Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0435400 | XP_024635119.1 | 96.371 | 248 | 9 | 0 | 1 | 248 | 117 | 364 | 3.79e-167 | 476 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0435400 | sp|F1DLK1|DSE1_NICBE | 68.807 | 218 | 67 | 1 | 32 | 248 | 158 | 375 | 3.82e-110 | 325 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0435400 | G7J4P6 | 96.371 | 248 | 9 | 0 | 1 | 248 | 117 | 364 | 1.81e-167 | 476 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0015390 | Msa0435400 | 0.811695 | 6.154543e-51 | -8.615850e-47 |
| Msa0015400 | Msa0435400 | 0.802239 | 6.164707e-49 | -8.615850e-47 |
| Msa0017510 | Msa0435400 | 0.827514 | 1.500443e-54 | -8.615850e-47 |
| Msa0028640 | Msa0435400 | 0.804926 | 1.708816e-49 | -8.615850e-47 |
| Msa0029310 | Msa0435400 | 0.803581 | 3.256269e-49 | -8.615850e-47 |
| Msa0089630 | Msa0435400 | 0.806875 | 6.650842e-50 | -8.615850e-47 |
| Msa0141620 | Msa0435400 | 0.800273 | 1.557395e-48 | -8.615850e-47 |
| Msa0145440 | Msa0435400 | 0.810130 | 1.343415e-50 | -8.615850e-47 |
| Msa0157290 | Msa0435400 | 0.827963 | 1.170206e-54 | -8.615850e-47 |
| Msa0165210 | Msa0435400 | 0.804995 | 1.652576e-49 | -8.615850e-47 |
| Msa0166870 | Msa0435400 | 0.813483 | 2.502094e-51 | -8.615850e-47 |
| Msa0171300 | Msa0435400 | 0.835563 | 1.560218e-56 | -8.615850e-47 |
| Msa0226890 | Msa0435400 | 0.808868 | 2.506739e-50 | -8.615850e-47 |
| Msa0366240 | Msa0435400 | 0.830498 | 2.838967e-55 | -8.615850e-47 |
| Msa0388960 | Msa0435400 | 0.838791 | 2.331617e-57 | -8.615850e-47 |
| Msa0393080 | Msa0435400 | 0.802610 | 5.170084e-49 | -8.615850e-47 |
| Msa0395790 | Msa0435400 | 0.810941 | 8.971263e-51 | -8.615850e-47 |
| Msa0410650 | Msa0435400 | 0.814687 | 1.356963e-51 | -8.615850e-47 |
| Msa0426640 | Msa0435400 | 0.818396 | 2.003842e-52 | -8.615850e-47 |
| Msa0428590 | Msa0435400 | 0.827943 | 1.183347e-54 | -8.615850e-47 |
| Msa0435390 | Msa0435400 | 0.978975 | 5.806755e-147 | -8.615850e-47 |
| Msa0435400 | Msa0440750 | 0.811678 | 6.209064e-51 | -8.615850e-47 |
| Msa0435400 | Msa0466390 | 0.814765 | 1.303860e-51 | -8.615850e-47 |
| Msa0435400 | Msa0484780 | 0.804706 | 1.898801e-49 | -8.615850e-47 |
| Msa0435400 | Msa0495320 | 0.808699 | 2.724736e-50 | -8.615850e-47 |
| Msa0435400 | Msa0495330 | 0.820756 | 5.797965e-53 | -8.615850e-47 |
| Msa0435400 | Msa0507680 | 0.810441 | 1.151089e-50 | -8.615850e-47 |
| Msa0435400 | Msa0512750 | 0.805877 | 1.079780e-49 | -8.615850e-47 |
| Msa0435400 | Msa0523460 | 0.805784 | 1.129583e-49 | -8.615850e-47 |
| Msa0435400 | Msa0547890 | 0.802798 | 4.727504e-49 | -8.615850e-47 |
| Msa0435400 | Msa0554050 | 0.821208 | 4.561420e-53 | -8.615850e-47 |
| Msa0435400 | Msa0576880 | 0.821065 | 4.920578e-53 | -8.615850e-47 |
| Msa0435400 | Msa0578860 | 0.809050 | 2.291157e-50 | -8.615850e-47 |
| Msa0435400 | Msa0593650 | 0.803645 | 3.158136e-49 | -8.615850e-47 |
| Msa0435400 | Msa0602240 | 0.813169 | 2.932067e-51 | -8.615850e-47 |
| Msa0435400 | Msa0602250 | 0.816181 | 6.312164e-52 | -8.615850e-47 |
| Msa0435400 | Msa0610430 | 0.801381 | 9.248552e-49 | -8.615850e-47 |
| Msa0435400 | Msa0626410 | 0.818609 | 1.792681e-52 | -8.615850e-47 |
| Msa0435400 | Msa0630720 | 0.807596 | 4.680171e-50 | -8.615850e-47 |
| Msa0435400 | Msa0657970 | 0.813639 | 2.312284e-51 | -8.615850e-47 |
| Msa0435400 | Msa0672570 | 0.803219 | 3.869413e-49 | -8.615850e-47 |
| Msa0435400 | Msa0673460 | 0.811335 | 7.370116e-51 | -8.615850e-47 |
| Msa0435400 | Msa0677410 | 0.809353 | 1.973682e-50 | -8.615850e-47 |
| Msa0435400 | Msa0691010 | 0.808042 | 3.760807e-50 | -8.615850e-47 |
| Msa0435400 | Msa0693380 | 0.805379 | 1.373692e-49 | -8.615850e-47 |
| Msa0435400 | Msa0703050 | 0.825678 | 4.112336e-54 | -8.615850e-47 |
| Msa0435400 | Msa0735170 | 0.822349 | 2.484932e-53 | -8.615850e-47 |
| Msa0435400 | Msa0749290 | 0.808751 | 2.655898e-50 | -8.615850e-47 |
| Msa0435400 | Msa0813200 | 0.805310 | 1.419591e-49 | -8.615850e-47 |
| Msa0435400 | Msa0880140 | 0.824841 | 6.487532e-54 | -8.615850e-47 |
| Msa0435400 | Msa0893950 | 0.803590 | 3.242592e-49 | -8.615850e-47 |
| Msa0435400 | Msa0896750 | 0.829617 | 4.656716e-55 | -8.615850e-47 |
| Msa0435400 | Msa0907070 | 0.809945 | 1.472504e-50 | -8.615850e-47 |
| Msa0435400 | Msa0908050 | 0.808729 | 2.683601e-50 | -8.615850e-47 |
| Msa0435400 | Msa0923330 | 0.809250 | 2.076592e-50 | -8.615850e-47 |
| Msa0435400 | Msa0938220 | 0.806290 | 8.839182e-50 | -8.615850e-47 |
| Msa0435400 | Msa0969520 | 0.825885 | 3.673019e-54 | -8.615850e-47 |
| Msa0435400 | Msa0993290 | 0.803526 | 3.342667e-49 | -8.615850e-47 |
| Msa0435400 | Msa0993600 | 0.801877 | 7.316725e-49 | -8.615850e-47 |
| Msa0435400 | Msa1014540 | 0.817009 | 4.118792e-52 | -8.615850e-47 |
| Msa0435400 | Msa1030970 | 0.818298 | 2.108158e-52 | -8.615850e-47 |
| Msa0435400 | Msa1046300 | 0.812258 | 4.640975e-51 | -8.615850e-47 |
| Msa0435400 | Msa1075220 | -0.813838 | 2.090412e-51 | -8.615850e-47 |
| Msa0435400 | Msa1082500 | 0.822849 | 1.900704e-53 | -8.615850e-47 |
| Msa0435400 | Msa1085200 | 0.816425 | 5.566347e-52 | -8.615850e-47 |
| Msa0435400 | Msa1090260 | 0.802716 | 4.916993e-49 | -8.615850e-47 |
| Msa0435400 | Msa1131220 | 0.811948 | 5.421938e-51 | -8.615850e-47 |
| Msa0435400 | Msa1151910 | 0.819028 | 1.439837e-52 | -8.615850e-47 |
| Msa0435400 | Msa1162550 | -0.813936 | 1.988526e-51 | -8.615850e-47 |
| Msa0435400 | Msa1168160 | 0.810598 | 1.064715e-50 | -8.615850e-47 |
| Msa0435400 | Msa1190400 | 0.818877 | 1.558315e-52 | -8.615850e-47 |
| Msa0435400 | Msa1199570 | 0.821963 | 3.052935e-53 | -8.615850e-47 |
| Msa0435400 | Msa1207220 | 0.806591 | 7.634912e-50 | -8.615850e-47 |
| Msa0435400 | Msa1212940 | 0.819810 | 9.553803e-53 | -8.615850e-47 |
| Msa0435400 | Msa1242220 | 0.800267 | 1.561704e-48 | -8.615850e-47 |
| Msa0435400 | Msa1243640 | 0.801659 | 8.112274e-49 | -8.615850e-47 |
| Msa0435400 | Msa1244250 | 0.823135 | 1.630357e-53 | -8.615850e-47 |
| Msa0435400 | Msa1244610 | 0.803854 | 2.857574e-49 | -8.615850e-47 |
| Msa0435400 | Msa1277660 | 0.802924 | 4.453478e-49 | -8.615850e-47 |
| Msa0435400 | Msa1283860 | 0.828697 | 7.783649e-55 | -8.615850e-47 |
| Msa0435400 | Msa1284680 | 0.808381 | 3.184267e-50 | -8.615850e-47 |
| Msa0435400 | Msa1300490 | 0.803275 | 3.768414e-49 | -8.615850e-47 |
| Msa0435400 | Msa1308380 | 0.817680 | 2.907947e-52 | -8.615850e-47 |
| Msa0435400 | Msa1313150 | 0.826174 | 3.135836e-54 | -8.615850e-47 |
| Msa0435400 | Msa1322890 | 0.802936 | 4.428324e-49 | -8.615850e-47 |
| Msa0435400 | Msa1328710 | 0.824005 | 1.019994e-53 | -8.615850e-47 |
| Msa0435400 | Msa1336710 | 0.804376 | 2.225857e-49 | -8.615850e-47 |
| Msa0435400 | Msa1340650 | 0.805244 | 1.465963e-49 | -8.615850e-47 |
| Msa0435400 | Msa1351620 | 0.807041 | 6.133681e-50 | -8.615850e-47 |
| Msa0435400 | Msa1359040 | 0.829590 | 4.726700e-55 | -8.615850e-47 |
| Msa0435400 | Msa1372760 | 0.816713 | 4.798394e-52 | -8.615850e-47 |
| Msa0435400 | Msa1409870 | 0.825806 | 3.834596e-54 | -8.615850e-47 |
| Msa0435400 | Msa1423880 | 0.822282 | 2.574374e-53 | -8.615850e-47 |
| Msa0435400 | Msa1424750 | 0.804071 | 2.576298e-49 | -8.615850e-47 |
| Msa0435400 | Msa1452240 | 0.802191 | 6.306386e-49 | -8.615850e-47 |
| Msa0435400 | Msa1460020 | 0.811110 | 8.248556e-51 | -8.615850e-47 |
| Msa0243100 | Msa0435400 | 0.812059 | 5.128133e-51 | -8.615850e-47 |
| Msa0244860 | Msa0435400 | 0.815819 | 7.603277e-52 | -8.615850e-47 |
| Msa0262510 | Msa0435400 | 0.805525 | 1.280194e-49 | -8.615850e-47 |
| Msa0282250 | Msa0435400 | 0.803547 | 3.308737e-49 | -8.615850e-47 |
| Msa0283450 | Msa0435400 | 0.823035 | 1.720513e-53 | -8.615850e-47 |
| Msa0283520 | Msa0435400 | 0.800293 | 1.542568e-48 | -8.615850e-47 |
| Msa0287650 | Msa0435400 | 0.803173 | 3.955354e-49 | -8.615850e-47 |
| Msa0317510 | Msa0435400 | 0.811906 | 5.537633e-51 | -8.615850e-47 |
| Msa0332000 | Msa0435400 | 0.804977 | 1.667275e-49 | -8.615850e-47 |
| Msa0338110 | Msa0435400 | 0.806474 | 8.083975e-50 | -8.615850e-47 |
| Msa0345970 | Msa0435400 | 0.820231 | 7.650645e-53 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0435400 | MtrunA17_Chr3g0142331 | 86.282 | 277 | 9 | 1 | 1 | 248 | 117 | 393 | 1.15e-164 | 461 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0435400 | AT4G29860.1 | 64.977 | 217 | 74 | 1 | 32 | 246 | 166 | 382 | 2.88e-105 | 310 |
Find 69 sgRNAs with CRISPR-Local
Find 421 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CATTGTTTAAGGTTGAAATT+TGG | 0.157257 | 3_2:+88538136 | Msa0435400:intron |
| TGATATTAGTATGATGTATT+AGG | 0.234191 | 3_2:+88543460 | Msa0435400:exon |
| ACACGTCTCCCTTCAAATAT+TGG | 0.280177 | 3_2:+88538183 | Msa0435400:CDS |
| CTATCATATGTGGCTTTGTC+GGG | 0.310446 | 3_2:+88538025 | Msa0435400:CDS |
| TGGAATTTCACAGAACTTAC+TGG | 0.315860 | 3_2:-88541676 | None:intergenic |
| TATGAGCCTCTTCTGTTTCA+AGG | 0.331258 | 3_2:-88537247 | None:intergenic |
| ATTGTTTAAGGTTGAAATTT+GGG | 0.336934 | 3_2:+88538137 | Msa0435400:intron |
| TTCGTCTGATTGTAAACTTA+TGG | 0.343925 | 3_2:+88543381 | Msa0435400:CDS |
| TCATACTAATATCATGTTCT+TGG | 0.349256 | 3_2:-88543451 | None:intergenic |
| CAACTGCTGGCTGGGACCAC+AGG | 0.361390 | 3_2:+88542780 | Msa0435400:CDS |
| GGCAAAATTGCTGCAACTGC+TGG | 0.372442 | 3_2:+88542767 | Msa0435400:CDS |
| GATATTAGTATGATGTATTA+GGG | 0.415849 | 3_2:+88543461 | Msa0435400:exon |
| GCTATCATATGTGGCTTTGT+CGG | 0.422647 | 3_2:+88538024 | Msa0435400:CDS |
| AAATTGCTGCAACTGCTGGC+TGG | 0.431609 | 3_2:+88542771 | Msa0435400:CDS |
| TTGGAGCGACCTGGCATCTC+AGG | 0.432105 | 3_2:+88542725 | Msa0435400:CDS |
| CAGCTAAGGCGTTTCCTTTG+CGG | 0.433322 | 3_2:-88543185 | None:intergenic |
| GTGAAATTCCATTCTGAGCC+AGG | 0.437622 | 3_2:+88541688 | Msa0435400:CDS |
| TGGTGGGATGTACGGAATCC+TGG | 0.454971 | 3_2:+88541649 | Msa0435400:CDS |
| CAGAGTACGGGGTCAAAAGC+AGG | 0.457854 | 3_2:+88537206 | Msa0435400:CDS |
| AGTTGTTCTGAAAGCTCTGA+AGG | 0.466718 | 3_2:+88537278 | Msa0435400:CDS |
| AATTGCTGCAACTGCTGGCT+GGG | 0.467224 | 3_2:+88542772 | Msa0435400:CDS |
| GTACAGCTTGGATCATTCTT+CGG | 0.473747 | 3_2:+88541862 | Msa0435400:CDS |
| TACTAATATCATGTTCTTGG+AGG | 0.491008 | 3_2:-88543448 | None:intergenic |
| TCTTCAATTGTTAGCAGCAA+AGG | 0.493130 | 3_2:+88538213 | Msa0435400:CDS |
| CCATGCTTTGGTGGGATGTA+CGG | 0.494219 | 3_2:+88541641 | Msa0435400:CDS |
| GTATTGACGGATCTTGCAAA+GGG | 0.501644 | 3_2:+88541804 | Msa0435400:CDS |
| GAGTTACTACCAATATTTGA+AGG | 0.504307 | 3_2:-88538192 | None:intergenic |
| GGCATCTCAATTCGGCCTGA+TGG | 0.506609 | 3_2:+88542746 | Msa0435400:CDS |
| ACAGAACTTACTGGAACTCC+AGG | 0.506661 | 3_2:-88541667 | None:intergenic |
| ATGAAGATGGTACCATGCTT+TGG | 0.521156 | 3_2:+88541629 | Msa0435400:CDS |
| GCATCTCAGGCATCTCAATT+CGG | 0.527846 | 3_2:+88542738 | Msa0435400:CDS |
| CATGGCTAAGAATCAGAGTA+CGG | 0.527885 | 3_2:+88537193 | None:intergenic |
| CAATTAAGGGCTATCATATG+TGG | 0.530557 | 3_2:+88538015 | Msa0435400:intron |
| TATCATATGTGGCTTTGTCG+GGG | 0.531270 | 3_2:+88538026 | Msa0435400:CDS |
| GTTCTGAGCATTGGTATTGA+CGG | 0.538890 | 3_2:+88541791 | Msa0435400:intron |
| ATTGAGATGCCTGAGATGCC+AGG | 0.543183 | 3_2:-88542734 | None:intergenic |
| ATGGCTAAGAATCAGAGTAC+GGG | 0.543954 | 3_2:+88537194 | Msa0435400:CDS |
| TGCATCTGCCGACACAATGG+TGG | 0.557660 | 3_2:+88543408 | Msa0435400:CDS |
| GGTATTGACGGATCTTGCAA+AGG | 0.560279 | 3_2:+88541803 | Msa0435400:CDS |
| CGACACAATGGTGGCGCTGT+GGG | 0.564576 | 3_2:+88543417 | Msa0435400:CDS |
| TGTCGATACCTGGCTCAGAA+TGG | 0.564737 | 3_2:-88541696 | None:intergenic |
| ATGATACTTAAGTACAGCTA+AGG | 0.567428 | 3_2:-88543199 | None:intergenic |
| AGGATATATAATTACCGCAA+AGG | 0.569818 | 3_2:+88543171 | Msa0435400:CDS |
| AGAGTACGGGGTCAAAAGCA+GGG | 0.576846 | 3_2:+88537207 | Msa0435400:CDS |
| GAAATCACATTGGAGCGACC+TGG | 0.577804 | 3_2:+88542716 | Msa0435400:CDS |
| CTCTGCATCTGCCGACACAA+TGG | 0.579223 | 3_2:+88543405 | Msa0435400:CDS |
| CATTGTGTCGGCAGATGCAG+AGG | 0.583387 | 3_2:-88543404 | None:intergenic |
| TTTCTTGTCAGGCATGTGCA+TGG | 0.585675 | 3_2:+88538598 | Msa0435400:intron |
| AAGTGTTGTAGATATGAAGA+TGG | 0.590005 | 3_2:+88541616 | Msa0435400:intron |
| AAGATGGTACCATGCTTTGG+TGG | 0.590770 | 3_2:+88541632 | Msa0435400:CDS |
| TACGGGGTCAAAAGCAGGGG+AGG | 0.593678 | 3_2:+88537211 | Msa0435400:CDS |
| GAGTACGGGGTCAAAAGCAG+GGG | 0.597141 | 3_2:+88537208 | Msa0435400:CDS |
| TCTCGGGAGCTGCAGATGAG+AGG | 0.598112 | 3_2:+88541831 | Msa0435400:CDS |
| TTTACCTTAGGGTACATGTG+TGG | 0.601199 | 3_2:+88542685 | Msa0435400:intron |
| TGTGTACCATCTGAATCTCA+AGG | 0.602729 | 3_2:+88538632 | Msa0435400:CDS |
| CGTACTCTGATTCTTAGCCA+TGG | 0.608659 | 3_2:-88537192 | None:intergenic |
| CCACAGCGCCACCATTGTGT+CGG | 0.609267 | 3_2:-88543416 | None:intergenic |
| ATCATATGTGGCTTTGTCGG+GGG | 0.609638 | 3_2:+88538027 | Msa0435400:CDS |
| AGTTACTACCAATATTTGAA+GGG | 0.610741 | 3_2:-88538191 | None:intergenic |
| AGATTGCCTTGAAACAGAAG+AGG | 0.618951 | 3_2:+88537241 | Msa0435400:CDS |
| CCGACACAATGGTGGCGCTG+TGG | 0.629692 | 3_2:+88543416 | Msa0435400:CDS |
| GAGGATTGTGATGTACAGCT+TGG | 0.629834 | 3_2:+88541850 | Msa0435400:CDS |
| CCGTACATCCCACCAAAGCA+TGG | 0.636894 | 3_2:-88541641 | None:intergenic |
| GGTCAATAAAGAAATCACAT+TGG | 0.651588 | 3_2:+88542706 | Msa0435400:CDS |
| ATTGACGGATCTTGCAAAGG+GGG | 0.652410 | 3_2:+88541806 | Msa0435400:CDS |
| AGATGGTACCATGCTTTGGT+GGG | 0.687336 | 3_2:+88541633 | Msa0435400:CDS |
| ACTTAAGTATCATCATGCCA+CGG | 0.698852 | 3_2:+88543209 | Msa0435400:CDS |
| TGGCTAAGAATCAGAGTACG+GGG | 0.711382 | 3_2:+88537195 | Msa0435400:CDS |
| TATTGACGGATCTTGCAAAG+GGG | 0.721177 | 3_2:+88541805 | Msa0435400:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTCAATAAATTTTATACTA+TGG | - | chr3_2:88540278-88540297 | None:intergenic | 10.0% |
| !! | AAACATTTGAAGAATATAAA+AGG | - | chr3_2:88537932-88537951 | None:intergenic | 15.0% |
| !! | CATAATATTGTTAACAAAAA+AGG | - | chr3_2:88537993-88538012 | None:intergenic | 15.0% |
| !! | AACAATATTATGTACAATTA+AGG | + | chr3_2:88538001-88538020 | Msa0435400:intron | 15.0% |
| !! | ACAATATTATGTACAATTAA+GGG | + | chr3_2:88538002-88538021 | Msa0435400:intron | 15.0% |
| !! | TAATATTTAAATCAGACAAA+CGG | - | chr3_2:88539635-88539654 | None:intergenic | 15.0% |
| !! | TTGAAAAGAATCTTATAAAA+AGG | + | chr3_2:88540431-88540450 | Msa0435400:intron | 15.0% |
| !! | TGAAAAGAATCTTATAAAAA+GGG | + | chr3_2:88540432-88540451 | Msa0435400:intron | 15.0% |
| !!! | AAATATTTTTTATGGAAATC+TGG | + | chr3_2:88540993-88541012 | Msa0435400:intron | 15.0% |
| !!! | AATATTTTTTATGGAAATCT+GGG | + | chr3_2:88540994-88541013 | Msa0435400:intron | 15.0% |
| !!! | CTTAAAGATATTTTTAATGT+GGG | - | chr3_2:88541450-88541469 | None:intergenic | 15.0% |
| !!! | ACTTAAAGATATTTTTAATG+TGG | - | chr3_2:88541451-88541470 | None:intergenic | 15.0% |
| !!! | TGAATATATTATCTTTTTAG+AGG | - | chr3_2:88542127-88542146 | None:intergenic | 15.0% |
| !! | AAGATTTATTAAGTAAACTA+AGG | + | chr3_2:88542423-88542442 | Msa0435400:intron | 15.0% |
| !!! | TTTTACACATCAAAGAATAT+GGG | + | chr3_2:88537707-88537726 | Msa0435400:intron | 20.0% |
| !! | AATAACAAAATTCTTAGACT+TGG | + | chr3_2:88537737-88537756 | Msa0435400:intron | 20.0% |
| !! | AATATTGTTAACAAAAAAGG+TGG | - | chr3_2:88537990-88538009 | None:intergenic | 20.0% |
| !!! | ATTGTTTAAGGTTGAAATTT+GGG | + | chr3_2:88538137-88538156 | Msa0435400:intron | 20.0% |
| !! | TGAGAATTTCAAAAAAATGA+TGG | - | chr3_2:88538279-88538298 | None:intergenic | 20.0% |
| !! | AGAAAATATAACCAAAGAAT+GGG | - | chr3_2:88538556-88538575 | None:intergenic | 20.0% |
| !!! | TTCTATTTATTTTGGTAACT+AGG | - | chr3_2:88539271-88539290 | None:intergenic | 20.0% |
| !!! | CTCAATACTTCTATTTATTT+TGG | - | chr3_2:88539279-88539298 | None:intergenic | 20.0% |
| !! | AAATCAGAGAAAAAGAAAAA+AGG | + | chr3_2:88539469-88539488 | Msa0435400:intron | 20.0% |
| !!! | AATGGATAGATTTGATTTAA+GGG | + | chr3_2:88539500-88539519 | Msa0435400:intron | 20.0% |
| !! | AATATTTAAATCAGACAAAC+GGG | - | chr3_2:88539634-88539653 | None:intergenic | 20.0% |
| !! | ACTTAGTTTAAACTCAAATA+TGG | + | chr3_2:88539702-88539721 | Msa0435400:intron | 20.0% |
| !! | ACATAAATCTAATACAATGT+AGG | - | chr3_2:88539979-88539998 | None:intergenic | 20.0% |
| !!! | AATCAAACTTTTGAAACAAT+AGG | + | chr3_2:88540573-88540592 | Msa0435400:intron | 20.0% |
| !! | AAATAAAAAATGACAGAATG+TGG | - | chr3_2:88540605-88540624 | None:intergenic | 20.0% |
| !!! | AGGAGCTTAAATATTTTTTA+TGG | + | chr3_2:88540985-88541004 | Msa0435400:intron | 20.0% |
| !! | CTTTATTAATTAATGTTGTC+AGG | + | chr3_2:88541484-88541503 | Msa0435400:intron | 20.0% |
| !! | ACACATTTATATTACAAATC+AGG | - | chr3_2:88541554-88541573 | None:intergenic | 20.0% |
| !! | TGAAAATAATGAGTAATCTA+AGG | - | chr3_2:88541736-88541755 | None:intergenic | 20.0% |
| !! | GGAATACAGATAAAAATTAT+AGG | - | chr3_2:88541933-88541952 | None:intergenic | 20.0% |
| !!! | ATCATAGTTTTATTCTAAGA+AGG | - | chr3_2:88541954-88541973 | None:intergenic | 20.0% |
| !! | TAAGTTTGACTATTGAAATA+AGG | - | chr3_2:88542007-88542026 | None:intergenic | 20.0% |
| !! | ACATTAACAACAACTAATTA+TGG | - | chr3_2:88542862-88542881 | None:intergenic | 20.0% |
| !! | AATGTAGGAGAAAAAAAAAA+GGG | - | chr3_2:88543051-88543070 | None:intergenic | 20.0% |
| !! | TAATGTAGGAGAAAAAAAAA+AGG | - | chr3_2:88543052-88543071 | None:intergenic | 20.0% |
| !! | TTGAAACAATACATCATTAT+TGG | + | chr3_2:88543273-88543292 | Msa0435400:intron | 20.0% |
| !! | TGATATTAGTATGATGTATT+AGG | + | chr3_2:88543460-88543479 | Msa0435400:exon | 20.0% |
| !! | GATATTAGTATGATGTATTA+GGG | + | chr3_2:88543461-88543480 | Msa0435400:exon | 20.0% |
| !!! | AGAACTTTTGAAACTTGTTA+CGG | + | chr3_2:88537333-88537352 | Msa0435400:intron | 25.0% |
| !!! | TAAATTTACTGATTTACTGC+TGG | - | chr3_2:88537621-88537640 | None:intergenic | 25.0% |
| ! | GCAGTAAATCAGTAAATTTA+AGG | + | chr3_2:88537621-88537640 | Msa0435400:intron | 25.0% |
| !! | CTTTTACACATCAAAGAATA+TGG | + | chr3_2:88537706-88537725 | Msa0435400:intron | 25.0% |
| ! | TAAAAGGAAACAACATAGAA+AGG | - | chr3_2:88537916-88537935 | None:intergenic | 25.0% |
| !! | CATTGTTTAAGGTTGAAATT+TGG | + | chr3_2:88538136-88538155 | Msa0435400:intron | 25.0% |
| ! | AGTTACTACCAATATTTGAA+GGG | - | chr3_2:88538194-88538213 | None:intergenic | 25.0% |
| ! | AGAATGCAAACATCAATTTA+AGG | - | chr3_2:88538456-88538475 | None:intergenic | 25.0% |
| ! | GAGAAAATATAACCAAAGAA+TGG | - | chr3_2:88538557-88538576 | None:intergenic | 25.0% |
| !! | TCAAGGATTTTTAAATGTCA+TGG | + | chr3_2:88538649-88538668 | Msa0435400:CDS | 25.0% |
| ! | CAATATTGGAAGTTACTTAA+GGG | + | chr3_2:88538886-88538905 | Msa0435400:intron | 25.0% |
| ! | AATATTGGAAGTTACTTAAG+GGG | + | chr3_2:88538887-88538906 | Msa0435400:intron | 25.0% |
| ! | CATTTCTCAAAAGAAATGAA+GGG | + | chr3_2:88538956-88538975 | Msa0435400:intron | 25.0% |
| ! | GTCATTAAATTCATGTAGAT+TGG | + | chr3_2:88539174-88539193 | Msa0435400:intron | 25.0% |
| !! | TTGGTAACTAGGTAAAATAT+TGG | - | chr3_2:88539260-88539279 | None:intergenic | 25.0% |
| !! | AAAATTTTATCTTTCTCCCT+TGG | + | chr3_2:88539355-88539374 | Msa0435400:intron | 25.0% |
| !! | AAATTTTATCTTTCTCCCTT+GGG | + | chr3_2:88539356-88539375 | Msa0435400:intron | 25.0% |
| !!! | TTTTCTCTGATTTTTTTCGA+AGG | - | chr3_2:88539462-88539481 | None:intergenic | 25.0% |
| !! | AGAAAAAAGGCATAATAGAA+TGG | + | chr3_2:88539482-88539501 | Msa0435400:intron | 25.0% |
| !! | GAATGGATAGATTTGATTTA+AGG | + | chr3_2:88539499-88539518 | Msa0435400:intron | 25.0% |
| ! | ATATTTAAATCAGACAAACG+GGG | - | chr3_2:88539633-88539652 | None:intergenic | 25.0% |
| !!! | AATATTATTTTTCACCAGCT+TGG | + | chr3_2:88539648-88539667 | Msa0435400:intron | 25.0% |
| ! | AATCTAATACAATGTAGGTA+TGG | - | chr3_2:88539974-88539993 | None:intergenic | 25.0% |
| ! | ACAACGAAATTCTGTATTTA+GGG | - | chr3_2:88540228-88540247 | None:intergenic | 25.0% |
| ! | AAAATATGCAACATAGTTAG+AGG | + | chr3_2:88540372-88540391 | Msa0435400:intron | 25.0% |
| ! | AAGTAGTAAGTAATAACTGT+CGG | + | chr3_2:88540495-88540514 | Msa0435400:intron | 25.0% |
| !! | GGTTCAAATTTTGTTACTAA+TGG | - | chr3_2:88540524-88540543 | None:intergenic | 25.0% |
| ! | ATTATAAACCTTCCAAATTC+TGG | + | chr3_2:88540630-88540649 | Msa0435400:intron | 25.0% |
| ! | TTATAAACCTTCCAAATTCT+GGG | + | chr3_2:88540631-88540650 | Msa0435400:intron | 25.0% |
| ! | AAAAAATTGGTTAGAGTTTG+TGG | + | chr3_2:88540893-88540912 | Msa0435400:intron | 25.0% |
| ! | ATTAATTAATGTTGTCAGGT+AGG | + | chr3_2:88541488-88541507 | Msa0435400:intron | 25.0% |
| ! | TTAATTAATGTTGTCAGGTA+GGG | + | chr3_2:88541489-88541508 | Msa0435400:intron | 25.0% |
| ! | ATCTACAACACTTAGAAAAA+AGG | - | chr3_2:88541609-88541628 | None:intergenic | 25.0% |
| !! | CTCTGGTTATCTTATTTATA+TGG | + | chr3_2:88542069-88542088 | Msa0435400:intron | 25.0% |
| ! | TATGGTATTTGATTCTTAGA+TGG | + | chr3_2:88542087-88542106 | Msa0435400:intron | 25.0% |
| !!! | GATTCTTAGATGGATTAAAA+TGG | + | chr3_2:88542097-88542116 | Msa0435400:intron | 25.0% |
| ! | TATTGTGTAATTACAGTTGA+AGG | + | chr3_2:88542160-88542179 | Msa0435400:intron | 25.0% |
| ! | ATTGTGTAATTACAGTTGAA+GGG | + | chr3_2:88542161-88542180 | Msa0435400:intron | 25.0% |
| !! | TTTTTACCCATAATGATAAC+AGG | + | chr3_2:88542345-88542364 | Msa0435400:intron | 25.0% |
| !! | CCAAATTTTGAACATTTGAA+CGG | - | chr3_2:88542387-88542406 | None:intergenic | 25.0% |
| ! | AAGATACACAGATATGAAAA+AGG | - | chr3_2:88542664-88542683 | None:intergenic | 25.0% |
| !!! | TGTGTATCTTTTTTACCTTA+GGG | + | chr3_2:88542674-88542693 | Msa0435400:intron | 25.0% |
| ! | TTAAATCGTTTAAAAACCTG+TGG | - | chr3_2:88542799-88542818 | None:intergenic | 25.0% |
| !! | TTAGTTGTTGTTAATGTTCT+TGG | + | chr3_2:88542865-88542884 | Msa0435400:intron | 25.0% |
| ! | GTTAGTTGTTTGTCATAAAT+TGG | - | chr3_2:88542922-88542941 | None:intergenic | 25.0% |
| ! | TCTAATGCAGTTAAAACTAA+AGG | - | chr3_2:88542973-88542992 | None:intergenic | 25.0% |
| ! | AAACACATACTACATAATGT+AGG | - | chr3_2:88543066-88543085 | None:intergenic | 25.0% |
| !! | AATACCTTGATTATTTTCGT+TGG | + | chr3_2:88543100-88543119 | Msa0435400:intron | 25.0% |
| ! | TCATACTAATATCATGTTCT+TGG | - | chr3_2:88543454-88543473 | None:intergenic | 25.0% |
| CTAATATGGTAAAAAGTAGC+AGG | - | chr3_2:88537400-88537419 | None:intergenic | 30.0% | |
| ! | AATGTCGTGTTACTCTAATA+TGG | - | chr3_2:88537414-88537433 | None:intergenic | 30.0% |
| TGTGGAACAATAGAACTTTA+TGG | + | chr3_2:88537506-88537525 | Msa0435400:intron | 30.0% | |
| AGTATAAGCATGTCTATTTC+TGG | + | chr3_2:88537575-88537594 | Msa0435400:intron | 30.0% | |
| TAAAAGAAAAACGACAACAG+TGG | - | chr3_2:88537692-88537711 | None:intergenic | 30.0% | |
| AACATATATCAATCCAGACT+CGG | - | chr3_2:88537773-88537792 | None:intergenic | 30.0% | |
| ! | ATTAGGAATTTGGTCCATTT+TGG | - | chr3_2:88537889-88537908 | None:intergenic | 30.0% |
| TTCTTCATCTTTGTAAACTG+TGG | + | chr3_2:88538091-88538110 | Msa0435400:intron | 30.0% | |
| ACCAGTTCTATCATTGTTTA+AGG | + | chr3_2:88538125-88538144 | Msa0435400:intron | 30.0% | |
| ACCTTAAACAATGATAGAAC+TGG | - | chr3_2:88538129-88538148 | None:intergenic | 30.0% | |
| GAGTTACTACCAATATTTGA+AGG | - | chr3_2:88538195-88538214 | None:intergenic | 30.0% | |
| !!! | TTTTGAAATTCTCATTCCTC+AGG | + | chr3_2:88538285-88538304 | Msa0435400:intron | 30.0% |
| ACATACATACATGCATACAT+GGG | - | chr3_2:88538331-88538350 | None:intergenic | 30.0% | |
| AAGCAACAATTAAAGTGAGA+TGG | - | chr3_2:88538408-88538427 | None:intergenic | 30.0% | |
| TAATGCAATCATTTCTTGTC+AGG | + | chr3_2:88538587-88538606 | Msa0435400:intron | 30.0% | |
| AAAAATCCTTGAGATTCAGA+TGG | - | chr3_2:88538641-88538660 | None:intergenic | 30.0% | |
| ! | GATTTTTAAATGTCATGGCT+GGG | + | chr3_2:88538654-88538673 | Msa0435400:CDS | 30.0% |
| AGGAGTAAATCTTGATCATT+GGG | + | chr3_2:88538752-88538771 | Msa0435400:intron | 30.0% | |
| ACATTTAGGCATACCAATAT+TGG | + | chr3_2:88538872-88538891 | Msa0435400:intron | 30.0% | |
| CCTTAAGTAACTTCCAATAT+TGG | - | chr3_2:88538888-88538907 | None:intergenic | 30.0% | |
| CCAATATTGGAAGTTACTTA+AGG | + | chr3_2:88538885-88538904 | Msa0435400:intron | 30.0% | |
| !! | ATTTCTTTTGAGAAATGGAG+AGG | - | chr3_2:88538953-88538972 | None:intergenic | 30.0% |
| !! | CCTTCATTTCTTTTGAGAAA+TGG | - | chr3_2:88538958-88538977 | None:intergenic | 30.0% |
| CCATTTCTCAAAAGAAATGA+AGG | + | chr3_2:88538955-88538974 | Msa0435400:intron | 30.0% | |
| GATAGTGACACATATGATAT+TGG | + | chr3_2:88538989-88539008 | Msa0435400:intron | 30.0% | |
| CACAAGATCATGTTAAAGAT+TGG | - | chr3_2:88539103-88539122 | None:intergenic | 30.0% | |
| CAATCTTTAACATGATCTTG+TGG | + | chr3_2:88539101-88539120 | Msa0435400:intron | 30.0% | |
| ! | ATGTTATTTGTCCTGTTGTT+AGG | + | chr3_2:88539211-88539230 | Msa0435400:intron | 30.0% |
| ! | TGTTATTTGTCCTGTTGTTA+GGG | + | chr3_2:88539212-88539231 | Msa0435400:intron | 30.0% |
| GATTGTTTGTATTGTGCTTA+AGG | - | chr3_2:88539534-88539553 | None:intergenic | 30.0% | |
| TCATGTAATAATCAGTTCCA+AGG | - | chr3_2:88540141-88540160 | None:intergenic | 30.0% | |
| AACTGATTATTACATGACTC+TGG | + | chr3_2:88540144-88540163 | Msa0435400:intron | 30.0% | |
| ACATGACTCTGGTTATTTAT+TGG | + | chr3_2:88540155-88540174 | Msa0435400:intron | 30.0% | |
| CATGACTCTGGTTATTTATT+GGG | + | chr3_2:88540156-88540175 | Msa0435400:intron | 30.0% | |
| GGACGAATATGGTATTAAAT+TGG | - | chr3_2:88540207-88540226 | None:intergenic | 30.0% | |
| GACAACGAAATTCTGTATTT+AGG | - | chr3_2:88540229-88540248 | None:intergenic | 30.0% | |
| ATCACGAGAATTAAGAAAGT+TGG | + | chr3_2:88540252-88540271 | Msa0435400:intron | 30.0% | |
| CCTGTAACAAATACTATGAT+GGG | - | chr3_2:88540345-88540364 | None:intergenic | 30.0% | |
| ACCTGTAACAAATACTATGA+TGG | - | chr3_2:88540346-88540365 | None:intergenic | 30.0% | |
| GACAAGAAAAAATCTCAAGA+GGG | + | chr3_2:88540454-88540473 | Msa0435400:intron | 30.0% | |
| TCAAGAGGGTCTTTATATAT+AGG | + | chr3_2:88540468-88540487 | Msa0435400:intron | 30.0% | |
| CAAGAGGGTCTTTATATATA+GGG | + | chr3_2:88540469-88540488 | Msa0435400:intron | 30.0% | |
| ATCCTTTCAAATCCAATGTT+AGG | - | chr3_2:88540727-88540746 | None:intergenic | 30.0% | |
| TTGGATTTGAAAGGATAGTA+CGG | + | chr3_2:88540731-88540750 | Msa0435400:intron | 30.0% | |
| CCACATCAAAATAATCCATA+TGG | - | chr3_2:88540843-88540862 | None:intergenic | 30.0% | |
| !!! | CCATATGGATTATTTTGATG+TGG | + | chr3_2:88540840-88540859 | Msa0435400:intron | 30.0% |
| ! | ATAAAGGTTTTTCCATTTCC+AGG | + | chr3_2:88541042-88541061 | Msa0435400:intron | 30.0% |
| ! | TAAAGGTTTTTCCATTTCCA+GGG | + | chr3_2:88541043-88541062 | Msa0435400:intron | 30.0% |
| ATTGTCATAGAAACAAAGGA+GGG | - | chr3_2:88541157-88541176 | None:intergenic | 30.0% | |
| AATTGTCATAGAAACAAAGG+AGG | - | chr3_2:88541158-88541177 | None:intergenic | 30.0% | |
| TTGACATGAATAAGAAAGGA+TGG | - | chr3_2:88541222-88541241 | None:intergenic | 30.0% | |
| TCCTTTCTTATTCATGTCAA+AGG | + | chr3_2:88541222-88541241 | Msa0435400:intron | 30.0% | |
| CCTTTCTTATTCATGTCAAA+GGG | + | chr3_2:88541223-88541242 | Msa0435400:intron | 30.0% | |
| ! | AAGTGTTGTAGATATGAAGA+TGG | + | chr3_2:88541616-88541635 | Msa0435400:intron | 30.0% |
| AACTATGATGCTTCTAGTAA+TGG | + | chr3_2:88541965-88541984 | Msa0435400:intron | 30.0% | |
| !!! | CCTTTTGCTATTCAGATTAA+TGG | - | chr3_2:88542310-88542329 | None:intergenic | 30.0% |
| CCATTAATCTGAATAGCAAA+AGG | + | chr3_2:88542307-88542326 | Msa0435400:intron | 30.0% | |
| CCGTTCAAATGTTCAAAATT+TGG | + | chr3_2:88542384-88542403 | Msa0435400:intron | 30.0% | |
| !!! | CTGTGTATCTTTTTTACCTT+AGG | + | chr3_2:88542673-88542692 | Msa0435400:intron | 30.0% |
| GGTCAATAAAGAAATCACAT+TGG | + | chr3_2:88542706-88542725 | Msa0435400:CDS | 30.0% | |
| TTATGGATCATCAAGAAATG+TGG | - | chr3_2:88542845-88542864 | None:intergenic | 30.0% | |
| GATTCATGTCAATAATACTG+AGG | - | chr3_2:88542897-88542916 | None:intergenic | 30.0% | |
| TGTACCAACGAAAATAATCA+AGG | - | chr3_2:88543107-88543126 | None:intergenic | 30.0% | |
| ATATCCTTATTCTGCCAATA+AGG | - | chr3_2:88543158-88543177 | None:intergenic | 30.0% | |
| AGGATATATAATTACCGCAA+AGG | + | chr3_2:88543171-88543190 | Msa0435400:CDS | 30.0% | |
| ATGATACTTAAGTACAGCTA+AGG | - | chr3_2:88543202-88543221 | None:intergenic | 30.0% | |
| TTCGTCTGATTGTAAACTTA+TGG | + | chr3_2:88543381-88543400 | Msa0435400:CDS | 30.0% | |
| TACTAATATCATGTTCTTGG+AGG | - | chr3_2:88543451-88543470 | None:intergenic | 30.0% | |
| ! | TGTGAGTTCTAGTCAACAAT+TGG | + | chr3_2:88537303-88537322 | Msa0435400:intron | 35.0% |
| !!! | ACTTTTGAAACTTGTTACGG+TGG | + | chr3_2:88537336-88537355 | Msa0435400:intron | 35.0% |
| GAATTCAAATGTCAGGTTCA+TGG | - | chr3_2:88537371-88537390 | None:intergenic | 35.0% | |
| GAACTCTGAATTCAAATGTC+AGG | - | chr3_2:88537378-88537397 | None:intergenic | 35.0% | |
| ACGACATTCATTGAATTGTG+AGG | + | chr3_2:88537426-88537445 | Msa0435400:intron | 35.0% | |
| !! | CAAATTTGATAGCGTTGCAT+TGG | + | chr3_2:88537473-88537492 | Msa0435400:intron | 35.0% |
| TTATACTCAGAAAGCAACTG+TGG | - | chr3_2:88537562-88537581 | None:intergenic | 35.0% | |
| TAGCTGTATTTGAGCTTGTA+AGG | + | chr3_2:88537646-88537665 | Msa0435400:intron | 35.0% | |
| !! | TGAGTCTTCTCGCTTATTTT+TGG | + | chr3_2:88537833-88537852 | Msa0435400:intron | 35.0% |
| GAAAGGCAAGATTAGGAATT+TGG | - | chr3_2:88537899-88537918 | None:intergenic | 35.0% | |
| CAACATAGAAAGGCAAGATT+AGG | - | chr3_2:88537906-88537925 | None:intergenic | 35.0% | |
| CAATTAAGGGCTATCATATG+TGG | + | chr3_2:88538015-88538034 | Msa0435400:intron | 35.0% | |
| TCTTCAATTGTTAGCAGCAA+AGG | + | chr3_2:88538213-88538232 | Msa0435400:CDS | 35.0% | |
| CACATACATACATGCATACA+TGG | - | chr3_2:88538332-88538351 | None:intergenic | 35.0% | |
| ATTAATAGCTAGACCTTGAC+TGG | + | chr3_2:88538526-88538545 | Msa0435400:intron | 35.0% | |
| ! | GGATTTTTAAATGTCATGGC+TGG | + | chr3_2:88538653-88538672 | Msa0435400:CDS | 35.0% |
| ACGTCTTCAATGTGTATTTG+CGG | - | chr3_2:88538715-88538734 | None:intergenic | 35.0% | |
| GAGGAGTAAATCTTGATCAT+TGG | + | chr3_2:88538751-88538770 | Msa0435400:intron | 35.0% | |
| ACGATCCAAGTGATATAGAT+TGG | + | chr3_2:88538827-88538846 | Msa0435400:intron | 35.0% | |
| CTTGACCAATCTATATCACT+TGG | - | chr3_2:88538835-88538854 | None:intergenic | 35.0% | |
| CGCTTAAAAAGTCCTAAACT+CGG | + | chr3_2:88538919-88538938 | Msa0435400:intron | 35.0% | |
| GCTTAAAAAGTCCTAAACTC+GGG | + | chr3_2:88538920-88538939 | Msa0435400:intron | 35.0% | |
| ! | ATATGTGTCACTATCTCCAA+TGG | - | chr3_2:88538984-88539003 | None:intergenic | 35.0% |
| AGTGACACATATGATATTGG+TGG | + | chr3_2:88538992-88539011 | Msa0435400:intron | 35.0% | |
| GTGACACATATGATATTGGT+GGG | + | chr3_2:88538993-88539012 | Msa0435400:intron | 35.0% | |
| GATCTTGAAAGAAATGGAGA+GGG | - | chr3_2:88539058-88539077 | None:intergenic | 35.0% | |
| ACAAACAATCCTCCTTATGA+AGG | + | chr3_2:88539544-88539563 | Msa0435400:intron | 35.0% | |
| CATACATGTCATACAGATGT+TGG | - | chr3_2:88539598-88539617 | None:intergenic | 35.0% | |
| GTCTCGAACAAACTTCATTT+AGG | + | chr3_2:88539845-88539864 | Msa0435400:intron | 35.0% | |
| GAATCTTGACTATCCATACA+AGG | - | chr3_2:88539916-88539935 | None:intergenic | 35.0% | |
| GATTTATGTATGTCATGTCC+TGG | + | chr3_2:88539990-88540009 | Msa0435400:intron | 35.0% | |
| TGTGCAAACATGACAGAAAA+TGG | + | chr3_2:88540051-88540070 | Msa0435400:intron | 35.0% | |
| TCTGTATTTAGGGACGAATA+TGG | - | chr3_2:88540218-88540237 | None:intergenic | 35.0% | |
| ! | CCCATCATAGTATTTGTTAC+AGG | + | chr3_2:88540342-88540361 | Msa0435400:intron | 35.0% |
| GGACAAGAAAAAATCTCAAG+AGG | + | chr3_2:88540453-88540472 | Msa0435400:intron | 35.0% | |
| AAAAATGACAGAATGTGGCT+TGG | - | chr3_2:88540600-88540619 | None:intergenic | 35.0% | |
| TATGAGAAAACAAGCTACAG+CGG | - | chr3_2:88540696-88540715 | None:intergenic | 35.0% | |
| CATAAAACTGAGCCTAACAT+TGG | + | chr3_2:88540712-88540731 | Msa0435400:intron | 35.0% | |
| AGCCTAACATTGGATTTGAA+AGG | + | chr3_2:88540722-88540741 | Msa0435400:intron | 35.0% | |
| AGTATTGTGCACTGTGAATT+TGG | + | chr3_2:88540774-88540793 | Msa0435400:intron | 35.0% | |
| TGAATTTGGTACTACGTTTG+TGG | + | chr3_2:88540788-88540807 | Msa0435400:intron | 35.0% | |
| GAATTTGGTACTACGTTTGT+GGG | + | chr3_2:88540789-88540808 | Msa0435400:intron | 35.0% | |
| !! | GGAAGATTAAGGCATTGATT+TGG | + | chr3_2:88540816-88540835 | Msa0435400:intron | 35.0% |
| !!! | TTATTTTGATGTGGTCTGTC+TGG | + | chr3_2:88540849-88540868 | Msa0435400:intron | 35.0% |
| ! | TAGTAAGGTTTTGCTTTGCA+AGG | + | chr3_2:88540965-88540984 | Msa0435400:intron | 35.0% |
| CTGTACCATTAACACAAAAC+AGG | - | chr3_2:88541021-88541040 | None:intergenic | 35.0% | |
| GTGTTAATGGTACAGCATAA+AGG | + | chr3_2:88541026-88541045 | Msa0435400:intron | 35.0% | |
| ! | TAATAGCCATGATTAGCTCA+TGG | - | chr3_2:88541111-88541130 | None:intergenic | 35.0% |
| GGCAATTGTCATAGAAACAA+AGG | - | chr3_2:88541161-88541180 | None:intergenic | 35.0% | |
| CCCTTTGACATGAATAAGAA+AGG | - | chr3_2:88541226-88541245 | None:intergenic | 35.0% | |
| ATCACTATGCATATAAGAGG+AGG | - | chr3_2:88541277-88541296 | None:intergenic | 35.0% | |
| TCCTCTTATATGCATAGTGA+TGG | + | chr3_2:88541276-88541295 | Msa0435400:intron | 35.0% | |
| ! | AACTAGAAAGGTGTAACCAA+GGG | + | chr3_2:88541344-88541363 | Msa0435400:intron | 35.0% |
| TGGAATTTCACAGAACTTAC+TGG | - | chr3_2:88541679-88541698 | None:intergenic | 35.0% | |
| !!! | GATTTTGTAGTTCTGAGCAT+TGG | + | chr3_2:88541782-88541801 | Msa0435400:intron | 35.0% |
| !! | AGTTGAAGGGTTGATGTAAT+TGG | + | chr3_2:88542174-88542193 | Msa0435400:intron | 35.0% |
| TACCACTTCAAGAATACTTG+AGG | + | chr3_2:88542278-88542297 | Msa0435400:intron | 35.0% | |
| CAACAGCCTGTTATCATTAT+GGG | - | chr3_2:88542354-88542373 | None:intergenic | 35.0% | |
| !! | ATACAAACTTGCTACTGCAA+TGG | - | chr3_2:88542484-88542503 | None:intergenic | 35.0% |
| TTATTCTGCCAATAAGGTGA+CGG | - | chr3_2:88543152-88543171 | None:intergenic | 35.0% | |
| ACTTAAGTATCATCATGCCA+CGG | + | chr3_2:88543209-88543228 | Msa0435400:CDS | 35.0% | |
| ATGGCTAAGAATCAGAGTAC+GGG | + | chr3_2:88537194-88537213 | Msa0435400:CDS | 40.0% | |
| AGATTGCCTTGAAACAGAAG+AGG | + | chr3_2:88537241-88537260 | Msa0435400:CDS | 40.0% | |
| TATGAGCCTCTTCTGTTTCA+AGG | - | chr3_2:88537250-88537269 | None:intergenic | 40.0% | |
| !! | AGTTGTTCTGAAAGCTCTGA+AGG | + | chr3_2:88537278-88537297 | Msa0435400:CDS | 40.0% |
| TCAAATGTCAGGTTCATGGA+TGG | - | chr3_2:88537367-88537386 | None:intergenic | 40.0% | |
| !! | TGCATTGGCTGCAAAATTTG+TGG | + | chr3_2:88537488-88537507 | Msa0435400:intron | 40.0% |
| !!! | GTCTTCTCGCTTATTTTTGG+AGG | + | chr3_2:88537836-88537855 | Msa0435400:intron | 40.0% |
| ATCTCCAAAGTGCAATAGCA+GGG | - | chr3_2:88537862-88537881 | None:intergenic | 40.0% | |
| ! | CTTTGGAGATGGTACCAAAA+TGG | + | chr3_2:88537872-88537891 | Msa0435400:intron | 40.0% |
| !! | GCTATCATATGTGGCTTTGT+CGG | + | chr3_2:88538024-88538043 | Msa0435400:CDS | 40.0% |
| !! | CTATCATATGTGGCTTTGTC+GGG | + | chr3_2:88538025-88538044 | Msa0435400:CDS | 40.0% |
| !! | TATCATATGTGGCTTTGTCG+GGG | + | chr3_2:88538026-88538045 | Msa0435400:CDS | 40.0% |
| ATGATAGAACTGGTGAGCTT+GGG | - | chr3_2:88538119-88538138 | None:intergenic | 40.0% | |
| AATGATAGAACTGGTGAGCT+TGG | - | chr3_2:88538120-88538139 | None:intergenic | 40.0% | |
| ACACGTCTCCCTTCAAATAT+TGG | + | chr3_2:88538183-88538202 | Msa0435400:CDS | 40.0% | |
| AAGAATGGGAAATCCAGTCA+AGG | - | chr3_2:88538542-88538561 | None:intergenic | 40.0% | |
| TGACTGGATTTCCCATTCTT+TGG | + | chr3_2:88538542-88538561 | Msa0435400:intron | 40.0% | |
| TGTGTACCATCTGAATCTCA+AGG | + | chr3_2:88538632-88538651 | Msa0435400:CDS | 40.0% | |
| CGTCTTCAATGTGTATTTGC+GGG | - | chr3_2:88538714-88538733 | None:intergenic | 40.0% | |
| TGTCTCCTCATCTCACATTT+AGG | + | chr3_2:88538858-88538877 | Msa0435400:intron | 40.0% | |
| GTATGCCTAAATGTGAGATG+AGG | - | chr3_2:88538866-88538885 | None:intergenic | 40.0% | |
| AAAGAAATGAAGGGCTCCAT+TGG | + | chr3_2:88538965-88538984 | Msa0435400:intron | 40.0% | |
| GGATCTTGAAAGAAATGGAG+AGG | - | chr3_2:88539059-88539078 | None:intergenic | 40.0% | |
| GGTTGGGATCTTGAAAGAAA+TGG | - | chr3_2:88539064-88539083 | None:intergenic | 40.0% | |
| AAGATTGGAATGCCGAGTTT+GGG | - | chr3_2:88539088-88539107 | None:intergenic | 40.0% | |
| AAAGATTGGAATGCCGAGTT+TGG | - | chr3_2:88539089-88539108 | None:intergenic | 40.0% | |
| CACAAATACACACAGTGAGA+CGG | - | chr3_2:88539127-88539146 | None:intergenic | 40.0% | |
| CAAACTCAGCTTGAAAGAGA+GGG | - | chr3_2:88539436-88539455 | None:intergenic | 40.0% | |
| TCAAACTCAGCTTGAAAGAG+AGG | - | chr3_2:88539437-88539456 | None:intergenic | 40.0% | |
| ! | AATCCTCCTTATGAAGGTGT+TGG | + | chr3_2:88539550-88539569 | Msa0435400:intron | 40.0% |
| AACGTTCCAACACCTTCATA+AGG | - | chr3_2:88539559-88539578 | None:intergenic | 40.0% | |
| !! | TTATGAAGGTGTTGGAACGT+TGG | + | chr3_2:88539558-88539577 | Msa0435400:intron | 40.0% |
| TTTAAATCAGACAAACGGGG+AGG | - | chr3_2:88539630-88539649 | None:intergenic | 40.0% | |
| ! | GTATAAGTTGAGACGAAGAG+AGG | - | chr3_2:88539942-88539961 | None:intergenic | 40.0% |
| TTATGTATGTCATGTCCTGG+TGG | + | chr3_2:88539993-88540012 | Msa0435400:intron | 40.0% | |
| !!! | TGAGTTTTGAAGAGTAGCCT+TGG | + | chr3_2:88540121-88540140 | Msa0435400:intron | 40.0% |
| ACTCTGGTTATTTATTGGGC+AGG | + | chr3_2:88540160-88540179 | Msa0435400:intron | 40.0% | |
| TGCACTCTTCAAGAGATGAT+TGG | + | chr3_2:88540311-88540330 | Msa0435400:intron | 40.0% | |
| ! | CAACATAGTTAGAGGTATGC+AGG | + | chr3_2:88540380-88540399 | Msa0435400:intron | 40.0% |
| ! | AGTTAGAGGTATGCAGGTAA+TGG | + | chr3_2:88540386-88540405 | Msa0435400:intron | 40.0% |
| ACTAATGAATGGTCCAAACC+AGG | - | chr3_2:88540657-88540676 | None:intergenic | 40.0% | |
| CAGAGTAGCTGACTAATGAA+TGG | - | chr3_2:88540668-88540687 | None:intergenic | 40.0% | |
| !! | TTGTGGGCTTTGGAAGATTA+AGG | + | chr3_2:88540805-88540824 | Msa0435400:intron | 40.0% |
| !! | AGGCATTGATTTGGTCCATA+TGG | + | chr3_2:88540825-88540844 | Msa0435400:intron | 40.0% |
| !! | TGTCTGGAAGTATCTACTGT+GGG | + | chr3_2:88540865-88540884 | Msa0435400:intron | 40.0% |
| !! | ACTGTGGGTGCTGAAAAAAT+TGG | + | chr3_2:88540880-88540899 | Msa0435400:intron | 40.0% |
| TTTGGCATGTCTTTGTGACT+TGG | + | chr3_2:88540940-88540959 | Msa0435400:intron | 40.0% | |
| !! | CTTTGTGACTTGGACTAGTA+AGG | + | chr3_2:88540950-88540969 | Msa0435400:intron | 40.0% |
| ! | TGGGTCCTGTTTTGTGTTAA+TGG | + | chr3_2:88541013-88541032 | Msa0435400:intron | 40.0% |
| ! | CTCTACTTTGGTGCATTCTA+TGG | + | chr3_2:88541085-88541104 | Msa0435400:intron | 40.0% |
| GCCATCACTATGCATATAAG+AGG | - | chr3_2:88541280-88541299 | None:intergenic | 40.0% | |
| !! | CAAGTGTGTTTCTAGCAACT+AGG | + | chr3_2:88541309-88541328 | Msa0435400:intron | 40.0% |
| ! | CTTGGTTACACCTTTCTAGT+TGG | - | chr3_2:88541345-88541364 | None:intergenic | 40.0% |
| ! | CAACTAGAAAGGTGTAACCA+AGG | + | chr3_2:88541343-88541362 | Msa0435400:intron | 40.0% |
| ATGGTTTCAACTAGCCAGAA+AGG | + | chr3_2:88541380-88541399 | Msa0435400:intron | 40.0% | |
| ! | ATGTTGTCAGGTAGGGTATT+TGG | + | chr3_2:88541496-88541515 | Msa0435400:intron | 40.0% |
| ATGAAGATGGTACCATGCTT+TGG | + | chr3_2:88541629-88541648 | Msa0435400:CDS | 40.0% | |
| !! | GTTCTGAGCATTGGTATTGA+CGG | + | chr3_2:88541791-88541810 | Msa0435400:intron | 40.0% |
| ! | GTATTGACGGATCTTGCAAA+GGG | + | chr3_2:88541804-88541823 | Msa0435400:CDS | 40.0% |
| ! | TATTGACGGATCTTGCAAAG+GGG | + | chr3_2:88541805-88541824 | Msa0435400:CDS | 40.0% |
| GTACAGCTTGGATCATTCTT+CGG | + | chr3_2:88541862-88541881 | Msa0435400:CDS | 40.0% | |
| GTAATTGGAGTCAAACCAAC+TGG | + | chr3_2:88542189-88542208 | Msa0435400:intron | 40.0% | |
| CACCTCAAGTATTCTTGAAG+TGG | - | chr3_2:88542283-88542302 | None:intergenic | 40.0% | |
| TAGCAAAAGGAAGCTTTCAC+TGG | + | chr3_2:88542320-88542339 | Msa0435400:intron | 40.0% | |
| CCAACAGCCTGTTATCATTA+TGG | - | chr3_2:88542355-88542374 | None:intergenic | 40.0% | |
| CCATAATGATAACAGGCTGT+TGG | + | chr3_2:88542352-88542371 | Msa0435400:intron | 40.0% | |
| TCATTTCTTGTTACGCAACC+TGG | - | chr3_2:88542534-88542553 | None:intergenic | 40.0% | |
| TTTACCTTAGGGTACATGTG+TGG | + | chr3_2:88542685-88542704 | Msa0435400:intron | 40.0% | |
| ATCATCAAGAAATGTGGTGG+TGG | - | chr3_2:88542839-88542858 | None:intergenic | 40.0% | |
| TGGATCATCAAGAAATGTGG+TGG | - | chr3_2:88542842-88542861 | None:intergenic | 40.0% | |
| GTCACCTTATTGGCAGAATA+AGG | + | chr3_2:88543151-88543170 | Msa0435400:intron | 40.0% | |
| !! | TTGAAAACATCGACTTACCG+TGG | - | chr3_2:88543229-88543248 | None:intergenic | 40.0% |
| TGGCTAAGAATCAGAGTACG+GGG | + | chr3_2:88537195-88537214 | Msa0435400:CDS | 45.0% | |
| CATCTCCAAAGTGCAATAGC+AGG | - | chr3_2:88537863-88537882 | None:intergenic | 45.0% | |
| ! | CTGCTATTGCACTTTGGAGA+TGG | + | chr3_2:88537861-88537880 | Msa0435400:intron | 45.0% |
| !! | ATCATATGTGGCTTTGTCGG+GGG | + | chr3_2:88538027-88538046 | Msa0435400:CDS | 45.0% |
| TGATAGAACTGGTGAGCTTG+GGG | - | chr3_2:88538118-88538137 | None:intergenic | 45.0% | |
| TTTCTTGTCAGGCATGTGCA+TGG | + | chr3_2:88538598-88538617 | Msa0435400:intron | 45.0% | |
| GAGGATATTGACCCGAGTTT+AGG | - | chr3_2:88538934-88538953 | None:intergenic | 45.0% | |
| GGGGACTGGGTATCAAATAT+GGG | - | chr3_2:88539020-88539039 | None:intergenic | 45.0% | |
| TGGGGACTGGGTATCAAATA+TGG | - | chr3_2:88539021-88539040 | None:intergenic | 45.0% | |
| CCATATAGAGTTTGGGGACT+GGG | - | chr3_2:88539033-88539052 | None:intergenic | 45.0% | |
| AGGGAGCCATATAGAGTTTG+GGG | - | chr3_2:88539039-88539058 | None:intergenic | 45.0% | |
| GAGGGAGCCATATAGAGTTT+GGG | - | chr3_2:88539040-88539059 | None:intergenic | 45.0% | |
| AGAGGGAGCCATATAGAGTT+TGG | - | chr3_2:88539041-88539060 | None:intergenic | 45.0% | |
| AGATTGGAATGCCGAGTTTG+GGG | - | chr3_2:88539087-88539106 | None:intergenic | 45.0% | |
| AATCGCAACTCCCTAACAAC+AGG | - | chr3_2:88539225-88539244 | None:intergenic | 45.0% | |
| TGAGTTTCATGACAGCCCAA+GGG | - | chr3_2:88539374-88539393 | None:intergenic | 45.0% | |
| TTGAGTTTCATGACAGCCCA+AGG | - | chr3_2:88539375-88539394 | None:intergenic | 45.0% | |
| GTTCCAACACCTTCATAAGG+AGG | - | chr3_2:88539556-88539575 | None:intergenic | 45.0% | |
| TGTTTAGCAAGTGTCCAAGC+TGG | - | chr3_2:88539665-88539684 | None:intergenic | 45.0% | |
| ! | GCTTGGACACTTGCTAAACA+CGG | + | chr3_2:88539665-88539684 | Msa0435400:intron | 45.0% |
| ! | GACACTTGCTAAACACGGTT+TGG | + | chr3_2:88539670-88539689 | Msa0435400:intron | 45.0% |
| !! | GCTAAACACGGTTTGGTGTT+TGG | + | chr3_2:88539677-88539696 | Msa0435400:intron | 45.0% |
| CATACAAGGTCGTGTAGGTA+TGG | - | chr3_2:88539902-88539921 | None:intergenic | 45.0% | |
| CATACCTACACGACCTTGTA+TGG | + | chr3_2:88539900-88539919 | Msa0435400:intron | 45.0% | |
| CTATCCATACAAGGTCGTGT+AGG | - | chr3_2:88539907-88539926 | None:intergenic | 45.0% | |
| CTAATACACCATAGACCACC+AGG | - | chr3_2:88540011-88540030 | None:intergenic | 45.0% | |
| ACAGAGAACGTCACAGAATC+TGG | + | chr3_2:88540085-88540104 | Msa0435400:intron | 45.0% | |
| CTGCAGTGTGTTTCATCTGT+AGG | - | chr3_2:88540545-88540564 | None:intergenic | 45.0% | |
| TGAAAGGATAGTACGGTGTG+TGG | + | chr3_2:88540738-88540757 | Msa0435400:intron | 45.0% | |
| GAAAGGATAGTACGGTGTGT+GGG | + | chr3_2:88540739-88540758 | Msa0435400:intron | 45.0% | |
| !! | CTGTCTGGAAGTATCTACTG+TGG | + | chr3_2:88540864-88540883 | Msa0435400:intron | 45.0% |
| TTACCCCTGGGCTGAAAATT+TGG | + | chr3_2:88540922-88540941 | Msa0435400:intron | 45.0% | |
| ! | ATGCCAAATTTTCAGCCCAG+GGG | - | chr3_2:88540928-88540947 | None:intergenic | 45.0% |
| ! | CATGCCAAATTTTCAGCCCA+GGG | - | chr3_2:88540929-88540948 | None:intergenic | 45.0% |
| ! | ACATGCCAAATTTTCAGCCC+AGG | - | chr3_2:88540930-88540949 | None:intergenic | 45.0% |
| CTATGGCCATGAGCTAATCA+TGG | + | chr3_2:88541102-88541121 | Msa0435400:intron | 45.0% | |
| CTATGACAATTGCCACGTTG+TGG | + | chr3_2:88541167-88541186 | Msa0435400:intron | 45.0% | |
| !! | TACACCTTTCTAGTTGGCCA+TGG | - | chr3_2:88541339-88541358 | None:intergenic | 45.0% |
| !! | TGATGTCGTGTCGCTGATTT+GGG | + | chr3_2:88541412-88541431 | Msa0435400:intron | 45.0% |
| AAGATGGTACCATGCTTTGG+TGG | + | chr3_2:88541632-88541651 | Msa0435400:CDS | 45.0% | |
| AGATGGTACCATGCTTTGGT+GGG | + | chr3_2:88541633-88541652 | Msa0435400:CDS | 45.0% | |
| ACAGAACTTACTGGAACTCC+AGG | - | chr3_2:88541670-88541689 | None:intergenic | 45.0% | |
| GTGAAATTCCATTCTGAGCC+AGG | + | chr3_2:88541688-88541707 | Msa0435400:CDS | 45.0% | |
| TGATGACTGATGTCGATACC+TGG | - | chr3_2:88541709-88541728 | None:intergenic | 45.0% | |
| !! | GGTATTGACGGATCTTGCAA+AGG | + | chr3_2:88541803-88541822 | Msa0435400:CDS | 45.0% |
| ! | ATTGACGGATCTTGCAAAGG+GGG | + | chr3_2:88541806-88541825 | Msa0435400:CDS | 45.0% |
| GAGGATTGTGATGTACAGCT+TGG | + | chr3_2:88541850-88541869 | Msa0435400:CDS | 45.0% | |
| TCAGTCTCTCTTTCTCTCTC+TGG | + | chr3_2:88542052-88542071 | Msa0435400:intron | 45.0% | |
| GTATGAAGTCAACGACCAGT+TGG | - | chr3_2:88542207-88542226 | None:intergenic | 45.0% | |
| TTGACCACACATGTACCCTA+AGG | - | chr3_2:88542692-88542711 | None:intergenic | 45.0% | |
| GCATCTCAGGCATCTCAATT+CGG | + | chr3_2:88542738-88542757 | Msa0435400:CDS | 45.0% | |
| ! | GTTGCAGCAATTTTGCCATC+AGG | - | chr3_2:88542764-88542783 | None:intergenic | 45.0% |
| !! | ATCAAGAAATGTGGTGGTGG+TGG | - | chr3_2:88542836-88542855 | None:intergenic | 45.0% |
| ACGGACAGGTATTAAACAGC+GGG | - | chr3_2:88543133-88543152 | None:intergenic | 45.0% | |
| GACGGACAGGTATTAAACAG+CGG | - | chr3_2:88543134-88543153 | None:intergenic | 45.0% | |
| ATACCTGTCCGTCACCTTAT+TGG | + | chr3_2:88543141-88543160 | Msa0435400:intron | 45.0% | |
| !! | CAATTAAATTAATAAATTAT+CGG | - | chr3_2:88543319-88543338 | None:intergenic | 5.0% |
| AGAGTACGGGGTCAAAAGCA+GGG | + | chr3_2:88537207-88537226 | Msa0435400:CDS | 50.0% | |
| ! | TGGTACACTTTTGCCGAGTC+TGG | + | chr3_2:88537757-88537776 | Msa0435400:intron | 50.0% |
| CGTGCTGCATTATGAGTGAG+AGG | + | chr3_2:88538732-88538751 | Msa0435400:intron | 50.0% | |
| CCCAGTCCCCAAACTCTATA+TGG | + | chr3_2:88539030-88539049 | Msa0435400:intron | 50.0% | |
| GCCATATAGAGTTTGGGGAC+TGG | - | chr3_2:88539034-88539053 | None:intergenic | 50.0% | |
| ATTGGAATGCCGAGTTTGGG+GGG | - | chr3_2:88539085-88539104 | None:intergenic | 50.0% | |
| GATTGGAATGCCGAGTTTGG+GGG | - | chr3_2:88539086-88539105 | None:intergenic | 50.0% | |
| TGTATTTGTGCGAGCGTGTG+CGG | + | chr3_2:88539137-88539156 | Msa0435400:intron | 50.0% | |
| TGTCATGTCCTGGTGGTCTA+TGG | + | chr3_2:88540000-88540019 | Msa0435400:intron | 50.0% | |
| AACCTTCCAAATTCTGGGCC+TGG | + | chr3_2:88540636-88540655 | Msa0435400:intron | 50.0% | |
| AACCAGGCCCAGAATTTGGA+AGG | - | chr3_2:88540641-88540660 | None:intergenic | 50.0% | |
| TCCAAATTCTGGGCCTGGTT+TGG | + | chr3_2:88540641-88540660 | Msa0435400:intron | 50.0% | |
| TCCAAACCAGGCCCAGAATT+TGG | - | chr3_2:88540645-88540664 | None:intergenic | 50.0% | |
| GGTACTACGTTTGTGGGCTT+TGG | + | chr3_2:88540795-88540814 | Msa0435400:intron | 50.0% | |
| TTTGTGGTCTGAGTTACCCC+TGG | + | chr3_2:88540909-88540928 | Msa0435400:intron | 50.0% | |
| TTGTGGTCTGAGTTACCCCT+GGG | + | chr3_2:88540910-88540929 | Msa0435400:intron | 50.0% | |
| AGTCTCAGACTCCCTGGAAA+TGG | - | chr3_2:88541057-88541076 | None:intergenic | 50.0% | |
| ! | TTCCAGGGAGTCTGAGACTT+CGG | + | chr3_2:88541058-88541077 | Msa0435400:intron | 50.0% |
| ! | GACTTCGGTGTGCTCTACTT+TGG | + | chr3_2:88541073-88541092 | Msa0435400:intron | 50.0% |
| !! | TCTAGCAACTAGGAGTGCCA+TGG | + | chr3_2:88541319-88541338 | Msa0435400:intron | 50.0% |
| AGTGCCATGGCCAACTAGAA+AGG | + | chr3_2:88541332-88541351 | Msa0435400:intron | 50.0% | |
| CATGAGAAACGCAACACCCT+TGG | - | chr3_2:88541363-88541382 | None:intergenic | 50.0% | |
| !! | CAAGGGTGTTGCGTTTCTCA+TGG | + | chr3_2:88541361-88541380 | Msa0435400:intron | 50.0% |
| CATCACAGGTCACACCTTTC+TGG | - | chr3_2:88541397-88541416 | None:intergenic | 50.0% | |
| AATCAGCGACACGACATCAC+AGG | - | chr3_2:88541411-88541430 | None:intergenic | 50.0% | |
| ! | GTGATGTCGTGTCGCTGATT+TGG | + | chr3_2:88541411-88541430 | Msa0435400:intron | 50.0% |
| CCATGCTTTGGTGGGATGTA+CGG | + | chr3_2:88541641-88541660 | Msa0435400:CDS | 50.0% | |
| TGTCGATACCTGGCTCAGAA+TGG | - | chr3_2:88541699-88541718 | None:intergenic | 50.0% | |
| !! | ATCTTGCAAAGGGGGCATCT+CGG | + | chr3_2:88541814-88541833 | Msa0435400:CDS | 50.0% |
| CTGGCACTTAGTAGCTACTC+TGG | - | chr3_2:88542515-88542534 | None:intergenic | 50.0% | |
| CAGAGTAGCTACTAAGTGCC+AGG | + | chr3_2:88542513-88542532 | Msa0435400:intron | 50.0% | |
| GAAATCACATTGGAGCGACC+TGG | + | chr3_2:88542716-88542735 | Msa0435400:CDS | 50.0% | |
| ATTGAGATGCCTGAGATGCC+AGG | - | chr3_2:88542737-88542756 | None:intergenic | 50.0% | |
| GGCAAAATTGCTGCAACTGC+TGG | + | chr3_2:88542767-88542786 | Msa0435400:CDS | 50.0% | |
| AAATTGCTGCAACTGCTGGC+TGG | + | chr3_2:88542771-88542790 | Msa0435400:CDS | 50.0% | |
| ! | AATTGCTGCAACTGCTGGCT+GGG | + | chr3_2:88542772-88542791 | Msa0435400:CDS | 50.0% |
| ! | TATCCAGCCTTGTGCGAAGT+GGG | - | chr3_2:88543026-88543045 | None:intergenic | 50.0% |
| ! | ATATCCAGCCTTGTGCGAAG+TGG | - | chr3_2:88543027-88543046 | None:intergenic | 50.0% |
| ! | CAGCTAAGGCGTTTCCTTTG+CGG | - | chr3_2:88543188-88543207 | None:intergenic | 50.0% |
| CAGAGTACGGGGTCAAAAGC+AGG | + | chr3_2:88537206-88537225 | Msa0435400:CDS | 55.0% | |
| GAGTACGGGGTCAAAAGCAG+GGG | + | chr3_2:88537208-88537227 | Msa0435400:CDS | 55.0% | |
| GAGGCCCTGCTATTGCACTT+TGG | + | chr3_2:88537855-88537874 | Msa0435400:intron | 55.0% | |
| !! | GGGGAGAACTCTTCTGAGGT+AGG | + | chr3_2:88538046-88538065 | Msa0435400:intron | 55.0% |
| TGACAGCACTGTGGAACCTG+AGG | - | chr3_2:88538304-88538323 | None:intergenic | 55.0% | |
| ! | ATGGGAGTGTGACAGCACTG+TGG | - | chr3_2:88538313-88538332 | None:intergenic | 55.0% |
| GCGGGTGAGTGACAAAGAGA+TGG | - | chr3_2:88538696-88538715 | None:intergenic | 55.0% | |
| AGATCCCAACCCCCCAAACT+CGG | + | chr3_2:88539073-88539092 | Msa0435400:intron | 55.0% | |
| AATGCCGAGTTTGGGGGGTT+GGG | - | chr3_2:88539080-88539099 | None:intergenic | 55.0% | |
| GACAAACGGGGAGGAATGTC+TGG | - | chr3_2:88539621-88539640 | None:intergenic | 55.0% | |
| CCGTACATCCCACCAAAGCA+TGG | - | chr3_2:88541644-88541663 | None:intergenic | 55.0% | |
| TGGTGGGATGTACGGAATCC+TGG | + | chr3_2:88541649-88541668 | Msa0435400:CDS | 55.0% | |
| !! | TCTTGCAAAGGGGGCATCTC+GGG | + | chr3_2:88541815-88541834 | Msa0435400:CDS | 55.0% |
| GGCATCTCAATTCGGCCTGA+TGG | + | chr3_2:88542746-88542765 | Msa0435400:CDS | 55.0% | |
| ! | ATCCAGCCTTGTGCGAAGTG+GGG | - | chr3_2:88543025-88543044 | None:intergenic | 55.0% |
| !! | CTGCCAATAAGGTGACGGAC+AGG | - | chr3_2:88543147-88543166 | None:intergenic | 55.0% |
| ! | CATTGTGTCGGCAGATGCAG+AGG | - | chr3_2:88543407-88543426 | None:intergenic | 55.0% |
| CTCTGCATCTGCCGACACAA+TGG | + | chr3_2:88543405-88543424 | Msa0435400:CDS | 55.0% | |
| TGCATCTGCCGACACAATGG+TGG | + | chr3_2:88543408-88543427 | Msa0435400:CDS | 55.0% | |
| TACGGGGTCAAAAGCAGGGG+AGG | + | chr3_2:88537211-88537230 | Msa0435400:CDS | 60.0% | |
| GTCGGGGGAGAACTCTTCTG+AGG | + | chr3_2:88538042-88538061 | Msa0435400:CDS | 60.0% | |
| GAATGCCGAGTTTGGGGGGT+TGG | - | chr3_2:88539081-88539100 | None:intergenic | 60.0% | |
| CACCGAAGTCTCAGACTCCC+TGG | - | chr3_2:88541063-88541082 | None:intergenic | 60.0% | |
| TCTCGGGAGCTGCAGATGAG+AGG | + | chr3_2:88541831-88541850 | Msa0435400:CDS | 60.0% | |
| TTGGAGCGACCTGGCATCTC+AGG | + | chr3_2:88542725-88542744 | Msa0435400:CDS | 60.0% | |
| CCACAGCGCCACCATTGTGT+CGG | - | chr3_2:88543419-88543438 | None:intergenic | 60.0% | |
| ! | CGACACAATGGTGGCGCTGT+GGG | + | chr3_2:88543417-88543436 | Msa0435400:CDS | 60.0% |
| ! | CAACTGCTGGCTGGGACCAC+AGG | + | chr3_2:88542780-88542799 | Msa0435400:CDS | 65.0% |
| GTGCGAAGTGGGGCAGAGGA+TGG | - | chr3_2:88543015-88543034 | None:intergenic | 65.0% | |
| CCTTGTGCGAAGTGGGGCAG+AGG | - | chr3_2:88543019-88543038 | None:intergenic | 65.0% | |
| CCTCTGCCCCACTTCGCACA+AGG | + | chr3_2:88543016-88543035 | Msa0435400:intron | 65.0% | |
| TGCCCCACTTCGCACAAGGC+TGG | + | chr3_2:88543020-88543039 | Msa0435400:intron | 65.0% | |
| ! | CCGACACAATGGTGGCGCTG+TGG | + | chr3_2:88543416-88543435 | Msa0435400:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_2 | gene | 88537194 | 88543599 | 88537194 | ID=Msa0435400;Name=Msa0435400 |
| chr3_2 | mRNA | 88537194 | 88543599 | 88537194 | ID=Msa0435400-mRNA-1;Parent=Msa0435400;Name=Msa0435400-mRNA-1;_AED=0.20;_eAED=0.20;_QI=0|0.5|0.44|1|1|1|9|137|248 |
| chr3_2 | exon | 88537194 | 88537299 | 88537194 | ID=Msa0435400-mRNA-1:exon:26060;Parent=Msa0435400-mRNA-1 |
| chr3_2 | exon | 88538023 | 88538063 | 88538023 | ID=Msa0435400-mRNA-1:exon:26061;Parent=Msa0435400-mRNA-1 |
| chr3_2 | exon | 88538147 | 88538234 | 88538147 | ID=Msa0435400-mRNA-1:exon:26062;Parent=Msa0435400-mRNA-1 |
| chr3_2 | exon | 88538609 | 88538675 | 88538609 | ID=Msa0435400-mRNA-1:exon:26063;Parent=Msa0435400-mRNA-1 |
| chr3_2 | exon | 88541627 | 88541709 | 88541627 | ID=Msa0435400-mRNA-1:exon:26064;Parent=Msa0435400-mRNA-1 |
| chr3_2 | exon | 88541792 | 88541883 | 88541792 | ID=Msa0435400-mRNA-1:exon:26065;Parent=Msa0435400-mRNA-1 |
| chr3_2 | exon | 88542695 | 88542801 | 88542695 | ID=Msa0435400-mRNA-1:exon:26066;Parent=Msa0435400-mRNA-1 |
| chr3_2 | exon | 88543167 | 88543230 | 88543167 | ID=Msa0435400-mRNA-1:exon:26067;Parent=Msa0435400-mRNA-1 |
| chr3_2 | exon | 88543364 | 88543599 | 88543364 | ID=Msa0435400-mRNA-1:exon:26068;Parent=Msa0435400-mRNA-1 |
| chr3_2 | CDS | 88537194 | 88537299 | 88537194 | ID=Msa0435400-mRNA-1:cds;Parent=Msa0435400-mRNA-1 |
| chr3_2 | CDS | 88538023 | 88538063 | 88538023 | ID=Msa0435400-mRNA-1:cds;Parent=Msa0435400-mRNA-1 |
| chr3_2 | CDS | 88538147 | 88538234 | 88538147 | ID=Msa0435400-mRNA-1:cds;Parent=Msa0435400-mRNA-1 |
| chr3_2 | CDS | 88538609 | 88538675 | 88538609 | ID=Msa0435400-mRNA-1:cds;Parent=Msa0435400-mRNA-1 |
| chr3_2 | CDS | 88541627 | 88541709 | 88541627 | ID=Msa0435400-mRNA-1:cds;Parent=Msa0435400-mRNA-1 |
| chr3_2 | CDS | 88541792 | 88541883 | 88541792 | ID=Msa0435400-mRNA-1:cds;Parent=Msa0435400-mRNA-1 |
| chr3_2 | CDS | 88542695 | 88542801 | 88542695 | ID=Msa0435400-mRNA-1:cds;Parent=Msa0435400-mRNA-1 |
| chr3_2 | CDS | 88543167 | 88543230 | 88543167 | ID=Msa0435400-mRNA-1:cds;Parent=Msa0435400-mRNA-1 |
| chr3_2 | CDS | 88543364 | 88543462 | 88543364 | ID=Msa0435400-mRNA-1:cds;Parent=Msa0435400-mRNA-1 |
| chr3_2 | three_prime_UTR | 88543463 | 88543599 | 88543463 | ID=Msa0435400-mRNA-1:three_prime_utr;Parent=Msa0435400-mRNA-1 |
| Gene Sequence |
| Protein sequence |
