Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1259160 | XP_003609049.1 | 99.655 | 290 | 1 | 0 | 1 | 290 | 1 | 290 | 0.0 | 601 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1259160 | sp|Q9FJJ5|EB1B_ARATH | 68.914 | 267 | 77 | 2 | 1 | 264 | 1 | 264 | 2.98e-134 | 384 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1259160 | G7JQX9 | 99.655 | 290 | 1 | 0 | 1 | 290 | 1 | 290 | 0.0 | 601 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0660370 | Msa1259160 | 0.807782 | 4.272718e-50 | -8.615850e-47 |
| Msa0675120 | Msa1259160 | 0.828553 | 8.435068e-55 | -8.615850e-47 |
| Msa0700120 | Msa1259160 | 0.808355 | 3.226275e-50 | -8.615850e-47 |
| Msa0831220 | Msa1259160 | 0.809895 | 1.509104e-50 | -8.615850e-47 |
| Msa0124910 | Msa1259160 | 0.800354 | 1.499448e-48 | -8.615850e-47 |
| Msa0135840 | Msa1259160 | 0.810888 | 9.215233e-51 | -8.615850e-47 |
| Msa0231630 | Msa1259160 | 0.802613 | 5.163167e-49 | -8.615850e-47 |
| Msa1259160 | Msa1299650 | 0.998008 | 5.500126e-254 | -8.615850e-47 |
| Msa1259160 | Msa1375280 | 0.805782 | 1.130611e-49 | -8.615850e-47 |
| Msa1259160 | Msa1381260 | 0.803447 | 3.471618e-49 | -8.615850e-47 |
| Msa1259160 | Msa1449780 | 0.804563 | 2.034616e-49 | -8.615850e-47 |
| Msa1259160 | Msa1462740 | 0.802220 | 6.220963e-49 | -8.615850e-47 |
| Msa0368640 | Msa1259160 | 0.829576 | 4.766285e-55 | -8.615850e-47 |
| Msa0480280 | Msa1259160 | 0.846112 | 2.664362e-59 | -8.615850e-47 |
| Msa0982650 | Msa1259160 | 0.810917 | 9.083117e-51 | -8.615850e-47 |
| Msa1083700 | Msa1259160 | 0.810685 | 1.019473e-50 | -8.615850e-47 |
| Msa1104110 | Msa1259160 | 0.805430 | 1.339845e-49 | -8.615850e-47 |
| Msa0281470 | Msa1259160 | 0.800934 | 1.141664e-48 | -8.615850e-47 |
| Msa0339020 | Msa1259160 | 0.808121 | 3.619301e-50 | -8.615850e-47 |
| Msa1112890 | Msa1259160 | 0.808314 | 3.291143e-50 | -8.615850e-47 |
| Msa1147700 | Msa1259160 | 0.800750 | 1.244754e-48 | -8.615850e-47 |
| Msa1210040 | Msa1259160 | 0.990147 | 2.828399e-181 | -8.615850e-47 |
| Msa1211780 | Msa1259160 | 0.836845 | 7.368242e-57 | -8.615850e-47 |
| Msa1219930 | Msa1259160 | 0.808845 | 2.535531e-50 | -8.615850e-47 |
| Msa0519810 | Msa1259160 | 0.811095 | 8.307911e-51 | -8.615850e-47 |
| Msa0540670 | Msa1259160 | 0.836212 | 1.068388e-56 | -8.615850e-47 |
| Msa0579080 | Msa1259160 | 0.833953 | 3.964573e-56 | -8.615850e-47 |
| Msa0579160 | Msa1259160 | 0.818210 | 2.207465e-52 | -8.615850e-47 |
| Msa0579220 | Msa1259160 | 0.816768 | 4.664220e-52 | -8.615850e-47 |
| Msa0851850 | Msa1259160 | 0.814804 | 1.278684e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1259160 | MtrunA17_Chr4g0060561 | 99.655 | 290 | 1 | 0 | 1 | 290 | 1 | 290 | 0.0 | 601 |
| Msa1259160 | MtrunA17_Chr3g0092651 | 76.190 | 273 | 60 | 3 | 1 | 271 | 1 | 270 | 6.88e-154 | 431 |
| Msa1259160 | MtrunA17_Chr5g0401741 | 56.071 | 280 | 105 | 4 | 1 | 266 | 1 | 276 | 3.46e-104 | 306 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1259160 | AT5G62500.1 | 68.914 | 267 | 77 | 2 | 1 | 264 | 1 | 264 | 3.03e-135 | 384 |
| Msa1259160 | AT3G47690.1 | 69.888 | 269 | 68 | 4 | 1 | 266 | 1 | 259 | 2.04e-134 | 382 |
| Msa1259160 | AT5G67270.1 | 52.574 | 272 | 108 | 3 | 1 | 255 | 1 | 268 | 6.60e-100 | 296 |
Find 78 sgRNAs with CRISPR-Local
Find 272 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACAAAACAGTTAATATATTT+TGG | 0.140591 | 8_2:-60718824 | None:intergenic |
| CCTGCAGAAGTTTGTAATTC+TGG | 0.195394 | 8_2:-60715262 | None:intergenic |
| CGTTACTGTGATTCTATTAA+TGG | 0.196750 | 8_2:+60716390 | Msa1259160:CDS |
| TCTCTTTCTTTCTGCGAAAA+TGG | 0.203212 | 8_2:+60714819 | Msa1259160:exon |
| GCCAGAATTATTCATAATAT+TGG | 0.260420 | 8_2:-60716743 | None:intergenic |
| GCGAAAATGGCGACGAATAT+AGG | 0.272527 | 8_2:+60714832 | Msa1259160:exon |
| ACCAATATTATGAATAATTC+TGG | 0.280217 | 8_2:+60716742 | Msa1259160:CDS |
| TACCAGCAAGGAGCTAGTTT+TGG | 0.281303 | 8_2:-60718538 | None:intergenic |
| ACAGGGATATCCTCCACTTC+TGG | 0.363729 | 8_2:-60717456 | None:intergenic |
| GAAGTTAGCAGGCTTGTTAA+AGG | 0.368713 | 8_2:+60716327 | Msa1259160:CDS |
| ACCTAACGTATATACCTCTT+TGG | 0.375890 | 8_2:-60717007 | None:intergenic |
| GTATAGTGGCCAAGCCATTC+AGG | 0.388153 | 8_2:+60716932 | Msa1259160:intron |
| TCAATTCTGTCTTGCAAGTC+GGG | 0.388164 | 8_2:+60718596 | Msa1259160:three_prime_UTR |
| TCCCAAAACTAGCTCCTTGC+TGG | 0.392681 | 8_2:+60718536 | Msa1259160:exon |
| CACAGTAACGTTTCAGCCAT+TGG | 0.394635 | 8_2:-60716377 | None:intergenic |
| AACGAAGATTGCTCAAGAAA+TGG | 0.395248 | 8_2:+60718790 | Msa1259160:three_prime_UTR |
| AGCTAACCAGAGGTTCTATT+AGG | 0.400370 | 8_2:-60716784 | None:intergenic |
| ACCTTAACTCTTCGCTCAAC+AGG | 0.406563 | 8_2:-60716676 | None:intergenic |
| TGGTGATCTGCACTCTCCTA+TGG | 0.407219 | 8_2:+60718619 | Msa1259160:three_prime_UTR |
| GATGCGTCACATCCATCATT+TGG | 0.413789 | 8_2:-60715091 | None:intergenic |
| TGCTGATTCCTTTGCATCAG+TGG | 0.422807 | 8_2:-60718402 | None:intergenic |
| GCTTGTTAAAGGCAGACCTT+TGG | 0.429462 | 8_2:+60716338 | Msa1259160:CDS |
| AGGCAGACCTTTGGACAACT+TGG | 0.430840 | 8_2:+60716347 | Msa1259160:CDS |
| GGCGACGAATATAGGCATAA+TGG | 0.437973 | 8_2:+60714840 | Msa1259160:CDS |
| GTGTTTGTTTCCTTGTAGCC+TGG | 0.438821 | 8_2:+60718678 | Msa1259160:three_prime_UTR |
| TCCTGTTGAGCGAAGAGTTA+AGG | 0.440147 | 8_2:+60716675 | Msa1259160:CDS |
| GCCAAGCCATTCAGGTCAAG+TGG | 0.449870 | 8_2:+60716940 | Msa1259160:CDS |
| GGCAGCATATTGAAGTTAGC+AGG | 0.450143 | 8_2:+60716316 | Msa1259160:intron |
| CCCACTTGACCTGAATGGCT+TGG | 0.452772 | 8_2:-60716941 | None:intergenic |
| GATATTGGTTAGGCTGCATC+TGG | 0.461979 | 8_2:+60715056 | Msa1259160:intron |
| GAAATCGAATGTGTGAAGTA+TGG | 0.463586 | 8_2:-60714739 | None:intergenic |
| GCAGGAACGAGATTCTGAAT+TGG | 0.472018 | 8_2:+60714881 | Msa1259160:CDS |
| ATGGATAGTGCATACTTTGT+CGG | 0.478923 | 8_2:+60714859 | Msa1259160:CDS |
| ATTATGAATAATTCTGGCTC+AGG | 0.480706 | 8_2:+60716748 | Msa1259160:CDS |
| CTGGGTCCTAATAGAACCTC+TGG | 0.483064 | 8_2:+60716778 | Msa1259160:CDS |
| GGTGATCTGCACTCTCCTAT+GGG | 0.489581 | 8_2:+60718620 | Msa1259160:three_prime_UTR |
| TTGTTTCCTTGTAGCCTGGA+TGG | 0.493950 | 8_2:+60718682 | Msa1259160:three_prime_UTR |
| TTCAATTCTGTCTTGCAAGT+CGG | 0.500090 | 8_2:+60718595 | Msa1259160:three_prime_UTR |
| TTGAAGAGAACAAGAAGAAG+AGG | 0.501035 | 8_2:-60714787 | None:intergenic |
| CCAAGCCATTCAGGTCAAGT+GGG | 0.506200 | 8_2:+60716941 | Msa1259160:CDS |
| GATTCAGACTTTGTCCAAAG+AGG | 0.513628 | 8_2:+60716993 | Msa1259160:CDS |
| ACAGCATTCATAGTTTGACT+TGG | 0.516250 | 8_2:-60718485 | None:intergenic |
| CCAGAATTACAAACTTCTGC+AGG | 0.520419 | 8_2:+60715262 | Msa1259160:CDS |
| GCCATTCAGGTCAAGTGGGG+GGG | 0.520542 | 8_2:+60716945 | Msa1259160:CDS |
| GTAACAGCCACCTTGTGCAT+TGG | 0.529289 | 8_2:-60715125 | None:intergenic |
| GATTATCCATCCAGGCTACA+AGG | 0.539788 | 8_2:-60718688 | None:intergenic |
| AAAGAGGCTAGCAAATGTCT+TGG | 0.540733 | 8_2:-60718563 | None:intergenic |
| CAAGCCATTCAGGTCAAGTG+GGG | 0.556541 | 8_2:+60716942 | Msa1259160:CDS |
| ATGATGGATGTGACGCATCA+AGG | 0.557465 | 8_2:+60715095 | Msa1259160:CDS |
| TATCATGTGATTATCCATCC+AGG | 0.557504 | 8_2:-60718696 | None:intergenic |
| TTTGTATGCCACTGATGCAA+AGG | 0.562050 | 8_2:+60718394 | Msa1259160:CDS |
| TGATGCAAAGGAATCAGCAC+TGG | 0.562436 | 8_2:+60718406 | Msa1259160:CDS |
| AAGCCATTCAGGTCAAGTGG+GGG | 0.563374 | 8_2:+60716943 | Msa1259160:CDS |
| TGCTGTACAATGCCAAATGA+TGG | 0.564839 | 8_2:+60715079 | Msa1259160:CDS |
| CAGCATTCATAGTTTGACTT+GGG | 0.565837 | 8_2:-60718484 | None:intergenic |
| AAAAGTCTCTCTCTTTCTCA+AGG | 0.572348 | 8_2:-60717392 | None:intergenic |
| TTCTGGCTCAGGCAACACAC+TGG | 0.577044 | 8_2:+60716759 | Msa1259160:CDS |
| AGCCATTCAGGTCAAGTGGG+GGG | 0.577781 | 8_2:+60716944 | Msa1259160:CDS |
| ATAATCACATGATAAATGAC+TGG | 0.584555 | 8_2:+60718705 | Msa1259160:three_prime_UTR |
| ACATGGTGTTCTATGCCCAT+AGG | 0.592734 | 8_2:-60718635 | None:intergenic |
| ATGTGTGAAGTATGGTATTG+TGG | 0.593448 | 8_2:-60714731 | None:intergenic |
| ATAGTGCATACTTTGTCGGC+AGG | 0.594763 | 8_2:+60714863 | Msa1259160:CDS |
| ACAACTTGGAGTTCCTCCAA+TGG | 0.595027 | 8_2:+60716361 | Msa1259160:CDS |
| TACTGTGATTCTATTAATGG+CGG | 0.608916 | 8_2:+60716393 | Msa1259160:CDS |
| TCTGGCTCAGGCAACACACT+GGG | 0.611070 | 8_2:+60716760 | Msa1259160:CDS |
| ATTCTGTCTTGCAAGTCGGG+TGG | 0.613029 | 8_2:+60718599 | Msa1259160:three_prime_UTR |
| CATATGTCAGACTCCAGAAG+TGG | 0.613330 | 8_2:+60717443 | Msa1259160:CDS |
| ATGTCAGACTCCAGAAGTGG+AGG | 0.615946 | 8_2:+60717446 | Msa1259160:CDS |
| CAACAAGCTGAAAATTGACA+AGG | 0.632418 | 8_2:+60715292 | Msa1259160:CDS |
| TACTGATCTCAAATTTACAG+TGG | 0.646076 | 8_2:+60717365 | Msa1259160:CDS |
| AGGAACTCCAAGTTGTCCAA+AGG | 0.646182 | 8_2:-60716354 | None:intergenic |
| AGTAACGTTTCAGCCATTGG+AGG | 0.647456 | 8_2:-60716374 | None:intergenic |
| GTGAGAGATTGAGCTGAAGT+AGG | 0.649304 | 8_2:-60714912 | None:intergenic |
| AATGTCTTGGCATACCAGCA+AGG | 0.650422 | 8_2:-60718550 | None:intergenic |
| AGGAGTTGTTCCAATGCACA+AGG | 0.665845 | 8_2:+60715115 | Msa1259160:CDS |
| GTTGAGCGAAGAGTTAAGGT+CGG | 0.693286 | 8_2:+60716679 | Msa1259160:CDS |
| AGTCTCTCTCTTTCTCAAGG+CGG | 0.725031 | 8_2:-60717389 | None:intergenic |
| TGTGAAGTATGGTATTGTGG+TGG | 0.728673 | 8_2:-60714728 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATTTCTTCTTTATTATAATT+AGG | + | chr8_2:60715699-60715718 | Msa1259160:intron | 10.0% |
| !! | TAAAATTATATACAAATAAC+TGG | - | chr8_2:60717117-60717136 | None:intergenic | 10.0% |
| !!! | TTTGTATATAATTTTATATC+AGG | + | chr8_2:60717121-60717140 | Msa1259160:intron | 10.0% |
| !!! | TGAACTATAATTATTTTTTT+TGG | + | chr8_2:60717826-60717845 | Msa1259160:intron | 10.0% |
| !!! | TTTTTTATAATTTTGCATTG+TGG | + | chr8_2:60715192-60715211 | Msa1259160:intron | 15.0% |
| !!! | TTTTTATAATTTTGCATTGT+GGG | + | chr8_2:60715193-60715212 | Msa1259160:intron | 15.0% |
| !!! | AATCTACATTTCTTTATTTT+AGG | + | chr8_2:60715422-60715441 | Msa1259160:intron | 15.0% |
| !!! | TATTTTAAAAGATATGTGAA+TGG | - | chr8_2:60716545-60716564 | None:intergenic | 15.0% |
| !!! | GATAAAAGAAAATTTGTTAT+TGG | - | chr8_2:60717662-60717681 | None:intergenic | 15.0% |
| !!! | TAGACTGAATTATAAATTTT+AGG | + | chr8_2:60717849-60717868 | Msa1259160:intron | 15.0% |
| !!! | AGACTGAATTATAAATTTTA+GGG | + | chr8_2:60717850-60717869 | Msa1259160:intron | 15.0% |
| !!! | ACAAAACAGTTAATATATTT+TGG | - | chr8_2:60718827-60718846 | None:intergenic | 15.0% |
| !!! | TTATGCTTGATTTTTCTTTT+GGG | + | chr8_2:60715152-60715171 | Msa1259160:intron | 20.0% |
| !! | AAATAAGAAAGAAAGAATGT+TGG | + | chr8_2:60715361-60715380 | Msa1259160:intron | 20.0% |
| !! | AATAAGAAAGAAAGAATGTT+GGG | + | chr8_2:60715362-60715381 | Msa1259160:intron | 20.0% |
| !!! | ATTTTTATTCTTTAGCATAG+CGG | + | chr8_2:60715398-60715417 | Msa1259160:intron | 20.0% |
| !!! | TTCTTTATTTTAGGTTTCAA+TGG | + | chr8_2:60715431-60715450 | Msa1259160:intron | 20.0% |
| !! | TATGCATCAATAGAATTTAT+AGG | - | chr8_2:60715924-60715943 | None:intergenic | 20.0% |
| !!! | GGAATTTTTTATGTGTAATA+TGG | + | chr8_2:60716117-60716136 | Msa1259160:intron | 20.0% |
| !! | ACCAATATTATGAATAATTC+TGG | + | chr8_2:60716742-60716761 | Msa1259160:CDS | 20.0% |
| !! | CAAAAATTGTTATAAGCATA+TGG | - | chr8_2:60717034-60717053 | None:intergenic | 20.0% |
| !!! | CATATGCTTATAACAATTTT+TGG | + | chr8_2:60717032-60717051 | Msa1259160:intron | 20.0% |
| !!! | AAAAATTGCTTGTTCTTTTA+TGG | + | chr8_2:60717236-60717255 | Msa1259160:intron | 20.0% |
| !!! | AAAATTGCTTGTTCTTTTAT+GGG | + | chr8_2:60717237-60717256 | Msa1259160:intron | 20.0% |
| !! | TGAATTTCGTAATTTCTTTA+TGG | + | chr8_2:60717682-60717701 | Msa1259160:intron | 20.0% |
| !!! | ATAATTATAGTTCAAGTTTC+AGG | - | chr8_2:60717820-60717839 | None:intergenic | 20.0% |
| !! | AATAAATTCATTCTTAAACC+TGG | + | chr8_2:60718215-60718234 | Msa1259160:intron | 20.0% |
| !! | ATAAATTCATTCTTAAACCT+GGG | + | chr8_2:60718216-60718235 | Msa1259160:intron | 20.0% |
| !!! | AATTGAATTTGCTTAAAAAG+AGG | - | chr8_2:60718582-60718601 | None:intergenic | 20.0% |
| !!! | ATATGACAATTTTCATTACA+TGG | - | chr8_2:60718655-60718674 | None:intergenic | 20.0% |
| ! | AAAACATGCAAAAAGGATTA+GGG | - | chr8_2:60714965-60714984 | None:intergenic | 25.0% |
| ! | AAAAACATGCAAAAAGGATT+AGG | - | chr8_2:60714966-60714985 | None:intergenic | 25.0% |
| ! | ATTAGCAAAAACATGCAAAA+AGG | - | chr8_2:60714972-60714991 | None:intergenic | 25.0% |
| !! | GTTGATCTTGTTTATGATAT+TGG | + | chr8_2:60715041-60715060 | Msa1259160:intron | 25.0% |
| !! | TCTTGTTTATGATATTGGTT+AGG | + | chr8_2:60715046-60715065 | Msa1259160:intron | 25.0% |
| !! | GTTATGCTTGATTTTTCTTT+TGG | + | chr8_2:60715151-60715170 | Msa1259160:intron | 25.0% |
| !! | TATGCTTGATTTTTCTTTTG+GGG | + | chr8_2:60715153-60715172 | Msa1259160:intron | 25.0% |
| ! | TAGCTTATGACATATTCATA+AGG | - | chr8_2:60715577-60715596 | None:intergenic | 25.0% |
| ! | TCTATTGATGCATAATTTGA+CGG | + | chr8_2:60715930-60715949 | Msa1259160:intron | 25.0% |
| ! | GTGATGCATGATAAATATTA+GGG | - | chr8_2:60716025-60716044 | None:intergenic | 25.0% |
| ! | TACAATAGGAATTTAGAGAA+GGG | + | chr8_2:60716096-60716115 | Msa1259160:intron | 25.0% |
| !!! | ATGTGAGCTTTTTTTCTTAA+CGG | + | chr8_2:60716189-60716208 | Msa1259160:intron | 25.0% |
| ! | GATAACTTGAGATTAAAAAC+TGG | + | chr8_2:60716225-60716244 | Msa1259160:intron | 25.0% |
| ! | TGTTTATATATAGTGTCTCT+TGG | + | chr8_2:60716274-60716293 | Msa1259160:intron | 25.0% |
| ! | TATGTAGACACGTTAATAAT+TGG | - | chr8_2:60716475-60716494 | None:intergenic | 25.0% |
| !!! | CAGTGATTTTGATTTTTTCA+GGG | - | chr8_2:60716719-60716738 | None:intergenic | 25.0% |
| ! | GCCAGAATTATTCATAATAT+TGG | - | chr8_2:60716746-60716765 | None:intergenic | 25.0% |
| ! | ATTCATGTTGTAAAACCATT+AGG | - | chr8_2:60716853-60716872 | None:intergenic | 25.0% |
| ! | TAAAGAAAAGAGATGAGAAA+AGG | - | chr8_2:60716881-60716900 | None:intergenic | 25.0% |
| !!! | TCTTTATTTCCTTCTCTTTT+TGG | + | chr8_2:60716895-60716914 | Msa1259160:intron | 25.0% |
| !!! | TTGTTTTCTTTTGAGTATAG+TGG | + | chr8_2:60716918-60716937 | Msa1259160:intron | 25.0% |
| !! | AAAAGAACAAGCAATTTTTC+AGG | - | chr8_2:60717235-60717254 | None:intergenic | 25.0% |
| ! | AATTTCCCGATAAAAATATC+AGG | - | chr8_2:60717285-60717304 | None:intergenic | 25.0% |
| ! | CCTTTATTAGATTTCTTACA+GGG | - | chr8_2:60717476-60717495 | None:intergenic | 25.0% |
| ! | TAATTTCTTTATGGTTGACT+GGG | + | chr8_2:60717691-60717710 | Msa1259160:intron | 25.0% |
| !!! | TAGCATTTGTTTTGATTAGT+TGG | + | chr8_2:60717888-60717907 | Msa1259160:intron | 25.0% |
| ! | ACAAGTGATAATAATGTCAT+TGG | + | chr8_2:60718024-60718043 | Msa1259160:intron | 25.0% |
| ! | TATATAGTTGCAATTGGAAA+AGG | + | chr8_2:60718050-60718069 | Msa1259160:intron | 25.0% |
| ! | ATAATCACATGATAAATGAC+TGG | + | chr8_2:60718705-60718724 | Msa1259160:three_prime_UTR | 25.0% |
| !!! | ACAGTTAATATATTTTGGCT+AGG | - | chr8_2:60718822-60718841 | None:intergenic | 25.0% |
| !!! | TGCATTGTGGGTTTTATTAT+AGG | + | chr8_2:60715205-60715224 | Msa1259160:intron | 30.0% |
| AATGGAATGATTGAACACTT+GGG | + | chr8_2:60715449-60715468 | Msa1259160:intron | 30.0% | |
| !! | GCTGTTTTCATAAACTATCA+TGG | + | chr8_2:60715524-60715543 | Msa1259160:intron | 30.0% |
| TATTAAACGCTTGTTTCGAT+TGG | - | chr8_2:60715662-60715681 | None:intergenic | 30.0% | |
| AGCGTTTAATATCACATCAA+AGG | + | chr8_2:60715671-60715690 | Msa1259160:intron | 30.0% | |
| TGAATCTCATCTCATTAGTT+AGG | + | chr8_2:60715766-60715785 | Msa1259160:intron | 30.0% | |
| GGTGATGCATGATAAATATT+AGG | - | chr8_2:60716026-60716045 | None:intergenic | 30.0% | |
| TATTGGGGAATTATCTCTTT+AGG | + | chr8_2:60716058-60716077 | Msa1259160:intron | 30.0% | |
| AATTATCTCTTTAGGCAAGT+TGG | + | chr8_2:60716066-60716085 | Msa1259160:intron | 30.0% | |
| CTACAATAGGAATTTAGAGA+AGG | + | chr8_2:60716095-60716114 | Msa1259160:intron | 30.0% | |
| !! | ATGCTCAATCTCATTTTGAT+TGG | + | chr8_2:60716145-60716164 | Msa1259160:intron | 30.0% |
| !!! | TCAATCTCATTTTGATTGGT+AGG | + | chr8_2:60716149-60716168 | Msa1259160:intron | 30.0% |
| CGTTACTGTGATTCTATTAA+TGG | + | chr8_2:60716390-60716409 | Msa1259160:CDS | 30.0% | |
| TACTGTGATTCTATTAATGG+CGG | + | chr8_2:60716393-60716412 | Msa1259160:CDS | 30.0% | |
| !!! | TTGATTTTTTCAGGGAACTT+CGG | - | chr8_2:60716711-60716730 | None:intergenic | 30.0% |
| !!! | GCAGTGATTTTGATTTTTTC+AGG | - | chr8_2:60716720-60716739 | None:intergenic | 30.0% |
| !! | ATTATGAATAATTCTGGCTC+AGG | + | chr8_2:60716748-60716767 | Msa1259160:CDS | 30.0% |
| ! | ATGTTCAACATTTTGCCTAA+TGG | + | chr8_2:60716835-60716854 | Msa1259160:intron | 30.0% |
| AAAAGAGATGAGAAAAGGAA+AGG | - | chr8_2:60716876-60716895 | None:intergenic | 30.0% | |
| AGAAAACAACCAAAAAGAGA+AGG | - | chr8_2:60716907-60716926 | None:intergenic | 30.0% | |
| !! | GTACCACCTGATATTTTTAT+CGG | + | chr8_2:60717276-60717295 | Msa1259160:intron | 30.0% |
| !! | TACCACCTGATATTTTTATC+GGG | + | chr8_2:60717277-60717296 | Msa1259160:intron | 30.0% |
| AAGAGTAAAGAAGGGAATAA+CGG | - | chr8_2:60717325-60717344 | None:intergenic | 30.0% | |
| TACTGATCTCAAATTTACAG+TGG | + | chr8_2:60717365-60717384 | Msa1259160:CDS | 30.0% | |
| ! | ACTTTTACTTCGCAAAACTA+CGG | + | chr8_2:60717409-60717428 | Msa1259160:CDS | 30.0% |
| CCCTGTAAGAAATCTAATAA+AGG | + | chr8_2:60717473-60717492 | Msa1259160:intron | 30.0% | |
| GCCTTTATTAGATTTCTTAC+AGG | - | chr8_2:60717477-60717496 | None:intergenic | 30.0% | |
| GTAATTTCTTTATGGTTGAC+TGG | + | chr8_2:60717690-60717709 | Msa1259160:intron | 30.0% | |
| AATTTCTTTATGGTTGACTG+GGG | + | chr8_2:60717692-60717711 | Msa1259160:intron | 30.0% | |
| !! | AACTTTTTGAGCAAAAACTC+TGG | - | chr8_2:60717741-60717760 | None:intergenic | 30.0% |
| ! | GTTTTTGCTCAAAAAGTTGA+TGG | + | chr8_2:60717743-60717762 | Msa1259160:intron | 30.0% |
| !!! | CATTTGTTTTGATTAGTTGG+AGG | + | chr8_2:60717891-60717910 | Msa1259160:intron | 30.0% |
| AGCAGAATAATTGAACATAG+AGG | + | chr8_2:60717916-60717935 | Msa1259160:intron | 30.0% | |
| TAGATCTAGATAATGTGTAC+TGG | - | chr8_2:60717973-60717992 | None:intergenic | 30.0% | |
| TGGATCTATATAGTTGCAAT+TGG | + | chr8_2:60718044-60718063 | Msa1259160:intron | 30.0% | |
| !!! | TTGGTGACTTTTGTTTTCTT+TGG | + | chr8_2:60718075-60718094 | Msa1259160:intron | 30.0% |
| ATGTGTGAAGTATGGTATTG+TGG | - | chr8_2:60714734-60714753 | None:intergenic | 35.0% | |
| GAAATCGAATGTGTGAAGTA+TGG | - | chr8_2:60714742-60714761 | None:intergenic | 35.0% | |
| TTGAAGAGAACAAGAAGAAG+AGG | - | chr8_2:60714790-60714809 | None:intergenic | 35.0% | |
| TCTCTTTCTTTCTGCGAAAA+TGG | + | chr8_2:60714819-60714838 | Msa1259160:exon | 35.0% | |
| ATGGATAGTGCATACTTTGT+CGG | + | chr8_2:60714859-60714878 | Msa1259160:CDS | 35.0% | |
| TGCAAAAAGGATTAGGGTTA+GGG | - | chr8_2:60714959-60714978 | None:intergenic | 35.0% | |
| ATGCAAAAAGGATTAGGGTT+AGG | - | chr8_2:60714960-60714979 | None:intergenic | 35.0% | |
| CAACAAGCTGAAAATTGACA+AGG | + | chr8_2:60715292-60715311 | Msa1259160:CDS | 35.0% | |
| CAATGGAATGATTGAACACT+TGG | + | chr8_2:60715448-60715467 | Msa1259160:intron | 35.0% | |
| GAAGCATAGTGGTATGTTAT+AGG | - | chr8_2:60715806-60715825 | None:intergenic | 35.0% | |
| ! | TGAAAAAAGAGGAAGCATAG+TGG | - | chr8_2:60715817-60715836 | None:intergenic | 35.0% |
| !!! | TGCTTCCTCTTTTTTCAACT+CGG | + | chr8_2:60715820-60715839 | Msa1259160:intron | 35.0% |
| TCACCAGCATACTCTAATAT+TGG | + | chr8_2:60716041-60716060 | Msa1259160:intron | 35.0% | |
| CACCAGCATACTCTAATATT+GGG | + | chr8_2:60716042-60716061 | Msa1259160:intron | 35.0% | |
| ACCAGCATACTCTAATATTG+GGG | + | chr8_2:60716043-60716062 | Msa1259160:intron | 35.0% | |
| CACTGAGAAATATGAATGCA+TGG | - | chr8_2:60716588-60716607 | None:intergenic | 35.0% | |
| AGGCAAAATGTTGAACATCT+TGG | - | chr8_2:60716833-60716852 | None:intergenic | 35.0% | |
| ! | TCCAAAGAGGTATATACGTT+AGG | + | chr8_2:60717006-60717025 | Msa1259160:intron | 35.0% |
| ACCTAACGTATATACCTCTT+TGG | - | chr8_2:60717010-60717029 | None:intergenic | 35.0% | |
| TAACACTTCATGGACTTCTT+AGG | - | chr8_2:60717072-60717091 | None:intergenic | 35.0% | |
| TGACATATTGTATACCACAG+GGG | - | chr8_2:60717191-60717210 | None:intergenic | 35.0% | |
| CTGACATATTGTATACCACA+GGG | - | chr8_2:60717192-60717211 | None:intergenic | 35.0% | |
| ACTGACATATTGTATACCAC+AGG | - | chr8_2:60717193-60717212 | None:intergenic | 35.0% | |
| TTCCCGATAAAAATATCAGG+TGG | - | chr8_2:60717282-60717301 | None:intergenic | 35.0% | |
| AGATCAGTAATCTGTGAAAC+AGG | - | chr8_2:60717354-60717373 | None:intergenic | 35.0% | |
| AAAAGTCTCTCTCTTTCTCA+AGG | - | chr8_2:60717395-60717414 | None:intergenic | 35.0% | |
| ! | CTTTTACTTCGCAAAACTAC+GGG | + | chr8_2:60717410-60717429 | Msa1259160:CDS | 35.0% |
| GAATCAGAGATTACATCACA+CGG | - | chr8_2:60717564-60717583 | None:intergenic | 35.0% | |
| !! | TTTTTGAGCAAAAACTCTGG+CGG | - | chr8_2:60717738-60717757 | None:intergenic | 35.0% |
| TTGACATGGATCTTGTTAAG+TGG | + | chr8_2:60717774-60717793 | Msa1259160:intron | 35.0% | |
| ATGGATCTTGTTAAGTGGAT+GGG | + | chr8_2:60717779-60717798 | Msa1259160:intron | 35.0% | |
| ! | CTGTTTCTTTAACCATCACA+AGG | + | chr8_2:60718113-60718132 | Msa1259160:intron | 35.0% |
| ATTCATTCTTAAACCTGGGT+TGG | + | chr8_2:60718220-60718239 | Msa1259160:intron | 35.0% | |
| ! | AGCTTGACTTTTACACTGAT+GGG | - | chr8_2:60718290-60718309 | None:intergenic | 35.0% |
| TTGTTACATGTTCTCTATGC+AGG | + | chr8_2:60718349-60718368 | Msa1259160:intron | 35.0% | |
| ! | CAGCATTCATAGTTTGACTT+GGG | - | chr8_2:60718487-60718506 | None:intergenic | 35.0% |
| ACAGCATTCATAGTTTGACT+TGG | - | chr8_2:60718488-60718507 | None:intergenic | 35.0% | |
| TTCAATTCTGTCTTGCAAGT+CGG | + | chr8_2:60718595-60718614 | Msa1259160:three_prime_UTR | 35.0% | |
| TATCATGTGATTATCCATCC+AGG | - | chr8_2:60718699-60718718 | None:intergenic | 35.0% | |
| AACGAAGATTGCTCAAGAAA+TGG | + | chr8_2:60718790-60718809 | Msa1259160:three_prime_UTR | 35.0% | |
| TGTGAAGTATGGTATTGTGG+TGG | - | chr8_2:60714731-60714750 | None:intergenic | 40.0% | |
| GCAAAAAGGATTAGGGTTAG+GGG | - | chr8_2:60714958-60714977 | None:intergenic | 40.0% | |
| TGCTGTACAATGCCAAATGA+TGG | + | chr8_2:60715079-60715098 | Msa1259160:CDS | 40.0% | |
| CCTGCAGAAGTTTGTAATTC+TGG | - | chr8_2:60715265-60715284 | None:intergenic | 40.0% | |
| CCAGAATTACAAACTTCTGC+AGG | + | chr8_2:60715262-60715281 | Msa1259160:CDS | 40.0% | |
| AACACTTGGGTCATGTAACA+CGG | + | chr8_2:60715462-60715481 | Msa1259160:intron | 40.0% | |
| AAGCACTTGTGACACTCTTT+GGG | - | chr8_2:60715614-60715633 | None:intergenic | 40.0% | |
| TAAGCACTTGTGACACTCTT+TGG | - | chr8_2:60715615-60715634 | None:intergenic | 40.0% | |
| ! | GCTTATTTGAGTTTATCCCC+TGG | - | chr8_2:60715640-60715659 | None:intergenic | 40.0% |
| ! | GGATACCGAGTTGAAAAAAG+AGG | - | chr8_2:60715828-60715847 | None:intergenic | 40.0% |
| GTATCCGATTGCTCTGATTT+GGG | + | chr8_2:60715842-60715861 | Msa1259160:intron | 40.0% | |
| ! | TATCCGATTGCTCTGATTTG+GGG | + | chr8_2:60715843-60715862 | Msa1259160:intron | 40.0% |
| ATTTGGGGACATGTGAAGTA+TGG | + | chr8_2:60715858-60715877 | Msa1259160:intron | 40.0% | |
| TTTGGGGACATGTGAAGTAT+GGG | + | chr8_2:60715859-60715878 | Msa1259160:intron | 40.0% | |
| GAGAAACACACTATTGACGA+TGG | - | chr8_2:60715897-60715916 | None:intergenic | 40.0% | |
| CGTCAATAGTGTGTTTCTCA+AGG | + | chr8_2:60715898-60715917 | Msa1259160:intron | 40.0% | |
| TCCCCAATATTAGAGTATGC+TGG | - | chr8_2:60716047-60716066 | None:intergenic | 40.0% | |
| AAGTTGGCTAAGGCTACAAT+AGG | + | chr8_2:60716082-60716101 | Msa1259160:intron | 40.0% | |
| GGCTTAACGTGACTATCATT+TGG | + | chr8_2:60716295-60716314 | Msa1259160:intron | 40.0% | |
| !! | GAAGTTAGCAGGCTTGTTAA+AGG | + | chr8_2:60716327-60716346 | Msa1259160:CDS | 40.0% |
| AGCTAACCAGAGGTTCTATT+AGG | - | chr8_2:60716787-60716806 | None:intergenic | 40.0% | |
| AAGAACTAGAAGCTAACCAG+AGG | - | chr8_2:60716797-60716816 | None:intergenic | 40.0% | |
| !! | TCTGGTTAGCTTCTAGTTCT+TGG | + | chr8_2:60716796-60716815 | Msa1259160:intron | 40.0% |
| GATTCAGACTTTGTCCAAAG+AGG | + | chr8_2:60716993-60717012 | Msa1259160:CDS | 40.0% | |
| ! | GTCCATGAAGTGTTACCAAA+CGG | + | chr8_2:60717077-60717096 | Msa1259160:intron | 40.0% |
| GAAACAGAATTTGCACCGTT+TGG | - | chr8_2:60717095-60717114 | None:intergenic | 40.0% | |
| !! | ATCAGGTGGTACAGTTTTAG+TGG | - | chr8_2:60717268-60717287 | None:intergenic | 40.0% |
| !! | GGAATAACGGACAAACAATG+AGG | - | chr8_2:60717312-60717331 | None:intergenic | 40.0% |
| GGAGACGAAAGAGTAAAGAA+GGG | - | chr8_2:60717333-60717352 | None:intergenic | 40.0% | |
| AGGAGACGAAAGAGTAAAGA+AGG | - | chr8_2:60717334-60717353 | None:intergenic | 40.0% | |
| CACGGAACAAGAGTCAAATT+AGG | - | chr8_2:60717546-60717565 | None:intergenic | 40.0% | |
| AAGACTTATCCCACTAAGTG+GGG | - | chr8_2:60717616-60717635 | None:intergenic | 40.0% | |
| CAAGACTTATCCCACTAAGT+GGG | - | chr8_2:60717617-60717636 | None:intergenic | 40.0% | |
| !! | TGATGGTTCTGACATTGACA+TGG | + | chr8_2:60717760-60717779 | Msa1259160:intron | 40.0% |
| CATGGATCTTGTTAAGTGGA+TGG | + | chr8_2:60717778-60717797 | Msa1259160:intron | 40.0% | |
| ATCTTGTTAAGTGGATGGGA+TGG | + | chr8_2:60717783-60717802 | Msa1259160:intron | 40.0% | |
| TCTTGTTAAGTGGATGGGAT+GGG | + | chr8_2:60717784-60717803 | Msa1259160:intron | 40.0% | |
| !!! | TTTTAGGGTGAGCGATTTTG+CGG | + | chr8_2:60717865-60717884 | Msa1259160:intron | 40.0% |
| GTTGCAATTGGAAAAGGCTT+TGG | + | chr8_2:60718056-60718075 | Msa1259160:intron | 40.0% | |
| CAGAGTTACAATCCTTGTGA+TGG | - | chr8_2:60718128-60718147 | None:intergenic | 40.0% | |
| CATCACAAGGATTGTAACTC+TGG | + | chr8_2:60718126-60718145 | Msa1259160:intron | 40.0% | |
| !!! | CCACGTTCTGAAGGTATTTT+GGG | - | chr8_2:60718249-60718268 | None:intergenic | 40.0% |
| !!! | ACCACGTTCTGAAGGTATTT+TGG | - | chr8_2:60718250-60718269 | None:intergenic | 40.0% |
| ! | CAGCTTGACTTTTACACTGA+TGG | - | chr8_2:60718291-60718310 | None:intergenic | 40.0% |
| TTTGTATGCCACTGATGCAA+AGG | + | chr8_2:60718394-60718413 | Msa1259160:CDS | 40.0% | |
| AAAGAGGCTAGCAAATGTCT+TGG | - | chr8_2:60718566-60718585 | None:intergenic | 40.0% | |
| TCAATTCTGTCTTGCAAGTC+GGG | + | chr8_2:60718596-60718615 | Msa1259160:three_prime_UTR | 40.0% | |
| GCGAAAATGGCGACGAATAT+AGG | + | chr8_2:60714832-60714851 | Msa1259160:exon | 45.0% | |
| GGCGACGAATATAGGCATAA+TGG | + | chr8_2:60714840-60714859 | Msa1259160:CDS | 45.0% | |
| ATAGTGCATACTTTGTCGGC+AGG | + | chr8_2:60714863-60714882 | Msa1259160:CDS | 45.0% | |
| GCAGGAACGAGATTCTGAAT+TGG | + | chr8_2:60714881-60714900 | Msa1259160:CDS | 45.0% | |
| GTGAGAGATTGAGCTGAAGT+AGG | - | chr8_2:60714915-60714934 | None:intergenic | 45.0% | |
| AAGGATTAGGGTTAGGGGTT+TGG | - | chr8_2:60714953-60714972 | None:intergenic | 45.0% | |
| ! | GATATTGGTTAGGCTGCATC+TGG | + | chr8_2:60715056-60715075 | Msa1259160:intron | 45.0% |
| GATGCGTCACATCCATCATT+TGG | - | chr8_2:60715094-60715113 | None:intergenic | 45.0% | |
| !! | ATGATGGATGTGACGCATCA+AGG | + | chr8_2:60715095-60715114 | Msa1259160:CDS | 45.0% |
| AGGAGTTGTTCCAATGCACA+AGG | + | chr8_2:60715115-60715134 | Msa1259160:CDS | 45.0% | |
| AGTTGTTCCAATGCACAAGG+TGG | + | chr8_2:60715118-60715137 | Msa1259160:intron | 45.0% | |
| ACACTTGGGTCATGTAACAC+GGG | + | chr8_2:60715463-60715482 | Msa1259160:intron | 45.0% | |
| TGTCACAAGTGCTTATGCCA+GGG | + | chr8_2:60715620-60715639 | Msa1259160:intron | 45.0% | |
| GGTATCCGATTGCTCTGATT+TGG | + | chr8_2:60715841-60715860 | Msa1259160:intron | 45.0% | |
| TGTCCCCAAATCAGAGCAAT+CGG | - | chr8_2:60715849-60715868 | None:intergenic | 45.0% | |
| CACTATTGACGATGGAAGCA+TGG | - | chr8_2:60715889-60715908 | None:intergenic | 45.0% | |
| ATGAACGAGGTTGTGGAACA+AGG | - | chr8_2:60715998-60716017 | None:intergenic | 45.0% | |
| ATATTAGGGCTGCATGAACG+AGG | - | chr8_2:60716011-60716030 | None:intergenic | 45.0% | |
| ! | CTCTTTAGGCAAGTTGGCTA+AGG | + | chr8_2:60716072-60716091 | Msa1259160:intron | 45.0% |
| GGCAGCATATTGAAGTTAGC+AGG | + | chr8_2:60716316-60716335 | Msa1259160:intron | 45.0% | |
| ! | GCTTGTTAAAGGCAGACCTT+TGG | + | chr8_2:60716338-60716357 | Msa1259160:CDS | 45.0% |
| AGGAACTCCAAGTTGTCCAA+AGG | - | chr8_2:60716357-60716376 | None:intergenic | 45.0% | |
| ACAACTTGGAGTTCCTCCAA+TGG | + | chr8_2:60716361-60716380 | Msa1259160:CDS | 45.0% | |
| AGTAACGTTTCAGCCATTGG+AGG | - | chr8_2:60716377-60716396 | None:intergenic | 45.0% | |
| CACAGTAACGTTTCAGCCAT+TGG | - | chr8_2:60716380-60716399 | None:intergenic | 45.0% | |
| TCCTGTTGAGCGAAGAGTTA+AGG | + | chr8_2:60716675-60716694 | Msa1259160:CDS | 45.0% | |
| ACCTTAACTCTTCGCTCAAC+AGG | - | chr8_2:60716679-60716698 | None:intergenic | 45.0% | |
| GTTGAGCGAAGAGTTAAGGT+CGG | + | chr8_2:60716679-60716698 | Msa1259160:CDS | 45.0% | |
| !! | GGTTAGCTTCTAGTTCTTGG+TGG | + | chr8_2:60716799-60716818 | Msa1259160:intron | 45.0% |
| ! | CACCGTTTGGTAACACTTCA+TGG | - | chr8_2:60717082-60717101 | None:intergenic | 45.0% |
| AGTCTCTCTCTTTCTCAAGG+CGG | - | chr8_2:60717392-60717411 | None:intergenic | 45.0% | |
| CATATGTCAGACTCCAGAAG+TGG | + | chr8_2:60717443-60717462 | Msa1259160:CDS | 45.0% | |
| CCAAGACTTATCCCACTAAG+TGG | - | chr8_2:60717618-60717637 | None:intergenic | 45.0% | |
| CCACTTAGTGGGATAAGTCT+TGG | + | chr8_2:60717615-60717634 | Msa1259160:intron | 45.0% | |
| TCTTTATGGTTGACTGGGGA+TGG | + | chr8_2:60717696-60717715 | Msa1259160:intron | 45.0% | |
| CTTTATGGTTGACTGGGGAT+GGG | + | chr8_2:60717697-60717716 | Msa1259160:intron | 45.0% | |
| CTTGTTAAGTGGATGGGATG+GGG | + | chr8_2:60717785-60717804 | Msa1259160:intron | 45.0% | |
| !!! | GTATTTTGGGTTACCAACCC+AGG | - | chr8_2:60718236-60718255 | None:intergenic | 45.0% |
| CCCAAAATACCTTCAGAACG+TGG | + | chr8_2:60718246-60718265 | Msa1259160:intron | 45.0% | |
| TATGACTGACCACGTTCTGA+AGG | - | chr8_2:60718258-60718277 | None:intergenic | 45.0% | |
| !! | TGCTGATTCCTTTGCATCAG+TGG | - | chr8_2:60718405-60718424 | None:intergenic | 45.0% |
| TGATGCAAAGGAATCAGCAC+TGG | + | chr8_2:60718406-60718425 | Msa1259160:CDS | 45.0% | |
| !!! | ACCAGCAAGGAGCTAGTTTT+GGG | - | chr8_2:60718540-60718559 | None:intergenic | 45.0% |
| !! | TACCAGCAAGGAGCTAGTTT+TGG | - | chr8_2:60718541-60718560 | None:intergenic | 45.0% |
| AATGTCTTGGCATACCAGCA+AGG | - | chr8_2:60718553-60718572 | None:intergenic | 45.0% | |
| ACATGGTGTTCTATGCCCAT+AGG | - | chr8_2:60718638-60718657 | None:intergenic | 45.0% | |
| GTGTTTGTTTCCTTGTAGCC+TGG | + | chr8_2:60718678-60718697 | Msa1259160:three_prime_UTR | 45.0% | |
| TTGTTTCCTTGTAGCCTGGA+TGG | + | chr8_2:60718682-60718701 | Msa1259160:three_prime_UTR | 45.0% | |
| GATTATCCATCCAGGCTACA+AGG | - | chr8_2:60718691-60718710 | None:intergenic | 45.0% | |
| !!! | TATTTTTATTTTTATTTTGT+AGG | + | chr8_2:60716644-60716663 | Msa1259160:intron | 5.0% |
| GTAACAGCCACCTTGTGCAT+TGG | - | chr8_2:60715128-60715147 | None:intergenic | 50.0% | |
| GTGTCACAAGTGCTTATGCC+AGG | + | chr8_2:60715619-60715638 | Msa1259160:intron | 50.0% | |
| GTCACAAGTGCTTATGCCAG+GGG | + | chr8_2:60715621-60715640 | Msa1259160:intron | 50.0% | |
| ! | ATTGACGATGGAAGCATGGC+TGG | - | chr8_2:60715885-60715904 | None:intergenic | 50.0% |
| AGGCAGACCTTTGGACAACT+TGG | + | chr8_2:60716347-60716366 | Msa1259160:CDS | 50.0% | |
| CTGGGTCCTAATAGAACCTC+TGG | + | chr8_2:60716778-60716797 | Msa1259160:CDS | 50.0% | |
| GTATAGTGGCCAAGCCATTC+AGG | + | chr8_2:60716932-60716951 | Msa1259160:intron | 50.0% | |
| CCAAGCCATTCAGGTCAAGT+GGG | + | chr8_2:60716941-60716960 | Msa1259160:CDS | 50.0% | |
| CAAGCCATTCAGGTCAAGTG+GGG | + | chr8_2:60716942-60716961 | Msa1259160:CDS | 50.0% | |
| AAGCCATTCAGGTCAAGTGG+GGG | + | chr8_2:60716943-60716962 | Msa1259160:CDS | 50.0% | |
| !! | TATACCACAGGGGAGCATCA+GGG | - | chr8_2:60717181-60717200 | None:intergenic | 50.0% |
| ATGTCAGACTCCAGAAGTGG+AGG | + | chr8_2:60717446-60717465 | Msa1259160:CDS | 50.0% | |
| ACAGGGATATCCTCCACTTC+TGG | - | chr8_2:60717459-60717478 | None:intergenic | 50.0% | |
| CTTATCCCACTAAGTGGGGT+CGG | - | chr8_2:60717612-60717631 | None:intergenic | 50.0% | |
| TAAGTGGATGGGATGGGGAA+TGG | + | chr8_2:60717790-60717809 | Msa1259160:intron | 50.0% | |
| TCCCAAAACTAGCTCCTTGC+TGG | + | chr8_2:60718536-60718555 | Msa1259160:exon | 50.0% | |
| ATTCTGTCTTGCAAGTCGGG+TGG | + | chr8_2:60718599-60718618 | Msa1259160:three_prime_UTR | 50.0% | |
| TGGTGATCTGCACTCTCCTA+TGG | + | chr8_2:60718619-60718638 | Msa1259160:three_prime_UTR | 50.0% | |
| GGTGATCTGCACTCTCCTAT+GGG | + | chr8_2:60718620-60718639 | Msa1259160:three_prime_UTR | 50.0% | |
| GCGAAGAGTTAAGGTCGGCA+AGG | + | chr8_2:60716684-60716703 | Msa1259160:CDS | 55.0% | |
| !! | TTCTGGCTCAGGCAACACAC+TGG | + | chr8_2:60716759-60716778 | Msa1259160:CDS | 55.0% |
| ! | TCTGGCTCAGGCAACACACT+GGG | + | chr8_2:60716760-60716779 | Msa1259160:CDS | 55.0% |
| GCCAAGCCATTCAGGTCAAG+TGG | + | chr8_2:60716940-60716959 | Msa1259160:CDS | 55.0% | |
| CCCACTTGACCTGAATGGCT+TGG | - | chr8_2:60716944-60716963 | None:intergenic | 55.0% | |
| AGCCATTCAGGTCAAGTGGG+GGG | + | chr8_2:60716944-60716963 | Msa1259160:CDS | 55.0% | |
| ATTTCCCTGATGCTCCCCTG+TGG | + | chr8_2:60717174-60717193 | Msa1259160:intron | 55.0% | |
| !! | GTATACCACAGGGGAGCATC+AGG | - | chr8_2:60717182-60717201 | None:intergenic | 55.0% |
| ! | TGGGGTCGGCTCAACACTAT+TGG | - | chr8_2:60717598-60717617 | None:intergenic | 55.0% |
| TTGAGCCGACCCCACTTAGT+GGG | + | chr8_2:60717604-60717623 | Msa1259160:intron | 55.0% | |
| ATGGTTGACTGGGGATGGGA+CGG | + | chr8_2:60717701-60717720 | Msa1259160:intron | 55.0% | |
| GGGCTGCATGAACGAGGTTG+TGG | - | chr8_2:60716005-60716024 | None:intergenic | 60.0% | |
| GCCATTCAGGTCAAGTGGGG+GGG | + | chr8_2:60716945-60716964 | Msa1259160:CDS | 60.0% | |
| GTTGAGCCGACCCCACTTAG+TGG | + | chr8_2:60717603-60717622 | Msa1259160:intron | 60.0% | |
| TGGTTGACTGGGGATGGGAC+GGG | + | chr8_2:60717702-60717721 | Msa1259160:intron | 60.0% | |
| GCCCCCCCACTTGACCTGAA+TGG | - | chr8_2:60716949-60716968 | None:intergenic | 65.0% | |
| TTCAGGTCAAGTGGGGGGGC+AGG | + | chr8_2:60716949-60716968 | Msa1259160:CDS | 65.0% | |
| AGGTCAAGTGGGGGGGCAGG+TGG | + | chr8_2:60716952-60716971 | Msa1259160:CDS | 70.0% | |
| GGTCAAGTGGGGGGGCAGGT+GGG | + | chr8_2:60716953-60716972 | Msa1259160:CDS | 70.0% | |
| GTCAAGTGGGGGGGCAGGTG+GGG | + | chr8_2:60716954-60716973 | Msa1259160:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_2 | gene | 60714666 | 60718871 | 60714666 | ID=Msa1259160;Name=Msa1259160 |
| chr8_2 | mRNA | 60714666 | 60718871 | 60714666 | ID=Msa1259160-mRNA-1;Parent=Msa1259160;Name=Msa1259160-mRNA-1;_AED=0.11;_eAED=0.11;_QI=172|1|1|1|1|1|8|324|290 |
| chr8_2 | exon | 60714666 | 60714945 | 60714666 | ID=Msa1259160-mRNA-1:exon:19021;Parent=Msa1259160-mRNA-1 |
| chr8_2 | exon | 60715068 | 60715136 | 60715068 | ID=Msa1259160-mRNA-1:exon:19022;Parent=Msa1259160-mRNA-1 |
| chr8_2 | exon | 60715227 | 60715313 | 60715227 | ID=Msa1259160-mRNA-1:exon:19023;Parent=Msa1259160-mRNA-1 |
| chr8_2 | exon | 60716321 | 60716427 | 60716321 | ID=Msa1259160-mRNA-1:exon:19024;Parent=Msa1259160-mRNA-1 |
| chr8_2 | exon | 60716666 | 60716799 | 60716666 | ID=Msa1259160-mRNA-1:exon:19025;Parent=Msa1259160-mRNA-1 |
| chr8_2 | exon | 60716938 | 60717014 | 60716938 | ID=Msa1259160-mRNA-1:exon:19026;Parent=Msa1259160-mRNA-1 |
| chr8_2 | exon | 60717363 | 60717476 | 60717363 | ID=Msa1259160-mRNA-1:exon:19027;Parent=Msa1259160-mRNA-1 |
| chr8_2 | exon | 60718371 | 60718871 | 60718371 | ID=Msa1259160-mRNA-1:exon:19028;Parent=Msa1259160-mRNA-1 |
| chr8_2 | five_prime_UTR | 60714666 | 60714837 | 60714666 | ID=Msa1259160-mRNA-1:five_prime_utr;Parent=Msa1259160-mRNA-1 |
| chr8_2 | CDS | 60714838 | 60714945 | 60714838 | ID=Msa1259160-mRNA-1:cds;Parent=Msa1259160-mRNA-1 |
| chr8_2 | CDS | 60715068 | 60715136 | 60715068 | ID=Msa1259160-mRNA-1:cds;Parent=Msa1259160-mRNA-1 |
| chr8_2 | CDS | 60715227 | 60715313 | 60715227 | ID=Msa1259160-mRNA-1:cds;Parent=Msa1259160-mRNA-1 |
| chr8_2 | CDS | 60716321 | 60716427 | 60716321 | ID=Msa1259160-mRNA-1:cds;Parent=Msa1259160-mRNA-1 |
| chr8_2 | CDS | 60716666 | 60716799 | 60716666 | ID=Msa1259160-mRNA-1:cds;Parent=Msa1259160-mRNA-1 |
| chr8_2 | CDS | 60716938 | 60717014 | 60716938 | ID=Msa1259160-mRNA-1:cds;Parent=Msa1259160-mRNA-1 |
| chr8_2 | CDS | 60717363 | 60717476 | 60717363 | ID=Msa1259160-mRNA-1:cds;Parent=Msa1259160-mRNA-1 |
| chr8_2 | CDS | 60718371 | 60718547 | 60718371 | ID=Msa1259160-mRNA-1:cds;Parent=Msa1259160-mRNA-1 |
| chr8_2 | three_prime_UTR | 60718548 | 60718871 | 60718548 | ID=Msa1259160-mRNA-1:three_prime_utr;Parent=Msa1259160-mRNA-1 |
| Gene Sequence |
| Protein sequence |
