Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1299650 | XP_003609049.1 | 99.655 | 290 | 1 | 0 | 1 | 290 | 1 | 290 | 0.0 | 601 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1299650 | sp|Q9FJJ5|EB1B_ARATH | 68.914 | 267 | 77 | 2 | 1 | 264 | 1 | 264 | 2.98e-134 | 384 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1299650 | G7JQX9 | 99.655 | 290 | 1 | 0 | 1 | 290 | 1 | 290 | 0.0 | 601 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0610690 | Msa1299650 | 0.805736 | 1.155677e-49 | -8.615850e-47 |
| Msa0621320 | Msa1299650 | 0.800252 | 1.572610e-48 | -8.615850e-47 |
| Msa0660370 | Msa1299650 | 0.806257 | 8.983171e-50 | -8.615850e-47 |
| Msa0675120 | Msa1299650 | 0.833735 | 4.495120e-56 | -8.615850e-47 |
| Msa0700120 | Msa1299650 | 0.807964 | 3.907228e-50 | -8.615850e-47 |
| Msa0831220 | Msa1299650 | 0.812380 | 4.364940e-51 | -8.615850e-47 |
| Msa0124910 | Msa1299650 | 0.803846 | 2.868074e-49 | -8.615850e-47 |
| Msa0135840 | Msa1299650 | 0.808073 | 3.705234e-50 | -8.615850e-47 |
| Msa1259160 | Msa1299650 | 0.998008 | 5.500126e-254 | -8.615850e-47 |
| Msa1299650 | Msa1375280 | 0.804501 | 2.095989e-49 | -8.615850e-47 |
| Msa1299650 | Msa1381260 | 0.806914 | 6.526378e-50 | -8.615850e-47 |
| Msa1299650 | Msa1449780 | 0.804759 | 1.851291e-49 | -8.615850e-47 |
| Msa1299650 | Msa1462740 | 0.801331 | 9.470847e-49 | -8.615850e-47 |
| Msa0368640 | Msa1299650 | 0.829870 | 4.040610e-55 | -8.615850e-47 |
| Msa0480280 | Msa1299650 | 0.846277 | 2.402525e-59 | -8.615850e-47 |
| Msa0982650 | Msa1299650 | 0.808161 | 3.548466e-50 | -8.615850e-47 |
| Msa1074900 | Msa1299650 | 0.801344 | 9.411447e-49 | -8.615850e-47 |
| Msa1083700 | Msa1299650 | 0.813608 | 2.348430e-51 | -8.615850e-47 |
| Msa1104110 | Msa1299650 | 0.809536 | 1.802539e-50 | -8.615850e-47 |
| Msa0281470 | Msa1299650 | 0.807530 | 4.832836e-50 | -8.615850e-47 |
| Msa0339020 | Msa1299650 | 0.807929 | 3.975312e-50 | -8.615850e-47 |
| Msa1112890 | Msa1299650 | 0.807435 | 5.061682e-50 | -8.615850e-47 |
| Msa1147700 | Msa1299650 | 0.803943 | 2.738679e-49 | -8.615850e-47 |
| Msa1210040 | Msa1299650 | 0.991258 | 1.051041e-186 | -8.615850e-47 |
| Msa1211780 | Msa1299650 | 0.838514 | 2.748213e-57 | -8.615850e-47 |
| Msa1219930 | Msa1299650 | 0.815258 | 1.013748e-51 | -8.615850e-47 |
| Msa0519810 | Msa1299650 | 0.813420 | 2.582533e-51 | -8.615850e-47 |
| Msa0519840 | Msa1299650 | 0.800765 | 1.235945e-48 | -8.615850e-47 |
| Msa0540670 | Msa1299650 | 0.838872 | 2.221886e-57 | -8.615850e-47 |
| Msa0579080 | Msa1299650 | 0.840124 | 1.050586e-57 | -8.615850e-47 |
| Msa0579160 | Msa1299650 | 0.824223 | 9.068910e-54 | -8.615850e-47 |
| Msa0579220 | Msa1299650 | 0.823345 | 1.456232e-53 | -8.615850e-47 |
| Msa0851850 | Msa1299650 | 0.820830 | 5.574558e-53 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1299650 | MtrunA17_Chr4g0060561 | 99.655 | 290 | 1 | 0 | 1 | 290 | 1 | 290 | 0.0 | 601 |
| Msa1299650 | MtrunA17_Chr3g0092651 | 76.190 | 273 | 60 | 3 | 1 | 271 | 1 | 270 | 6.88e-154 | 431 |
| Msa1299650 | MtrunA17_Chr5g0401741 | 56.071 | 280 | 105 | 4 | 1 | 266 | 1 | 276 | 3.46e-104 | 306 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1299650 | AT5G62500.1 | 68.914 | 267 | 77 | 2 | 1 | 264 | 1 | 264 | 3.03e-135 | 384 |
| Msa1299650 | AT3G47690.1 | 69.888 | 269 | 68 | 4 | 1 | 266 | 1 | 259 | 2.04e-134 | 382 |
| Msa1299650 | AT5G67270.1 | 52.574 | 272 | 108 | 3 | 1 | 255 | 1 | 268 | 6.60e-100 | 296 |
Find 78 sgRNAs with CRISPR-Local
Find 269 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACAAAACAGTTAATATATTT+TGG | 0.140591 | 8_3:-60961029 | None:intergenic |
| CCTGCAGAAGTTTGTAATTC+TGG | 0.195394 | 8_3:-60957467 | None:intergenic |
| CGTTACTGTGATTCTATTAA+TGG | 0.196750 | 8_3:+60958595 | Msa1299650:CDS |
| TCTCTTTCTTTCTGCGAAAA+TGG | 0.203212 | 8_3:+60957026 | Msa1299650:exon |
| GCCAGAATTATTCATAATAT+TGG | 0.260420 | 8_3:-60958948 | None:intergenic |
| GCGAAAATGGCGACGAATAT+AGG | 0.272527 | 8_3:+60957039 | Msa1299650:exon |
| ACCAATATTATGAATAATTC+TGG | 0.280217 | 8_3:+60958947 | Msa1299650:CDS |
| TACCAGCAAGGAGCTAGTTT+TGG | 0.281303 | 8_3:-60960743 | None:intergenic |
| ACAGGGATATCCTCCACTTC+TGG | 0.363729 | 8_3:-60959661 | None:intergenic |
| GAAGTTAGCAGGCTTGTTAA+AGG | 0.368713 | 8_3:+60958532 | Msa1299650:CDS |
| ACCTAACGTATATACCTCTT+TGG | 0.375890 | 8_3:-60959212 | None:intergenic |
| GTATAGTGGCCAAGCCATTC+AGG | 0.388153 | 8_3:+60959137 | Msa1299650:intron |
| TCAATTCTGTCTTGCAAGTC+GGG | 0.388164 | 8_3:+60960801 | Msa1299650:three_prime_UTR |
| TCCCAAAACTAGCTCCTTGC+TGG | 0.392681 | 8_3:+60960741 | Msa1299650:exon |
| CACAGTAACGTTTCAGCCAT+TGG | 0.394635 | 8_3:-60958582 | None:intergenic |
| AACGAAGATTGCTCAAGAAA+TGG | 0.395248 | 8_3:+60960995 | Msa1299650:three_prime_UTR |
| AGCTAACCAGAGGTTCTATT+AGG | 0.400370 | 8_3:-60958989 | None:intergenic |
| ACCTTAACTCTTCGCTCAAC+AGG | 0.406563 | 8_3:-60958881 | None:intergenic |
| TGGTGATCTGCACTCTCCTA+TGG | 0.407219 | 8_3:+60960824 | Msa1299650:three_prime_UTR |
| GATGCGTCACATCCATCATT+TGG | 0.413789 | 8_3:-60957298 | None:intergenic |
| TGCTGATTCCTTTGCATCAG+TGG | 0.422807 | 8_3:-60960607 | None:intergenic |
| GCTTGTTAAAGGCAGACCTT+TGG | 0.429462 | 8_3:+60958543 | Msa1299650:CDS |
| AGGCAGACCTTTGGACAACT+TGG | 0.430840 | 8_3:+60958552 | Msa1299650:CDS |
| GGCGACGAATATAGGCATAA+TGG | 0.437973 | 8_3:+60957047 | Msa1299650:CDS |
| GTGTTTGTTTCCTTGTAGCC+TGG | 0.438821 | 8_3:+60960883 | Msa1299650:three_prime_UTR |
| TCCTGTTGAGCGAAGAGTTA+AGG | 0.440147 | 8_3:+60958880 | Msa1299650:CDS |
| GCCAAGCCATTCAGGTCAAG+TGG | 0.449870 | 8_3:+60959145 | Msa1299650:CDS |
| GGCAGCATATTGAAGTTAGC+AGG | 0.450143 | 8_3:+60958521 | Msa1299650:intron |
| CCCACTTGACCTGAATGGCT+TGG | 0.452772 | 8_3:-60959146 | None:intergenic |
| GATATTGGTTAGGCTGCATC+TGG | 0.461979 | 8_3:+60957263 | Msa1299650:intron |
| GAAATCGAATGTGTGAAGTA+TGG | 0.463586 | 8_3:-60956946 | None:intergenic |
| GCAGGAACGAGATTCTGAAT+TGG | 0.472018 | 8_3:+60957088 | Msa1299650:CDS |
| ATGGATAGTGCATACTTTGT+CGG | 0.478923 | 8_3:+60957066 | Msa1299650:CDS |
| ATTATGAATAATTCTGGCTC+AGG | 0.480706 | 8_3:+60958953 | Msa1299650:CDS |
| CTGGGTCCTAATAGAACCTC+TGG | 0.483064 | 8_3:+60958983 | Msa1299650:CDS |
| GGTGATCTGCACTCTCCTAT+GGG | 0.489581 | 8_3:+60960825 | Msa1299650:three_prime_UTR |
| TTGTTTCCTTGTAGCCTGGA+TGG | 0.493950 | 8_3:+60960887 | Msa1299650:three_prime_UTR |
| TTCAATTCTGTCTTGCAAGT+CGG | 0.500090 | 8_3:+60960800 | Msa1299650:three_prime_UTR |
| TTGAAGAGAACAAGAAGAAG+AGG | 0.501035 | 8_3:-60956994 | None:intergenic |
| CCAAGCCATTCAGGTCAAGT+GGG | 0.506200 | 8_3:+60959146 | Msa1299650:CDS |
| GATTCAGACTTTGTCCAAAG+AGG | 0.513628 | 8_3:+60959198 | Msa1299650:CDS |
| ACAGCATTCATAGTTTGACT+TGG | 0.516250 | 8_3:-60960690 | None:intergenic |
| CCAGAATTACAAACTTCTGC+AGG | 0.520419 | 8_3:+60957467 | Msa1299650:CDS |
| GCCATTCAGGTCAAGTGGGG+GGG | 0.520542 | 8_3:+60959150 | Msa1299650:CDS |
| GTAACAGCCACCTTGTGCAT+TGG | 0.529289 | 8_3:-60957332 | None:intergenic |
| GATTATCCATCCAGGCTACA+AGG | 0.539788 | 8_3:-60960893 | None:intergenic |
| AAAGAGGCTAGCAAATGTCT+TGG | 0.540733 | 8_3:-60960768 | None:intergenic |
| CAAGCCATTCAGGTCAAGTG+GGG | 0.556541 | 8_3:+60959147 | Msa1299650:CDS |
| ATGATGGATGTGACGCATCA+AGG | 0.557465 | 8_3:+60957302 | Msa1299650:CDS |
| TATCATGTGATTATCCATCC+AGG | 0.557504 | 8_3:-60960901 | None:intergenic |
| TTTGTATGCCACTGATGCAA+AGG | 0.562050 | 8_3:+60960599 | Msa1299650:CDS |
| TGATGCAAAGGAATCAGCAC+TGG | 0.562436 | 8_3:+60960611 | Msa1299650:CDS |
| AAGCCATTCAGGTCAAGTGG+GGG | 0.563374 | 8_3:+60959148 | Msa1299650:CDS |
| TGCTGTACAATGCCAAATGA+TGG | 0.564839 | 8_3:+60957286 | Msa1299650:CDS |
| CAGCATTCATAGTTTGACTT+GGG | 0.565837 | 8_3:-60960689 | None:intergenic |
| AAAAGTCTCTCTCTTTCTCA+AGG | 0.572348 | 8_3:-60959597 | None:intergenic |
| TTCTGGCTCAGGCAACACAC+TGG | 0.577044 | 8_3:+60958964 | Msa1299650:CDS |
| AGCCATTCAGGTCAAGTGGG+GGG | 0.577781 | 8_3:+60959149 | Msa1299650:CDS |
| ATAATCACATGATAAATGAC+TGG | 0.584555 | 8_3:+60960910 | Msa1299650:three_prime_UTR |
| ACATGGTGTTCTATGCCCAT+AGG | 0.592734 | 8_3:-60960840 | None:intergenic |
| ATGTGTGAAGTATGGTATTG+TGG | 0.593448 | 8_3:-60956938 | None:intergenic |
| ATAGTGCATACTTTGTCGGC+AGG | 0.594763 | 8_3:+60957070 | Msa1299650:CDS |
| ACAACTTGGAGTTCCTCCAA+TGG | 0.595027 | 8_3:+60958566 | Msa1299650:CDS |
| TACTGTGATTCTATTAATGG+CGG | 0.608916 | 8_3:+60958598 | Msa1299650:CDS |
| TCTGGCTCAGGCAACACACT+GGG | 0.611070 | 8_3:+60958965 | Msa1299650:CDS |
| ATTCTGTCTTGCAAGTCGGG+TGG | 0.613029 | 8_3:+60960804 | Msa1299650:three_prime_UTR |
| CATATGTCAGACTCCAGAAG+TGG | 0.613330 | 8_3:+60959648 | Msa1299650:CDS |
| ATGTCAGACTCCAGAAGTGG+AGG | 0.615946 | 8_3:+60959651 | Msa1299650:CDS |
| CAACAAGCTGAAAATTGACA+AGG | 0.632418 | 8_3:+60957497 | Msa1299650:CDS |
| TACTGATCTCAAATTTACAG+TGG | 0.646076 | 8_3:+60959570 | Msa1299650:CDS |
| AGGAACTCCAAGTTGTCCAA+AGG | 0.646182 | 8_3:-60958559 | None:intergenic |
| AGTAACGTTTCAGCCATTGG+AGG | 0.647456 | 8_3:-60958579 | None:intergenic |
| GTGAGAGATTGAGCTGAAGT+AGG | 0.649304 | 8_3:-60957119 | None:intergenic |
| AATGTCTTGGCATACCAGCA+AGG | 0.650422 | 8_3:-60960755 | None:intergenic |
| AGGAGTTGTTCCAATGCACA+AGG | 0.665845 | 8_3:+60957322 | Msa1299650:CDS |
| GTTGAGCGAAGAGTTAAGGT+CGG | 0.693286 | 8_3:+60958884 | Msa1299650:CDS |
| AGTCTCTCTCTTTCTCAAGG+CGG | 0.725031 | 8_3:-60959594 | None:intergenic |
| TGTGAAGTATGGTATTGTGG+TGG | 0.728673 | 8_3:-60956935 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATTTCTTCTTTATTATAATT+AGG | + | chr8_3:60957904-60957923 | Msa1299650:intron | 10.0% |
| !! | TAAAATTATATACAAATAAC+TGG | - | chr8_3:60959322-60959341 | None:intergenic | 10.0% |
| !!! | TTTGTATATAATTTTATATC+AGG | + | chr8_3:60959326-60959345 | Msa1299650:intron | 10.0% |
| !!! | TGAACTATAATTATTTTTTT+TGG | + | chr8_3:60960031-60960050 | Msa1299650:intron | 10.0% |
| !!! | TTATGCTTTATTTTTCTTTT+GGG | + | chr8_3:60957359-60957378 | Msa1299650:intron | 15.0% |
| !!! | TTTTTTATAATTTTGCATTG+TGG | + | chr8_3:60957397-60957416 | Msa1299650:intron | 15.0% |
| !!! | TTTTTATAATTTTGCATTGT+GGG | + | chr8_3:60957398-60957417 | Msa1299650:intron | 15.0% |
| !!! | AATCTACATTTCTTTATTTT+AGG | + | chr8_3:60957627-60957646 | Msa1299650:intron | 15.0% |
| !!! | TATTTTAAAAGATATGTGAA+TGG | - | chr8_3:60958750-60958769 | None:intergenic | 15.0% |
| !!! | GATAAAAGAAAATTTGTTAT+TGG | - | chr8_3:60959867-60959886 | None:intergenic | 15.0% |
| !!! | TAGACTGAATTATAAATTTT+AGG | + | chr8_3:60960054-60960073 | Msa1299650:intron | 15.0% |
| !!! | AGACTGAATTATAAATTTTA+GGG | + | chr8_3:60960055-60960074 | Msa1299650:intron | 15.0% |
| !!! | ACAAAACAGTTAATATATTT+TGG | - | chr8_3:60961032-60961051 | None:intergenic | 15.0% |
| !!! | GTTATGCTTTATTTTTCTTT+TGG | + | chr8_3:60957358-60957377 | Msa1299650:intron | 20.0% |
| !!! | TATGCTTTATTTTTCTTTTG+GGG | + | chr8_3:60957360-60957379 | Msa1299650:intron | 20.0% |
| !! | AAATAAGAAAGAAAGAATGT+TGG | + | chr8_3:60957566-60957585 | Msa1299650:intron | 20.0% |
| !! | AATAAGAAAGAAAGAATGTT+GGG | + | chr8_3:60957567-60957586 | Msa1299650:intron | 20.0% |
| !!! | ATTTTTATTCTTTAGCATAG+CGG | + | chr8_3:60957603-60957622 | Msa1299650:intron | 20.0% |
| !!! | TTCTTTATTTTAGGTTTCAA+TGG | + | chr8_3:60957636-60957655 | Msa1299650:intron | 20.0% |
| !! | TATGCATCAATAGAATTTAT+AGG | - | chr8_3:60958129-60958148 | None:intergenic | 20.0% |
| !!! | GGAATTTTTTATGTGTAATA+TGG | + | chr8_3:60958322-60958341 | Msa1299650:intron | 20.0% |
| !! | ACCAATATTATGAATAATTC+TGG | + | chr8_3:60958947-60958966 | Msa1299650:CDS | 20.0% |
| !! | CAAAAATTGTTATAAGCATA+TGG | - | chr8_3:60959239-60959258 | None:intergenic | 20.0% |
| !!! | CATATGCTTATAACAATTTT+TGG | + | chr8_3:60959237-60959256 | Msa1299650:intron | 20.0% |
| !!! | AAAAATTGCTTGTTCTTTTA+TGG | + | chr8_3:60959441-60959460 | Msa1299650:intron | 20.0% |
| !!! | AAAATTGCTTGTTCTTTTAT+GGG | + | chr8_3:60959442-60959461 | Msa1299650:intron | 20.0% |
| !! | TGAATTTCGTAATTTCTTTA+TGG | + | chr8_3:60959887-60959906 | Msa1299650:intron | 20.0% |
| !!! | ATAATTATAGTTCAAGTTTC+AGG | - | chr8_3:60960025-60960044 | None:intergenic | 20.0% |
| !! | AATAAATTCATTCTTAAACC+TGG | + | chr8_3:60960420-60960439 | Msa1299650:intron | 20.0% |
| !! | ATAAATTCATTCTTAAACCT+GGG | + | chr8_3:60960421-60960440 | Msa1299650:intron | 20.0% |
| !!! | AATTGAATTTGCTTAAAAAG+AGG | - | chr8_3:60960787-60960806 | None:intergenic | 20.0% |
| !!! | ATATGACAATTTTCATTACA+TGG | - | chr8_3:60960860-60960879 | None:intergenic | 20.0% |
| ! | AAAACATGCAAAAAGGATTA+GGG | - | chr8_3:60957172-60957191 | None:intergenic | 25.0% |
| ! | AAAAACATGCAAAAAGGATT+AGG | - | chr8_3:60957173-60957192 | None:intergenic | 25.0% |
| ! | ATTAGCAAAAACATGCAAAA+AGG | - | chr8_3:60957179-60957198 | None:intergenic | 25.0% |
| !! | GTTGATCTTGTTTATGATAT+TGG | + | chr8_3:60957248-60957267 | Msa1299650:intron | 25.0% |
| !! | TCTTGTTTATGATATTGGTT+AGG | + | chr8_3:60957253-60957272 | Msa1299650:intron | 25.0% |
| ! | TAGCTTATGACATATTCATA+AGG | - | chr8_3:60957782-60957801 | None:intergenic | 25.0% |
| ! | TCTATTGATGCATAATTTGA+CGG | + | chr8_3:60958135-60958154 | Msa1299650:intron | 25.0% |
| ! | GTGATGCATGATAAATATTA+GGG | - | chr8_3:60958230-60958249 | None:intergenic | 25.0% |
| ! | TACAATAGGAATTTAGAGAA+GGG | + | chr8_3:60958301-60958320 | Msa1299650:intron | 25.0% |
| !!! | ATGTGAGCTTTTTTTCTTAA+CGG | + | chr8_3:60958394-60958413 | Msa1299650:intron | 25.0% |
| ! | GATAACTTGAGATTAAAAAC+TGG | + | chr8_3:60958430-60958449 | Msa1299650:intron | 25.0% |
| ! | TGTTTATATATAGTGTCTCT+TGG | + | chr8_3:60958479-60958498 | Msa1299650:intron | 25.0% |
| ! | TATGTAGACACGTTAATAAT+TGG | - | chr8_3:60958680-60958699 | None:intergenic | 25.0% |
| !!! | CAGTGATTTTGATTTTTTCA+GGG | - | chr8_3:60958924-60958943 | None:intergenic | 25.0% |
| ! | GCCAGAATTATTCATAATAT+TGG | - | chr8_3:60958951-60958970 | None:intergenic | 25.0% |
| ! | ATTCATGTTGTAAAACCATT+AGG | - | chr8_3:60959058-60959077 | None:intergenic | 25.0% |
| ! | TAAAGAAAAGAGATGAGAAA+AGG | - | chr8_3:60959086-60959105 | None:intergenic | 25.0% |
| !!! | TCTTTATTTCCTTCTCTTTT+TGG | + | chr8_3:60959100-60959119 | Msa1299650:intron | 25.0% |
| !!! | TTGTTTTCTTTTGAGTATAG+TGG | + | chr8_3:60959123-60959142 | Msa1299650:intron | 25.0% |
| !! | AAAAGAACAAGCAATTTTTC+AGG | - | chr8_3:60959440-60959459 | None:intergenic | 25.0% |
| ! | AATTTCCCGATAAAAATATC+AGG | - | chr8_3:60959490-60959509 | None:intergenic | 25.0% |
| ! | CCTTTATTAGATTTCTTACA+GGG | - | chr8_3:60959681-60959700 | None:intergenic | 25.0% |
| ! | TAATTTCTTTATGGTTGACT+GGG | + | chr8_3:60959896-60959915 | Msa1299650:intron | 25.0% |
| !!! | TAGCATTTGTTTTGATTAGT+TGG | + | chr8_3:60960093-60960112 | Msa1299650:intron | 25.0% |
| ! | ACAAGTGATAATAATGTCAT+TGG | + | chr8_3:60960229-60960248 | Msa1299650:intron | 25.0% |
| ! | TATATAGTTGCAATTGGAAA+AGG | + | chr8_3:60960255-60960274 | Msa1299650:intron | 25.0% |
| ! | ATAATCACATGATAAATGAC+TGG | + | chr8_3:60960910-60960929 | Msa1299650:three_prime_UTR | 25.0% |
| !!! | ACAGTTAATATATTTTGGCT+AGG | - | chr8_3:60961027-60961046 | None:intergenic | 25.0% |
| !!! | TGCATTGTGGGTTTTATTAT+AGG | + | chr8_3:60957410-60957429 | Msa1299650:intron | 30.0% |
| AATGGAATGATTGAACACTT+GGG | + | chr8_3:60957654-60957673 | Msa1299650:intron | 30.0% | |
| !! | GCTGTTTTCATAAACTATCA+TGG | + | chr8_3:60957729-60957748 | Msa1299650:intron | 30.0% |
| TATTAAACGCTTGTTTCGAT+TGG | - | chr8_3:60957867-60957886 | None:intergenic | 30.0% | |
| AGCGTTTAATATCACATCAA+AGG | + | chr8_3:60957876-60957895 | Msa1299650:intron | 30.0% | |
| TGAATCTCATCTCATTAGTT+AGG | + | chr8_3:60957971-60957990 | Msa1299650:intron | 30.0% | |
| GGTGATGCATGATAAATATT+AGG | - | chr8_3:60958231-60958250 | None:intergenic | 30.0% | |
| TATTGGGGAATTATCTCTTT+AGG | + | chr8_3:60958263-60958282 | Msa1299650:intron | 30.0% | |
| AATTATCTCTTTAGGCAAGT+TGG | + | chr8_3:60958271-60958290 | Msa1299650:intron | 30.0% | |
| CTACAATAGGAATTTAGAGA+AGG | + | chr8_3:60958300-60958319 | Msa1299650:intron | 30.0% | |
| !! | ATGCTCAATCTCATTTTGAT+TGG | + | chr8_3:60958350-60958369 | Msa1299650:intron | 30.0% |
| !!! | TCAATCTCATTTTGATTGGT+AGG | + | chr8_3:60958354-60958373 | Msa1299650:intron | 30.0% |
| CGTTACTGTGATTCTATTAA+TGG | + | chr8_3:60958595-60958614 | Msa1299650:CDS | 30.0% | |
| TACTGTGATTCTATTAATGG+CGG | + | chr8_3:60958598-60958617 | Msa1299650:CDS | 30.0% | |
| !!! | TTGATTTTTTCAGGGAACTT+CGG | - | chr8_3:60958916-60958935 | None:intergenic | 30.0% |
| !!! | GCAGTGATTTTGATTTTTTC+AGG | - | chr8_3:60958925-60958944 | None:intergenic | 30.0% |
| !! | ATTATGAATAATTCTGGCTC+AGG | + | chr8_3:60958953-60958972 | Msa1299650:CDS | 30.0% |
| ! | ATGTTCAACATTTTGCCTAA+TGG | + | chr8_3:60959040-60959059 | Msa1299650:intron | 30.0% |
| AAAAGAGATGAGAAAAGGAA+AGG | - | chr8_3:60959081-60959100 | None:intergenic | 30.0% | |
| AGAAAACAACCAAAAAGAGA+AGG | - | chr8_3:60959112-60959131 | None:intergenic | 30.0% | |
| !! | GTACCACCTGATATTTTTAT+CGG | + | chr8_3:60959481-60959500 | Msa1299650:intron | 30.0% |
| !! | TACCACCTGATATTTTTATC+GGG | + | chr8_3:60959482-60959501 | Msa1299650:intron | 30.0% |
| TACTGATCTCAAATTTACAG+TGG | + | chr8_3:60959570-60959589 | Msa1299650:CDS | 30.0% | |
| ! | ACTTTTACTTCGCAAAACTA+CGG | + | chr8_3:60959614-60959633 | Msa1299650:CDS | 30.0% |
| CCCTGTAAGAAATCTAATAA+AGG | + | chr8_3:60959678-60959697 | Msa1299650:intron | 30.0% | |
| GCCTTTATTAGATTTCTTAC+AGG | - | chr8_3:60959682-60959701 | None:intergenic | 30.0% | |
| GTAATTTCTTTATGGTTGAC+TGG | + | chr8_3:60959895-60959914 | Msa1299650:intron | 30.0% | |
| AATTTCTTTATGGTTGACTG+GGG | + | chr8_3:60959897-60959916 | Msa1299650:intron | 30.0% | |
| !! | AACTTTTTGAGCAAAAACTC+TGG | - | chr8_3:60959946-60959965 | None:intergenic | 30.0% |
| ! | GTTTTTGCTCAAAAAGTTGA+TGG | + | chr8_3:60959948-60959967 | Msa1299650:intron | 30.0% |
| !!! | CATTTGTTTTGATTAGTTGG+AGG | + | chr8_3:60960096-60960115 | Msa1299650:intron | 30.0% |
| AGCAGAATAATTGAACATAG+AGG | + | chr8_3:60960121-60960140 | Msa1299650:intron | 30.0% | |
| TAGATCTAGATAATGTGTAC+TGG | - | chr8_3:60960178-60960197 | None:intergenic | 30.0% | |
| TGGATCTATATAGTTGCAAT+TGG | + | chr8_3:60960249-60960268 | Msa1299650:intron | 30.0% | |
| !!! | TTGGTGACTTTTGTTTTCTT+TGG | + | chr8_3:60960280-60960299 | Msa1299650:intron | 30.0% |
| ATGTGTGAAGTATGGTATTG+TGG | - | chr8_3:60956941-60956960 | None:intergenic | 35.0% | |
| GAAATCGAATGTGTGAAGTA+TGG | - | chr8_3:60956949-60956968 | None:intergenic | 35.0% | |
| TTGAAGAGAACAAGAAGAAG+AGG | - | chr8_3:60956997-60957016 | None:intergenic | 35.0% | |
| TCTCTTTCTTTCTGCGAAAA+TGG | + | chr8_3:60957026-60957045 | Msa1299650:exon | 35.0% | |
| ATGGATAGTGCATACTTTGT+CGG | + | chr8_3:60957066-60957085 | Msa1299650:CDS | 35.0% | |
| TGCAAAAAGGATTAGGGTTA+GGG | - | chr8_3:60957166-60957185 | None:intergenic | 35.0% | |
| ATGCAAAAAGGATTAGGGTT+AGG | - | chr8_3:60957167-60957186 | None:intergenic | 35.0% | |
| CAACAAGCTGAAAATTGACA+AGG | + | chr8_3:60957497-60957516 | Msa1299650:CDS | 35.0% | |
| CAATGGAATGATTGAACACT+TGG | + | chr8_3:60957653-60957672 | Msa1299650:intron | 35.0% | |
| ! | GCTTATTTGAGTTTATCCTC+TGG | - | chr8_3:60957845-60957864 | None:intergenic | 35.0% |
| GAAGCATAGTGGTATGTTAT+AGG | - | chr8_3:60958011-60958030 | None:intergenic | 35.0% | |
| ! | TGAAAAAAGAGGAAGCATAG+TGG | - | chr8_3:60958022-60958041 | None:intergenic | 35.0% |
| !!! | TGCTTCCTCTTTTTTCAACT+CGG | + | chr8_3:60958025-60958044 | Msa1299650:intron | 35.0% |
| TCACCAGCATACTCTAATAT+TGG | + | chr8_3:60958246-60958265 | Msa1299650:intron | 35.0% | |
| CACCAGCATACTCTAATATT+GGG | + | chr8_3:60958247-60958266 | Msa1299650:intron | 35.0% | |
| ACCAGCATACTCTAATATTG+GGG | + | chr8_3:60958248-60958267 | Msa1299650:intron | 35.0% | |
| CACTGAGAAATATGAATGCA+TGG | - | chr8_3:60958793-60958812 | None:intergenic | 35.0% | |
| AGGCAAAATGTTGAACATCT+TGG | - | chr8_3:60959038-60959057 | None:intergenic | 35.0% | |
| ! | TCCAAAGAGGTATATACGTT+AGG | + | chr8_3:60959211-60959230 | Msa1299650:intron | 35.0% |
| ACCTAACGTATATACCTCTT+TGG | - | chr8_3:60959215-60959234 | None:intergenic | 35.0% | |
| TAACACTTCATGGACTTCTT+AGG | - | chr8_3:60959277-60959296 | None:intergenic | 35.0% | |
| TGACATATTGTATACCACAG+GGG | - | chr8_3:60959396-60959415 | None:intergenic | 35.0% | |
| CTGACATATTGTATACCACA+GGG | - | chr8_3:60959397-60959416 | None:intergenic | 35.0% | |
| ACTGACATATTGTATACCAC+AGG | - | chr8_3:60959398-60959417 | None:intergenic | 35.0% | |
| TTCCCGATAAAAATATCAGG+TGG | - | chr8_3:60959487-60959506 | None:intergenic | 35.0% | |
| AAGAGTAAAGAAGGGAATGA+CGG | - | chr8_3:60959530-60959549 | None:intergenic | 35.0% | |
| AGATCAGTAATCTGTGAAAC+AGG | - | chr8_3:60959559-60959578 | None:intergenic | 35.0% | |
| AAAAGTCTCTCTCTTTCTCA+AGG | - | chr8_3:60959600-60959619 | None:intergenic | 35.0% | |
| ! | CTTTTACTTCGCAAAACTAC+GGG | + | chr8_3:60959615-60959634 | Msa1299650:CDS | 35.0% |
| GAATCAGAGATTACATCACA+CGG | - | chr8_3:60959769-60959788 | None:intergenic | 35.0% | |
| !! | TTTTTGAGCAAAAACTCTGG+CGG | - | chr8_3:60959943-60959962 | None:intergenic | 35.0% |
| TTGACATGGATCTTGTTAAG+TGG | + | chr8_3:60959979-60959998 | Msa1299650:intron | 35.0% | |
| ATGGATCTTGTTAAGTGGAT+GGG | + | chr8_3:60959984-60960003 | Msa1299650:intron | 35.0% | |
| ! | CTGTTTCTTTAACCATCACA+AGG | + | chr8_3:60960318-60960337 | Msa1299650:intron | 35.0% |
| ATTCATTCTTAAACCTGGGT+TGG | + | chr8_3:60960425-60960444 | Msa1299650:intron | 35.0% | |
| ! | AGCTTGACTTTTACACTGAT+GGG | - | chr8_3:60960495-60960514 | None:intergenic | 35.0% |
| TTGTTACATGTTCTCTATGC+AGG | + | chr8_3:60960554-60960573 | Msa1299650:intron | 35.0% | |
| ! | CAGCATTCATAGTTTGACTT+GGG | - | chr8_3:60960692-60960711 | None:intergenic | 35.0% |
| ACAGCATTCATAGTTTGACT+TGG | - | chr8_3:60960693-60960712 | None:intergenic | 35.0% | |
| TTCAATTCTGTCTTGCAAGT+CGG | + | chr8_3:60960800-60960819 | Msa1299650:three_prime_UTR | 35.0% | |
| TATCATGTGATTATCCATCC+AGG | - | chr8_3:60960904-60960923 | None:intergenic | 35.0% | |
| AACGAAGATTGCTCAAGAAA+TGG | + | chr8_3:60960995-60961014 | Msa1299650:three_prime_UTR | 35.0% | |
| TGTGAAGTATGGTATTGTGG+TGG | - | chr8_3:60956938-60956957 | None:intergenic | 40.0% | |
| GCAAAAAGGATTAGGGTTAG+GGG | - | chr8_3:60957165-60957184 | None:intergenic | 40.0% | |
| TGCTGTACAATGCCAAATGA+TGG | + | chr8_3:60957286-60957305 | Msa1299650:CDS | 40.0% | |
| CCTGCAGAAGTTTGTAATTC+TGG | - | chr8_3:60957470-60957489 | None:intergenic | 40.0% | |
| CCAGAATTACAAACTTCTGC+AGG | + | chr8_3:60957467-60957486 | Msa1299650:CDS | 40.0% | |
| AACACTTGGGTCATGTAACA+CGG | + | chr8_3:60957667-60957686 | Msa1299650:intron | 40.0% | |
| AAGCACTTGTGACACTCTTT+GGG | - | chr8_3:60957819-60957838 | None:intergenic | 40.0% | |
| TAAGCACTTGTGACACTCTT+TGG | - | chr8_3:60957820-60957839 | None:intergenic | 40.0% | |
| ! | GGATACCGAGTTGAAAAAAG+AGG | - | chr8_3:60958033-60958052 | None:intergenic | 40.0% |
| GTATCCGATTGCTCTGATTT+GGG | + | chr8_3:60958047-60958066 | Msa1299650:intron | 40.0% | |
| ! | TATCCGATTGCTCTGATTTG+GGG | + | chr8_3:60958048-60958067 | Msa1299650:intron | 40.0% |
| ATTTGGGGACATGTGAAGTA+TGG | + | chr8_3:60958063-60958082 | Msa1299650:intron | 40.0% | |
| TTTGGGGACATGTGAAGTAT+GGG | + | chr8_3:60958064-60958083 | Msa1299650:intron | 40.0% | |
| GAGAAACACACTATTGACGA+TGG | - | chr8_3:60958102-60958121 | None:intergenic | 40.0% | |
| CGTCAATAGTGTGTTTCTCA+AGG | + | chr8_3:60958103-60958122 | Msa1299650:intron | 40.0% | |
| TCCCCAATATTAGAGTATGC+TGG | - | chr8_3:60958252-60958271 | None:intergenic | 40.0% | |
| AAGTTGGCTAAGGCTACAAT+AGG | + | chr8_3:60958287-60958306 | Msa1299650:intron | 40.0% | |
| GGCTTAACGTGACTATCATT+TGG | + | chr8_3:60958500-60958519 | Msa1299650:intron | 40.0% | |
| !! | GAAGTTAGCAGGCTTGTTAA+AGG | + | chr8_3:60958532-60958551 | Msa1299650:CDS | 40.0% |
| AGCTAACCAGAGGTTCTATT+AGG | - | chr8_3:60958992-60959011 | None:intergenic | 40.0% | |
| AAGAACTAGAAGCTAACCAG+AGG | - | chr8_3:60959002-60959021 | None:intergenic | 40.0% | |
| !! | TCTGGTTAGCTTCTAGTTCT+TGG | + | chr8_3:60959001-60959020 | Msa1299650:intron | 40.0% |
| GATTCAGACTTTGTCCAAAG+AGG | + | chr8_3:60959198-60959217 | Msa1299650:CDS | 40.0% | |
| ! | GTCCATGAAGTGTTACCAAA+CGG | + | chr8_3:60959282-60959301 | Msa1299650:intron | 40.0% |
| GAAACAGAATTTGCACCGTT+TGG | - | chr8_3:60959300-60959319 | None:intergenic | 40.0% | |
| !! | ATCAGGTGGTACAGTTTTAG+TGG | - | chr8_3:60959473-60959492 | None:intergenic | 40.0% |
| GGAGACGAAAGAGTAAAGAA+GGG | - | chr8_3:60959538-60959557 | None:intergenic | 40.0% | |
| AGGAGACGAAAGAGTAAAGA+AGG | - | chr8_3:60959539-60959558 | None:intergenic | 40.0% | |
| CACGGAACAAGAGTCAAATT+AGG | - | chr8_3:60959751-60959770 | None:intergenic | 40.0% | |
| AAGACTTATCCCACTAAGTG+GGG | - | chr8_3:60959821-60959840 | None:intergenic | 40.0% | |
| CAAGACTTATCCCACTAAGT+GGG | - | chr8_3:60959822-60959841 | None:intergenic | 40.0% | |
| !! | TGATGGTTCTGACATTGACA+TGG | + | chr8_3:60959965-60959984 | Msa1299650:intron | 40.0% |
| CATGGATCTTGTTAAGTGGA+TGG | + | chr8_3:60959983-60960002 | Msa1299650:intron | 40.0% | |
| ATCTTGTTAAGTGGATGGGA+TGG | + | chr8_3:60959988-60960007 | Msa1299650:intron | 40.0% | |
| TCTTGTTAAGTGGATGGGAT+GGG | + | chr8_3:60959989-60960008 | Msa1299650:intron | 40.0% | |
| GTTGCAATTGGAAAAGGCTT+TGG | + | chr8_3:60960261-60960280 | Msa1299650:intron | 40.0% | |
| CAGAGTTACAATCCTTGTGA+TGG | - | chr8_3:60960333-60960352 | None:intergenic | 40.0% | |
| CATCACAAGGATTGTAACTC+TGG | + | chr8_3:60960331-60960350 | Msa1299650:intron | 40.0% | |
| !!! | CCACGTTCTGAAGGTATTTT+GGG | - | chr8_3:60960454-60960473 | None:intergenic | 40.0% |
| !!! | ACCACGTTCTGAAGGTATTT+TGG | - | chr8_3:60960455-60960474 | None:intergenic | 40.0% |
| ! | CAGCTTGACTTTTACACTGA+TGG | - | chr8_3:60960496-60960515 | None:intergenic | 40.0% |
| TTTGTATGCCACTGATGCAA+AGG | + | chr8_3:60960599-60960618 | Msa1299650:CDS | 40.0% | |
| AAAGAGGCTAGCAAATGTCT+TGG | - | chr8_3:60960771-60960790 | None:intergenic | 40.0% | |
| TCAATTCTGTCTTGCAAGTC+GGG | + | chr8_3:60960801-60960820 | Msa1299650:three_prime_UTR | 40.0% | |
| GCGAAAATGGCGACGAATAT+AGG | + | chr8_3:60957039-60957058 | Msa1299650:exon | 45.0% | |
| GGCGACGAATATAGGCATAA+TGG | + | chr8_3:60957047-60957066 | Msa1299650:CDS | 45.0% | |
| ATAGTGCATACTTTGTCGGC+AGG | + | chr8_3:60957070-60957089 | Msa1299650:CDS | 45.0% | |
| GCAGGAACGAGATTCTGAAT+TGG | + | chr8_3:60957088-60957107 | Msa1299650:CDS | 45.0% | |
| GTGAGAGATTGAGCTGAAGT+AGG | - | chr8_3:60957122-60957141 | None:intergenic | 45.0% | |
| AAGGATTAGGGTTAGGGGTT+TGG | - | chr8_3:60957160-60957179 | None:intergenic | 45.0% | |
| ! | GATATTGGTTAGGCTGCATC+TGG | + | chr8_3:60957263-60957282 | Msa1299650:intron | 45.0% |
| GATGCGTCACATCCATCATT+TGG | - | chr8_3:60957301-60957320 | None:intergenic | 45.0% | |
| !! | ATGATGGATGTGACGCATCA+AGG | + | chr8_3:60957302-60957321 | Msa1299650:CDS | 45.0% |
| AGGAGTTGTTCCAATGCACA+AGG | + | chr8_3:60957322-60957341 | Msa1299650:CDS | 45.0% | |
| AGTTGTTCCAATGCACAAGG+TGG | + | chr8_3:60957325-60957344 | Msa1299650:intron | 45.0% | |
| ACACTTGGGTCATGTAACAC+GGG | + | chr8_3:60957668-60957687 | Msa1299650:intron | 45.0% | |
| GGTATCCGATTGCTCTGATT+TGG | + | chr8_3:60958046-60958065 | Msa1299650:intron | 45.0% | |
| TGTCCCCAAATCAGAGCAAT+CGG | - | chr8_3:60958054-60958073 | None:intergenic | 45.0% | |
| CACTATTGACGATGGAAGCA+TGG | - | chr8_3:60958094-60958113 | None:intergenic | 45.0% | |
| ATGAACGAGGTTGTGGAACA+AGG | - | chr8_3:60958203-60958222 | None:intergenic | 45.0% | |
| ATATTAGGGCTGCATGAACG+AGG | - | chr8_3:60958216-60958235 | None:intergenic | 45.0% | |
| ! | CTCTTTAGGCAAGTTGGCTA+AGG | + | chr8_3:60958277-60958296 | Msa1299650:intron | 45.0% |
| GGCAGCATATTGAAGTTAGC+AGG | + | chr8_3:60958521-60958540 | Msa1299650:intron | 45.0% | |
| ! | GCTTGTTAAAGGCAGACCTT+TGG | + | chr8_3:60958543-60958562 | Msa1299650:CDS | 45.0% |
| AGGAACTCCAAGTTGTCCAA+AGG | - | chr8_3:60958562-60958581 | None:intergenic | 45.0% | |
| ACAACTTGGAGTTCCTCCAA+TGG | + | chr8_3:60958566-60958585 | Msa1299650:CDS | 45.0% | |
| AGTAACGTTTCAGCCATTGG+AGG | - | chr8_3:60958582-60958601 | None:intergenic | 45.0% | |
| CACAGTAACGTTTCAGCCAT+TGG | - | chr8_3:60958585-60958604 | None:intergenic | 45.0% | |
| TCCTGTTGAGCGAAGAGTTA+AGG | + | chr8_3:60958880-60958899 | Msa1299650:CDS | 45.0% | |
| ACCTTAACTCTTCGCTCAAC+AGG | - | chr8_3:60958884-60958903 | None:intergenic | 45.0% | |
| GTTGAGCGAAGAGTTAAGGT+CGG | + | chr8_3:60958884-60958903 | Msa1299650:CDS | 45.0% | |
| !! | GGTTAGCTTCTAGTTCTTGG+TGG | + | chr8_3:60959004-60959023 | Msa1299650:intron | 45.0% |
| ! | CACCGTTTGGTAACACTTCA+TGG | - | chr8_3:60959287-60959306 | None:intergenic | 45.0% |
| !! | GGAATGACGGACAAACAATG+AGG | - | chr8_3:60959517-60959536 | None:intergenic | 45.0% |
| AGTCTCTCTCTTTCTCAAGG+CGG | - | chr8_3:60959597-60959616 | None:intergenic | 45.0% | |
| CATATGTCAGACTCCAGAAG+TGG | + | chr8_3:60959648-60959667 | Msa1299650:CDS | 45.0% | |
| CCAAGACTTATCCCACTAAG+TGG | - | chr8_3:60959823-60959842 | None:intergenic | 45.0% | |
| CCACTTAGTGGGATAAGTCT+TGG | + | chr8_3:60959820-60959839 | Msa1299650:intron | 45.0% | |
| TCTTTATGGTTGACTGGGGA+TGG | + | chr8_3:60959901-60959920 | Msa1299650:intron | 45.0% | |
| CTTTATGGTTGACTGGGGAT+GGG | + | chr8_3:60959902-60959921 | Msa1299650:intron | 45.0% | |
| CTTGTTAAGTGGATGGGATG+GGG | + | chr8_3:60959990-60960009 | Msa1299650:intron | 45.0% | |
| !!! | GTATTTTGGGTTACCAACCC+AGG | - | chr8_3:60960441-60960460 | None:intergenic | 45.0% |
| CCCAAAATACCTTCAGAACG+TGG | + | chr8_3:60960451-60960470 | Msa1299650:intron | 45.0% | |
| TATGACTGACCACGTTCTGA+AGG | - | chr8_3:60960463-60960482 | None:intergenic | 45.0% | |
| !! | TGCTGATTCCTTTGCATCAG+TGG | - | chr8_3:60960610-60960629 | None:intergenic | 45.0% |
| TGATGCAAAGGAATCAGCAC+TGG | + | chr8_3:60960611-60960630 | Msa1299650:CDS | 45.0% | |
| !!! | ACCAGCAAGGAGCTAGTTTT+GGG | - | chr8_3:60960745-60960764 | None:intergenic | 45.0% |
| !! | TACCAGCAAGGAGCTAGTTT+TGG | - | chr8_3:60960746-60960765 | None:intergenic | 45.0% |
| AATGTCTTGGCATACCAGCA+AGG | - | chr8_3:60960758-60960777 | None:intergenic | 45.0% | |
| ACATGGTGTTCTATGCCCAT+AGG | - | chr8_3:60960843-60960862 | None:intergenic | 45.0% | |
| GTGTTTGTTTCCTTGTAGCC+TGG | + | chr8_3:60960883-60960902 | Msa1299650:three_prime_UTR | 45.0% | |
| TTGTTTCCTTGTAGCCTGGA+TGG | + | chr8_3:60960887-60960906 | Msa1299650:three_prime_UTR | 45.0% | |
| GATTATCCATCCAGGCTACA+AGG | - | chr8_3:60960896-60960915 | None:intergenic | 45.0% | |
| !!! | TATTTTTATTTTTATTTTGT+AGG | + | chr8_3:60958849-60958868 | Msa1299650:intron | 5.0% |
| GTAACAGCCACCTTGTGCAT+TGG | - | chr8_3:60957335-60957354 | None:intergenic | 50.0% | |
| GTCACAAGTGCTTATGCCAG+AGG | + | chr8_3:60957826-60957845 | Msa1299650:intron | 50.0% | |
| ! | ATTGACGATGGAAGCATGGC+TGG | - | chr8_3:60958090-60958109 | None:intergenic | 50.0% |
| AGGCAGACCTTTGGACAACT+TGG | + | chr8_3:60958552-60958571 | Msa1299650:CDS | 50.0% | |
| CTGGGTCCTAATAGAACCTC+TGG | + | chr8_3:60958983-60959002 | Msa1299650:CDS | 50.0% | |
| GTATAGTGGCCAAGCCATTC+AGG | + | chr8_3:60959137-60959156 | Msa1299650:intron | 50.0% | |
| CCAAGCCATTCAGGTCAAGT+GGG | + | chr8_3:60959146-60959165 | Msa1299650:CDS | 50.0% | |
| CAAGCCATTCAGGTCAAGTG+GGG | + | chr8_3:60959147-60959166 | Msa1299650:CDS | 50.0% | |
| AAGCCATTCAGGTCAAGTGG+GGG | + | chr8_3:60959148-60959167 | Msa1299650:CDS | 50.0% | |
| !! | TATACCACAGGGGAGCATCA+GGG | - | chr8_3:60959386-60959405 | None:intergenic | 50.0% |
| ATGTCAGACTCCAGAAGTGG+AGG | + | chr8_3:60959651-60959670 | Msa1299650:CDS | 50.0% | |
| ACAGGGATATCCTCCACTTC+TGG | - | chr8_3:60959664-60959683 | None:intergenic | 50.0% | |
| CTTATCCCACTAAGTGGGGT+CGG | - | chr8_3:60959817-60959836 | None:intergenic | 50.0% | |
| TAAGTGGATGGGATGGGGAA+TGG | + | chr8_3:60959995-60960014 | Msa1299650:intron | 50.0% | |
| TCCCAAAACTAGCTCCTTGC+TGG | + | chr8_3:60960741-60960760 | Msa1299650:exon | 50.0% | |
| ATTCTGTCTTGCAAGTCGGG+TGG | + | chr8_3:60960804-60960823 | Msa1299650:three_prime_UTR | 50.0% | |
| TGGTGATCTGCACTCTCCTA+TGG | + | chr8_3:60960824-60960843 | Msa1299650:three_prime_UTR | 50.0% | |
| GGTGATCTGCACTCTCCTAT+GGG | + | chr8_3:60960825-60960844 | Msa1299650:three_prime_UTR | 50.0% | |
| GCGAAGAGTTAAGGTCGGCA+AGG | + | chr8_3:60958889-60958908 | Msa1299650:CDS | 55.0% | |
| !! | TTCTGGCTCAGGCAACACAC+TGG | + | chr8_3:60958964-60958983 | Msa1299650:CDS | 55.0% |
| ! | TCTGGCTCAGGCAACACACT+GGG | + | chr8_3:60958965-60958984 | Msa1299650:CDS | 55.0% |
| GCCAAGCCATTCAGGTCAAG+TGG | + | chr8_3:60959145-60959164 | Msa1299650:CDS | 55.0% | |
| CCCACTTGACCTGAATGGCT+TGG | - | chr8_3:60959149-60959168 | None:intergenic | 55.0% | |
| AGCCATTCAGGTCAAGTGGG+GGG | + | chr8_3:60959149-60959168 | Msa1299650:CDS | 55.0% | |
| ATTTCCCTGATGCTCCCCTG+TGG | + | chr8_3:60959379-60959398 | Msa1299650:intron | 55.0% | |
| !! | GTATACCACAGGGGAGCATC+AGG | - | chr8_3:60959387-60959406 | None:intergenic | 55.0% |
| ! | TGGGGTCGGCTCAACACTAT+TGG | - | chr8_3:60959803-60959822 | None:intergenic | 55.0% |
| TTGAGCCGACCCCACTTAGT+GGG | + | chr8_3:60959809-60959828 | Msa1299650:intron | 55.0% | |
| ATGGTTGACTGGGGATGGGA+CGG | + | chr8_3:60959906-60959925 | Msa1299650:intron | 55.0% | |
| GGGCTGCATGAACGAGGTTG+TGG | - | chr8_3:60958210-60958229 | None:intergenic | 60.0% | |
| GCCATTCAGGTCAAGTGGGG+GGG | + | chr8_3:60959150-60959169 | Msa1299650:CDS | 60.0% | |
| GTTGAGCCGACCCCACTTAG+TGG | + | chr8_3:60959808-60959827 | Msa1299650:intron | 60.0% | |
| TGGTTGACTGGGGATGGGAC+GGG | + | chr8_3:60959907-60959926 | Msa1299650:intron | 60.0% | |
| GCCCCCCCACTTGACCTGAA+TGG | - | chr8_3:60959154-60959173 | None:intergenic | 65.0% | |
| TTCAGGTCAAGTGGGGGGGC+AGG | + | chr8_3:60959154-60959173 | Msa1299650:CDS | 65.0% | |
| AGGTCAAGTGGGGGGGCAGG+TGG | + | chr8_3:60959157-60959176 | Msa1299650:CDS | 70.0% | |
| GGTCAAGTGGGGGGGCAGGT+GGG | + | chr8_3:60959158-60959177 | Msa1299650:CDS | 70.0% | |
| GTCAAGTGGGGGGGCAGGTG+GGG | + | chr8_3:60959159-60959178 | Msa1299650:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_3 | gene | 60956873 | 60961076 | 60956873 | ID=Msa1299650;Name=Msa1299650 |
| chr8_3 | mRNA | 60956873 | 60961076 | 60956873 | ID=Msa1299650-mRNA-1;Parent=Msa1299650;Name=Msa1299650-mRNA-1;_AED=0.14;_eAED=0.14;_QI=172|1|1|1|1|1|8|324|290 |
| chr8_3 | exon | 60956873 | 60957152 | 60956873 | ID=Msa1299650-mRNA-1:exon:17884;Parent=Msa1299650-mRNA-1 |
| chr8_3 | exon | 60957275 | 60957343 | 60957275 | ID=Msa1299650-mRNA-1:exon:17885;Parent=Msa1299650-mRNA-1 |
| chr8_3 | exon | 60957432 | 60957518 | 60957432 | ID=Msa1299650-mRNA-1:exon:17886;Parent=Msa1299650-mRNA-1 |
| chr8_3 | exon | 60958526 | 60958632 | 60958526 | ID=Msa1299650-mRNA-1:exon:17887;Parent=Msa1299650-mRNA-1 |
| chr8_3 | exon | 60958871 | 60959004 | 60958871 | ID=Msa1299650-mRNA-1:exon:17888;Parent=Msa1299650-mRNA-1 |
| chr8_3 | exon | 60959143 | 60959219 | 60959143 | ID=Msa1299650-mRNA-1:exon:17889;Parent=Msa1299650-mRNA-1 |
| chr8_3 | exon | 60959568 | 60959681 | 60959568 | ID=Msa1299650-mRNA-1:exon:17890;Parent=Msa1299650-mRNA-1 |
| chr8_3 | exon | 60960576 | 60961076 | 60960576 | ID=Msa1299650-mRNA-1:exon:17891;Parent=Msa1299650-mRNA-1 |
| chr8_3 | five_prime_UTR | 60956873 | 60957044 | 60956873 | ID=Msa1299650-mRNA-1:five_prime_utr;Parent=Msa1299650-mRNA-1 |
| chr8_3 | CDS | 60957045 | 60957152 | 60957045 | ID=Msa1299650-mRNA-1:cds;Parent=Msa1299650-mRNA-1 |
| chr8_3 | CDS | 60957275 | 60957343 | 60957275 | ID=Msa1299650-mRNA-1:cds;Parent=Msa1299650-mRNA-1 |
| chr8_3 | CDS | 60957432 | 60957518 | 60957432 | ID=Msa1299650-mRNA-1:cds;Parent=Msa1299650-mRNA-1 |
| chr8_3 | CDS | 60958526 | 60958632 | 60958526 | ID=Msa1299650-mRNA-1:cds;Parent=Msa1299650-mRNA-1 |
| chr8_3 | CDS | 60958871 | 60959004 | 60958871 | ID=Msa1299650-mRNA-1:cds;Parent=Msa1299650-mRNA-1 |
| chr8_3 | CDS | 60959143 | 60959219 | 60959143 | ID=Msa1299650-mRNA-1:cds;Parent=Msa1299650-mRNA-1 |
| chr8_3 | CDS | 60959568 | 60959681 | 60959568 | ID=Msa1299650-mRNA-1:cds;Parent=Msa1299650-mRNA-1 |
| chr8_3 | CDS | 60960576 | 60960752 | 60960576 | ID=Msa1299650-mRNA-1:cds;Parent=Msa1299650-mRNA-1 |
| chr8_3 | three_prime_UTR | 60960753 | 60961076 | 60960753 | ID=Msa1299650-mRNA-1:three_prime_utr;Parent=Msa1299650-mRNA-1 |
| Gene Sequence |
| Protein sequence |
