Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1211780 | XP_003609049.1 | 99.655 | 290 | 1 | 0 | 1 | 290 | 1 | 290 | 0.0 | 602 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1211780 | sp|Q9FJJ5|EB1B_ARATH | 69.663 | 267 | 75 | 2 | 1 | 264 | 1 | 264 | 4.11e-135 | 387 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0077340 | Msa1211780 | 0.833034 | 6.724075e-56 | -8.615850e-47 |
| Msa0093850 | Msa1211780 | 0.816275 | 6.015768e-52 | -8.615850e-47 |
| Msa0626270 | Msa1211780 | 0.815447 | 9.202022e-52 | -8.615850e-47 |
| Msa0626450 | Msa1211780 | 0.806171 | 9.362188e-50 | -8.615850e-47 |
| Msa0626460 | Msa1211780 | 0.810084 | 1.374450e-50 | -8.615850e-47 |
| Msa0626490 | Msa1211780 | 0.804444 | 2.153555e-49 | -8.615850e-47 |
| Msa0638480 | Msa1211780 | 0.800381 | 1.480568e-48 | -8.615850e-47 |
| Msa0664540 | Msa1211780 | 0.807808 | 4.219128e-50 | -8.615850e-47 |
| Msa0664600 | Msa1211780 | 0.805798 | 1.121484e-49 | -8.615850e-47 |
| Msa0693330 | Msa1211780 | 0.817043 | 4.045382e-52 | -8.615850e-47 |
| Msa0695880 | Msa1211780 | 0.804739 | 1.869237e-49 | -8.615850e-47 |
| Msa0702720 | Msa1211780 | 0.806401 | 8.376789e-50 | -8.615850e-47 |
| Msa0125360 | Msa1211780 | 0.805972 | 1.031298e-49 | -8.615850e-47 |
| Msa0138360 | Msa1211780 | 0.807792 | 4.250457e-50 | -8.615850e-47 |
| Msa0225480 | Msa1211780 | 0.811918 | 5.506080e-51 | -8.615850e-47 |
| Msa0225620 | Msa1211780 | 0.809354 | 1.972046e-50 | -8.615850e-47 |
| Msa0417970 | Msa1211780 | 0.825161 | 5.450746e-54 | -8.615850e-47 |
| Msa1072940 | Msa1211780 | 0.804275 | 2.335879e-49 | -8.615850e-47 |
| Msa0249540 | Msa1211780 | 0.817581 | 3.061080e-52 | -8.615850e-47 |
| Msa0279850 | Msa1211780 | 0.809337 | 1.989297e-50 | -8.615850e-47 |
| Msa0307270 | Msa1211780 | 0.822406 | 2.410032e-53 | -8.615850e-47 |
| Msa0315980 | Msa1211780 | 0.820533 | 6.521821e-53 | -8.615850e-47 |
| Msa0322900 | Msa1211780 | 0.818625 | 1.777840e-52 | -8.615850e-47 |
| Msa0339020 | Msa1211780 | 0.805393 | 1.364282e-49 | -8.615850e-47 |
| Msa0341690 | Msa1211780 | 0.823325 | 1.472294e-53 | -8.615850e-47 |
| Msa1127590 | Msa1211780 | 0.804947 | 1.691383e-49 | -8.615850e-47 |
| Msa1210040 | Msa1211780 | 0.840591 | 7.927510e-58 | -8.615850e-47 |
| Msa1211780 | Msa1217210 | 0.804485 | 2.112229e-49 | -8.615850e-47 |
| Msa1211780 | Msa1259160 | 0.836845 | 7.368242e-57 | -8.615850e-47 |
| Msa1211780 | Msa1292020 | 0.829173 | 5.969780e-55 | -8.615850e-47 |
| Msa1211780 | Msa1299650 | 0.838514 | 2.748213e-57 | -8.615850e-47 |
| Msa1211780 | Msa1371520 | 0.812797 | 3.538645e-51 | -8.615850e-47 |
| Msa1211780 | Msa1405460 | 0.822745 | 2.009777e-53 | -8.615850e-47 |
| Msa1211780 | Msa1427110 | 0.832397 | 9.674079e-56 | -8.615850e-47 |
| Msa0519760 | Msa1211780 | 0.831372 | 1.732728e-55 | -8.615850e-47 |
| Msa0519810 | Msa1211780 | 0.828107 | 1.080218e-54 | -8.615850e-47 |
| Msa0519840 | Msa1211780 | 0.833667 | 4.674945e-56 | -8.615850e-47 |
| Msa0527190 | Msa1211780 | 0.818469 | 1.928902e-52 | -8.615850e-47 |
| Msa0529030 | Msa1211780 | 0.821540 | 3.825151e-53 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1211780 | MtrunA17_Chr4g0060561 | 99.655 | 290 | 1 | 0 | 1 | 290 | 1 | 290 | 0.0 | 602 |
| Msa1211780 | MtrunA17_Chr3g0092651 | 76.923 | 273 | 58 | 3 | 1 | 271 | 1 | 270 | 1.01e-154 | 432 |
| Msa1211780 | MtrunA17_Chr5g0401741 | 56.071 | 280 | 105 | 4 | 1 | 266 | 1 | 276 | 2.12e-104 | 307 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1211780 | AT5G62500.1 | 69.663 | 267 | 75 | 2 | 1 | 264 | 1 | 264 | 4.18e-136 | 387 |
| Msa1211780 | AT3G47690.1 | 70.632 | 269 | 66 | 4 | 1 | 266 | 1 | 259 | 2.47e-135 | 384 |
| Msa1211780 | AT5G67270.1 | 52.941 | 272 | 107 | 3 | 1 | 255 | 1 | 268 | 1.25e-100 | 298 |
Find 78 sgRNAs with CRISPR-Local
Find 270 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACAAAACAGTTAATATATTT+TGG | 0.140591 | 8_1:-71519100 | None:intergenic |
| CGTTACTGTGATTCTATTAA+TGG | 0.196750 | 8_1:+71516672 | Msa1211780:CDS |
| TCTCTTTCTTTCTGCGAAAA+TGG | 0.203212 | 8_1:+71515081 | Msa1211780:exon |
| CCTGCAGAACTTTGTAATTC+TGG | 0.217438 | 8_1:-71515524 | None:intergenic |
| GCCAGAATTATTCATAATAT+TGG | 0.260420 | 8_1:-71517023 | None:intergenic |
| GCGAAAATGGCGACGAATAT+AGG | 0.272527 | 8_1:+71515094 | Msa1211780:exon |
| ACCAATATTATGAATAATTC+TGG | 0.280217 | 8_1:+71517022 | Msa1211780:CDS |
| TACCAGCAAGGAGCTAGTTT+TGG | 0.281303 | 8_1:-71518814 | None:intergenic |
| ACAGGGATATCCTCCACTTC+TGG | 0.363729 | 8_1:-71517736 | None:intergenic |
| GAAGTTAGCAGGCTTGTTAA+AGG | 0.368713 | 8_1:+71516609 | Msa1211780:CDS |
| ACCTAACGTATATACCTCTT+TGG | 0.375890 | 8_1:-71517287 | None:intergenic |
| GTATAGTGGCCAAGCCATTC+AGG | 0.388153 | 8_1:+71517212 | Msa1211780:intron |
| TCAATTCTGTCTTGCAAGTC+GGG | 0.388164 | 8_1:+71518872 | Msa1211780:three_prime_UTR |
| TCCCAAAACTAGCTCCTTGC+TGG | 0.392681 | 8_1:+71518812 | Msa1211780:exon |
| CACAGTAACGTTTCAGCCAT+TGG | 0.394635 | 8_1:-71516659 | None:intergenic |
| AACGAAGATTGCTCAAGAAA+TGG | 0.395248 | 8_1:+71519066 | Msa1211780:three_prime_UTR |
| AGCTAACCAGAGGTTCTATT+AGG | 0.400370 | 8_1:-71517064 | None:intergenic |
| ACCTTAACTCTTCGCTCAAC+AGG | 0.406563 | 8_1:-71516956 | None:intergenic |
| TGGTGATCTGCACTCTCCTA+TGG | 0.407219 | 8_1:+71518895 | Msa1211780:three_prime_UTR |
| GATGCGTCACATCCATCATT+TGG | 0.413789 | 8_1:-71515356 | None:intergenic |
| TGCTGATTCCTTTGCATCAG+TGG | 0.422807 | 8_1:-71518678 | None:intergenic |
| GCTTGTTAAAGGCAGACCTT+TGG | 0.429462 | 8_1:+71516620 | Msa1211780:CDS |
| AGGCAGACCTTTGGACAACT+TGG | 0.430840 | 8_1:+71516629 | Msa1211780:CDS |
| GGCGACGAATATAGGCATAA+TGG | 0.437973 | 8_1:+71515102 | Msa1211780:CDS |
| GTGTTTGTTTCCTTGTAGCC+TGG | 0.438821 | 8_1:+71518954 | Msa1211780:three_prime_UTR |
| TCCTGTTGAGCGAAGAGTTA+AGG | 0.440147 | 8_1:+71516955 | Msa1211780:CDS |
| GCCAAGCCATTCAGGTCAAG+TGG | 0.449870 | 8_1:+71517220 | Msa1211780:CDS |
| GGCAGCATATTGAAGTTAGC+AGG | 0.450143 | 8_1:+71516598 | Msa1211780:intron |
| CCCACTTGACCTGAATGGCT+TGG | 0.452772 | 8_1:-71517221 | None:intergenic |
| GATATTGGTTAGGCTGCATC+TGG | 0.456922 | 8_1:+71515321 | Msa1211780:intron |
| GAAATCGAATGTGTGAAGTA+TGG | 0.463586 | 8_1:-71515001 | None:intergenic |
| GCAGGAACGAGATTCTGAAT+TGG | 0.472018 | 8_1:+71515143 | Msa1211780:CDS |
| ATGGATAGTGCATACTTTGT+CGG | 0.478923 | 8_1:+71515121 | Msa1211780:CDS |
| ATTATGAATAATTCTGGCTC+AGG | 0.480706 | 8_1:+71517028 | Msa1211780:CDS |
| CTGGGTCCTAATAGAACCTC+TGG | 0.483064 | 8_1:+71517058 | Msa1211780:CDS |
| GGTGATCTGCACTCTCCTAT+GGG | 0.489581 | 8_1:+71518896 | Msa1211780:three_prime_UTR |
| TTGTTTCCTTGTAGCCTGGA+TGG | 0.493950 | 8_1:+71518958 | Msa1211780:three_prime_UTR |
| TTCAATTCTGTCTTGCAAGT+CGG | 0.500090 | 8_1:+71518871 | Msa1211780:three_prime_UTR |
| TTGAAGAGAACAAGAAGAAG+AGG | 0.501035 | 8_1:-71515049 | None:intergenic |
| CCAAGCCATTCAGGTCAAGT+GGG | 0.506200 | 8_1:+71517221 | Msa1211780:CDS |
| GATTCAGACTTTGTCCAAAG+AGG | 0.513628 | 8_1:+71517273 | Msa1211780:CDS |
| ACAGCATTCATAGTTTGACT+TGG | 0.516250 | 8_1:-71518761 | None:intergenic |
| GCCATTCAGGTCAAGTGGGG+GGG | 0.520542 | 8_1:+71517225 | Msa1211780:CDS |
| CCAGAATTACAAAGTTCTGC+AGG | 0.524945 | 8_1:+71515524 | Msa1211780:CDS |
| GTAACAGCCACCTTGTGCAT+TGG | 0.529289 | 8_1:-71515390 | None:intergenic |
| GATTATCCATCCAGGCTACA+AGG | 0.539788 | 8_1:-71518964 | None:intergenic |
| CAAGCCATTCAGGTCAAGTG+GGG | 0.556541 | 8_1:+71517222 | Msa1211780:CDS |
| ATGATGGATGTGACGCATCA+AGG | 0.557465 | 8_1:+71515360 | Msa1211780:CDS |
| TATCATGTGATTATCCATCC+AGG | 0.557504 | 8_1:-71518972 | None:intergenic |
| TTTGTATGCCACTGATGCAA+AGG | 0.562050 | 8_1:+71518670 | Msa1211780:CDS |
| TGATGCAAAGGAATCAGCAC+TGG | 0.562436 | 8_1:+71518682 | Msa1211780:CDS |
| AAAGAGGCTAGCAAATGTCT+AGG | 0.562458 | 8_1:-71518839 | None:intergenic |
| AAGCCATTCAGGTCAAGTGG+GGG | 0.563374 | 8_1:+71517223 | Msa1211780:CDS |
| TGCTGTACAATGCCAAATGA+TGG | 0.564839 | 8_1:+71515344 | Msa1211780:CDS |
| CAGCATTCATAGTTTGACTT+GGG | 0.565837 | 8_1:-71518760 | None:intergenic |
| AAAAGTCTCTCTCTTTCTCA+AGG | 0.572348 | 8_1:-71517672 | None:intergenic |
| TTCTGGCTCAGGCAACACAC+TGG | 0.577044 | 8_1:+71517039 | Msa1211780:CDS |
| AGCCATTCAGGTCAAGTGGG+GGG | 0.577781 | 8_1:+71517224 | Msa1211780:CDS |
| ATAATCACATGATAAATGAC+TGG | 0.584555 | 8_1:+71518981 | Msa1211780:three_prime_UTR |
| ACATGGTGTTCTATGCCCAT+AGG | 0.592734 | 8_1:-71518911 | None:intergenic |
| ATGTGTGAAGTATGGTATTG+TGG | 0.593448 | 8_1:-71514993 | None:intergenic |
| ATAGTGCATACTTTGTCGGC+AGG | 0.594763 | 8_1:+71515125 | Msa1211780:CDS |
| ACAACTTGGAGTTCCTCCAA+TGG | 0.595027 | 8_1:+71516643 | Msa1211780:CDS |
| TACTGTGATTCTATTAATGG+CGG | 0.608916 | 8_1:+71516675 | Msa1211780:CDS |
| TCTGGCTCAGGCAACACACT+GGG | 0.611070 | 8_1:+71517040 | Msa1211780:CDS |
| ATTCTGTCTTGCAAGTCGGG+TGG | 0.613029 | 8_1:+71518875 | Msa1211780:three_prime_UTR |
| CATATGTCAGACTCCAGAAG+TGG | 0.613330 | 8_1:+71517723 | Msa1211780:CDS |
| ATGTCAGACTCCAGAAGTGG+AGG | 0.615946 | 8_1:+71517726 | Msa1211780:CDS |
| CAACAAGCTGAAAATTGACA+AGG | 0.634857 | 8_1:+71515554 | Msa1211780:CDS |
| TACTGATCTCAAATTTACAG+TGG | 0.646076 | 8_1:+71517645 | Msa1211780:CDS |
| AGGAACTCCAAGTTGTCCAA+AGG | 0.646182 | 8_1:-71516636 | None:intergenic |
| AGTAACGTTTCAGCCATTGG+AGG | 0.647456 | 8_1:-71516656 | None:intergenic |
| GTGAGAGATTGAGCTGAAGT+AGG | 0.649304 | 8_1:-71515174 | None:intergenic |
| AATGTCTAGGCATACCAGCA+AGG | 0.650422 | 8_1:-71518826 | None:intergenic |
| AGGAGTTGTTCCAATGCACA+AGG | 0.665845 | 8_1:+71515380 | Msa1211780:CDS |
| GTTGAGCGAAGAGTTAAGGT+CGG | 0.693286 | 8_1:+71516959 | Msa1211780:CDS |
| AGTCTCTCTCTTTCTCAAGG+CGG | 0.725031 | 8_1:-71517669 | None:intergenic |
| TGTGAAGTATGGTATTGTGG+TGG | 0.728673 | 8_1:-71514990 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATTTCTTCTTTATTATAATT+AGG | + | chr8_1:71515966-71515985 | Msa1211780:intron | 10.0% |
| !! | TAAAATTATATACAAATAAC+TGG | - | chr8_1:71517397-71517416 | None:intergenic | 10.0% |
| !!! | TTTGTATATAATTTTATATC+AGG | + | chr8_1:71517401-71517420 | Msa1211780:intron | 10.0% |
| !!! | TGAACTATAATTATTTTTTT+TGG | + | chr8_1:71518103-71518122 | Msa1211780:intron | 10.0% |
| !!! | TTATGCTTTATTTTTCTTTT+GGG | + | chr8_1:71515417-71515436 | Msa1211780:intron | 15.0% |
| !!! | TTTTTTATAATTTTGCATTG+TGG | + | chr8_1:71515454-71515473 | Msa1211780:intron | 15.0% |
| !!! | TTTTTATAATTTTGCATTGT+GGG | + | chr8_1:71515455-71515474 | Msa1211780:intron | 15.0% |
| !!! | AATCTACATTTCTTTATTTT+AGG | + | chr8_1:71515689-71515708 | Msa1211780:intron | 15.0% |
| !!! | TTTTTAGCTTTTTTTCTTAA+CGG | + | chr8_1:71516471-71516490 | Msa1211780:intron | 15.0% |
| !!! | GATAAAAGAAAATTTGTTAT+TGG | - | chr8_1:71517939-71517958 | None:intergenic | 15.0% |
| !!! | TAGACTGAATTATAAATTTT+AGG | + | chr8_1:71518126-71518145 | Msa1211780:intron | 15.0% |
| !!! | AGACTGAATTATAAATTTTA+GGG | + | chr8_1:71518127-71518146 | Msa1211780:intron | 15.0% |
| !!! | ACAAAACAGTTAATATATTT+TGG | - | chr8_1:71519103-71519122 | None:intergenic | 15.0% |
| !!! | GTTATGCTTTATTTTTCTTT+TGG | + | chr8_1:71515416-71515435 | Msa1211780:intron | 20.0% |
| !!! | TATGCTTTATTTTTCTTTTG+GGG | + | chr8_1:71515418-71515437 | Msa1211780:intron | 20.0% |
| !! | AAATAAGAAAGAAAGAATGT+TGG | + | chr8_1:71515628-71515647 | Msa1211780:intron | 20.0% |
| !! | AATAAGAAAGAAAGAATGTT+GGG | + | chr8_1:71515629-71515648 | Msa1211780:intron | 20.0% |
| !!! | TTCTTTATTTTAGGTTTCAA+TGG | + | chr8_1:71515698-71515717 | Msa1211780:intron | 20.0% |
| !! | TATGCATCAATAGAATTTAT+AGG | - | chr8_1:71516191-71516210 | None:intergenic | 20.0% |
| !!! | GGAATTTTTTATGTGTAATA+TGG | + | chr8_1:71516391-71516410 | Msa1211780:intron | 20.0% |
| !!! | TATTTTAAAAGATATGTGAG+TGG | - | chr8_1:71516825-71516844 | None:intergenic | 20.0% |
| !! | ACCAATATTATGAATAATTC+TGG | + | chr8_1:71517022-71517041 | Msa1211780:CDS | 20.0% |
| !! | CAAAAATTGTTATAAGCATA+TGG | - | chr8_1:71517314-71517333 | None:intergenic | 20.0% |
| !!! | CATATGCTTATAACAATTTT+TGG | + | chr8_1:71517312-71517331 | Msa1211780:intron | 20.0% |
| !!! | AAAAATTGCTTGTTCTTTTA+TGG | + | chr8_1:71517516-71517535 | Msa1211780:intron | 20.0% |
| !!! | AAAATTGCTTGTTCTTTTAT+GGG | + | chr8_1:71517517-71517536 | Msa1211780:intron | 20.0% |
| !! | TGAATTTCGTAATTTCTTTA+TGG | + | chr8_1:71517959-71517978 | Msa1211780:intron | 20.0% |
| !!! | ATAATTATAGTTCAAGTTTC+AGG | - | chr8_1:71518097-71518116 | None:intergenic | 20.0% |
| !! | AATAAATTCATTCTTAAACC+TGG | + | chr8_1:71518491-71518510 | Msa1211780:intron | 20.0% |
| !! | ATAAATTCATTCTTAAACCT+GGG | + | chr8_1:71518492-71518511 | Msa1211780:intron | 20.0% |
| !!! | AATTGAATTTGCTTAAAAAG+AGG | - | chr8_1:71518858-71518877 | None:intergenic | 20.0% |
| !!! | ATATGACAATTTTCATTACA+TGG | - | chr8_1:71518931-71518950 | None:intergenic | 20.0% |
| ! | AAAACATGCAAAAAGGATTA+GGG | - | chr8_1:71515227-71515246 | None:intergenic | 25.0% |
| ! | AAAAACATGCAAAAAGGATT+AGG | - | chr8_1:71515228-71515247 | None:intergenic | 25.0% |
| ! | ATTAGCAAAAACATGCAAAA+AGG | - | chr8_1:71515234-71515253 | None:intergenic | 25.0% |
| ! | TAGCTTATGACATATTCATA+AGG | - | chr8_1:71515844-71515863 | None:intergenic | 25.0% |
| ! | TCTATTGATGCATAATTTGA+CGG | + | chr8_1:71516197-71516216 | Msa1211780:intron | 25.0% |
| !!! | AGGGTTGATGATAAATATTA+GGG | - | chr8_1:71516292-71516311 | None:intergenic | 25.0% |
| ! | TACAATAGGAATTTAGAGAA+GGG | + | chr8_1:71516370-71516389 | Msa1211780:intron | 25.0% |
| ! | GATAACTTGAGATTAAAAAC+TGG | + | chr8_1:71516507-71516526 | Msa1211780:intron | 25.0% |
| ! | TGTTTATATATAGTGTCTCT+TGG | + | chr8_1:71516556-71516575 | Msa1211780:intron | 25.0% |
| ! | TATGTAGACACGTTAATAAT+TGG | - | chr8_1:71516757-71516776 | None:intergenic | 25.0% |
| !!! | CAGTGATTTTGATTTTTTCA+GGG | - | chr8_1:71516999-71517018 | None:intergenic | 25.0% |
| ! | GCCAGAATTATTCATAATAT+TGG | - | chr8_1:71517026-71517045 | None:intergenic | 25.0% |
| ! | ATTCATGTTGTAAAACCATT+AGG | - | chr8_1:71517133-71517152 | None:intergenic | 25.0% |
| ! | TAAAGAAAAGAGATGAGAAA+AGG | - | chr8_1:71517161-71517180 | None:intergenic | 25.0% |
| !!! | TCTTTATTTCCTTCTCTTTT+TGG | + | chr8_1:71517175-71517194 | Msa1211780:intron | 25.0% |
| !!! | TTGTTTTCTTTTGAGTATAG+TGG | + | chr8_1:71517198-71517217 | Msa1211780:intron | 25.0% |
| !! | AAAAGAACAAGCAATTTTTC+AGG | - | chr8_1:71517515-71517534 | None:intergenic | 25.0% |
| ! | AATTTCCCGATAAAAATATC+AGG | - | chr8_1:71517565-71517584 | None:intergenic | 25.0% |
| ! | CCTTTATTAGATTTCTTACA+GGG | - | chr8_1:71517756-71517775 | None:intergenic | 25.0% |
| ! | TAATTTCTTTATGGTTGACT+GGG | + | chr8_1:71517968-71517987 | Msa1211780:intron | 25.0% |
| !!! | TAGCATTTGTTTTGATTAGT+TGG | + | chr8_1:71518165-71518184 | Msa1211780:intron | 25.0% |
| ! | ACAAGTGATAATAATGTCAT+TGG | + | chr8_1:71518300-71518319 | Msa1211780:intron | 25.0% |
| ! | TATATAGTTGCAATTGGAAA+AGG | + | chr8_1:71518326-71518345 | Msa1211780:intron | 25.0% |
| ! | ATAATCACATGATAAATGAC+TGG | + | chr8_1:71518981-71519000 | Msa1211780:three_prime_UTR | 25.0% |
| !!! | ACAGTTAATATATTTTGGCT+AGG | - | chr8_1:71519098-71519117 | None:intergenic | 25.0% |
| ! | GTTGATCTTGTTTACGATAT+TGG | + | chr8_1:71515306-71515325 | Msa1211780:intron | 30.0% |
| ! | TCTTGTTTACGATATTGGTT+AGG | + | chr8_1:71515311-71515330 | Msa1211780:intron | 30.0% |
| !!! | TGCATTGTGGGTTTTATTAT+AGG | + | chr8_1:71515467-71515486 | Msa1211780:intron | 30.0% |
| ATGTTTATTCTTTAGCGTAG+CGG | + | chr8_1:71515665-71515684 | Msa1211780:intron | 30.0% | |
| AATGGAATGATTGAACACTT+GGG | + | chr8_1:71515716-71515735 | Msa1211780:intron | 30.0% | |
| !! | GCTGTTTTCATAAACTATCA+TGG | + | chr8_1:71515791-71515810 | Msa1211780:intron | 30.0% |
| TATTAAACGCTTGTTTCGAT+TGG | - | chr8_1:71515929-71515948 | None:intergenic | 30.0% | |
| AGCGTTTAATATCACATCAA+AGG | + | chr8_1:71515938-71515957 | Msa1211780:intron | 30.0% | |
| TGAATCTCATCTCATTAGTT+AGG | + | chr8_1:71516033-71516052 | Msa1211780:intron | 30.0% | |
| !! | CAGGGTTGATGATAAATATT+AGG | - | chr8_1:71516293-71516312 | None:intergenic | 30.0% |
| CTACAATAGGAATTTAGAGA+AGG | + | chr8_1:71516369-71516388 | Msa1211780:intron | 30.0% | |
| !! | ATGCTCAATCTCATTTTGAT+TGG | + | chr8_1:71516419-71516438 | Msa1211780:intron | 30.0% |
| !!! | TCAATCTCATTTTGATTGGT+AGG | + | chr8_1:71516423-71516442 | Msa1211780:intron | 30.0% |
| CGTTACTGTGATTCTATTAA+TGG | + | chr8_1:71516672-71516691 | Msa1211780:CDS | 30.0% | |
| TACTGTGATTCTATTAATGG+CGG | + | chr8_1:71516675-71516694 | Msa1211780:CDS | 30.0% | |
| !!! | TTGATTTTTTCAGGGAACTT+CGG | - | chr8_1:71516991-71517010 | None:intergenic | 30.0% |
| !!! | GCAGTGATTTTGATTTTTTC+AGG | - | chr8_1:71517000-71517019 | None:intergenic | 30.0% |
| !! | ATTATGAATAATTCTGGCTC+AGG | + | chr8_1:71517028-71517047 | Msa1211780:CDS | 30.0% |
| ! | ATGTTCAACATTTTGCCTAA+TGG | + | chr8_1:71517115-71517134 | Msa1211780:intron | 30.0% |
| AAAAGAGATGAGAAAAGGAA+AGG | - | chr8_1:71517156-71517175 | None:intergenic | 30.0% | |
| AGAAAACAACCAAAAAGAGA+AGG | - | chr8_1:71517187-71517206 | None:intergenic | 30.0% | |
| !! | GTACCACCTGATATTTTTAT+CGG | + | chr8_1:71517556-71517575 | Msa1211780:intron | 30.0% |
| !! | TACCACCTGATATTTTTATC+GGG | + | chr8_1:71517557-71517576 | Msa1211780:intron | 30.0% |
| AAGAGTAAAGAAGGGAATAA+CGG | - | chr8_1:71517605-71517624 | None:intergenic | 30.0% | |
| TACTGATCTCAAATTTACAG+TGG | + | chr8_1:71517645-71517664 | Msa1211780:CDS | 30.0% | |
| ! | ACTTTTACTTCGCAAAACTA+CGG | + | chr8_1:71517689-71517708 | Msa1211780:CDS | 30.0% |
| CCCTGTAAGAAATCTAATAA+AGG | + | chr8_1:71517753-71517772 | Msa1211780:intron | 30.0% | |
| GCCTTTATTAGATTTCTTAC+AGG | - | chr8_1:71517757-71517776 | None:intergenic | 30.0% | |
| GTAATTTCTTTATGGTTGAC+TGG | + | chr8_1:71517967-71517986 | Msa1211780:intron | 30.0% | |
| AATTTCTTTATGGTTGACTG+GGG | + | chr8_1:71517969-71517988 | Msa1211780:intron | 30.0% | |
| !! | AACTTTTTGAGCAAAAACTC+TGG | - | chr8_1:71518018-71518037 | None:intergenic | 30.0% |
| ! | GTTTTTGCTCAAAAAGTTGA+TGG | + | chr8_1:71518020-71518039 | Msa1211780:intron | 30.0% |
| !!! | CATTTGTTTTGATTAGTTGG+AGG | + | chr8_1:71518168-71518187 | Msa1211780:intron | 30.0% |
| AGCAGAATAATTGAACATAG+AGG | + | chr8_1:71518193-71518212 | Msa1211780:intron | 30.0% | |
| TAGATCTAGATAATGTGTAC+TGG | - | chr8_1:71518250-71518269 | None:intergenic | 30.0% | |
| TGGATCTATATAGTTGCAAT+TGG | + | chr8_1:71518320-71518339 | Msa1211780:intron | 30.0% | |
| !!! | TTGGTGACTTTTGTTTTCTT+TGG | + | chr8_1:71518351-71518370 | Msa1211780:intron | 30.0% |
| ATGTGTGAAGTATGGTATTG+TGG | - | chr8_1:71514996-71515015 | None:intergenic | 35.0% | |
| GAAATCGAATGTGTGAAGTA+TGG | - | chr8_1:71515004-71515023 | None:intergenic | 35.0% | |
| TTGAAGAGAACAAGAAGAAG+AGG | - | chr8_1:71515052-71515071 | None:intergenic | 35.0% | |
| TCTCTTTCTTTCTGCGAAAA+TGG | + | chr8_1:71515081-71515100 | Msa1211780:exon | 35.0% | |
| ATGGATAGTGCATACTTTGT+CGG | + | chr8_1:71515121-71515140 | Msa1211780:CDS | 35.0% | |
| TGCAAAAAGGATTAGGGTTA+GGG | - | chr8_1:71515221-71515240 | None:intergenic | 35.0% | |
| ATGCAAAAAGGATTAGGGTT+AGG | - | chr8_1:71515222-71515241 | None:intergenic | 35.0% | |
| CAACAAGCTGAAAATTGACA+AGG | + | chr8_1:71515554-71515573 | Msa1211780:CDS | 35.0% | |
| CAATGGAATGATTGAACACT+TGG | + | chr8_1:71515715-71515734 | Msa1211780:intron | 35.0% | |
| ! | GCTTATTTGAGTTTATCCTC+TGG | - | chr8_1:71515907-71515926 | None:intergenic | 35.0% |
| GAAGCATAGTGGTATGTTAT+AGG | - | chr8_1:71516073-71516092 | None:intergenic | 35.0% | |
| ! | TGAAAAAAGAGGAAGCATAG+TGG | - | chr8_1:71516084-71516103 | None:intergenic | 35.0% |
| !!! | TGCTTCCTCTTTTTTCAACT+CGG | + | chr8_1:71516087-71516106 | Msa1211780:intron | 35.0% |
| ATTTGGGGACATGTGAATTA+TGG | + | chr8_1:71516125-71516144 | Msa1211780:intron | 35.0% | |
| TTTGGGGACATGTGAATTAT+GGG | + | chr8_1:71516126-71516145 | Msa1211780:intron | 35.0% | |
| TCACCAGCATACTCTAATAT+TGG | + | chr8_1:71516315-71516334 | Msa1211780:intron | 35.0% | |
| CACCAGCATACTCTAATATT+GGG | + | chr8_1:71516316-71516335 | Msa1211780:intron | 35.0% | |
| ACCAGCATACTCTAATATTG+GGG | + | chr8_1:71516317-71516336 | Msa1211780:intron | 35.0% | |
| TATTGGGGAATTATCTCGTT+AGG | + | chr8_1:71516332-71516351 | Msa1211780:intron | 35.0% | |
| AATTATCTCGTTAGGCAAGT+TGG | + | chr8_1:71516340-71516359 | Msa1211780:intron | 35.0% | |
| CACTGAGAAATATGAATGCA+TGG | - | chr8_1:71516868-71516887 | None:intergenic | 35.0% | |
| AGGCAAAATGTTGAACATCT+TGG | - | chr8_1:71517113-71517132 | None:intergenic | 35.0% | |
| ! | TCCAAAGAGGTATATACGTT+AGG | + | chr8_1:71517286-71517305 | Msa1211780:intron | 35.0% |
| ACCTAACGTATATACCTCTT+TGG | - | chr8_1:71517290-71517309 | None:intergenic | 35.0% | |
| TAACACTTCATGGACTTCTT+AGG | - | chr8_1:71517352-71517371 | None:intergenic | 35.0% | |
| TGACATATTGTATACCACAG+GGG | - | chr8_1:71517471-71517490 | None:intergenic | 35.0% | |
| CTGACATATTGTATACCACA+GGG | - | chr8_1:71517472-71517491 | None:intergenic | 35.0% | |
| ACTGACATATTGTATACCAC+AGG | - | chr8_1:71517473-71517492 | None:intergenic | 35.0% | |
| TTCCCGATAAAAATATCAGG+TGG | - | chr8_1:71517562-71517581 | None:intergenic | 35.0% | |
| AGATCAGTAATCTGTGAAAC+AGG | - | chr8_1:71517634-71517653 | None:intergenic | 35.0% | |
| AAAAGTCTCTCTCTTTCTCA+AGG | - | chr8_1:71517675-71517694 | None:intergenic | 35.0% | |
| ! | CTTTTACTTCGCAAAACTAC+GGG | + | chr8_1:71517690-71517709 | Msa1211780:CDS | 35.0% |
| GAATCAGAGATTACATCACA+CGG | - | chr8_1:71517844-71517863 | None:intergenic | 35.0% | |
| !! | TTTTTGAGCAAAAACTCTGG+CGG | - | chr8_1:71518015-71518034 | None:intergenic | 35.0% |
| TTGACATGGATCTTGTTAAG+TGG | + | chr8_1:71518051-71518070 | Msa1211780:intron | 35.0% | |
| ATGGATCTTGTTAAGTGGAT+GGG | + | chr8_1:71518056-71518075 | Msa1211780:intron | 35.0% | |
| ! | CTGTTTCTTTAACCATCACA+AGG | + | chr8_1:71518389-71518408 | Msa1211780:intron | 35.0% |
| ATTCATTCTTAAACCTGGGT+TGG | + | chr8_1:71518496-71518515 | Msa1211780:intron | 35.0% | |
| ! | AGCTTGACTTTTACACTGAT+GGG | - | chr8_1:71518566-71518585 | None:intergenic | 35.0% |
| ! | CAGCATTCATAGTTTGACTT+GGG | - | chr8_1:71518763-71518782 | None:intergenic | 35.0% |
| ACAGCATTCATAGTTTGACT+TGG | - | chr8_1:71518764-71518783 | None:intergenic | 35.0% | |
| TTCAATTCTGTCTTGCAAGT+CGG | + | chr8_1:71518871-71518890 | Msa1211780:three_prime_UTR | 35.0% | |
| TATCATGTGATTATCCATCC+AGG | - | chr8_1:71518975-71518994 | None:intergenic | 35.0% | |
| AACGAAGATTGCTCAAGAAA+TGG | + | chr8_1:71519066-71519085 | Msa1211780:three_prime_UTR | 35.0% | |
| TGTGAAGTATGGTATTGTGG+TGG | - | chr8_1:71514993-71515012 | None:intergenic | 40.0% | |
| GCAAAAAGGATTAGGGTTAG+GGG | - | chr8_1:71515220-71515239 | None:intergenic | 40.0% | |
| TGCTGTACAATGCCAAATGA+TGG | + | chr8_1:71515344-71515363 | Msa1211780:CDS | 40.0% | |
| CCTGCAGAACTTTGTAATTC+TGG | - | chr8_1:71515527-71515546 | None:intergenic | 40.0% | |
| CCAGAATTACAAAGTTCTGC+AGG | + | chr8_1:71515524-71515543 | Msa1211780:CDS | 40.0% | |
| AACACTTGGGTCATGTAACA+CGG | + | chr8_1:71515729-71515748 | Msa1211780:intron | 40.0% | |
| AAGCACTTGTGACACTCTTT+GGG | - | chr8_1:71515881-71515900 | None:intergenic | 40.0% | |
| TAAGCACTTGTGACACTCTT+TGG | - | chr8_1:71515882-71515901 | None:intergenic | 40.0% | |
| ! | GGATACCGAGTTGAAAAAAG+AGG | - | chr8_1:71516095-71516114 | None:intergenic | 40.0% |
| GTATCCGATTGCTCTGATTT+GGG | + | chr8_1:71516109-71516128 | Msa1211780:intron | 40.0% | |
| ! | TATCCGATTGCTCTGATTTG+GGG | + | chr8_1:71516110-71516129 | Msa1211780:intron | 40.0% |
| GAGAAACACACTATTGACGA+TGG | - | chr8_1:71516164-71516183 | None:intergenic | 40.0% | |
| CGTCAATAGTGTGTTTCTCA+AGG | + | chr8_1:71516165-71516184 | Msa1211780:intron | 40.0% | |
| TCCCCAATATTAGAGTATGC+TGG | - | chr8_1:71516321-71516340 | None:intergenic | 40.0% | |
| AAGTTGGCTAAGGCTACAAT+AGG | + | chr8_1:71516356-71516375 | Msa1211780:intron | 40.0% | |
| GGCTTAACGTGACTATCATT+TGG | + | chr8_1:71516577-71516596 | Msa1211780:intron | 40.0% | |
| !! | GAAGTTAGCAGGCTTGTTAA+AGG | + | chr8_1:71516609-71516628 | Msa1211780:CDS | 40.0% |
| AGCTAACCAGAGGTTCTATT+AGG | - | chr8_1:71517067-71517086 | None:intergenic | 40.0% | |
| AAGAACTAGAAGCTAACCAG+AGG | - | chr8_1:71517077-71517096 | None:intergenic | 40.0% | |
| !! | TCTGGTTAGCTTCTAGTTCT+TGG | + | chr8_1:71517076-71517095 | Msa1211780:intron | 40.0% |
| GATTCAGACTTTGTCCAAAG+AGG | + | chr8_1:71517273-71517292 | Msa1211780:CDS | 40.0% | |
| ! | GTCCATGAAGTGTTACCAAA+CGG | + | chr8_1:71517357-71517376 | Msa1211780:intron | 40.0% |
| GAAACAGAATTTGCACCGTT+TGG | - | chr8_1:71517375-71517394 | None:intergenic | 40.0% | |
| !! | ATCAGGTGGTACAGTTTTAG+TGG | - | chr8_1:71517548-71517567 | None:intergenic | 40.0% |
| !! | GGAATAACGGACAAACAATG+AGG | - | chr8_1:71517592-71517611 | None:intergenic | 40.0% |
| GGAGACGAAAGAGTAAAGAA+GGG | - | chr8_1:71517613-71517632 | None:intergenic | 40.0% | |
| AGGAGACGAAAGAGTAAAGA+AGG | - | chr8_1:71517614-71517633 | None:intergenic | 40.0% | |
| CACGGAACAAGAGTCAAATT+AGG | - | chr8_1:71517826-71517845 | None:intergenic | 40.0% | |
| AAGACTTATCCCACTAAGTG+GGG | - | chr8_1:71517896-71517915 | None:intergenic | 40.0% | |
| CAAGACTTATCCCACTAAGT+GGG | - | chr8_1:71517897-71517916 | None:intergenic | 40.0% | |
| !! | TGATGGTTCTGACATTGACA+TGG | + | chr8_1:71518037-71518056 | Msa1211780:intron | 40.0% |
| CATGGATCTTGTTAAGTGGA+TGG | + | chr8_1:71518055-71518074 | Msa1211780:intron | 40.0% | |
| ATCTTGTTAAGTGGATGGGA+TGG | + | chr8_1:71518060-71518079 | Msa1211780:intron | 40.0% | |
| TCTTGTTAAGTGGATGGGAT+GGG | + | chr8_1:71518061-71518080 | Msa1211780:intron | 40.0% | |
| GTTGCAATTGGAAAAGGCTT+TGG | + | chr8_1:71518332-71518351 | Msa1211780:intron | 40.0% | |
| CAGAGTTACAATCCTTGTGA+TGG | - | chr8_1:71518404-71518423 | None:intergenic | 40.0% | |
| CATCACAAGGATTGTAACTC+TGG | + | chr8_1:71518402-71518421 | Msa1211780:intron | 40.0% | |
| !!! | CCACGTTCTGAAGGTATTTT+GGG | - | chr8_1:71518525-71518544 | None:intergenic | 40.0% |
| !!! | ACCACGTTCTGAAGGTATTT+TGG | - | chr8_1:71518526-71518545 | None:intergenic | 40.0% |
| ! | CAGCTTGACTTTTACACTGA+TGG | - | chr8_1:71518567-71518586 | None:intergenic | 40.0% |
| TTTGTATGCCACTGATGCAA+AGG | + | chr8_1:71518670-71518689 | Msa1211780:CDS | 40.0% | |
| AAAGAGGCTAGCAAATGTCT+AGG | - | chr8_1:71518842-71518861 | None:intergenic | 40.0% | |
| TCAATTCTGTCTTGCAAGTC+GGG | + | chr8_1:71518872-71518891 | Msa1211780:three_prime_UTR | 40.0% | |
| GCGAAAATGGCGACGAATAT+AGG | + | chr8_1:71515094-71515113 | Msa1211780:exon | 45.0% | |
| GGCGACGAATATAGGCATAA+TGG | + | chr8_1:71515102-71515121 | Msa1211780:CDS | 45.0% | |
| ATAGTGCATACTTTGTCGGC+AGG | + | chr8_1:71515125-71515144 | Msa1211780:CDS | 45.0% | |
| GCAGGAACGAGATTCTGAAT+TGG | + | chr8_1:71515143-71515162 | Msa1211780:CDS | 45.0% | |
| GTGAGAGATTGAGCTGAAGT+AGG | - | chr8_1:71515177-71515196 | None:intergenic | 45.0% | |
| AAGGATTAGGGTTAGGGGTT+TGG | - | chr8_1:71515215-71515234 | None:intergenic | 45.0% | |
| ! | GATATTGGTTAGGCTGCATC+TGG | + | chr8_1:71515321-71515340 | Msa1211780:intron | 45.0% |
| GATGCGTCACATCCATCATT+TGG | - | chr8_1:71515359-71515378 | None:intergenic | 45.0% | |
| !! | ATGATGGATGTGACGCATCA+AGG | + | chr8_1:71515360-71515379 | Msa1211780:CDS | 45.0% |
| AGGAGTTGTTCCAATGCACA+AGG | + | chr8_1:71515380-71515399 | Msa1211780:CDS | 45.0% | |
| AGTTGTTCCAATGCACAAGG+TGG | + | chr8_1:71515383-71515402 | Msa1211780:intron | 45.0% | |
| ACACTTGGGTCATGTAACAC+GGG | + | chr8_1:71515730-71515749 | Msa1211780:intron | 45.0% | |
| GGTATCCGATTGCTCTGATT+TGG | + | chr8_1:71516108-71516127 | Msa1211780:intron | 45.0% | |
| TGTCCCCAAATCAGAGCAAT+CGG | - | chr8_1:71516116-71516135 | None:intergenic | 45.0% | |
| CACTATTGACGATGGAAGCA+TGG | - | chr8_1:71516156-71516175 | None:intergenic | 45.0% | |
| ATGAACGAGGTTGTGGAACA+AGG | - | chr8_1:71516265-71516284 | None:intergenic | 45.0% | |
| ATATTAGGGCTGCATGAACG+AGG | - | chr8_1:71516278-71516297 | None:intergenic | 45.0% | |
| ! | TAGAGTATGCTGGTGATGCA+GGG | - | chr8_1:71516311-71516330 | None:intergenic | 45.0% |
| ! | TTAGAGTATGCTGGTGATGC+AGG | - | chr8_1:71516312-71516331 | None:intergenic | 45.0% |
| GGCAGCATATTGAAGTTAGC+AGG | + | chr8_1:71516598-71516617 | Msa1211780:intron | 45.0% | |
| ! | GCTTGTTAAAGGCAGACCTT+TGG | + | chr8_1:71516620-71516639 | Msa1211780:CDS | 45.0% |
| AGGAACTCCAAGTTGTCCAA+AGG | - | chr8_1:71516639-71516658 | None:intergenic | 45.0% | |
| ACAACTTGGAGTTCCTCCAA+TGG | + | chr8_1:71516643-71516662 | Msa1211780:CDS | 45.0% | |
| AGTAACGTTTCAGCCATTGG+AGG | - | chr8_1:71516659-71516678 | None:intergenic | 45.0% | |
| CACAGTAACGTTTCAGCCAT+TGG | - | chr8_1:71516662-71516681 | None:intergenic | 45.0% | |
| TCCTGTTGAGCGAAGAGTTA+AGG | + | chr8_1:71516955-71516974 | Msa1211780:CDS | 45.0% | |
| ACCTTAACTCTTCGCTCAAC+AGG | - | chr8_1:71516959-71516978 | None:intergenic | 45.0% | |
| GTTGAGCGAAGAGTTAAGGT+CGG | + | chr8_1:71516959-71516978 | Msa1211780:CDS | 45.0% | |
| !! | GGTTAGCTTCTAGTTCTTGG+TGG | + | chr8_1:71517079-71517098 | Msa1211780:intron | 45.0% |
| ! | CACCGTTTGGTAACACTTCA+TGG | - | chr8_1:71517362-71517381 | None:intergenic | 45.0% |
| AGTCTCTCTCTTTCTCAAGG+CGG | - | chr8_1:71517672-71517691 | None:intergenic | 45.0% | |
| CATATGTCAGACTCCAGAAG+TGG | + | chr8_1:71517723-71517742 | Msa1211780:CDS | 45.0% | |
| CCAAGACTTATCCCACTAAG+TGG | - | chr8_1:71517898-71517917 | None:intergenic | 45.0% | |
| CCACTTAGTGGGATAAGTCT+TGG | + | chr8_1:71517895-71517914 | Msa1211780:intron | 45.0% | |
| TCTTTATGGTTGACTGGGGA+TGG | + | chr8_1:71517973-71517992 | Msa1211780:intron | 45.0% | |
| CTTTATGGTTGACTGGGGAT+GGG | + | chr8_1:71517974-71517993 | Msa1211780:intron | 45.0% | |
| CTTGTTAAGTGGATGGGATG+GGG | + | chr8_1:71518062-71518081 | Msa1211780:intron | 45.0% | |
| !!! | GTATTTTGGGTTACCAACCC+AGG | - | chr8_1:71518512-71518531 | None:intergenic | 45.0% |
| CCCAAAATACCTTCAGAACG+TGG | + | chr8_1:71518522-71518541 | Msa1211780:intron | 45.0% | |
| TATGACTGACCACGTTCTGA+AGG | - | chr8_1:71518534-71518553 | None:intergenic | 45.0% | |
| !! | TGCTGATTCCTTTGCATCAG+TGG | - | chr8_1:71518681-71518700 | None:intergenic | 45.0% |
| TGATGCAAAGGAATCAGCAC+TGG | + | chr8_1:71518682-71518701 | Msa1211780:CDS | 45.0% | |
| !!! | ACCAGCAAGGAGCTAGTTTT+GGG | - | chr8_1:71518816-71518835 | None:intergenic | 45.0% |
| !! | TACCAGCAAGGAGCTAGTTT+TGG | - | chr8_1:71518817-71518836 | None:intergenic | 45.0% |
| AATGTCTAGGCATACCAGCA+AGG | - | chr8_1:71518829-71518848 | None:intergenic | 45.0% | |
| ACATGGTGTTCTATGCCCAT+AGG | - | chr8_1:71518914-71518933 | None:intergenic | 45.0% | |
| GTGTTTGTTTCCTTGTAGCC+TGG | + | chr8_1:71518954-71518973 | Msa1211780:three_prime_UTR | 45.0% | |
| TTGTTTCCTTGTAGCCTGGA+TGG | + | chr8_1:71518958-71518977 | Msa1211780:three_prime_UTR | 45.0% | |
| GATTATCCATCCAGGCTACA+AGG | - | chr8_1:71518967-71518986 | None:intergenic | 45.0% | |
| !!! | TATTTTTATTTTTATTTTGT+AGG | + | chr8_1:71516924-71516943 | Msa1211780:intron | 5.0% |
| GTAACAGCCACCTTGTGCAT+TGG | - | chr8_1:71515393-71515412 | None:intergenic | 50.0% | |
| GTCACAAGTGCTTATGCCAG+AGG | + | chr8_1:71515888-71515907 | Msa1211780:intron | 50.0% | |
| ! | ATTGACGATGGAAGCATGGC+TGG | - | chr8_1:71516152-71516171 | None:intergenic | 50.0% |
| ! | CTCGTTAGGCAAGTTGGCTA+AGG | + | chr8_1:71516346-71516365 | Msa1211780:intron | 50.0% |
| AGGCAGACCTTTGGACAACT+TGG | + | chr8_1:71516629-71516648 | Msa1211780:CDS | 50.0% | |
| CTGGGTCCTAATAGAACCTC+TGG | + | chr8_1:71517058-71517077 | Msa1211780:CDS | 50.0% | |
| GTATAGTGGCCAAGCCATTC+AGG | + | chr8_1:71517212-71517231 | Msa1211780:intron | 50.0% | |
| CCAAGCCATTCAGGTCAAGT+GGG | + | chr8_1:71517221-71517240 | Msa1211780:CDS | 50.0% | |
| CAAGCCATTCAGGTCAAGTG+GGG | + | chr8_1:71517222-71517241 | Msa1211780:CDS | 50.0% | |
| AAGCCATTCAGGTCAAGTGG+GGG | + | chr8_1:71517223-71517242 | Msa1211780:CDS | 50.0% | |
| !! | TATACCACAGGGGAGCATCA+GGG | - | chr8_1:71517461-71517480 | None:intergenic | 50.0% |
| ATGTCAGACTCCAGAAGTGG+AGG | + | chr8_1:71517726-71517745 | Msa1211780:CDS | 50.0% | |
| ACAGGGATATCCTCCACTTC+TGG | - | chr8_1:71517739-71517758 | None:intergenic | 50.0% | |
| CTTATCCCACTAAGTGGGGT+CGG | - | chr8_1:71517892-71517911 | None:intergenic | 50.0% | |
| TAAGTGGATGGGATGGGGAA+TGG | + | chr8_1:71518067-71518086 | Msa1211780:intron | 50.0% | |
| TCCCAAAACTAGCTCCTTGC+TGG | + | chr8_1:71518812-71518831 | Msa1211780:exon | 50.0% | |
| ATTCTGTCTTGCAAGTCGGG+TGG | + | chr8_1:71518875-71518894 | Msa1211780:three_prime_UTR | 50.0% | |
| TGGTGATCTGCACTCTCCTA+TGG | + | chr8_1:71518895-71518914 | Msa1211780:three_prime_UTR | 50.0% | |
| GGTGATCTGCACTCTCCTAT+GGG | + | chr8_1:71518896-71518915 | Msa1211780:three_prime_UTR | 50.0% | |
| GCGAAGAGTTAAGGTCGGCA+AGG | + | chr8_1:71516964-71516983 | Msa1211780:CDS | 55.0% | |
| !! | TTCTGGCTCAGGCAACACAC+TGG | + | chr8_1:71517039-71517058 | Msa1211780:CDS | 55.0% |
| ! | TCTGGCTCAGGCAACACACT+GGG | + | chr8_1:71517040-71517059 | Msa1211780:CDS | 55.0% |
| GCCAAGCCATTCAGGTCAAG+TGG | + | chr8_1:71517220-71517239 | Msa1211780:CDS | 55.0% | |
| CCCACTTGACCTGAATGGCT+TGG | - | chr8_1:71517224-71517243 | None:intergenic | 55.0% | |
| AGCCATTCAGGTCAAGTGGG+GGG | + | chr8_1:71517224-71517243 | Msa1211780:CDS | 55.0% | |
| ATTTCCCTGATGCTCCCCTG+TGG | + | chr8_1:71517454-71517473 | Msa1211780:intron | 55.0% | |
| !! | GTATACCACAGGGGAGCATC+AGG | - | chr8_1:71517462-71517481 | None:intergenic | 55.0% |
| ! | TGGGGTCGGCTCAACACTAT+TGG | - | chr8_1:71517878-71517897 | None:intergenic | 55.0% |
| TTGAGCCGACCCCACTTAGT+GGG | + | chr8_1:71517884-71517903 | Msa1211780:intron | 55.0% | |
| ATGGTTGACTGGGGATGGGA+CGG | + | chr8_1:71517978-71517997 | Msa1211780:intron | 55.0% | |
| GGGCTGCATGAACGAGGTTG+TGG | - | chr8_1:71516272-71516291 | None:intergenic | 60.0% | |
| GCCATTCAGGTCAAGTGGGG+GGG | + | chr8_1:71517225-71517244 | Msa1211780:CDS | 60.0% | |
| GTTGAGCCGACCCCACTTAG+TGG | + | chr8_1:71517883-71517902 | Msa1211780:intron | 60.0% | |
| TGGTTGACTGGGGATGGGAC+GGG | + | chr8_1:71517979-71517998 | Msa1211780:intron | 60.0% | |
| GCCCCCCCACTTGACCTGAA+TGG | - | chr8_1:71517229-71517248 | None:intergenic | 65.0% | |
| TTCAGGTCAAGTGGGGGGGC+AGG | + | chr8_1:71517229-71517248 | Msa1211780:CDS | 65.0% | |
| AGGTCAAGTGGGGGGGCAGG+TGG | + | chr8_1:71517232-71517251 | Msa1211780:CDS | 70.0% | |
| GGTCAAGTGGGGGGGCAGGT+GGG | + | chr8_1:71517233-71517252 | Msa1211780:CDS | 70.0% | |
| GTCAAGTGGGGGGGCAGGTG+GGG | + | chr8_1:71517234-71517253 | Msa1211780:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_1 | gene | 71514928 | 71519147 | 71514928 | ID=Msa1211780;Name=Msa1211780 |
| chr8_1 | mRNA | 71514928 | 71519147 | 71514928 | ID=Msa1211780-mRNA-1;Parent=Msa1211780;Name=Msa1211780-mRNA-1;_AED=0.13;_eAED=0.13;_QI=172|1|1|1|1|1|8|324|290 |
| chr8_1 | exon | 71514928 | 71515207 | 71514928 | ID=Msa1211780-mRNA-1:exon:24080;Parent=Msa1211780-mRNA-1 |
| chr8_1 | exon | 71515333 | 71515401 | 71515333 | ID=Msa1211780-mRNA-1:exon:24081;Parent=Msa1211780-mRNA-1 |
| chr8_1 | exon | 71515489 | 71515575 | 71515489 | ID=Msa1211780-mRNA-1:exon:24082;Parent=Msa1211780-mRNA-1 |
| chr8_1 | exon | 71516603 | 71516709 | 71516603 | ID=Msa1211780-mRNA-1:exon:24083;Parent=Msa1211780-mRNA-1 |
| chr8_1 | exon | 71516946 | 71517079 | 71516946 | ID=Msa1211780-mRNA-1:exon:24084;Parent=Msa1211780-mRNA-1 |
| chr8_1 | exon | 71517218 | 71517294 | 71517218 | ID=Msa1211780-mRNA-1:exon:24085;Parent=Msa1211780-mRNA-1 |
| chr8_1 | exon | 71517643 | 71517756 | 71517643 | ID=Msa1211780-mRNA-1:exon:24086;Parent=Msa1211780-mRNA-1 |
| chr8_1 | exon | 71518647 | 71519147 | 71518647 | ID=Msa1211780-mRNA-1:exon:24087;Parent=Msa1211780-mRNA-1 |
| chr8_1 | five_prime_UTR | 71514928 | 71515099 | 71514928 | ID=Msa1211780-mRNA-1:five_prime_utr;Parent=Msa1211780-mRNA-1 |
| chr8_1 | CDS | 71515100 | 71515207 | 71515100 | ID=Msa1211780-mRNA-1:cds;Parent=Msa1211780-mRNA-1 |
| chr8_1 | CDS | 71515333 | 71515401 | 71515333 | ID=Msa1211780-mRNA-1:cds;Parent=Msa1211780-mRNA-1 |
| chr8_1 | CDS | 71515489 | 71515575 | 71515489 | ID=Msa1211780-mRNA-1:cds;Parent=Msa1211780-mRNA-1 |
| chr8_1 | CDS | 71516603 | 71516709 | 71516603 | ID=Msa1211780-mRNA-1:cds;Parent=Msa1211780-mRNA-1 |
| chr8_1 | CDS | 71516946 | 71517079 | 71516946 | ID=Msa1211780-mRNA-1:cds;Parent=Msa1211780-mRNA-1 |
| chr8_1 | CDS | 71517218 | 71517294 | 71517218 | ID=Msa1211780-mRNA-1:cds;Parent=Msa1211780-mRNA-1 |
| chr8_1 | CDS | 71517643 | 71517756 | 71517643 | ID=Msa1211780-mRNA-1:cds;Parent=Msa1211780-mRNA-1 |
| chr8_1 | CDS | 71518647 | 71518823 | 71518647 | ID=Msa1211780-mRNA-1:cds;Parent=Msa1211780-mRNA-1 |
| chr8_1 | three_prime_UTR | 71518824 | 71519147 | 71518824 | ID=Msa1211780-mRNA-1:three_prime_utr;Parent=Msa1211780-mRNA-1 |
| Gene Sequence |
| Protein sequence |
