AlfalfaGEDB | Msa1429930

M. sativa cultivar zhongmu-4 / Msa1429930

KEGG: K07874
GO: GO:0000139 GO:0003674 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005794 GO:0005802 GO:0005886 GO:0006810 GO:0006888 GO:0008092 GO:0008150 GO:0012505 GO:0016020 GO:0016192 GO:0017022 GO:0030742 GO:0031090 GO:0031984 GO:0032029 GO:0032036 GO:0032588 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044431 GO:0044444 GO:0044446 GO:0044464 GO:0046907 GO:0048193 GO:0051179 GO:0051234 GO:0051641 GO:0051649 GO:0071944 GO:0080115 GO:0098588 GO:0098791
PFAM: PF00071.25

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa1429930	XP_003592896.1	94.608	204	10	1	1	204	1	203	1.58e-140	400

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa1429930	sp\|Q9SEH3\|RAD2C_ARATH	75.124	201	48	1	3	203	2	200	3.31e-113	324

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa1429930	Q1SL04	94.608	204	10	1	1	204	1	203	7.55e-141	400

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
Msa0030170	Msa1429930	0.833397	5.461549e-56	-8.615850e-47
Msa0032920	Msa1429930	-0.816918	4.316318e-52	-8.615850e-47
Msa0032960	Msa1429930	-0.814244	1.700517e-51	-8.615850e-47
Msa1374120	Msa1429930	0.807348	5.280577e-50	-8.615850e-47
Msa1413690	Msa1429930	0.800031	1.743993e-48	-8.615850e-47
Msa1418090	Msa1429930	0.808567	2.906933e-50	-8.615850e-47
Msa1422580	Msa1429930	0.800473	1.417702e-48	-8.615850e-47
Msa1429930	Msa1440960	0.810052	1.395843e-50	-8.615850e-47
Msa0608320	Msa1429930	0.828322	9.587648e-55	-8.615850e-47
Msa0626450	Msa1429930	0.821745	3.428539e-53	-8.615850e-47
Msa0626490	Msa1429930	0.823951	1.050634e-53	-8.615850e-47
Msa0664600	Msa1429930	0.817569	3.081050e-52	-8.615850e-47
Msa0669520	Msa1429930	0.836088	1.148512e-56	-8.615850e-47
Msa0710800	Msa1429930	0.800022	1.751676e-48	-8.615850e-47
Msa0738040	Msa1429930	0.800318	1.524518e-48	-8.615850e-47
Msa0749230	Msa1429930	0.804593	2.005058e-49	-8.615850e-47
Msa0770720	Msa1429930	0.817016	4.102339e-52	-8.615850e-47
Msa0790490	Msa1429930	0.809233	2.094217e-50	-8.615850e-47
Msa0125660	Msa1429930	0.843341	1.487101e-58	-8.615850e-47
Msa0134180	Msa1429930	0.801642	8.176411e-49	-8.615850e-47
Msa0188780	Msa1429930	0.989640	5.372453e-179	-8.615850e-47
Msa0211150	Msa1429930	0.801547	8.551002e-49	-8.615850e-47
Msa0231200	Msa1429930	0.804064	2.584685e-49	-8.615850e-47
Msa1271990	Msa1429930	0.801786	7.637839e-49	-8.615850e-47
Msa0386850	Msa1429930	0.817060	4.010673e-52	-8.615850e-47
Msa0469030	Msa1429930	0.819689	1.017752e-52	-8.615850e-47
Msa0980140	Msa1429930	0.833939	3.996844e-56	-8.615850e-47
Msa1020670	Msa1429930	0.858614	7.299119e-63	-8.615850e-47
Msa1051830	Msa1429930	0.834475	2.934124e-56	-8.615850e-47
Msa1096970	Msa1429930	0.831243	1.863768e-55	-8.615850e-47
Msa0255090	Msa1429930	0.802671	5.022813e-49	-8.615850e-47
Msa0259380	Msa1429930	0.804564	2.033710e-49	-8.615850e-47
Msa0270120	Msa1429930	0.868888	4.670715e-66	-8.615850e-47
Msa0275080	Msa1429930	0.831840	1.328916e-55	-8.615850e-47
Msa0292330	Msa1429930	0.807570	4.738685e-50	-8.615850e-47
Msa0292400	Msa1429930	0.817649	2.955782e-52	-8.615850e-47
Msa0315980	Msa1429930	0.835244	1.878044e-56	-8.615850e-47
Msa0323270	Msa1429930	0.805379	1.373680e-49	-8.615850e-47
Msa0336010	Msa1429930	0.820622	6.223853e-53	-8.615850e-47
Msa1124110	Msa1429930	0.826780	2.248249e-54	-8.615850e-47
Msa1168950	Msa1429930	0.808951	2.405955e-50	-8.615850e-47
Msa1181850	Msa1429930	0.809360	1.966723e-50	-8.615850e-47
Msa1181860	Msa1429930	0.811773	5.920327e-51	-8.615850e-47
Msa1216360	Msa1429930	0.804265	2.347464e-49	-8.615850e-47
Msa0559870	Msa1429930	0.816268	6.036173e-52	-8.615850e-47
Msa0845440	Msa1429930	0.815933	7.169379e-52	-8.615850e-47
Msa0925440	Msa1429930	0.815885	7.350121e-52	-8.615850e-47
Msa0943440	Msa1429930	0.819664	1.031137e-52	-8.615850e-47

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa1429930	MtrunA17_Chr2g0276931	94.608	204	10	1	1	204	1	203	1.45e-144	400
Msa1429930	MtrunA17_Chr4g0055651	74.627	201	49	1	3	203	2	200	1.61e-113	322
Msa1429930	MtrunA17_Chr7g0250531	75.124	201	48	1	3	203	2	200	6.46e-113	320
Msa1429930	MtrunA17_Chr8g0335471	73.632	201	52	1	3	203	2	201	8.68e-110	312
Msa1429930	MtrunA17_Chr4g0030911	54.854	206	85	4	5	204	11	214	2.71e-77	231
Msa1429930	MtrunA17_Chr1g0182321	52.074	217	81	3	2	204	8	215	3.02e-77	231
Msa1429930	MtrunA17_Chr1g0182301	51.613	217	82	3	2	204	8	215	1.31e-76	229
Msa1429930	MtrunA17_Chr1g0212521	53.398	206	89	3	5	204	11	215	1.81e-76	228
Msa1429930	MtrunA17_Chr7g0263071	53.589	209	84	4	5	204	11	215	7.42e-76	227
Msa1429930	MtrunA17_Chr2g0327911	46.890	209	102	4	2	204	8	213	6.04e-64	197
Msa1429930	MtrunA17_Chr3g0112681	44.976	209	107	2	3	203	6	214	3.71e-60	187
Msa1429930	MtrunA17_Chr4g0032201	45.192	208	107	2	3	203	6	213	5.57e-60	187
Msa1429930	MtrunA17_Chr2g0276941	45.755	212	106	3	1	203	7	218	7.09e-60	186
Msa1429930	MtrunA17_Chr3g0123821	42.723	213	111	3	2	203	9	221	1.09e-57	181
Msa1429930	MtrunA17_Chr8g0384311	47.549	204	102	5	3	203	7	208	1.32e-57	180
Msa1429930	MtrunA17_Chr2g0290891	49.112	169	86	0	6	174	3	171	1.80e-57	180
Msa1429930	MtrunA17_Chr7g0234201	44.828	203	105	3	8	203	12	214	2.79e-57	180
Msa1429930	MtrunA17_Chr2g0315551	42.857	210	112	1	2	203	6	215	3.41e-57	179
Msa1429930	MtrunA17_Chr6g0458081	49.697	165	83	0	6	170	3	167	3.89e-57	179
Msa1429930	MtrunA17_Chr8g0381841	43.192	213	110	3	2	203	10	222	5.12e-57	179
Msa1429930	MtrunA17_Chr1g0174281	42.791	215	110	2	3	204	9	223	3.57e-55	175
Msa1429930	MtrunA17_Chr1g0189361	51.205	166	81	0	7	172	12	177	4.58e-55	174
Msa1429930	MtrunA17_Chr2g0325091	45.192	208	107	3	3	203	5	212	5.39e-55	174
Msa1429930	MtrunA17_Chr1g0159481	54.762	168	73	3	5	170	13	179	6.14e-55	174
Msa1429930	MtrunA17_Chr7g0231131	43.878	196	108	1	3	196	9	204	1.44e-54	173
Msa1429930	MtrunA17_Chr2g0283131	42.857	210	112	2	2	203	6	215	3.48e-54	172
Msa1429930	MtrunA17_Chr4g0040781	49.112	169	86	0	2	170	6	174	1.19e-53	171
Msa1429930	MtrunA17_Chr6g0482721	48.810	168	86	0	3	170	6	173	1.20e-53	171
Msa1429930	MtrunA17_Chr4g0046261	48.521	169	87	0	2	170	6	174	1.83e-53	170
Msa1429930	MtrunA17_Chr2g0319951	47.929	169	88	0	2	170	6	174	4.00e-53	169
Msa1429930	MtrunA17_Chr8g0346421	45.989	187	94	1	7	193	24	203	5.44e-53	169
Msa1429930	MtrunA17_Chr8g0349711	48.466	163	84	0	8	170	5	167	1.69e-52	167
Msa1429930	MtrunA17_Chr8g0392931	50.595	168	83	0	3	170	8	175	5.73e-52	166
Msa1429930	MtrunA17_Chr7g0214241	47.904	167	87	0	8	174	14	180	1.23e-51	166
Msa1429930	MtrunA17_Chr7g0265001	44.776	201	108	3	6	203	13	213	2.06e-51	165
Msa1429930	MtrunA17_Chr7g0275991	43.158	190	108	0	7	196	18	207	2.46e-51	165
Msa1429930	MtrunA17_Chr1g0180291	45.274	201	106	4	6	203	11	210	1.83e-50	162
Msa1429930	MtrunA17_Chr8g0349681	47.929	169	88	0	6	174	381	549	7.76e-50	170
Msa1429930	MtrunA17_Chr8g0349681	44.643	168	93	0	3	170	169	336	7.88e-46	159
Msa1429930	MtrunA17_Chr8g0349681	45.625	160	87	0	8	167	12	171	3.77e-44	154
Msa1429930	MtrunA17_Chr3g0130271	44.828	203	106	6	5	203	8	208	1.62e-49	160
Msa1429930	MtrunA17_Chr8g0351861	39.906	213	112	1	7	203	14	226	3.50e-48	157
Msa1429930	MtrunA17_Chr1g0197331	43.689	206	112	4	1	203	7	211	3.11e-47	154
Msa1429930	MtrunA17_Chr4g0055081	42.690	171	97	1	10	180	10	179	4.11e-44	146
Msa1429930	MtrunA17_Chr5g0400131	43.478	161	91	0	10	170	10	170	4.18e-44	146
Msa1429930	MtrunA17_Chr8g0382221	42.857	161	92	0	10	170	10	170	1.67e-43	144
Msa1429930	MtrunA17_Chr3g0123971	42.857	161	92	0	10	170	10	170	1.68e-42	142
Msa1429930	MtrunA17_Chr5g0433561	36.559	186	108	1	11	186	12	197	2.24e-40	136
Msa1429930	MtrunA17_Chr4g0034871	41.071	168	92	3	9	169	8	175	4.56e-40	135
Msa1429930	MtrunA17_Chr3g0109721	38.596	171	105	0	11	181	12	182	5.56e-40	135
Msa1429930	MtrunA17_Chr8g0390561	35.294	204	126	2	1	204	1	198	1.38e-39	134
Msa1429930	MtrunA17_Chr1g0199331	38.509	161	98	1	11	170	33	193	5.34e-38	130
Msa1429930	MtrunA17_Chr2g0331691	38.043	184	104	4	2	178	3	183	5.93e-37	127
Msa1429930	MtrunA17_Chr4g0004661	39.548	177	97	4	9	178	64	237	1.88e-36	128
Msa1429930	MtrunA17_Chr6g0466301	36.364	198	105	5	9	198	8	192	1.01e-35	124
Msa1429930	MtrunA17_Chr6g0465491	36.364	198	105	5	9	198	8	192	1.01e-35	124
Msa1429930	MtrunA17_Chr1g0201121	36.747	166	98	3	9	167	8	173	4.70e-34	120
Msa1429930	MtrunA17_Chr8g0383261	36.747	166	98	3	9	167	12	177	2.58e-31	113
Msa1429930	MtrunA17_Chr6g0465471	36.913	149	87	4	26	167	7	155	2.08e-24	95.5
Msa1429930	MtrunA17_Chr6g0466161	36.913	149	87	4	26	167	7	155	2.34e-24	95.5
Msa1429930	MtrunA17_Chr8g0371501	31.609	174	91	6	9	163	6	170	5.20e-21	86.3
Msa1429930	MtrunA17_Chr4g0037021	30.286	175	105	7	1	163	1	170	3.28e-20	84.3
Msa1429930	MtrunA17_Chr3g0138111	29.891	184	122	5	10	191	14	192	5.96e-20	84.0
Msa1429930	MtrunA17_Chr3g0138121	29.891	184	122	5	10	191	14	192	6.35e-20	84.0
Msa1429930	MtrunA17_Chr3g0138101	29.891	184	122	5	10	191	14	192	6.69e-20	84.0
Msa1429930	MtrunA17_Chr2g0325101	31.138	167	101	6	9	163	6	170	7.53e-20	83.2
Msa1429930	MtrunA17_Chr6g0486041	30.114	176	95	5	9	165	6	172	7.56e-20	83.6
Msa1429930	MtrunA17_Chr4g0046211	32.353	136	82	4	9	143	6	132	1.06e-19	81.6
Msa1429930	MtrunA17_Chr5g0405791	30.539	167	102	5	9	163	6	170	1.11e-19	82.8
Msa1429930	MtrunA17_Chr3g0117931	30.539	167	102	5	9	163	8	172	2.43e-19	82.0
Msa1429930	MtrunA17_Chr6g0466431	35.354	99	55	1	9	107	8	97	4.78e-18	75.9
Msa1429930	MtrunA17_Chr6g0465611	35.354	99	55	1	9	107	8	97	4.78e-18	75.9
Msa1429930	MtrunA17_Chr1g0178291	33.526	173	105	4	6	178	428	590	2.32e-17	79.7
Msa1429930	MtrunA17_Chr5g0434561	30.769	156	98	5	10	160	20	170	2.60e-13	65.5
Msa1429930	MtrunA17_Chr2g0331841	34.146	82	53	1	78	159	2	82	4.34e-12	60.1
Msa1429930	MtrunA17_Chr5g0443631	23.977	171	118	3	10	172	105	271	1.16e-11	62.4
Msa1429930	MtrunA17_Chr5g0401071	28.402	169	111	5	10	173	20	183	1.26e-11	60.8

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa1429930	AT4G17530.1	75.124	201	48	1	3	203	2	200	3.37e-114	324
Msa1429930	AT3G11730.1	75.862	203	48	1	3	204	2	204	4.41e-114	324
Msa1429930	AT5G47200.1	74.627	201	49	1	3	203	2	200	3.01e-112	319
Msa1429930	AT1G02130.1	73.134	201	53	1	3	203	2	201	1.37e-110	315
Msa1429930	AT5G59840.1	53.398	206	89	3	5	204	11	215	3.47e-76	228
Msa1429930	AT3G46060.2	53.398	206	89	3	5	204	11	215	3.75e-76	228
Msa1429930	AT3G46060.3	53.398	206	89	3	5	204	11	215	3.75e-76	228
Msa1429930	AT3G46060.1	53.398	206	89	3	5	204	11	215	3.75e-76	228
Msa1429930	AT3G53610.2	52.404	208	88	4	5	204	11	215	5.56e-75	225
Msa1429930	AT3G53610.3	52.404	208	88	4	5	204	11	215	5.56e-75	225
Msa1429930	AT3G53610.1	52.404	208	88	4	5	204	11	215	5.56e-75	225
Msa1429930	AT3G09900.1	56.701	194	80	2	2	194	8	198	1.16e-72	219
Msa1429930	AT5G03520.1	52.632	209	89	3	2	203	8	213	1.98e-72	219
Msa1429930	AT1G09630.1	46.392	194	104	0	3	196	6	199	4.35e-60	187
Msa1429930	AT4G35860.1	43.721	215	99	2	6	204	3	211	6.36e-60	187
Msa1429930	AT1G06400.1	44.498	209	109	2	2	203	6	214	7.75e-60	187
Msa1429930	AT3G07410.1	51.190	168	82	0	7	174	10	177	7.45e-59	184
Msa1429930	AT4G17170.1	44.762	210	104	3	6	204	3	211	1.96e-58	183
Msa1429930	AT1G07410.1	43.478	207	111	2	3	203	6	212	3.67e-58	182
Msa1429930	AT3G46830.1	45.729	199	108	0	3	201	6	204	8.11e-57	179
Msa1429930	AT3G46830.2	45.729	199	108	0	3	201	6	204	8.11e-57	179
Msa1429930	AT5G47960.1	43.981	216	104	3	3	204	9	221	1.01e-56	179
Msa1429930	AT4G17160.1	43.128	211	100	3	6	204	3	205	3.17e-56	177
Msa1429930	AT5G59150.1	46.154	195	105	0	5	199	8	202	3.49e-56	177
Msa1429930	AT4G18800.1	44.231	208	109	2	2	203	6	212	5.54e-56	177
Msa1429930	AT4G39990.1	43.689	206	107	2	7	203	15	220	8.73e-56	177
Msa1429930	AT2G43130.1	42.157	204	110	2	7	203	10	212	1.41e-55	176
Msa1429930	AT4G18430.1	48.066	181	94	0	2	182	6	186	1.46e-55	176
Msa1429930	AT5G45750.1	46.154	195	104	1	2	196	6	199	1.57e-55	176
Msa1429930	AT3G12160.1	42.925	212	111	2	3	204	9	220	1.67e-55	176
Msa1429930	AT5G65270.1	42.105	209	109	2	7	203	15	223	3.34e-55	175
Msa1429930	AT1G05810.1	48.214	168	87	0	7	174	10	177	3.97e-55	175
Msa1429930	AT5G60860.1	50.296	169	84	0	2	170	6	174	5.34e-55	174
Msa1429930	AT1G16920.1	49.701	167	84	0	4	170	8	174	9.43e-55	174
Msa1429930	AT1G05810.2	48.214	168	87	0	7	174	56	223	1.25e-54	175
Msa1429930	AT2G31680.1	50.318	157	78	0	7	163	10	166	4.78e-54	172
Msa1429930	AT1G73640.1	47.368	190	99	1	5	193	9	198	5.41e-54	172
Msa1429930	AT5G47520.1	50.602	166	82	0	7	172	12	177	7.50e-54	172
Msa1429930	AT3G15060.1	48.521	169	87	0	2	170	6	174	3.43e-53	170
Msa1429930	AT5G03520.2	49.701	167	74	3	44	203	40	203	5.57e-53	169
Msa1429930	AT1G28550.1	41.038	212	114	3	2	203	6	216	6.79e-53	169
Msa1429930	AT1G18200.1	50.000	168	84	0	3	170	7	174	6.87e-53	169
Msa1429930	AT1G43890.3	52.976	168	76	3	5	170	9	175	2.86e-52	167
Msa1429930	AT1G43890.1	52.976	168	76	3	5	170	9	175	2.86e-52	167
Msa1429930	AT1G43890.2	52.976	168	76	3	5	170	9	175	2.86e-52	167
Msa1429930	AT2G33870.1	46.524	187	93	2	2	181	6	192	2.94e-52	167
Msa1429930	AT5G03530.2	52.695	167	76	3	6	170	10	175	3.25e-50	162
Msa1429930	AT5G03530.1	52.695	167	76	3	6	170	10	175	3.25e-50	162
Msa1429930	AT1G01200.1	43.455	191	107	1	7	196	26	216	3.07e-48	158
Msa1429930	AT2G44610.1	43.103	174	96	1	10	183	10	180	8.27e-45	148
Msa1429930	AT4G39890.1	42.593	162	92	1	10	170	10	171	4.54e-42	141
Msa1429930	AT3G09910.5	48.538	171	85	3	6	174	10	179	7.72e-42	140
Msa1429930	AT3G09910.4	48.538	171	85	3	6	174	10	179	7.72e-42	140
Msa1429930	AT3G09910.3	44.500	200	103	4	6	203	10	203	1.30e-41	140
Msa1429930	AT3G09910.1	44.500	200	103	4	6	203	10	203	1.30e-41	140
Msa1429930	AT3G09910.2	44.500	200	103	4	6	203	10	203	1.30e-41	140
Msa1429930	AT5G10260.1	42.236	161	93	0	10	170	10	170	2.70e-41	139
Msa1429930	AT2G22290.1	40.994	161	95	0	10	170	10	170	8.86e-41	138
Msa1429930	AT4G19640.1	39.766	171	103	0	11	181	12	182	5.55e-40	135
Msa1429930	AT4G35860.2	40.000	170	80	2	51	204	2	165	2.17e-39	133
Msa1429930	AT5G45130.1	38.596	171	105	0	11	181	12	182	4.52e-39	133
Msa1429930	AT3G54840.1	41.558	154	89	1	11	163	35	188	7.69e-39	132
Msa1429930	AT3G54840.2	41.558	154	89	1	11	163	35	188	1.21e-38	132
Msa1429930	AT5G59150.2	50.000	120	60	0	51	170	3	122	1.52e-38	130
Msa1429930	AT3G54840.3	41.176	153	89	1	12	163	2	154	2.21e-38	130
Msa1429930	AT3G18820.1	40.476	168	93	3	9	169	8	175	1.50e-37	129
Msa1429930	AT5G45130.2	37.870	169	105	0	13	181	22	190	2.99e-37	129
Msa1429930	AT5G64990.1	34.328	201	120	3	10	202	8	204	4.47e-36	125
Msa1429930	AT1G52280.1	38.983	177	98	4	9	178	8	181	4.57e-36	125
Msa1429930	AT3G16100.1	38.983	177	98	4	9	178	8	181	5.67e-36	125
Msa1429930	AT4G09720.1	40.719	167	90	3	9	167	8	173	7.10e-36	125
Msa1429930	AT1G49300.2	39.394	165	93	3	9	166	8	172	6.74e-35	122
Msa1429930	AT1G49300.1	39.394	165	93	3	9	166	8	172	6.74e-35	122
Msa1429930	AT2G21880.1	36.747	166	98	3	9	167	9	174	2.15e-34	121
Msa1429930	AT4G09720.4	38.372	172	92	3	9	167	8	178	1.23e-33	119
Msa1429930	AT1G22740.1	34.946	186	109	4	9	182	8	193	2.31e-33	119
Msa1429930	AT5G64990.2	33.173	208	120	4	10	202	8	211	2.44e-33	119
Msa1429930	AT4G09720.3	37.079	178	92	3	9	167	8	184	1.03e-32	117
Msa1429930	AT5G39620.1	38.323	167	92	3	10	167	6	170	7.45e-32	115
Msa1429930	AT4G19640.3	41.985	131	76	0	11	141	12	142	1.75e-31	113
Msa1429930	AT4G19640.2	44.828	116	64	0	11	126	12	127	7.07e-31	110
Msa1429930	AT4G09720.6	42.754	138	70	3	38	167	3	139	5.86e-29	106
Msa1429930	AT4G09720.5	42.754	138	70	3	38	167	3	139	5.86e-29	106
Msa1429930	AT4G09720.2	42.754	138	70	3	38	167	3	139	5.86e-29	106
Msa1429930	AT2G21880.4	36.879	141	82	3	34	167	9	149	4.79e-27	102
Msa1429930	AT2G21880.3	36.879	141	82	3	34	167	9	149	4.79e-27	102
Msa1429930	AT2G21880.2	31.928	166	98	4	9	167	9	166	1.36e-24	96.3
Msa1429930	AT2G44690.1	32.335	167	99	5	9	163	18	182	2.52e-22	90.5
Msa1429930	AT5G55080.1	30.864	162	107	4	10	170	14	171	1.31e-21	89.0
Msa1429930	AT4G35020.1	31.034	174	92	6	9	163	6	170	7.82e-21	86.3
Msa1429930	AT4G35020.2	31.034	174	92	6	9	163	6	170	7.82e-21	86.3
Msa1429930	AT4G35020.3	31.034	174	92	6	9	163	6	170	7.82e-21	86.3
Msa1429930	AT3G48040.1	31.138	167	101	5	9	163	8	172	8.78e-21	86.3
Msa1429930	AT3G51300.1	31.515	165	99	5	11	163	8	170	8.87e-21	85.9
Msa1429930	AT1G75840.1	30.539	167	102	5	9	163	6	170	1.72e-20	85.1
Msa1429930	AT5G45970.1	31.138	167	101	6	9	163	6	170	1.72e-20	85.5
Msa1429930	AT4G35950.1	31.609	174	91	6	9	163	6	170	2.62e-20	84.7
Msa1429930	AT2G17800.2	31.138	167	101	5	9	163	6	170	2.94e-20	84.7
Msa1429930	AT2G17800.1	31.138	167	101	5	9	163	6	170	2.94e-20	84.7
Msa1429930	AT4G28950.1	29.940	167	105	5	9	165	6	170	3.94e-20	84.7
Msa1429930	AT1G20090.1	30.460	174	93	6	9	163	5	169	4.25e-20	84.3
Msa1429930	AT5G20010.1	28.502	207	126	7	10	199	14	215	6.27e-20	84.3
Msa1429930	AT5G55190.1	29.891	184	122	5	10	191	14	192	9.53e-20	84.0
Msa1429930	AT5G62880.2	34.959	123	77	3	9	130	8	128	1.89e-19	82.4
Msa1429930	AT3G48040.2	34.146	123	78	3	9	130	8	128	1.90e-19	82.0
Msa1429930	AT5G62880.1	34.959	123	77	3	9	130	8	128	2.98e-19	82.4
Msa1429930	AT5G20020.1	31.288	163	105	5	10	170	14	171	3.62e-19	82.4
Msa1429930	AT5G46025.1	39.450	109	64	2	71	178	6	113	5.56e-19	79.0
Msa1429930	AT4G35020.4	32.812	128	78	4	11	132	8	133	3.60e-17	75.1
Msa1429930	AT4G35020.5	32.812	128	78	4	11	132	8	133	3.60e-17	75.1
Msa1429930	AT5G67560.1	30.189	159	101	5	10	163	20	173	5.58e-13	65.1
Msa1429930	AT3G49870.2	28.994	169	110	5	10	173	1	164	8.05e-13	64.3
Msa1429930	AT5G37680.1	30.769	156	98	5	10	160	20	170	1.46e-12	63.9
Msa1429930	AT3G49870.1	28.994	169	110	5	10	173	20	183	2.16e-12	63.5
Msa1429930	AT3G51290.2	30.496	141	84	5	35	163	633	771	1.69e-11	63.2

Find 56 sgRNAs with CRISPR-Local

Find 156 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
CTGTTTAAACTTCTGATTAT+TGG	0.148817	tig0026573:+54717	Msa1429930:CDS
GTAATTAATAGATGGTATTT+TGG	0.225282	tig0026573:-55779	None:intergenic
CGGCGGGTTGAGTGGAGAAT+TGG	0.325827	tig0026573:+54536	Msa1429930:five_prime_UTR
TCTGTCTCCAAGCTTCTTGT+TGG	0.372249	tig0026573:+55307	Msa1429930:CDS
CGAGCAGGCTTTCTTAACTA+TGG	0.379697	tig0026573:+55444	Msa1429930:CDS
CTTAGTACCAGTTGTTGGTT+GGG	0.381427	tig0026573:-55586	None:intergenic
CTGTCTCCAAGCTTCTTGTT+GGG	0.389925	tig0026573:+55308	Msa1429930:CDS
GAAAGCCTGCTCGACATTGA+TGG	0.390374	tig0026573:-55434	None:intergenic
CCGTGTTGTTATAACATAGA+TGG	0.412701	tig0026573:+55745	Msa1429930:three_prime_UTR
ATCAGAACTGTTGAACTTGA+AGG	0.417340	tig0026573:+55012	Msa1429930:CDS
GCTGACTTAGTACCAGTTGT+TGG	0.422921	tig0026573:-55591	None:intergenic
ACTTAGTACCAGTTGTTGGT+TGG	0.438762	tig0026573:-55587	None:intergenic
TCAGCCTTGTAATTAATAGA+TGG	0.449919	tig0026573:-55787	None:intergenic
CAATAATCAGAAGTTTAAAC+AGG	0.456211	tig0026573:-54716	None:intergenic
AATATGTAAACAGAATATTA+TGG	0.457274	tig0026573:-55879	None:intergenic
GGCGGGTTGAGTGGAGAATT+GGG	0.459236	tig0026573:+54537	Msa1429930:five_prime_UTR
ATTATTGGAGATTCCTCTGT+TGG	0.459509	tig0026573:+54732	Msa1429930:CDS
CAGTTGGTGTTCTGTGGGAT+TGG	0.460139	tig0026573:-55642	None:intergenic
GAGTTACTTGTTCTTAATCT+CGG	0.464801	tig0026573:-55470	None:intergenic
TTTATTCCCAACAAGAAGCT+TGG	0.465262	tig0026573:-55314	None:intergenic
TTTGTTTAGTGGGATACTGC+TGG	0.467245	tig0026573:+55145	Msa1429930:intron
GAACACCAACTGTTGTGGTT+AGG	0.480585	tig0026573:+55653	Msa1429930:CDS
TAGCACTTGTCTCAAGGAAA+GGG	0.481996	tig0026573:-55405	None:intergenic
AGCAGAATCTGTTCAGATCA+AGG	0.484521	tig0026573:+55614	Msa1429930:CDS
ATGGGAACCCAACCAACAAC+TGG	0.487422	tig0026573:+55579	Msa1429930:CDS
CGCAAAAGCCTTGGCAGTGT+GGG	0.491480	tig0026573:-55368	None:intergenic
GGGTTTGAACAAGCTTGTTG+TGG	0.493364	tig0026573:-55348	None:intergenic
AGCATCATTTATTAGTTACA+AGG	0.505939	tig0026573:+55850	Msa1429930:three_prime_UTR
CCACAACAGTTGGTGTTCTG+TGG	0.508955	tig0026573:-55648	None:intergenic
GGTTTGAACAAGCTTGTTGT+GGG	0.511858	tig0026573:-55347	None:intergenic
TGAATTGAATTGAAGACGAA+AGG	0.514755	tig0026573:+54578	Msa1429930:five_prime_UTR
TTAGTGGGATACTGCTGGAC+AGG	0.521218	tig0026573:+55150	Msa1429930:intron
TTAGCACTTGTCTCAAGGAA+AGG	0.522871	tig0026573:-55406	None:intergenic
ATTACTAGCAGTTACTATAG+AGG	0.524007	tig0026573:+55187	Msa1429930:CDS
AGAAAGAGTTGAGAAAGAGA+TGG	0.533717	tig0026573:-55692	None:intergenic
AGACTCCATCAATGTCGAGC+AGG	0.537523	tig0026573:+55429	Msa1429930:CDS
GCAGAATCTGTTCAGATCAA+GGG	0.538023	tig0026573:+55615	Msa1429930:CDS
AAGGTGATCCGCAAAAGCCT+TGG	0.553691	tig0026573:-55377	None:intergenic
CACAACAGTTGGTGTTCTGT+GGG	0.556435	tig0026573:-55647	None:intergenic
GTATTAAGCGGCGGGTTGAG+TGG	0.557549	tig0026573:+54528	Msa1429930:five_prime_UTR
AATACCATCTATTAATTACA+AGG	0.562313	tig0026573:+55783	Msa1429930:three_prime_UTR
TGTTCAAACCCACACTGCCA+AGG	0.568100	tig0026573:+55360	Msa1429930:CDS
AGTCTTTAGCACTTGTCTCA+AGG	0.571585	tig0026573:-55411	None:intergenic
ATAACTGACAATCTGCAGCT+TGG	0.586218	tig0026573:-55043	None:intergenic
GACACCTACATTAGTACCAT+CGG	0.591697	tig0026573:+54890	Msa1429930:CDS
CCACAGAACACCAACTGTTG+TGG	0.596694	tig0026573:+55648	Msa1429930:CDS
CCGCAAAAGCCTTGGCAGTG+TGG	0.598076	tig0026573:-55369	None:intergenic
TCTCAAGGAAAGGGATAGCA+AGG	0.608190	tig0026573:-55396	None:intergenic
TAAGCACAAACAACAACTGA+AGG	0.608885	tig0026573:+55905	Msa1429930:three_prime_UTR
AACGCCGATGGTACTAATGT+AGG	0.610763	tig0026573:-54894	None:intergenic
CAGAATCTGTTCAGATCAAG+GGG	0.610829	tig0026573:+55616	Msa1429930:CDS
TTGAACCTAACCACAACAGT+TGG	0.624666	tig0026573:-55658	None:intergenic
GTTTCAACAATGTTAAACAG+TGG	0.630726	tig0026573:+55254	Msa1429930:CDS
CCATCTATGTTATAACAACA+CGG	0.642095	tig0026573:-55745	None:intergenic
AATTACGAAATCAACGCCGA+TGG	0.659249	tig0026573:-54906	None:intergenic
AGTTACTATAGAGGAGCACA+TGG	0.682181	tig0026573:+55196	Msa1429930:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	TTTAAAAAAAAAAAAAAAAA+AGG	+	tig0026573:54435-54454	Msa1429930:intron	0.0%
!!	TTTAAAAAAAAAAAAAAAAA+AGG	+	tig0026573:54435-54454	Msa1429930:intron	0.0%
!!	AATATGTAAACAGAATATTA+TGG	-	tig0026573:55882-55901	None:intergenic	15.0%
!!	AATATGTAAACAGAATATTA+TGG	-	tig0026573:55882-55901	None:intergenic	15.0%
!!	AAGAAAAAGAAAGAAGAAAA+GGG	-	tig0026573:54849-54868	None:intergenic	20.0%
!!	AAAGAAAAAGAAAGAAGAAA+AGG	-	tig0026573:54850-54869	None:intergenic	20.0%
!!	TGTATATTGAAATTCAATCA+AGG	-	tig0026573:55554-55573	None:intergenic	20.0%
!!	ATTGAATTTCAATATACAAC+AGG	+	tig0026573:55556-55575	Msa1429930:intron	20.0%
!!!	GTAATTAATAGATGGTATTT+TGG	-	tig0026573:55782-55801	None:intergenic	20.0%
!!	AATACCATCTATTAATTACA+AGG	+	tig0026573:55783-55802	Msa1429930:three_prime_UTR	20.0%
!!	AAGAAAAAGAAAGAAGAAAA+GGG	-	tig0026573:54849-54868	None:intergenic	20.0%
!!	AAAGAAAAAGAAAGAAGAAA+AGG	-	tig0026573:54850-54869	None:intergenic	20.0%
!!	TGTATATTGAAATTCAATCA+AGG	-	tig0026573:55554-55573	None:intergenic	20.0%
!!	ATTGAATTTCAATATACAAC+AGG	+	tig0026573:55556-55575	Msa1429930:intron	20.0%
!!!	GTAATTAATAGATGGTATTT+TGG	-	tig0026573:55782-55801	None:intergenic	20.0%
!!	AATACCATCTATTAATTACA+AGG	+	tig0026573:55783-55802	Msa1429930:three_prime_UTR	20.0%
!!!	GTGAAAGAAAAAGTATTAAG+CGG	+	tig0026573:54516-54535	Msa1429930:five_prime_UTR	25.0%
!	CAATAATCAGAAGTTTAAAC+AGG	-	tig0026573:54719-54738	None:intergenic	25.0%
!	CTGTTTAAACTTCTGATTAT+TGG	+	tig0026573:54717-54736	Msa1429930:CDS	25.0%
!!	CTTCTTTCTTTTTCTTTTTC+AGG	+	tig0026573:54853-54872	Msa1429930:intron	25.0%
!!	TCTACTTTACTTTGTTTAGT+GGG	+	tig0026573:55135-55154	Msa1429930:intron	25.0%
!	AATTTCAATATACAACAGGA+TGG	+	tig0026573:55560-55579	Msa1429930:intron	25.0%
!	ATTTCAATATACAACAGGAT+GGG	+	tig0026573:55561-55580	Msa1429930:intron	25.0%
!!!	TATTCGCGTCATTTTTATTT+CGG	+	tig0026573:55812-55831	Msa1429930:three_prime_UTR	25.0%
!	AGCATCATTTATTAGTTACA+AGG	+	tig0026573:55850-55869	Msa1429930:three_prime_UTR	25.0%
!!!	GTGAAAGAAAAAGTATTAAG+CGG	+	tig0026573:54516-54535	Msa1429930:five_prime_UTR	25.0%
!	CAATAATCAGAAGTTTAAAC+AGG	-	tig0026573:54719-54738	None:intergenic	25.0%
!	CTGTTTAAACTTCTGATTAT+TGG	+	tig0026573:54717-54736	Msa1429930:CDS	25.0%
!!	CTTCTTTCTTTTTCTTTTTC+AGG	+	tig0026573:54853-54872	Msa1429930:intron	25.0%
!!	TCTACTTTACTTTGTTTAGT+GGG	+	tig0026573:55135-55154	Msa1429930:intron	25.0%
!	AATTTCAATATACAACAGGA+TGG	+	tig0026573:55560-55579	Msa1429930:intron	25.0%
!	ATTTCAATATACAACAGGAT+GGG	+	tig0026573:55561-55580	Msa1429930:intron	25.0%
!!!	TATTCGCGTCATTTTTATTT+CGG	+	tig0026573:55812-55831	Msa1429930:three_prime_UTR	25.0%
!	AGCATCATTTATTAGTTACA+AGG	+	tig0026573:55850-55869	Msa1429930:three_prime_UTR	25.0%
!!	AAAGAAAAAGTATTAAGCGG+CGG	+	tig0026573:54519-54538	Msa1429930:five_prime_UTR	30.0%
	TGAATTGAATTGAAGACGAA+AGG	+	tig0026573:54578-54597	Msa1429930:five_prime_UTR	30.0%
!!	CAACGAATAGTAAGTTTTGT+TGG	+	tig0026573:54622-54641	Msa1429930:intron	30.0%
!!!	GAAAAGGGTTTTGTTTTGTT+TGG	-	tig0026573:54834-54853	None:intergenic	30.0%
!!!	ACTACTCATTGCTATTTTGA+TGG	+	tig0026573:54979-54998	Msa1429930:intron	30.0%
	GATTGTCAGTTATCTTTCTT+CGG	+	tig0026573:55053-55072	Msa1429930:intron	30.0%
!	CTCTACTTTACTTTGTTTAG+TGG	+	tig0026573:55134-55153	Msa1429930:intron	30.0%
	ATTACTAGCAGTTACTATAG+AGG	+	tig0026573:55187-55206	Msa1429930:CDS	30.0%
	GTTTCAACAATGTTAAACAG+TGG	+	tig0026573:55254-55273	Msa1429930:CDS	30.0%
	GAGTTACTTGTTCTTAATCT+CGG	-	tig0026573:55473-55492	None:intergenic	30.0%
	AATTCAATCAAGGTCCAATA+AGG	-	tig0026573:55544-55563	None:intergenic	30.0%
	CCATCTATGTTATAACAACA+CGG	-	tig0026573:55748-55767	None:intergenic	30.0%
!	TCAGCCTTGTAATTAATAGA+TGG	-	tig0026573:55790-55809	None:intergenic	30.0%
!!	AAAGAAAAAGTATTAAGCGG+CGG	+	tig0026573:54519-54538	Msa1429930:five_prime_UTR	30.0%
	TGAATTGAATTGAAGACGAA+AGG	+	tig0026573:54578-54597	Msa1429930:five_prime_UTR	30.0%
!!	CAACGAATAGTAAGTTTTGT+TGG	+	tig0026573:54622-54641	Msa1429930:intron	30.0%
!!!	GAAAAGGGTTTTGTTTTGTT+TGG	-	tig0026573:54834-54853	None:intergenic	30.0%
!!!	ACTACTCATTGCTATTTTGA+TGG	+	tig0026573:54979-54998	Msa1429930:intron	30.0%
	GATTGTCAGTTATCTTTCTT+CGG	+	tig0026573:55053-55072	Msa1429930:intron	30.0%
!	CTCTACTTTACTTTGTTTAG+TGG	+	tig0026573:55134-55153	Msa1429930:intron	30.0%
	ATTACTAGCAGTTACTATAG+AGG	+	tig0026573:55187-55206	Msa1429930:CDS	30.0%
	GTTTCAACAATGTTAAACAG+TGG	+	tig0026573:55254-55273	Msa1429930:CDS	30.0%
	GAGTTACTTGTTCTTAATCT+CGG	-	tig0026573:55473-55492	None:intergenic	30.0%
	AATTCAATCAAGGTCCAATA+AGG	-	tig0026573:55544-55563	None:intergenic	30.0%
	CCATCTATGTTATAACAACA+CGG	-	tig0026573:55748-55767	None:intergenic	30.0%
!	TCAGCCTTGTAATTAATAGA+TGG	-	tig0026573:55790-55809	None:intergenic	30.0%
!!	AAGAAAAAGTATTAAGCGGC+GGG	+	tig0026573:54520-54539	Msa1429930:five_prime_UTR	35.0%
	ATTATTGGAGATTCCTCTGT+TGG	+	tig0026573:54732-54751	Msa1429930:CDS	35.0%
	ATCAGAACTGTTGAACTTGA+AGG	+	tig0026573:55012-55031	Msa1429930:CDS	35.0%
	TTTATTCCCAACAAGAAGCT+TGG	-	tig0026573:55317-55336	None:intergenic	35.0%
	AGAAAGAGTTGAGAAAGAGA+TGG	-	tig0026573:55695-55714	None:intergenic	35.0%
!	CCGTGTTGTTATAACATAGA+TGG	+	tig0026573:55745-55764	Msa1429930:three_prime_UTR	35.0%
	TAAGCACAAACAACAACTGA+AGG	+	tig0026573:55905-55924	Msa1429930:three_prime_UTR	35.0%
!!	AAGAAAAAGTATTAAGCGGC+GGG	+	tig0026573:54520-54539	Msa1429930:five_prime_UTR	35.0%
	ATTATTGGAGATTCCTCTGT+TGG	+	tig0026573:54732-54751	Msa1429930:CDS	35.0%
	ATCAGAACTGTTGAACTTGA+AGG	+	tig0026573:55012-55031	Msa1429930:CDS	35.0%
	TTTATTCCCAACAAGAAGCT+TGG	-	tig0026573:55317-55336	None:intergenic	35.0%
	AGAAAGAGTTGAGAAAGAGA+TGG	-	tig0026573:55695-55714	None:intergenic	35.0%
!	CCGTGTTGTTATAACATAGA+TGG	+	tig0026573:55745-55764	Msa1429930:three_prime_UTR	35.0%
	TAAGCACAAACAACAACTGA+AGG	+	tig0026573:55905-55924	Msa1429930:three_prime_UTR	35.0%
!	CAAGCAAGATTTTCCAACAG+AGG	-	tig0026573:54748-54767	None:intergenic	40.0%
	GACACCTACATTAGTACCAT+CGG	+	tig0026573:54890-54909	Msa1429930:CDS	40.0%
	AATTACGAAATCAACGCCGA+TGG	-	tig0026573:54909-54928	None:intergenic	40.0%
	ATAACTGACAATCTGCAGCT+TGG	-	tig0026573:55046-55065	None:intergenic	40.0%
	TTTGTTTAGTGGGATACTGC+TGG	+	tig0026573:55145-55164	Msa1429930:intron	40.0%
!	AGTTACTATAGAGGAGCACA+TGG	+	tig0026573:55196-55215	Msa1429930:CDS	40.0%
!!	GGTTTGAACAAGCTTGTTGT+GGG	-	tig0026573:55350-55369	None:intergenic	40.0%
	TAGCACTTGTCTCAAGGAAA+GGG	-	tig0026573:55408-55427	None:intergenic	40.0%
	TTAGCACTTGTCTCAAGGAA+AGG	-	tig0026573:55409-55428	None:intergenic	40.0%
	AGTCTTTAGCACTTGTCTCA+AGG	-	tig0026573:55414-55433	None:intergenic	40.0%
	TCTCTCTCACTCAACCTTAT+TGG	+	tig0026573:55527-55546	Msa1429930:intron	40.0%
!	CTTAGTACCAGTTGTTGGTT+GGG	-	tig0026573:55589-55608	None:intergenic	40.0%
	ACTTAGTACCAGTTGTTGGT+TGG	-	tig0026573:55590-55609	None:intergenic	40.0%
	AGCAGAATCTGTTCAGATCA+AGG	+	tig0026573:55614-55633	Msa1429930:CDS	40.0%
	GCAGAATCTGTTCAGATCAA+GGG	+	tig0026573:55615-55634	Msa1429930:CDS	40.0%
	CAGAATCTGTTCAGATCAAG+GGG	+	tig0026573:55616-55635	Msa1429930:CDS	40.0%
	TTGAACCTAACCACAACAGT+TGG	-	tig0026573:55661-55680	None:intergenic	40.0%
!	CAAGCAAGATTTTCCAACAG+AGG	-	tig0026573:54748-54767	None:intergenic	40.0%
	GACACCTACATTAGTACCAT+CGG	+	tig0026573:54890-54909	Msa1429930:CDS	40.0%
	AATTACGAAATCAACGCCGA+TGG	-	tig0026573:54909-54928	None:intergenic	40.0%
	ATAACTGACAATCTGCAGCT+TGG	-	tig0026573:55046-55065	None:intergenic	40.0%
	TTTGTTTAGTGGGATACTGC+TGG	+	tig0026573:55145-55164	Msa1429930:intron	40.0%
!	AGTTACTATAGAGGAGCACA+TGG	+	tig0026573:55196-55215	Msa1429930:CDS	40.0%
!!	GGTTTGAACAAGCTTGTTGT+GGG	-	tig0026573:55350-55369	None:intergenic	40.0%
	TAGCACTTGTCTCAAGGAAA+GGG	-	tig0026573:55408-55427	None:intergenic	40.0%
	TTAGCACTTGTCTCAAGGAA+AGG	-	tig0026573:55409-55428	None:intergenic	40.0%
	AGTCTTTAGCACTTGTCTCA+AGG	-	tig0026573:55414-55433	None:intergenic	40.0%
	TCTCTCTCACTCAACCTTAT+TGG	+	tig0026573:55527-55546	Msa1429930:intron	40.0%
!	CTTAGTACCAGTTGTTGGTT+GGG	-	tig0026573:55589-55608	None:intergenic	40.0%
	ACTTAGTACCAGTTGTTGGT+TGG	-	tig0026573:55590-55609	None:intergenic	40.0%
	AGCAGAATCTGTTCAGATCA+AGG	+	tig0026573:55614-55633	Msa1429930:CDS	40.0%
	GCAGAATCTGTTCAGATCAA+GGG	+	tig0026573:55615-55634	Msa1429930:CDS	40.0%
	CAGAATCTGTTCAGATCAAG+GGG	+	tig0026573:55616-55635	Msa1429930:CDS	40.0%
	TTGAACCTAACCACAACAGT+TGG	-	tig0026573:55661-55680	None:intergenic	40.0%
	AACGCCGATGGTACTAATGT+AGG	-	tig0026573:54897-54916	None:intergenic	45.0%
	TCTGTCTCCAAGCTTCTTGT+TGG	+	tig0026573:55307-55326	Msa1429930:CDS	45.0%
	CTGTCTCCAAGCTTCTTGTT+GGG	+	tig0026573:55308-55327	Msa1429930:CDS	45.0%
!!	GGGTTTGAACAAGCTTGTTG+TGG	-	tig0026573:55351-55370	None:intergenic	45.0%
	TCTCAAGGAAAGGGATAGCA+AGG	-	tig0026573:55399-55418	None:intergenic	45.0%
	CGAGCAGGCTTTCTTAACTA+TGG	+	tig0026573:55444-55463	Msa1429930:CDS	45.0%
!	GCTGACTTAGTACCAGTTGT+TGG	-	tig0026573:55594-55613	None:intergenic	45.0%
!	CACAACAGTTGGTGTTCTGT+GGG	-	tig0026573:55650-55669	None:intergenic	45.0%
	GAACACCAACTGTTGTGGTT+AGG	+	tig0026573:55653-55672	Msa1429930:CDS	45.0%
	AACGCCGATGGTACTAATGT+AGG	-	tig0026573:54897-54916	None:intergenic	45.0%
	TCTGTCTCCAAGCTTCTTGT+TGG	+	tig0026573:55307-55326	Msa1429930:CDS	45.0%
	CTGTCTCCAAGCTTCTTGTT+GGG	+	tig0026573:55308-55327	Msa1429930:CDS	45.0%
!!	GGGTTTGAACAAGCTTGTTG+TGG	-	tig0026573:55351-55370	None:intergenic	45.0%
	TCTCAAGGAAAGGGATAGCA+AGG	-	tig0026573:55399-55418	None:intergenic	45.0%
	CGAGCAGGCTTTCTTAACTA+TGG	+	tig0026573:55444-55463	Msa1429930:CDS	45.0%
!	GCTGACTTAGTACCAGTTGT+TGG	-	tig0026573:55594-55613	None:intergenic	45.0%
!	CACAACAGTTGGTGTTCTGT+GGG	-	tig0026573:55650-55669	None:intergenic	45.0%
	GAACACCAACTGTTGTGGTT+AGG	+	tig0026573:55653-55672	Msa1429930:CDS	45.0%
	TTAGTGGGATACTGCTGGAC+AGG	+	tig0026573:55150-55169	Msa1429930:intron	50.0%
	TGTTCAAACCCACACTGCCA+AGG	+	tig0026573:55360-55379	Msa1429930:CDS	50.0%
	AAGGTGATCCGCAAAAGCCT+TGG	-	tig0026573:55380-55399	None:intergenic	50.0%
	AGACTCCATCAATGTCGAGC+AGG	+	tig0026573:55429-55448	Msa1429930:CDS	50.0%
	GAAAGCCTGCTCGACATTGA+TGG	-	tig0026573:55437-55456	None:intergenic	50.0%
	ATGGGAACCCAACCAACAAC+TGG	+	tig0026573:55579-55598	Msa1429930:CDS	50.0%
!	CAGTTGGTGTTCTGTGGGAT+TGG	-	tig0026573:55645-55664	None:intergenic	50.0%
!	CCACAACAGTTGGTGTTCTG+TGG	-	tig0026573:55651-55670	None:intergenic	50.0%
	CCACAGAACACCAACTGTTG+TGG	+	tig0026573:55648-55667	Msa1429930:CDS	50.0%
	TTAGTGGGATACTGCTGGAC+AGG	+	tig0026573:55150-55169	Msa1429930:intron	50.0%
	TGTTCAAACCCACACTGCCA+AGG	+	tig0026573:55360-55379	Msa1429930:CDS	50.0%
	AAGGTGATCCGCAAAAGCCT+TGG	-	tig0026573:55380-55399	None:intergenic	50.0%
	AGACTCCATCAATGTCGAGC+AGG	+	tig0026573:55429-55448	Msa1429930:CDS	50.0%
	GAAAGCCTGCTCGACATTGA+TGG	-	tig0026573:55437-55456	None:intergenic	50.0%
	ATGGGAACCCAACCAACAAC+TGG	+	tig0026573:55579-55598	Msa1429930:CDS	50.0%
!	CAGTTGGTGTTCTGTGGGAT+TGG	-	tig0026573:55645-55664	None:intergenic	50.0%
!	CCACAACAGTTGGTGTTCTG+TGG	-	tig0026573:55651-55670	None:intergenic	50.0%
	CCACAGAACACCAACTGTTG+TGG	+	tig0026573:55648-55667	Msa1429930:CDS	50.0%
!!	GTATTAAGCGGCGGGTTGAG+TGG	+	tig0026573:54528-54547	Msa1429930:five_prime_UTR	55.0%
!!	GGCGGGTTGAGTGGAGAATT+GGG	+	tig0026573:54537-54556	Msa1429930:five_prime_UTR	55.0%
	CGCAAAAGCCTTGGCAGTGT+GGG	-	tig0026573:55371-55390	None:intergenic	55.0%
!	CCACACTGCCAAGGCTTTTG+CGG	+	tig0026573:55369-55388	Msa1429930:CDS	55.0%
!!	GTATTAAGCGGCGGGTTGAG+TGG	+	tig0026573:54528-54547	Msa1429930:five_prime_UTR	55.0%
!!	GGCGGGTTGAGTGGAGAATT+GGG	+	tig0026573:54537-54556	Msa1429930:five_prime_UTR	55.0%
	CGCAAAAGCCTTGGCAGTGT+GGG	-	tig0026573:55371-55390	None:intergenic	55.0%
!	CCACACTGCCAAGGCTTTTG+CGG	+	tig0026573:55369-55388	Msa1429930:CDS	55.0%
!!	CGGCGGGTTGAGTGGAGAAT+TGG	+	tig0026573:54536-54555	Msa1429930:five_prime_UTR	60.0%
	CCGCAAAAGCCTTGGCAGTG+TGG	-	tig0026573:55372-55391	None:intergenic	60.0%
!!	CGGCGGGTTGAGTGGAGAAT+TGG	+	tig0026573:54536-54555	Msa1429930:five_prime_UTR	60.0%
	CCGCAAAAGCCTTGGCAGTG+TGG	-	tig0026573:55372-55391	None:intergenic	60.0%

Chromosome	Type	Strat	End	Strand	Name
tig0026573	gene	54388	55929	54388	ID=Msa1429930;Name=Msa1429930
tig0026573	mRNA	54388	55929	54388	ID=Msa1429930-mRNA-1;Parent=Msa1429930;Name=Msa1429930-mRNA-1;_AED=0.12;_eAED=0.12;_QI=195\|1\|1\|1\|0.83\|0.71\|7\|255\|204
tig0026573	exon	54388	54408	54388	ID=Msa1429930-mRNA-1:exon:6722;Parent=Msa1429930-mRNA-1
tig0026573	exon	54440	54630	54440	ID=Msa1429930-mRNA-1:exon:6723;Parent=Msa1429930-mRNA-1
tig0026573	exon	54710	54782	54710	ID=Msa1429930-mRNA-1:exon:6724;Parent=Msa1429930-mRNA-1
tig0026573	exon	54875	54922	54875	ID=Msa1429930-mRNA-1:exon:6725;Parent=Msa1429930-mRNA-1
tig0026573	exon	55009	55056	55009	ID=Msa1429930-mRNA-1:exon:6726;Parent=Msa1429930-mRNA-1
tig0026573	exon	55154	55485	55154	ID=Msa1429930-mRNA-1:exon:6727;Parent=Msa1429930-mRNA-1
tig0026573	exon	55578	55929	55578	ID=Msa1429930-mRNA-1:exon:6728;Parent=Msa1429930-mRNA-1
tig0026573	five_prime_UTR	54388	54408	54388	ID=Msa1429930-mRNA-1:five_prime_utr;Parent=Msa1429930-mRNA-1
tig0026573	five_prime_UTR	54440	54613	54440	ID=Msa1429930-mRNA-1:five_prime_utr;Parent=Msa1429930-mRNA-1
tig0026573	CDS	54614	54630	54614	ID=Msa1429930-mRNA-1:cds;Parent=Msa1429930-mRNA-1
tig0026573	CDS	54710	54782	54710	ID=Msa1429930-mRNA-1:cds;Parent=Msa1429930-mRNA-1
tig0026573	CDS	54875	54922	54875	ID=Msa1429930-mRNA-1:cds;Parent=Msa1429930-mRNA-1
tig0026573	CDS	55009	55056	55009	ID=Msa1429930-mRNA-1:cds;Parent=Msa1429930-mRNA-1
tig0026573	CDS	55154	55485	55154	ID=Msa1429930-mRNA-1:cds;Parent=Msa1429930-mRNA-1
tig0026573	CDS	55578	55674	55578	ID=Msa1429930-mRNA-1:cds;Parent=Msa1429930-mRNA-1
tig0026573	three_prime_UTR	55675	55929	55675	ID=Msa1429930-mRNA-1:three_prime_utr;Parent=Msa1429930-mRNA-1

Gene Sequence

>Msa1429930

ATGAGCAACAACGAATACGATTACCTGTTTAAACTTCTGATTATTGGAGATTCCTCTGTTGGAAAATCTTGCTTGCTTCTCAGATTTGCTGATGACTCATATGATGACACCTACATTAGTACCATCGGCGTTGATTTCAAAATCAGAACTGTTGAACTTGAAGGCAAAACTGCCAAGCTGCAGATTTGGGATACTGCTGGACAGGAACGATTCAGAACTATTACTAGCAGTTACTATAGAGGAGCACATGGAATCATTATTGTTTATGATGTCACTGATATTCAAAGTTTCAACAATGTTAAACAGTGGTTACATGAAATCGATAGATATGCTAATCACTCTGTCTCCAAGCTTCTTGTTGGGAATAAATGCGATCTCACCCACAACAAGCTTGTTCAAACCCACACTGCCAAGGCTTTTGCGGATCACCTTGCTATCCCTTTCCTTGAGACAAGTGCTAAAGACTCCATCAATGTCGAGCAGGCTTTCTTAACTATGGCAGCCGAGATTAAGAACAAGATGGGAACCCAACCAACAACTGGTACTAAGTCAGCAGCAGAATCTGTTCAGATCAAGGGGCAGCCAATCCCACAGAACACCAACTGTTGTGGTTAG

Protein sequence

>Msa1429930

MSNNEYDYLFKLLIIGDSSVGKSCLLLRFADDSYDDTYISTIGVDFKIRTVELEGKTAKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDIQSFNNVKQWLHEIDRYANHSVSKLLVGNKCDLTHNKLVQTHTAKAFADHLAIPFLETSAKDSINVEQAFLTMAAEIKNKMGTQPTTGTKSAAESVQIKGQPIPQNTNCCG*