68721847-68721866 | None:intergenic | 20.0% |
| !!! | CATATGCTTATAACAATTTT+TGG | + | chr8_1:68721845-68721864 | Msa1210040:intron | 20.0% |
| !!! | AAAAATTGCTTGTTCTTTTA+TGG | + | chr8_1:68722049-68722068 | Msa1210040:intron | 20.0% |
| !!! | AAAATTGCTTGTTCTTTTAT+GGG | + | chr8_1:68722050-68722069 | Msa1210040:intron | 20.0% |
| !! | TGAATTTCGTAATTTCTTTA+TGG | + | chr8_1:68722495-68722514 | Msa1210040:intron | 20.0% |
| !!! | ATAATTATAGTTCAAGTTTC+AGG | - | chr8_1:68722633-68722652 | None:intergenic | 20.0% |
| !! | AATAAATTCATTCTTAAACC+TGG | + | chr8_1:68723027-68723046 | Msa1210040:intron | 20.0% |
| !! | ATAAATTCATTCTTAAACCT+GGG | + | chr8_1:68723028-68723047 | Msa1210040:intron | 20.0% |
| !!! | AATTGAATTTGCTTAAAAAG+AGG | - | chr8_1:68723394-68723413 | None:intergenic | 20.0% |
| !!! | ATATGACAATTTTCATTACA+TGG | - | chr8_1:68723467-68723486 | None:intergenic | 20.0% |
| ! | AAAACATGCAAAAAGGATTA+GGG | - | chr8_1:68719778-68719797 | None:intergenic | 25.0% |
| ! | AAAAACATGCAAAAAGGATT+AGG | - | chr8_1:68719779-68719798 | None:intergenic | 25.0% |
| ! | ATTAGCAAAAACATGCAAAA+AGG | - | chr8_1:68719785-68719804 | None:intergenic | 25.0% |
| !! | GTTGATCTTGTTTATGATAT+TGG | + | chr8_1:68719854-68719873 | Msa1210040:intron | 25.0% |
| !! | TCTTGTTTATGATATTGGTT+AGG | + | chr8_1:68719859-68719878 | Msa1210040:intron | 25.0% |
| ! | TAGCTTATGACATATTCATA+AGG | - | chr8_1:68720390-68720409 | None:intergenic | 25.0% |
| ! | TCTATTGATGCATAATTTGA+CGG | + | chr8_1:68720743-68720762 | Msa1210040:intron | 25.0% |
| ! | GTGATGCATGATAAATATTA+GGG | - | chr8_1:68720838-68720857 | None:intergenic | 25.0% |
| ! | TACAATAGGAATTTAGAGAA+GGG | + | chr8_1:68720909-68720928 | Msa1210040:intron | 25.0% |
| !!! | ATGTGAGCTTTTTTTCTTAA+CGG | + | chr8_1:68721002-68721021 | Msa1210040:intron | 25.0% |
| ! | GATAACTTGAGATTAAAAAC+TGG | + | chr8_1:68721038-68721057 | Msa1210040:intron | 25.0% |
| ! | TGTTTATATATAGTGTCTCT+TGG | + | chr8_1:68721087-68721106 | Msa1210040:intron | 25.0% |
| ! | TATGTAGACACGTTAATAAT+TGG | - | chr8_1:68721288-68721307 | None:intergenic | 25.0% |
| !!! | CAGTGATTTTGATTTTTTCA+GGG | - | chr8_1:68721532-68721551 | None:intergenic | 25.0% |
| ! | GCCAGAATTATTCATAATAT+TGG | - | chr8_1:68721559-68721578 | None:intergenic | 25.0% |
| ! | ATTCATGTTGTAAAACCATT+AGG | - | chr8_1:68721666-68721685 | None:intergenic | 25.0% |
| ! | TAAAGAAAAGAGATGAGAAA+AGG | - | chr8_1:68721694-68721713 | None:intergenic | 25.0% |
| !!! | TCTTTATTTCCTTCTCTTTT+TGG | + | chr8_1:68721708-68721727 | Msa1210040:intron | 25.0% |
| !!! | TTGTTTTCTTTTGAGTATAG+TGG | + | chr8_1:68721731-68721750 | Msa1210040:intron | 25.0% |
| !! | AAAAGAACAAGCAATTTTTC+AGG | - | chr8_1:68722048-68722067 | None:intergenic | 25.0% |
| ! | AATTTCCCGATAAAAATATC+AGG | - | chr8_1:68722098-68722117 | None:intergenic | 25.0% |
| ! | CCTTTATTAGATTTCTTACA+GGG | - | chr8_1:68722289-68722308 | None:intergenic | 25.0% |
| ! | TAATTTCTTTATGGTTGACT+GGG | + | chr8_1:68722504-68722523 | Msa1210040:intron | 25.0% |
| !!! | TAGCATTTGTTTTGATTAGT+TGG | + | chr8_1:68722701-68722720 | Msa1210040:intron | 25.0% |
| ! | ACAAGTGATAATAATGTCAT+TGG | + | chr8_1:68722836-68722855 | Msa1210040:intron | 25.0% |
| ! | TATATAGTTGCAATTGGAAA+AGG | + | chr8_1:68722862-68722881 | Msa1210040:intron | 25.0% |
| ! | ATAATCACATGATAAATGAC+TGG | + | chr8_1:68723517-68723536 | Msa1210040:three_prime_UTR | 25.0% |
| !!! | ACAGTTAATATATTTTGGCT+AGG | - | chr8_1:68723634-68723653 | None:intergenic | 25.0% |
| TTGTGGTATTCTGAATTTGT+AGG | - | chr8_1:68719529-68719548 | None:intergenic | 30.0% | |
| !!! | TGCATTGTGGGTTTTATTAT+AGG | + | chr8_1:68720018-68720037 | Msa1210040:intron | 30.0% |
| AATGGAATGATTGAACACTT+GGG | + | chr8_1:68720262-68720281 | Msa1210040:intron | 30.0% | |
| !! | GCTGTTTTCATAAACTATCA+TGG | + | chr8_1:68720337-68720356 | Msa1210040:intron | 30.0% |
| TATTAAACGCTTGTTTCGAT+TGG | - | chr8_1:68720475-68720494 | None:intergenic | 30.0% | |
| AGCGTTTAATATCACATCAA+AGG | + | chr8_1:68720484-68720503 | Msa1210040:intron | 30.0% | |
| TGAATCTCATCTCATTAGTT+AGG | + | chr8_1:68720579-68720598 | Msa1210040:intron | 30.0% | |
| GGTGATGCATGATAAATATT+AGG | - | chr8_1:68720839-68720858 | None:intergenic | 30.0% | |
| TATTGGGGAATTATCTCTTT+AGG | + | chr8_1:68720871-68720890 | Msa1210040:intron | 30.0% | |
| AATTATCTCTTTAGGCAAGT+TGG | + | chr8_1:68720879-68720898 | Msa1210040:intron | 30.0% | |
| CTACAATAGGAATTTAGAGA+AGG | + | chr8_1:68720908-68720927 | Msa1210040:intron | 30.0% | |
| !! | ATGCTCAATCTCATTTTGAT+TGG | + | chr8_1:68720958-68720977 | Msa1210040:intron | 30.0% |
| !!! | TCAATCTCATTTTGATTGGT+AGG | + | chr8_1:68720962-68720981 | Msa1210040:intron | 30.0% |
| CGTTACTGTGATTCTATTAA+TGG | + | chr8_1:68721203-68721222 | Msa1210040:CDS | 30.0% | |
| TACTGTGATTCTATTAATGG+CGG | + | chr8_1:68721206-68721225 | Msa1210040:CDS | 30.0% | |
| !!! | TTGATTTTTTCAGGGAACTT+CGG | - | chr8_1:68721524-68721543 | None:intergenic | 30.0% |
| !!! | GCAGTGATTTTGATTTTTTC+AGG | - | chr8_1:68721533-68721552 | None:intergenic | 30.0% |
| !! | ATTATGAATAATTCTGGCTC+AGG | + | chr8_1:68721561-68721580 | Msa1210040:CDS | 30.0% |
| ! | ATGTTCAACATTTTGCCTAA+TGG | + | chr8_1:68721648-68721667 | Msa1210040:intron | 30.0% |
| AAAAGAGATGAGAAAAGGAA+AGG | - | chr8_1:68721689-68721708 | None:intergenic | 30.0% | |
| AGAAAACAACCAAAAAGAGA+AGG | - | chr8_1:68721720-68721739 | None:intergenic | 30.0% | |
| !! | GTACCACCTGATATTTTTAT+CGG | + | chr8_1:68722089-68722108 | Msa1210040:intron | 30.0% |
| !! | TACCACCTGATATTTTTATC+GGG | + | chr8_1:68722090-68722109 | Msa1210040:intron | 30.0% |
| AAGAGTAAAGAAGGGAATAA+CGG | - | chr8_1:68722138-68722157 | None:intergenic | 30.0% | |
| TACTGATCTCAAATTTACAG+TGG | + | chr8_1:68722178-68722197 | Msa1210040:CDS | 30.0% | |
| ! | ACTTTTACTTCGCAAAACTA+CGG | + | chr8_1:68722222-68722241 | Msa1210040:CDS | 30.0% |
| CCCTGTAAGAAATCTAATAA+AGG | + | chr8_1:68722286-68722305 | Msa1210040:intron | 30.0% | |
| GCCTTTATTAGATTTCTTAC+AGG | - | chr8_1:68722290-68722309 | None:intergenic | 30.0% | |
| GTAATTTCTTTATGGTTGAC+TGG | + | chr8_1:68722503-68722522 | Msa1210040:intron | 30.0% | |
| AATTTCTTTATGGTTGACTG+GGG | + | chr8_1:68722505-68722524 | Msa1210040:intron | 30.0% | |
| !! | AACTTTTTGAGCAAAAACTC+TGG | - | chr8_1:68722554-68722573 | None:intergenic | 30.0% |
| ! | GTTTTTGCTCAAAAAGTTGA+TGG | + | chr8_1:68722556-68722575 | Msa1210040:intron | 30.0% |
| !!! | CATTTGTTTTGATTAGTTGG+AGG | + | chr8_1:68722704-68722723 | Msa1210040:intron | 30.0% |
| AGCAGAATAATTGAACATAG+AGG | + | chr8_1:68722729-68722748 | Msa1210040:intron | 30.0% | |
| TAGATCTAGATAATGTGTAC+TGG | - | chr8_1:68722786-68722805 | None:intergenic | 30.0% | |
| TGGATCTATATAGTTGCAAT+TGG | + | chr8_1:68722856-68722875 | Msa1210040:intron | 30.0% | |
| !!! | TTGGTGACTTTTGTTTTCTT+TGG | + | chr8_1:68722887-68722906 | Msa1210040:intron | 30.0% |
| ATGTGTGAAGTATGGTATTG+TGG | - | chr8_1:68719546-68719565 | None:intergenic | 35.0% | |
| GAAATCGAATGTGTGAAGTA+TGG | - | chr8_1:68719554-68719573 | None:intergenic | 35.0% | |
| TCTCTTTCTTTCTGCGAAAA+TGG | + | chr8_1:68719632-68719651 | Msa1210040:exon | 35.0% | |
| ATGGATAGTGCATACTTTGT+CGG | + | chr8_1:68719672-68719691 | Msa1210040:CDS | 35.0% | |
| TGCAAAAAGGATTAGGGTTA+GGG | - | chr8_1:68719772-68719791 | None:intergenic | 35.0% | |
| ATGCAAAAAGGATTAGGGTT+AGG | - | chr8_1:68719773-68719792 | None:intergenic | 35.0% | |
| CAACAAGCTGAAAATTGACA+AGG | + | chr8_1:68720105-68720124 | Msa1210040:CDS | 35.0% | |
| CAATGGAATGATTGAACACT+TGG | + | chr8_1:68720261-68720280 | Msa1210040:intron | 35.0% | |
| ! | GCTTATTTGAGTTTATCCTC+TGG | - | chr8_1:68720453-68720472 | None:intergenic | 35.0% |
| GAAGCATAGTGGTATGTTAT+AGG | - | chr8_1:68720619-68720638 | None:intergenic | 35.0% | |
| ! | TGAAAAAAGAGGAAGCATAG+TGG | - | chr8_1:68720630-68720649 | None:intergenic | 35.0% |
| !!! | TGCTTCCTCTTTTTTCAACT+CGG | + | chr8_1:68720633-68720652 | Msa1210040:intron | 35.0% |
| TCACCAGCATACTCTAATAT+TGG | + | chr8_1:68720854-68720873 | Msa1210040:intron | 35.0% | |
| CACCAGCATACTCTAATATT+GGG | + | chr8_1:68720855-68720874 | Msa1210040:intron | 35.0% | |
| ACCAGCATACTCTAATATTG+GGG | + | chr8_1:68720856-68720875 | Msa1210040:intron | 35.0% | |
| CACTGAGAAATATGAATGCA+TGG | - | chr8_1:68721401-68721420 | None:intergenic | 35.0% | |
| AGGCAAAATGTTGAACATCT+TGG | - | chr8_1:68721646-68721665 | None:intergenic | 35.0% | |
| ! | TCCAAAGAGGTATATACGTT+AGG | + | chr8_1:68721819-68721838 | Msa1210040:intron | 35.0% |
| ACCTAACGTATATACCTCTT+TGG | - | chr8_1:68721823-68721842 | None:intergenic | 35.0% | |
| TAACACTTCATGGACTTCTT+AGG | - | chr8_1:68721885-68721904 | None:intergenic | 35.0% | |
| TGACATATTGTATACCACAG+GGG | - | chr8_1:68722004-68722023 | None:intergenic | 35.0% | |
| CTGACATATTGTATACCACA+GGG | - | chr8_1:68722005-68722024 | None:intergenic | 35.0% | |
| ACTGACATATTGTATACCAC+AGG | - | chr8_1:68722006-68722025 | None:intergenic | 35.0% | |
| TTCCCGATAAAAATATCAGG+TGG | - | chr8_1:68722095-68722114 | None:intergenic | 35.0% | |
| AGATCAGTAATCTGTGAAAC+AGG | - | chr8_1:68722167-68722186 | None:intergenic | 35.0% | |
| AAAAGTCTCTCTCTTTCTCA+AGG | - | chr8_1:68722208-68722227 | None:intergenic | 35.0% | |
| ! | CTTTTACTTCGCAAAACTAC+GGG | + | chr8_1:68722223-68722242 | Msa1210040:CDS | 35.0% |
| GAATCAGAGATTACATCACA+CGG | - | chr8_1:68722377-68722396 | None:intergenic | 35.0% | |
| !! | TTTTTGAGCAAAAACTCTGG+CGG | - | chr8_1:68722551-68722570 | None:intergenic | 35.0% |
| TTGACATGGATCTTGTTAAG+TGG | + | chr8_1:68722587-68722606 | Msa1210040:intron | 35.0% | |
| ATGGATCTTGTTAAGTGGAT+GGG | + | chr8_1:68722592-68722611 | Msa1210040:intron | 35.0% | |
| ! | CTGTTTCTTTAACCATCACA+AGG | + | chr8_1:68722925-68722944 | Msa1210040:intron | 35.0% |
| ATTCATTCTTAAACCTGGGT+TGG | + | chr8_1:68723032-68723051 | Msa1210040:intron | 35.0% | |
| ! | AGCTTGACTTTTACACTGAT+GGG | - | chr8_1:68723102-68723121 | None:intergenic | 35.0% |
| TTGTTACATGTTCTCTATGC+AGG | + | chr8_1:68723161-68723180 | Msa1210040:intron | 35.0% | |
| ! | CAGCATTCATAGTTTGACTT+GGG | - | chr8_1:68723299-68723318 | None:intergenic | 35.0% |
| ACAGCATTCATAGTTTGACT+TGG | - | chr8_1:68723300-68723319 | None:intergenic | 35.0% | |
| TTCAATTCTGTCTTGCAAGT+CGG | + | chr8_1:68723407-68723426 | Msa1210040:three_prime_UTR | 35.0% | |
| TATCATGTGATTATCCATCC+AGG | - | chr8_1:68723511-68723530 | None:intergenic | 35.0% | |
| AACGAAGATTGCTCAAGAAA+TGG | + | chr8_1:68723602-68723621 | Msa1210040:three_prime_UTR | 35.0% | |
| GCAAAAAGGATTAGGGTTAG+GGG | - | chr8_1:68719771-68719790 | None:intergenic | 40.0% | |
| TGCTGTACAATGCCAAATGA+TGG | + | chr8_1:68719892-68719911 | Msa1210040:CDS | 40.0% | |
| CCTGCAGAAGTTTGTAATTC+TGG | - | chr8_1:68720078-68720097 | None:intergenic | 40.0% | |
| CCAGAATTACAAACTTCTGC+AGG | + | chr8_1:68720075-68720094 | Msa1210040:CDS | 40.0% | |
| AACACTTGGGTCATGTAACA+CGG | + | chr8_1:68720275-68720294 | Msa1210040:intron | 40.0% | |
| AAGCACTTGTGACACTCTTT+GGG | - | chr8_1:68720427-68720446 | None:intergenic | 40.0% | |
| TAAGCACTTGTGACACTCTT+TGG | - | chr8_1:68720428-68720447 | None:intergenic | 40.0% | |
| ! | GGATACCGAGTTGAAAAAAG+AGG | - | chr8_1:68720641-68720660 | None:intergenic | 40.0% |
| GTATCCGATTGCTCTGATTT+GGG | + | chr8_1:68720655-68720674 | Msa1210040:intron | 40.0% | |
| ! | TATCCGATTGCTCTGATTTG+GGG | + | chr8_1:68720656-68720675 | Msa1210040:intron | 40.0% |
| ATTTGGGGACATGTGAAGTA+TGG | + | chr8_1:68720671-68720690 | Msa1210040:intron | 40.0% | |
| TTTGGGGACATGTGAAGTAT+GGG | + | chr8_1:68720672-68720691 | Msa1210040:intron | 40.0% | |
| GAGAAACACACTATTGACGA+TGG | - | chr8_1:68720710-68720729 | None:intergenic | 40.0% | |
| CGTCAATAGTGTGTTTCTCA+AGG | + | chr8_1:68720711-68720730 | Msa1210040:intron | 40.0% | |
| TCCCCAATATTAGAGTATGC+TGG | - | chr8_1:68720860-68720879 | None:intergenic | 40.0% | |
| AAGTTGGCTAAGGCTACAAT+AGG | + | chr8_1:68720895-68720914 | Msa1210040:intron | 40.0% | |
| GGCTTAACGTGACTATCATT+TGG | + | chr8_1:68721108-68721127 | Msa1210040:intron | 40.0% | |
| !! | GAAGTTAGCAGGCTTGTTAA+AGG | + | chr8_1:68721140-68721159 | Msa1210040:CDS | 40.0% |
| AGCTAACCAGAGGTTCTATT+AGG | - | chr8_1:68721600-68721619 | None:intergenic | 40.0% | |
| AAGAACTAGAAGCTAACCAG+AGG | - | chr8_1:68721610-68721629 | None:intergenic | 40.0% | |
| !! | TCTGGTTAGCTTCTAGTTCT+TGG | + | chr8_1:68721609-68721628 | Msa1210040:intron | 40.0% |
| GATTCAGACTTTGTCCAAAG+AGG | + | chr8_1:68721806-68721825 | Msa1210040:CDS | 40.0% | |
| ! | GTCCATGAAGTGTTACCAAA+CGG | + | chr8_1:68721890-68721909 | Msa1210040:intron | 40.0% |
| GAAACAGAATTTGCACCGTT+TGG | - | chr8_1:68721908-68721927 | None:intergenic | 40.0% | |
| !! | ATCAGGTGGTACAGTTTTAG+TGG | - | chr8_1:68722081-68722100 | None:intergenic | 40.0% |
| !! | GGAATAACGGACAAACAATG+AGG | - | chr8_1:68722125-68722144 | None:intergenic | 40.0% |
| GGAGACGAAAGAGTAAAGAA+GGG | - | chr8_1:68722146-68722165 | None:intergenic | 40.0% | |
| AGGAGACGAAAGAGTAAAGA+AGG | - | chr8_1:68722147-68722166 | None:intergenic | 40.0% | |
| CACGGAACAAGAGTCAAATT+AGG | - | chr8_1:68722359-68722378 | None:intergenic | 40.0% | |
| AAGACTTATCCCACTAAGTG+GGG | - | chr8_1:68722429-68722448 | None:intergenic | 40.0% | |
| CAAGACTTATCCCACTAAGT+GGG | - | chr8_1:68722430-68722449 | None:intergenic | 40.0% | |
| !! | TGATGGTTCTGACATTGACA+TGG | + | chr8_1:68722573-68722592 | Msa1210040:intron | 40.0% |
| CATGGATCTTGTTAAGTGGA+TGG | + | chr8_1:68722591-68722610 | Msa1210040:intron | 40.0% | |
| ATCTTGTTAAGTGGATGGGA+TGG | + | chr8_1:68722596-68722615 | Msa1210040:intron | 40.0% | |
| TCTTGTTAAGTGGATGGGAT+GGG | + | chr8_1:68722597-68722616 | Msa1210040:intron | 40.0% | |
| GTTGCAATTGGAAAAGGCTT+TGG | + | chr8_1:68722868-68722887 | Msa1210040:intron | 40.0% | |
| CAGAGTTACAATCCTTGTGA+TGG | - | chr8_1:68722940-68722959 | None:intergenic | 40.0% | |
| CATCACAAGGATTGTAACTC+TGG | + | chr8_1:68722938-68722957 | Msa1210040:intron | 40.0% | |
| !!! | CCACGTTCTGAAGGTATTTT+GGG | - | chr8_1:68723061-68723080 | None:intergenic | 40.0% |
| !!! | ACCACGTTCTGAAGGTATTT+TGG | - | chr8_1:68723062-68723081 | None:intergenic | 40.0% |
| ! | CAGCTTGACTTTTACACTGA+TGG | - | chr8_1:68723103-68723122 | None:intergenic | 40.0% |
| TTTGTATGCCACTGATGCAA+AGG | + | chr8_1:68723206-68723225 | Msa1210040:CDS | 40.0% | |
| AAAGAGGCTAGCAAATGTCT+TGG | - | chr8_1:68723378-68723397 | None:intergenic | 40.0% | |
| TCAATTCTGTCTTGCAAGTC+GGG | + | chr8_1:68723408-68723427 | Msa1210040:three_prime_UTR | 40.0% | |
| GCGAAAATGGCGACGAATAT+AGG | + | chr8_1:68719645-68719664 | Msa1210040:exon | 45.0% | |
| GGCGACGAATATAGGCATAA+TGG | + | chr8_1:68719653-68719672 | Msa1210040:CDS | 45.0% | |
| ATAGTGCATACTTTGTCGGC+AGG | + | chr8_1:68719676-68719695 | Msa1210040:CDS | 45.0% | |
| GCAGGAACGAGATTCTGAAT+TGG | + | chr8_1:68719694-68719713 | Msa1210040:CDS | 45.0% | |
| GTGAGAGATTGAGCTGAAGT+AGG | - | chr8_1:68719728-68719747 | None:intergenic | 45.0% | |
| AAGGATTAGGGTTAGGGGTT+TGG | - | chr8_1:68719766-68719785 | None:intergenic | 45.0% | |
| ! | GATATTGGTTAGGCTGCATC+TGG | + | chr8_1:68719869-68719888 | Msa1210040:intron | 45.0% |
| GATGCGTCACATCCATCATT+TGG | - | chr8_1:68719907-68719926 | None:intergenic | 45.0% | |
| !! | ATGATGGATGTGACGCATCA+AGG | + | chr8_1:68719908-68719927 | Msa1210040:CDS | 45.0% |
| AGGAGTTGTTCCAATGCACA+AGG | + | chr8_1:68719928-68719947 | Msa1210040:CDS | 45.0% | |
| AGTTGTTCCAATGCACAAGG+TGG | + | chr8_1:68719931-68719950 | Msa1210040:intron | 45.0% | |
| ACACTTGGGTCATGTAACAC+GGG | + | chr8_1:68720276-68720295 | Msa1210040:intron | 45.0% | |
| GGTATCCGATTGCTCTGATT+TGG | + | chr8_1:68720654-68720673 | Msa1210040:intron | 45.0% | |
| TGTCCCCAAATCAGAGCAAT+CGG | - | chr8_1:68720662-68720681 | None:intergenic | 45.0% | |
| CACTATTGACGATGGAAGCA+TGG | - | chr8_1:68720702-68720721 | None:intergenic | 45.0% | |
| ATGAACGAGGTTGTGGAACA+AGG | - | chr8_1:68720811-68720830 | None:intergenic | 45.0% | |
| ATATTAGGGCTGCATGAACG+AGG | - | chr8_1:68720824-68720843 | None:intergenic | 45.0% | |
| ! | CTCTTTAGGCAAGTTGGCTA+AGG | + | chr8_1:68720885-68720904 | Msa1210040:intron | 45.0% |
| GGCAGCATATTGAAGTTAGC+AGG | + | chr8_1:68721129-68721148 | Msa1210040:intron | 45.0% | |
| ! | GCTTGTTAAAGGCAGACCTT+TGG | + | chr8_1:68721151-68721170 | Msa1210040:CDS | 45.0% |
| AGGAACTCCAAGTTGTCCAA+AGG | - | chr8_1:68721170-68721189 | None:intergenic | 45.0% | |
| ACAACTTGGAGTTCCTCCAA+TGG | + | chr8_1:68721174-68721193 | Msa1210040:CDS | 45.0% | |
| AGTAACGTTTCAGCCATTGG+AGG | - | chr8_1:68721190-68721209 | None:intergenic | 45.0% | |
| CACAGTAACGTTTCAGCCAT+TGG | - | chr8_1:68721193-68721212 | None:intergenic | 45.0% | |
| TCCTGTTGAGCGAAGAGTTA+AGG | + | chr8_1:68721488-68721507 | Msa1210040:CDS | 45.0% | |
| ACCTTAACTCTTCGCTCAAC+AGG | - | chr8_1:68721492-68721511 | None:intergenic | 45.0% | |
| GTTGAGCGAAGAGTTAAGGT+CGG | + | chr8_1:68721492-68721511 | Msa1210040:CDS | 45.0% | |
| !! | GGTTAGCTTCTAGTTCTTGG+TGG | + | chr8_1:68721612-68721631 | Msa1210040:intron | 45.0% |
| ! | CACCGTTTGGTAACACTTCA+TGG | - | chr8_1:68721895-68721914 | None:intergenic | 45.0% |
| AGTCTCTCTCTTTCTCAAGG+CGG | - | chr8_1:68722205-68722224 | None:intergenic | 45.0% | |
| CATATGTCAGACTCCAGAAG+TGG | + | chr8_1:68722256-68722275 | Msa1210040:CDS | 45.0% | |
| CCAAGACTTATCCCACTAAG+TGG | - | chr8_1:68722431-68722450 | None:intergenic | 45.0% | |
| CCACTTAGTGGGATAAGTCT+TGG | + | chr8_1:68722428-68722447 | Msa1210040:intron | 45.0% | |
| TCTTTATGGTTGACTGGGGA+TGG | + | chr8_1:68722509-68722528 | Msa1210040:intron | 45.0% | |
| CTTTATGGTTGACTGGGGAT+GGG | + | chr8_1:68722510-68722529 | Msa1210040:intron | 45.0% | |
| CTTGTTAAGTGGATGGGATG+GGG | + | chr8_1:68722598-68722617 | Msa1210040:intron | 45.0% | |
| !!! | GTATTTTGGGTTACCAACCC+AGG | - | chr8_1:68723048-68723067 | None:intergenic | 45.0% |
| CCCAAAATACCTTCAGAACG+TGG | + | chr8_1:68723058-68723077 | Msa1210040:intron | 45.0% | |
| TATGACTGACCACGTTCTGA+AGG | - | chr8_1:68723070-68723089 | None:intergenic | 45.0% | |
| !! | TGCTGATTCCTTTGCATCAG+TGG | - | chr8_1:68723217-68723236 | None:intergenic | 45.0% |
| TGATGCAAAGGAATCAGCAC+TGG | + | chr8_1:68723218-68723237 | Msa1210040:CDS | 45.0% | |
| !!! | ACCAGCAAGGAGCTAGTTTT+GGG | - | chr8_1:68723352-68723371 | None:intergenic | 45.0% |
| !! | TACCAGCAAGGAGCTAGTTT+TGG | - | chr8_1:68723353-68723372 | None:intergenic | 45.0% |
| AATGTCTTGGCATACCAGCA+AGG | - | chr8_1:68723365-68723384 | None:intergenic | 45.0% | |
| ACATGGTGTTCTATGCCCAT+AGG | - | chr8_1:68723450-68723469 | None:intergenic | 45.0% | |
| GTGTTTGTTTCCTTGTAGCC+TGG | + | chr8_1:68723490-68723509 | Msa1210040:three_prime_UTR | 45.0% | |
| TTGTTTCCTTGTAGCCTGGA+TGG | + | chr8_1:68723494-68723513 | Msa1210040:three_prime_UTR | 45.0% | |
| GATTATCCATCCAGGCTACA+AGG | - | chr8_1:68723503-68723522 | None:intergenic | 45.0% | |
| !!! | TATTTTTATTTTTATTTTGT+AGG | + | chr8_1:68721457-68721476 | Msa1210040:intron | 5.0% |
| GTAACAGCCACCTTGTGCAT+TGG | - | chr8_1:68719941-68719960 | None:intergenic | 50.0% | |
| GTCACAAGTGCTTATGCCAG+AGG | + | chr8_1:68720434-68720453 | Msa1210040:intron | 50.0% | |
| ! | ATTGACGATGGAAGCATGGC+TGG | - | chr8_1:68720698-68720717 | None:intergenic | 50.0% |
| AGGCAGACCTTTGGACAACT+TGG | + | chr8_1:68721160-68721179 | Msa1210040:CDS | 50.0% | |
| CTGGGTCCTAATAGAACCTC+TGG | + | chr8_1:68721591-68721610 | Msa1210040:CDS | 50.0% | |
| GTATAGTGGCCAAGCCATTC+AGG | + | chr8_1:68721745-68721764 | Msa1210040:intron | 50.0% | |
| CCAAGCCATTCAGGTCAAGT+GGG | + | chr8_1:68721754-68721773 | Msa1210040:CDS | 50.0% | |
| CAAGCCATTCAGGTCAAGTG+GGG | + | chr8_1:68721755-68721774 | Msa1210040:CDS | 50.0% | |
| AAGCCATTCAGGTCAAGTGG+GGG | + | chr8_1:68721756-68721775 | Msa1210040:CDS | 50.0% | |
| !! | TATACCACAGGGGAGCATCA+GGG | - | chr8_1:68721994-68722013 | None:intergenic | 50.0% |
| ATGTCAGACTCCAGAAGTGG+AGG | + | chr8_1:68722259-68722278 | Msa1210040:CDS | 50.0% | |
| ACAGGGATATCCTCCACTTC+TGG | - | chr8_1:68722272-68722291 | None:intergenic | 50.0% | |
| CTTATCCCACTAAGTGGGGT+CGG | - | chr8_1:68722425-68722444 | None:intergenic | 50.0% | |
| TAAGTGGATGGGATGGGGAA+TGG | + | chr8_1:68722603-68722622 | Msa1210040:intron | 50.0% | |
| TCCCAAAACTAGCTCCTTGC+TGG | + | chr8_1:68723348-68723367 | Msa1210040:exon | 50.0% | |
| ATTCTGTCTTGCAAGTCGGG+TGG | + | chr8_1:68723411-68723430 | Msa1210040:three_prime_UTR | 50.0% | |
| TGGTGATCTGCACTCTCCTA+TGG | + | chr8_1:68723431-68723450 | Msa1210040:three_prime_UTR | 50.0% | |
| GGTGATCTGCACTCTCCTAT+GGG | + | chr8_1:68723432-68723451 | Msa1210040:three_prime_UTR | 50.0% | |
| GCGAAGAGTTAAGGTCGGCA+AGG | + | chr8_1:68721497-68721516 | Msa1210040:CDS | 55.0% | |
| !! | TTCTGGCTCAGGCAACACAC+TGG | + | chr8_1:68721572-68721591 | Msa1210040:CDS | 55.0% |
| ! | TCTGGCTCAGGCAACACACT+GGG | + | chr8_1:68721573-68721592 | Msa1210040:CDS | 55.0% |
| GCCAAGCCATTCAGGTCAAG+TGG | + | chr8_1:68721753-68721772 | Msa1210040:CDS | 55.0% | |
| CCCACTTGACCTGAATGGCT+TGG | - | chr8_1:68721757-68721776 | None:intergenic | 55.0% | |
| AGCCATTCAGGTCAAGTGGG+GGG | + | chr8_1:68721757-68721776 | Msa1210040:CDS | 55.0% | |
| ATTTCCCTGATGCTCCCCTG+TGG | + | chr8_1:68721987-68722006 | Msa1210040:intron | 55.0% | |
| !! | GTATACCACAGGGGAGCATC+AGG | - | chr8_1:68721995-68722014 | None:intergenic | 55.0% |
| ! | TGGGGTCGGCTCAACACTAT+TGG | - | chr8_1:68722411-68722430 | None:intergenic | 55.0% |
| TTGAGCCGACCCCACTTAGT+GGG | + | chr8_1:68722417-68722436 | Msa1210040:intron | 55.0% | |
| ATGGTTGACTGGGGATGGGA+CGG | + | chr8_1:68722514-68722533 | Msa1210040:intron | 55.0% | |
| GGGCTGCATGAACGAGGTTG+TGG | - | chr8_1:68720818-68720837 | None:intergenic | 60.0% | |
| GCCATTCAGGTCAAGTGGGG+GGG | + | chr8_1:68721758-68721777 | Msa1210040:CDS | 60.0% | |
| GTTGAGCCGACCCCACTTAG+TGG | + | chr8_1:68722416-68722435 | Msa1210040:intron | 60.0% | |
| TGGTTGACTGGGGATGGGAC+GGG | + | chr8_1:68722515-68722534 | Msa1210040:intron | 60.0% | |
| GCCCCCCCACTTGACCTGAA+TGG | - | chr8_1:68721762-68721781 | None:intergenic | 65.0% | |
| TTCAGGTCAAGTGGGGGGGC+AGG | + | chr8_1:68721762-68721781 | Msa1210040:CDS | 65.0% | |
| AGGTCAAGTGGGGGGGCAGG+TGG | + | chr8_1:68721765-68721784 | Msa1210040:CDS | 70.0% | |
| GGTCAAGTGGGGGGGCAGGT+GGG | + | chr8_1:68721766-68721785 | Msa1210040:CDS | 70.0% | |
| GTCAAGTGGGGGGGCAGGTG+GGG | + | chr8_1:68721767-68721786 | Msa1210040:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_1 | gene | 68719487 | 68723683 | 68719487 | ID=Msa1210040;Name=Msa1210040 |
| chr8_1 | mRNA | 68719487 | 68723683 | 68719487 | ID=Msa1210040-mRNA-1;Parent=Msa1210040;Name=Msa1210040-mRNA-1;_AED=0.11;_eAED=0.11;_QI=164|1|1|1|1|1|8|324|290 |
| chr8_1 | exon | 68719487 | 68719758 | 68719487 | ID=Msa1210040-mRNA-1:exon:22893;Parent=Msa1210040-mRNA-1 |
| chr8_1 | exon | 68719881 | 68719949 | 68719881 | ID=Msa1210040-mRNA-1:exon:22894;Parent=Msa1210040-mRNA-1 |
| chr8_1 | exon | 68720040 | 68720126 | 68720040 | ID=Msa1210040-mRNA-1:exon:22895;Parent=Msa1210040-mRNA-1 |
| chr8_1 | exon | 68721134 | 68721240 | 68721134 | ID=Msa1210040-mRNA-1:exon:22896;Parent=Msa1210040-mRNA-1 |
| chr8_1 | exon | 68721479 | 68721612 | 68721479 | ID=Msa1210040-mRNA-1:exon:22897;Parent=Msa1210040-mRNA-1 |
| chr8_1 | exon | 68721751 | 68721827 | 68721751 | ID=Msa1210040-mRNA-1:exon:22898;Parent=Msa1210040-mRNA-1 |
| chr8_1 | exon | 68722176 | 68722289 | 68722176 | ID=Msa1210040-mRNA-1:exon:22899;Parent=Msa1210040-mRNA-1 |
| chr8_1 | exon | 68723183 | 68723683 | 68723183 | ID=Msa1210040-mRNA-1:exon:22900;Parent=Msa1210040-mRNA-1 |
| chr8_1 | five_prime_UTR | 68719487 | 68719650 | 68719487 | ID=Msa1210040-mRNA-1:five_prime_utr;Parent=Msa1210040-mRNA-1 |
| chr8_1 | CDS | 68719651 | 68719758 | 68719651 | ID=Msa1210040-mRNA-1:cds;Parent=Msa1210040-mRNA-1 |
| chr8_1 | CDS | 68719881 | 68719949 | 68719881 | ID=Msa1210040-mRNA-1:cds;Parent=Msa1210040-mRNA-1 |
| chr8_1 | CDS | 68720040 | 68720126 | 68720040 | ID=Msa1210040-mRNA-1:cds;Parent=Msa1210040-mRNA-1 |
| chr8_1 | CDS | 68721134 | 68721240 | 68721134 | ID=Msa1210040-mRNA-1:cds;Parent=Msa1210040-mRNA-1 |
| chr8_1 | CDS | 68721479 | 68721612 | 68721479 | ID=Msa1210040-mRNA-1:cds;Parent=Msa1210040-mRNA-1 |
| chr8_1 | CDS | 68721751 | 68721827 | 68721751 | ID=Msa1210040-mRNA-1:cds;Parent=Msa1210040-mRNA-1 |
| chr8_1 | CDS | 68722176 | 68722289 | 68722176 | ID=Msa1210040-mRNA-1:cds;Parent=Msa1210040-mRNA-1 |
| chr8_1 | CDS | 68723183 | 68723359 | 68723183 | ID=Msa1210040-mRNA-1:cds;Parent=Msa1210040-mRNA-1 |
| chr8_1 | three_prime_UTR | 68723360 | 68723683 | 68723360 | ID=Msa1210040-mRNA-1:three_prime_utr;Parent=Msa1210040-mRNA-1 |
| Gene Sequence |
| Protein sequence |
