Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1244930 | XP_039684742.1 | 80.000 | 450 | 23 | 4 | 1 | 383 | 16 | 465 | 0.0 | 687 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1244930 | sp|F4KGE8|GIL1_ARATH | 40.000 | 150 | 76 | 6 | 229 | 369 | 411 | 555 | 3.61e-23 | 104 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1244930 | A0A072TQI5 | 80.000 | 450 | 23 | 4 | 1 | 383 | 1 | 450 | 0.0 | 687 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0029850 | Msa1244930 | 0.815123 | 1.086404e-51 | -8.615850e-47 |
| Msa0034480 | Msa1244930 | 0.810817 | 9.544974e-51 | -8.615850e-47 |
| Msa0042550 | Msa1244930 | 0.828488 | 8.744641e-55 | -8.615850e-47 |
| Msa0045550 | Msa1244930 | 0.801942 | 7.097554e-49 | -8.615850e-47 |
| Msa0085720 | Msa1244930 | 0.811447 | 6.970288e-51 | -8.615850e-47 |
| Msa0093520 | Msa1244930 | 0.804489 | 2.108043e-49 | -8.615850e-47 |
| Msa0102120 | Msa1244930 | 0.808365 | 3.210099e-50 | -8.615850e-47 |
| Msa0622600 | Msa1244930 | 0.820263 | 7.522511e-53 | -8.615850e-47 |
| Msa0624230 | Msa1244930 | 0.808302 | 3.311013e-50 | -8.615850e-47 |
| Msa0679550 | Msa1244930 | 0.812456 | 4.200956e-51 | -8.615850e-47 |
| Msa0715410 | Msa1244930 | 0.801565 | 8.479791e-49 | -8.615850e-47 |
| Msa0721340 | Msa1244930 | 0.828643 | 8.021303e-55 | -8.615850e-47 |
| Msa0749440 | Msa1244930 | 0.819947 | 8.886723e-53 | -8.615850e-47 |
| Msa0751850 | Msa1244930 | 0.821496 | 3.914636e-53 | -8.615850e-47 |
| Msa0754920 | Msa1244930 | 0.806160 | 9.412695e-50 | -8.615850e-47 |
| Msa0763890 | Msa1244930 | 0.817270 | 3.597619e-52 | -8.615850e-47 |
| Msa0763920 | Msa1244930 | 0.818716 | 1.694824e-52 | -8.615850e-47 |
| Msa0799330 | Msa1244930 | 0.809096 | 2.240172e-50 | -8.615850e-47 |
| Msa0818110 | Msa1244930 | 0.809738 | 1.631109e-50 | -8.615850e-47 |
| Msa0831850 | Msa1244930 | 0.814303 | 1.650472e-51 | -8.615850e-47 |
| Msa0834320 | Msa1244930 | 0.808546 | 2.937504e-50 | -8.615850e-47 |
| Msa0124550 | Msa1244930 | 0.833098 | 6.482421e-56 | -8.615850e-47 |
| Msa0169820 | Msa1244930 | 0.822211 | 2.674553e-53 | -8.615850e-47 |
| Msa0175050 | Msa1244930 | 0.822489 | 2.304429e-53 | -8.615850e-47 |
| Msa0178510 | Msa1244930 | 0.825362 | 4.886927e-54 | -8.615850e-47 |
| Msa0183010 | Msa1244930 | -0.814654 | 1.380012e-51 | -8.615850e-47 |
| Msa0193540 | Msa1244930 | 0.804359 | 2.243454e-49 | -8.615850e-47 |
| Msa1224580 | Msa1244930 | -0.802631 | 5.120078e-49 | -8.615850e-47 |
| Msa1229610 | Msa1244930 | 0.832462 | 9.325790e-56 | -8.615850e-47 |
| Msa1235400 | Msa1244930 | 0.832270 | 1.040525e-55 | -8.615850e-47 |
| Msa1241800 | Msa1244930 | 0.802292 | 6.012816e-49 | -8.615850e-47 |
| Msa1244200 | Msa1244930 | 0.805291 | 1.432892e-49 | -8.615850e-47 |
| Msa1244930 | Msa1270660 | 0.817431 | 3.309164e-52 | -8.615850e-47 |
| Msa1244930 | Msa1270730 | 0.829325 | 5.483440e-55 | -8.615850e-47 |
| Msa1244930 | Msa1272320 | 0.833552 | 4.993657e-56 | -8.615850e-47 |
| Msa1244930 | Msa1276510 | 0.818553 | 1.846171e-52 | -8.615850e-47 |
| Msa1244930 | Msa1285260 | 0.875834 | 2.253354e-68 | -8.615850e-47 |
| Msa1244930 | Msa1295330 | 0.805195 | 1.501034e-49 | -8.615850e-47 |
| Msa1244930 | Msa1297310 | 0.807723 | 4.396851e-50 | -8.615850e-47 |
| Msa1244930 | Msa1307740 | 0.817063 | 4.004440e-52 | -8.615850e-47 |
| Msa1244930 | Msa1310220 | 0.838818 | 2.293615e-57 | -8.615850e-47 |
| Msa1244930 | Msa1314770 | 0.841782 | 3.855147e-58 | -8.615850e-47 |
| Msa1244930 | Msa1322200 | 0.823315 | 1.479897e-53 | -8.615850e-47 |
| Msa1244930 | Msa1325430 | 0.838145 | 3.420982e-57 | -8.615850e-47 |
| Msa1244930 | Msa1332050 | 0.812712 | 3.693351e-51 | -8.615850e-47 |
| Msa1244930 | Msa1335230 | 0.817004 | 4.129090e-52 | -8.615850e-47 |
| Msa1244930 | Msa1350720 | 0.828345 | 9.466041e-55 | -8.615850e-47 |
| Msa1244930 | Msa1360240 | 0.867629 | 1.188988e-65 | -8.615850e-47 |
| Msa1244930 | Msa1371940 | 0.824788 | 6.676903e-54 | -8.615850e-47 |
| Msa1244930 | Msa1372150 | 0.827993 | 1.151161e-54 | -8.615850e-47 |
| Msa1244930 | Msa1376160 | -0.804923 | 1.711196e-49 | -8.615850e-47 |
| Msa1244930 | Msa1385020 | 0.807187 | 5.712488e-50 | -8.615850e-47 |
| Msa1244930 | Msa1401460 | 0.811789 | 5.873421e-51 | -8.615850e-47 |
| Msa1244930 | Msa1403340 | 0.803111 | 4.074034e-49 | -8.615850e-47 |
| Msa1244930 | Msa1404240 | -0.814475 | 1.511690e-51 | -8.615850e-47 |
| Msa1244930 | Msa1406110 | -0.816001 | 6.924631e-52 | -8.615850e-47 |
| Msa1244930 | Msa1407650 | 0.831297 | 1.807706e-55 | -8.615850e-47 |
| Msa1244930 | Msa1423820 | 0.818636 | 1.768055e-52 | -8.615850e-47 |
| Msa1244930 | Msa1433440 | 0.859106 | 5.200913e-63 | -8.615850e-47 |
| Msa1244930 | Msa1440790 | 0.805914 | 1.060342e-49 | -8.615850e-47 |
| Msa1244930 | Msa1458510 | 0.808510 | 2.988868e-50 | -8.615850e-47 |
| Msa0389810 | Msa1244930 | 0.809055 | 2.286167e-50 | -8.615850e-47 |
| Msa0392040 | Msa1244930 | -0.806760 | 7.033040e-50 | -8.615850e-47 |
| Msa0412840 | Msa1244930 | 0.805726 | 1.161660e-49 | -8.615850e-47 |
| Msa0457510 | Msa1244930 | 0.807318 | 5.360501e-50 | -8.615850e-47 |
| Msa0468130 | Msa1244930 | 0.814862 | 1.240990e-51 | -8.615850e-47 |
| Msa0982270 | Msa1244930 | 0.808609 | 2.847543e-50 | -8.615850e-47 |
| Msa0992600 | Msa1244930 | 0.820314 | 7.325128e-53 | -8.615850e-47 |
| Msa1034280 | Msa1244930 | 0.804997 | 1.651248e-49 | -8.615850e-47 |
| Msa1039710 | Msa1244930 | -0.800051 | 1.727622e-48 | -8.615850e-47 |
| Msa1070840 | Msa1244930 | 0.807383 | 5.193430e-50 | -8.615850e-47 |
| Msa1088710 | Msa1244930 | 0.804984 | 1.661611e-49 | -8.615850e-47 |
| Msa1093480 | Msa1244930 | 0.803532 | 3.332533e-49 | -8.615850e-47 |
| Msa0262370 | Msa1244930 | 0.836612 | 8.451646e-57 | -8.615850e-47 |
| Msa0265150 | Msa1244930 | 0.807059 | 6.081690e-50 | -8.615850e-47 |
| Msa0266240 | Msa1244930 | 0.866869 | 2.080180e-65 | -8.615850e-47 |
| Msa0287700 | Msa1244930 | 0.837338 | 5.512316e-57 | -8.615850e-47 |
| Msa0300150 | Msa1244930 | 0.821223 | 4.524928e-53 | -8.615850e-47 |
| Msa0308460 | Msa1244930 | 0.815630 | 8.380093e-52 | -8.615850e-47 |
| Msa0337590 | Msa1244930 | 0.822635 | 2.132075e-53 | -8.615850e-47 |
| Msa1118760 | Msa1244930 | 0.805517 | 1.285162e-49 | -8.615850e-47 |
| Msa1163590 | Msa1244930 | -0.805045 | 1.613446e-49 | -8.615850e-47 |
| Msa1174310 | Msa1244930 | 0.827049 | 1.938645e-54 | -8.615850e-47 |
| Msa1177780 | Msa1244930 | 0.834634 | 2.676413e-56 | -8.615850e-47 |
| Msa1185460 | Msa1244930 | 0.821256 | 4.448427e-53 | -8.615850e-47 |
| Msa1187590 | Msa1244930 | 0.805984 | 1.025099e-49 | -8.615850e-47 |
| Msa1205390 | Msa1244930 | 0.803907 | 2.786102e-49 | -8.615850e-47 |
| Msa1222280 | Msa1244930 | 0.838934 | 2.141431e-57 | -8.615850e-47 |
| Msa0485490 | Msa1244930 | 0.807007 | 6.236651e-50 | -8.615850e-47 |
| Msa0521740 | Msa1244930 | 0.809879 | 1.521362e-50 | -8.615850e-47 |
| Msa0523910 | Msa1244930 | 0.808964 | 2.391090e-50 | -8.615850e-47 |
| Msa0530650 | Msa1244930 | 0.806747 | 7.078105e-50 | -8.615850e-47 |
| Msa0557410 | Msa1244930 | 0.809849 | 1.543835e-50 | -8.615850e-47 |
| Msa0559500 | Msa1244930 | 0.800671 | 1.291875e-48 | -8.615850e-47 |
| Msa0587190 | Msa1244930 | 0.802008 | 6.877543e-49 | -8.615850e-47 |
| Msa0844110 | Msa1244930 | 0.812809 | 3.517041e-51 | -8.615850e-47 |
| Msa0876360 | Msa1244930 | 0.821142 | 4.725441e-53 | -8.615850e-47 |
| Msa0881160 | Msa1244930 | 0.819016 | 1.448835e-52 | -8.615850e-47 |
| Msa0901320 | Msa1244930 | 0.805937 | 1.048618e-49 | -8.615850e-47 |
| Msa0941540 | Msa1244930 | 0.806781 | 6.964298e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1244930 | MtrunA17_Chr8g0359791 | 78.910 | 422 | 22 | 4 | 29 | 383 | 1 | 422 | 0.0 | 634 |
| Msa1244930 | MtrunA17_Chr2g0315531 | 57.085 | 247 | 74 | 7 | 4 | 229 | 1 | 236 | 2.11e-77 | 246 |
| Msa1244930 | MtrunA17_Chr2g0315531 | 64.671 | 167 | 48 | 4 | 229 | 386 | 303 | 467 | 1.42e-60 | 202 |
| Msa1244930 | MtrunA17_Chr8g0379551 | 32.120 | 467 | 212 | 11 | 1 | 370 | 14 | 472 | 5.39e-59 | 198 |
| Msa1244930 | MtrunA17_Chr4g0011611 | 44.521 | 146 | 78 | 2 | 229 | 372 | 271 | 415 | 8.72e-33 | 127 |
| Msa1244930 | MtrunA17_Chr4g0011611 | 39.205 | 176 | 96 | 4 | 62 | 229 | 36 | 208 | 8.87e-25 | 104 |
| Msa1244930 | MtrunA17_Chr5g0432511 | 29.261 | 352 | 184 | 9 | 75 | 371 | 33 | 374 | 7.14e-31 | 121 |
| Msa1244930 | MtrunA17_Chr7g0230481 | 38.571 | 140 | 82 | 2 | 235 | 372 | 388 | 525 | 1.30e-24 | 105 |
| Msa1244930 | MtrunA17_Chr7g0230481 | 31.395 | 172 | 112 | 3 | 58 | 229 | 139 | 304 | 5.09e-15 | 76.6 |
| Msa1244930 | MtrunA17_Chr3g0103691 | 38.776 | 147 | 79 | 5 | 229 | 369 | 336 | 477 | 1.19e-23 | 102 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1244930 | AT1G53380.2 | 43.172 | 454 | 171 | 8 | 1 | 370 | 1 | 451 | 1.82e-114 | 341 |
| Msa1244930 | AT1G53380.4 | 43.172 | 454 | 171 | 8 | 1 | 370 | 1 | 451 | 1.82e-114 | 341 |
| Msa1244930 | AT1G53380.1 | 43.172 | 454 | 171 | 8 | 1 | 370 | 1 | 451 | 1.82e-114 | 341 |
| Msa1244930 | AT1G53380.3 | 43.172 | 454 | 171 | 8 | 1 | 370 | 1 | 451 | 1.82e-114 | 341 |
| Msa1244930 | AT1G53380.5 | 43.172 | 454 | 171 | 8 | 1 | 370 | 1 | 451 | 1.82e-114 | 341 |
| Msa1244930 | AT1G29300.1 | 36.264 | 455 | 202 | 11 | 1 | 370 | 1 | 452 | 2.20e-77 | 246 |
| Msa1244930 | AT3G14870.4 | 50.397 | 252 | 101 | 8 | 1 | 230 | 1 | 250 | 5.53e-66 | 217 |
| Msa1244930 | AT3G14870.4 | 57.143 | 154 | 57 | 3 | 229 | 374 | 314 | 466 | 7.68e-52 | 180 |
| Msa1244930 | AT3G14870.5 | 50.397 | 252 | 101 | 8 | 1 | 230 | 1 | 250 | 5.53e-66 | 217 |
| Msa1244930 | AT3G14870.5 | 57.143 | 154 | 57 | 3 | 229 | 374 | 314 | 466 | 7.68e-52 | 180 |
| Msa1244930 | AT3G14870.2 | 50.397 | 252 | 101 | 8 | 1 | 230 | 1 | 250 | 5.53e-66 | 217 |
| Msa1244930 | AT3G14870.2 | 57.143 | 154 | 57 | 3 | 229 | 374 | 314 | 466 | 7.68e-52 | 180 |
| Msa1244930 | AT3G14870.3 | 50.397 | 252 | 101 | 8 | 1 | 230 | 2 | 251 | 5.61e-66 | 217 |
| Msa1244930 | AT3G14870.3 | 57.143 | 154 | 57 | 3 | 229 | 374 | 315 | 467 | 7.52e-52 | 180 |
| Msa1244930 | AT3G14870.1 | 50.397 | 252 | 101 | 8 | 1 | 230 | 5 | 254 | 5.77e-66 | 217 |
| Msa1244930 | AT3G14870.1 | 57.143 | 154 | 57 | 3 | 229 | 374 | 318 | 470 | 7.74e-52 | 180 |
| Msa1244930 | AT2G30380.1 | 30.952 | 378 | 187 | 10 | 46 | 371 | 57 | 412 | 6.58e-38 | 141 |
| Msa1244930 | AT2G45260.1 | 46.575 | 146 | 71 | 3 | 229 | 370 | 277 | 419 | 7.68e-34 | 130 |
| Msa1244930 | AT2G45260.1 | 35.795 | 176 | 103 | 3 | 62 | 229 | 37 | 210 | 1.99e-23 | 101 |
| Msa1244930 | AT3G60680.1 | 41.135 | 141 | 77 | 3 | 235 | 370 | 355 | 494 | 2.16e-25 | 107 |
| Msa1244930 | AT3G60680.1 | 30.120 | 166 | 106 | 3 | 63 | 225 | 120 | 278 | 1.39e-14 | 75.5 |
| Msa1244930 | AT2G32130.1 | 44.000 | 125 | 68 | 1 | 63 | 187 | 35 | 157 | 1.07e-24 | 99.4 |
| Msa1244930 | AT4G34080.1 | 36.932 | 176 | 101 | 3 | 62 | 229 | 13 | 186 | 1.55e-24 | 102 |
| Msa1244930 | AT5G58960.2 | 40.000 | 150 | 76 | 6 | 229 | 369 | 336 | 480 | 3.09e-24 | 104 |
| Msa1244930 | AT5G58960.3 | 40.000 | 150 | 76 | 6 | 229 | 369 | 336 | 480 | 3.09e-24 | 104 |
| Msa1244930 | AT5G58960.1 | 40.000 | 150 | 76 | 6 | 229 | 369 | 411 | 555 | 3.67e-24 | 104 |
| Msa1244930 | AT4G33320.1 | 35.052 | 194 | 106 | 5 | 45 | 229 | 5 | 187 | 7.98e-23 | 97.8 |
| Msa1244930 | AT4G36100.1 | 41.935 | 93 | 49 | 2 | 62 | 151 | 13 | 103 | 2.94e-14 | 72.4 |
Find 76 sgRNAs with CRISPR-Local
Find 239 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GAAAGAAACTCTTGGGTTTA+AGG | 0.124364 | 8_2:+34416644 | None:intergenic |
| ACGAAATTTCCTGGGCTAAT+TGG | 0.188145 | 8_2:+34416529 | None:intergenic |
| AAGATGGCAAAAGGTGATTT+TGG | 0.202616 | 8_2:+34413184 | None:intergenic |
| TTCGTCTATTCCTGATTTCT+TGG | 0.212196 | 8_2:-34416108 | Msa1244930:five_prime_UTR |
| AAAGAATGATGCCTCCATTT+TGG | 0.219724 | 8_2:+34413129 | None:intergenic |
| AATTGTTGCCGCCGAATTAA+AGG | 0.248004 | 8_2:-34413731 | Msa1244930:CDS |
| TAAGCTCTTCATCTTCTTCA+TGG | 0.252391 | 8_2:+34413974 | None:intergenic |
| CAAGCTGAAATATTTCAAAT+AGG | 0.264277 | 8_2:-34412986 | Msa1244930:CDS |
| GTTCACTTCATTTGCTGAAA+TGG | 0.292950 | 8_2:-34413056 | Msa1244930:CDS |
| TGGGTTTAAGGGTGAGTTAT+AGG | 0.303144 | 8_2:+34416656 | None:intergenic |
| GAGTTTCTTACGAAATTTCC+TGG | 0.315975 | 8_2:+34416520 | None:intergenic |
| AAAATGGAGGCATCATTCTT+TGG | 0.328174 | 8_2:-34413127 | Msa1244930:CDS |
| AAAGAAACTCTTGGGTTTAA+GGG | 0.339582 | 8_2:+34416645 | None:intergenic |
| GTTGCTTTCACTGTAGTTCC+AGG | 0.358020 | 8_2:-34412878 | Msa1244930:CDS |
| GTTTCTTAAAGAGAAGTTAG+AGG | 0.364153 | 8_2:-34413626 | Msa1244930:CDS |
| AAGCTGAAATATTTCAAATA+GGG | 0.377206 | 8_2:-34412985 | Msa1244930:CDS |
| GAGACTAGTTCACTCCAAAA+TGG | 0.381698 | 8_2:-34413143 | Msa1244930:CDS |
| TTATGACCGTGATGGAATTC+AGG | 0.383293 | 8_2:-34413854 | Msa1244930:CDS |
| GGAATCGAAGTCGCTTCTTA+AGG | 0.390226 | 8_2:-34413662 | Msa1244930:CDS |
| ACTCTTCAGCTCCTTTAATT+CGG | 0.393055 | 8_2:+34413720 | None:intergenic |
| TCGAAGCTTTGTGAAGTTGT+TGG | 0.425314 | 8_2:-34413467 | Msa1244930:CDS |
| GAATTCCATCACGGTCATAA+GGG | 0.426429 | 8_2:+34413857 | None:intergenic |
| TGAATTCCATCACGGTCATA+AGG | 0.426822 | 8_2:+34413856 | None:intergenic |
| CTGAAATGGCTAAGAGGGTA+TGG | 0.458646 | 8_2:-34413042 | Msa1244930:CDS |
| AACTAAGAGAAAGAAACTCT+TGG | 0.461019 | 8_2:+34416636 | None:intergenic |
| GTCTATTCCTGATTTCTTGG+AGG | 0.461566 | 8_2:-34416105 | Msa1244930:intron |
| TTTCCTGGGCTAATTGGAAA+AGG | 0.463107 | 8_2:+34416535 | None:intergenic |
| TGCTGATAAATTAATAATCT+CGG | 0.463917 | 8_2:-34413830 | Msa1244930:CDS |
| ACTAAGAGAAAGAAACTCTT+GGG | 0.467313 | 8_2:+34416637 | None:intergenic |
| GACACCACACAAGAGTAAAC+TGG | 0.474231 | 8_2:-34414091 | Msa1244930:CDS |
| ATACATACCTCCAAGAAATC+AGG | 0.476405 | 8_2:+34416098 | None:intergenic |
| GTGAACAAGTTGTTGTCATC+GGG | 0.477261 | 8_2:+34413073 | None:intergenic |
| ACTGGAGTTGCAGAAGTTGA+TGG | 0.478285 | 8_2:-34414030 | Msa1244930:CDS |
| CATTTGCTGAAATGGCTAAG+AGG | 0.480109 | 8_2:-34413048 | Msa1244930:CDS |
| ACAATTGCTCCCTCCGATGA+AGG | 0.485153 | 8_2:+34413748 | None:intergenic |
| ATAATAACCCATAAAATCGT+GGG | 0.489915 | 8_2:-34413694 | Msa1244930:CDS |
| AAAGCTTCGCAGCAAGCAAA+CGG | 0.495645 | 8_2:-34416598 | Msa1244930:five_prime_UTR |
| TAGCTGAGTTAAAGCAATGT+TGG | 0.501226 | 8_2:-34413795 | Msa1244930:CDS |
| CCCAGTCAATAAAATAACTC+AGG | 0.507210 | 8_2:-34416681 | Msa1244930:five_prime_UTR |
| TAAAATCGTGGGGAAGAAGT+TGG | 0.507397 | 8_2:-34413683 | Msa1244930:CDS |
| CTTGATAATCTACACATCTC+AGG | 0.509716 | 8_2:-34413541 | Msa1244930:CDS |
| ACCCAACAAAAGATGGCAAA+AGG | 0.514310 | 8_2:+34413175 | None:intergenic |
| CAGATTCTCTGATGTATACA+TGG | 0.519514 | 8_2:-34412954 | Msa1244930:CDS |
| GACATGAAACAAAGGAATGT+TGG | 0.529644 | 8_2:-34413103 | Msa1244930:CDS |
| ATTTGAAATATTTCAGCTTG+AGG | 0.530973 | 8_2:+34412989 | None:intergenic |
| ATTCAATTTCGATCCTTCAT+CGG | 0.537880 | 8_2:-34413761 | Msa1244930:CDS |
| ATTTGCTGAAATGGCTAAGA+GGG | 0.540204 | 8_2:-34413047 | Msa1244930:CDS |
| TATAATAACCCATAAAATCG+TGG | 0.541558 | 8_2:-34413695 | Msa1244930:CDS |
| GAAATATTTCAAATAGGGAA+AGG | 0.542615 | 8_2:-34412980 | Msa1244930:CDS |
| CAATTTCGATCCTTCATCGG+AGG | 0.555571 | 8_2:-34413758 | Msa1244930:CDS |
| AGTGAACAAGTTGTTGTCAT+CGG | 0.555601 | 8_2:+34413072 | None:intergenic |
| AGTTTCTTACGAAATTTCCT+GGG | 0.562697 | 8_2:+34416521 | None:intergenic |
| AACAGAACAAGTTAATTGAA+AGG | 0.567554 | 8_2:-34413594 | Msa1244930:CDS |
| GTATTTCACCCAACAAAAGA+TGG | 0.568758 | 8_2:+34413168 | None:intergenic |
| CTTCGTGTAAAATCAATGAC+TGG | 0.569128 | 8_2:-34414048 | Msa1244930:CDS |
| AGAGCAGATATAAAATGTGT+AGG | 0.585231 | 8_2:+34413511 | None:intergenic |
| ACATTGCTTTAACTCAGCTA+AGG | 0.585709 | 8_2:+34413798 | None:intergenic |
| AGTTGTTGGTTTATGAGATG+AGG | 0.591437 | 8_2:-34413453 | Msa1244930:intron |
| CTTCAGCTCCTTTAATTCGG+CGG | 0.592971 | 8_2:+34413723 | None:intergenic |
| AATTTCGATCCTTCATCGGA+GGG | 0.598894 | 8_2:-34413757 | Msa1244930:CDS |
| TCTTAAAGAGAAGTTAGAGG+AGG | 0.599840 | 8_2:-34413623 | Msa1244930:CDS |
| AATTCCATCACGGTCATAAG+GGG | 0.601774 | 8_2:+34413858 | None:intergenic |
| GAAAGGAGGTTAAATCAAAG+TGG | 0.604775 | 8_2:-34413577 | Msa1244930:CDS |
| AGAACAAGTTAATTGAAAGG+AGG | 0.617633 | 8_2:-34413591 | Msa1244930:CDS |
| CCAGTCAATAAAATAACTCA+GGG | 0.619282 | 8_2:-34416680 | Msa1244930:five_prime_UTR |
| GTTAAAATCAGTGAATGCAA+AGG | 0.621096 | 8_2:-34413224 | Msa1244930:CDS |
| GAATCCCCTTATGACCGTGA+TGG | 0.621817 | 8_2:-34413862 | Msa1244930:CDS |
| TATATCTGCTCTTCGCCACG+CGG | 0.626205 | 8_2:-34413500 | Msa1244930:CDS |
| CTTACTTAATACAACACAAG+TGG | 0.640580 | 8_2:-34416573 | Msa1244930:five_prime_UTR |
| CGAGCCAGTTTACTCTTGTG+TGG | 0.650973 | 8_2:+34414087 | None:intergenic |
| TCTTTGGTGACATGAAACAA+AGG | 0.654420 | 8_2:-34413111 | Msa1244930:CDS |
| TAATAACCCATAAAATCGTG+GGG | 0.666198 | 8_2:-34413693 | Msa1244930:CDS |
| CAGCATCCTGAATTCCATCA+CGG | 0.672142 | 8_2:+34413848 | None:intergenic |
| ACTAGTTCACTCCAAAATGG+AGG | 0.674833 | 8_2:-34413140 | Msa1244930:CDS |
| GTGGCTGTAATAACTGTGAG+AGG | 0.692386 | 8_2:+34412816 | None:intergenic |
| TTCGAATTGATTTAACCGCG+TGG | 0.713873 | 8_2:+34413485 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTATTTATATATAAAATAAA+AGG | - | chr8_2:34413897-34413916 | Msa1244930:CDS | 0.0% |
| !!! | AAATTTTTTATATTCTACAA+GGG | - | chr8_2:34413574-34413593 | Msa1244930:CDS | 10.0% |
| !!! | TTTTATACTTTTTTTTTGAG+AGG | + | chr8_2:34412812-34412831 | None:intergenic | 15.0% |
| !! | GAAAAATAATGAATACTAAT+TGG | + | chr8_2:34413203-34413222 | None:intergenic | 15.0% |
| !!! | CAAATTTTTTATATTCTACA+AGG | - | chr8_2:34413573-34413592 | Msa1244930:CDS | 15.0% |
| !!! | AATTGTATTAATGTTTTTTG+AGG | - | chr8_2:34413606-34413625 | Msa1244930:CDS | 15.0% |
| !!! | ATTGTATTAATGTTTTTTGA+GGG | - | chr8_2:34413607-34413626 | Msa1244930:CDS | 15.0% |
| !!! | AAAGATCAAAATATTTTGAA+CGG | - | chr8_2:34414021-34414040 | Msa1244930:CDS | 15.0% |
| !!! | TTTAGGATAAAAAAGATAAT+TGG | + | chr8_2:34414918-34414937 | None:intergenic | 15.0% |
| !!! | TATTTCTACATATTTTATTG+TGG | + | chr8_2:34414960-34414979 | None:intergenic | 15.0% |
| !! | CAATAAAATATGTAGAAATA+AGG | - | chr8_2:34414960-34414979 | Msa1244930:intron | 15.0% |
| !!! | TTAAAGAAAATGTTGTTTAT+AGG | - | chr8_2:34416125-34416144 | Msa1244930:five_prime_UTR | 15.0% |
| !!! | AGAATCATAATCTTTAAAGT+CGG | - | chr8_2:34413124-34413143 | Msa1244930:CDS | 20.0% |
| !!! | ATTATGATGGTGAAATTAAA+AGG | - | chr8_2:34414274-34414293 | Msa1244930:intron | 20.0% |
| !! | ACCAGATTATTTACATATAA+GGG | - | chr8_2:34414369-34414388 | Msa1244930:intron | 20.0% |
| !! | ATTATTTACATATAAGGGAA+GGG | - | chr8_2:34414374-34414393 | Msa1244930:intron | 20.0% |
| !!! | AGTTTCATTGAATTTAGTTT+TGG | - | chr8_2:34414730-34414749 | Msa1244930:intron | 20.0% |
| !! | AATTTCAATCCAAAAAAACA+AGG | + | chr8_2:34414987-34415006 | None:intergenic | 20.0% |
| !! | ATTATAACGAAGAATGAAAA+TGG | + | chr8_2:34415368-34415387 | None:intergenic | 20.0% |
| !! | TGCTGATAAATTAATAATCT+CGG | - | chr8_2:34415685-34415704 | Msa1244930:intron | 20.0% |
| !!! | AATTGTGTTTTGTTTTTATC+AGG | + | chr8_2:34416250-34416269 | None:intergenic | 20.0% |
| !!! | AACAAAACACAATTTTTCTT+TGG | - | chr8_2:34416256-34416275 | Msa1244930:intron | 20.0% |
| !!! | ACAAAACACAATTTTTCTTT+GGG | - | chr8_2:34416257-34416276 | Msa1244930:intron | 20.0% |
| !! | AAGCTGAAATATTTCAAATA+GGG | - | chr8_2:34416530-34416549 | Msa1244930:intron | 20.0% |
| !!! | TATACTTTTTTTTTGAGAGG+AGG | + | chr8_2:34412809-34412828 | None:intergenic | 25.0% |
| !! | GACTTTAAAGATTATGATTC+TGG | + | chr8_2:34413125-34413144 | None:intergenic | 25.0% |
| !!! | GATTTTGATTTTTGTTTTGC+AGG | - | chr8_2:34413349-34413368 | Msa1244930:intron | 25.0% |
| ! | CAAGTTAAATTAATCTCCTT+TGG | - | chr8_2:34413483-34413502 | Msa1244930:CDS | 25.0% |
| ! | TATTATATAGATGAGAGAGA+AGG | - | chr8_2:34413774-34413793 | Msa1244930:CDS | 25.0% |
| ! | TAAATGTTTGTCTTAGTTAG+TGG | - | chr8_2:34413923-34413942 | Msa1244930:CDS | 25.0% |
| !!! | CTTCTTTATAGTTTTAGTAG+TGG | - | chr8_2:34414192-34414211 | Msa1244930:intron | 25.0% |
| !!! | TTTATAGTTTTAGTAGTGGA+TGG | - | chr8_2:34414196-34414215 | Msa1244930:intron | 25.0% |
| !! | TTCTCTCATTGTTATTATGA+TGG | - | chr8_2:34414261-34414280 | Msa1244930:intron | 25.0% |
| ! | GACCAGATTATTTACATATA+AGG | - | chr8_2:34414368-34414387 | Msa1244930:intron | 25.0% |
| ! | TCCCTTATATGTAAATAATC+TGG | + | chr8_2:34414373-34414392 | None:intergenic | 25.0% |
| ! | GATTATTTACATATAAGGGA+AGG | - | chr8_2:34414373-34414392 | Msa1244930:intron | 25.0% |
| ! | TTAATTCAGATATCTGACAA+GGG | + | chr8_2:34414468-34414487 | None:intergenic | 25.0% |
| ! | TTTAATTCAGATATCTGACA+AGG | + | chr8_2:34414469-34414488 | None:intergenic | 25.0% |
| !!! | TGTCAGTAGTATTTTAATCT+TGG | + | chr8_2:34414495-34414514 | None:intergenic | 25.0% |
| ! | ATATCTCAAATGCATGAATA+TGG | + | chr8_2:34414565-34414584 | None:intergenic | 25.0% |
| !! | AAGATTTAAAATCTGCAGTT+CGG | - | chr8_2:34414643-34414662 | Msa1244930:intron | 25.0% |
| ! | AAATTCAATGAAACTACCTT+TGG | + | chr8_2:34414725-34414744 | None:intergenic | 25.0% |
| !! | AACACTATTCCTTTTATGTT+AGG | - | chr8_2:34414757-34414776 | Msa1244930:intron | 25.0% |
| !!! | AGCTTAATTAGTTTGTGTTT+TGG | + | chr8_2:34414854-34414873 | None:intergenic | 25.0% |
| !!! | AAATAAGGACCTTGTTTTTT+TGG | - | chr8_2:34414975-34414994 | Msa1244930:intron | 25.0% |
| !! | TTGTTTAGAAATGTCTTTTG+AGG | - | chr8_2:34415126-34415145 | Msa1244930:intron | 25.0% |
| ! | GCGTTTAAAAAGAATAAGTA+GGG | + | chr8_2:34415326-34415345 | None:intergenic | 25.0% |
| ! | AGCGTTTAAAAAGAATAAGT+AGG | + | chr8_2:34415327-34415346 | None:intergenic | 25.0% |
| ! | CGTTATAATTCTTCAATAGA+TGG | - | chr8_2:34415379-34415398 | Msa1244930:intron | 25.0% |
| ! | TATAATAACCCATAAAATCG+TGG | - | chr8_2:34415820-34415839 | Msa1244930:intron | 25.0% |
| ! | ATAATAACCCATAAAATCGT+GGG | - | chr8_2:34415821-34415840 | Msa1244930:intron | 25.0% |
| ! | AACAGAACAAGTTAATTGAA+AGG | - | chr8_2:34415921-34415940 | Msa1244930:intron | 25.0% |
| ! | CATTGTGATTATCGAAATAA+GGG | + | chr8_2:34416219-34416238 | None:intergenic | 25.0% |
| ! | TCATTGTGATTATCGAAATA+AGG | + | chr8_2:34416220-34416239 | None:intergenic | 25.0% |
| !! | ATTTGAAATATTTCAGCTTG+AGG | + | chr8_2:34416529-34416548 | None:intergenic | 25.0% |
| ! | CAAGCTGAAATATTTCAAAT+AGG | - | chr8_2:34416529-34416548 | Msa1244930:intron | 25.0% |
| ! | GAAATATTTCAAATAGGGAA+AGG | - | chr8_2:34416535-34416554 | Msa1244930:five_prime_UTR | 25.0% |
| !! | CCTGAGTTATTTTATTGACT+GGG | + | chr8_2:34412837-34412856 | None:intergenic | 30.0% |
| CCAGTCAATAAAATAACTCA+GGG | - | chr8_2:34412835-34412854 | Msa1244930:CDS | 30.0% | |
| AAAGAAACTCTTGGGTTTAA+GGG | + | chr8_2:34412873-34412892 | None:intergenic | 30.0% | |
| ACTAAGAGAAAGAAACTCTT+GGG | + | chr8_2:34412881-34412900 | None:intergenic | 30.0% | |
| AACTAAGAGAAAGAAACTCT+TGG | + | chr8_2:34412882-34412901 | None:intergenic | 30.0% | |
| CTTACTTAATACAACACAAG+TGG | - | chr8_2:34412942-34412961 | Msa1244930:CDS | 30.0% | |
| AGTTTCTTACGAAATTTCCT+GGG | + | chr8_2:34412997-34413016 | None:intergenic | 30.0% | |
| !!! | AAGTCGGTGTTTTTTCAAAA+AGG | - | chr8_2:34413140-34413159 | Msa1244930:CDS | 30.0% |
| TGTAAAATAGCAATCAAGCA+AGG | + | chr8_2:34413465-34413484 | None:intergenic | 30.0% | |
| TGATTCATGTATGGATTTCT+TGG | - | chr8_2:34413508-34413527 | Msa1244930:CDS | 30.0% | |
| GATTCATGTATGGATTTCTT+GGG | - | chr8_2:34413509-34413528 | Msa1244930:CDS | 30.0% | |
| AAAAAAAAACTATGTCACCC+AGG | + | chr8_2:34413697-34413716 | None:intergenic | 30.0% | |
| !!! | TTTTAGTAGTGGATGGAAAT+AGG | - | chr8_2:34414203-34414222 | Msa1244930:intron | 30.0% |
| AAATAGGTATCTCTTGTGAT+GGG | - | chr8_2:34414219-34414238 | Msa1244930:intron | 30.0% | |
| GTGAAATTAAAAGGCAATGT+GGG | - | chr8_2:34414283-34414302 | Msa1244930:intron | 30.0% | |
| TTCTGTGATTCATAATCCTT+AGG | + | chr8_2:34414410-34414429 | None:intergenic | 30.0% | |
| ! | TCATGCATTTGAGATATCAA+TGG | - | chr8_2:34414568-34414587 | Msa1244930:intron | 30.0% |
| AAGAGGAATCCTAACATAAA+AGG | + | chr8_2:34414769-34414788 | None:intergenic | 30.0% | |
| ATTCCTCTTTCAAAGGAAAT+GGG | - | chr8_2:34414780-34414799 | Msa1244930:intron | 30.0% | |
| ACCACTTTACAAATAAGTTC+TGG | - | chr8_2:34414875-34414894 | Msa1244930:intron | 30.0% | |
| ACCAGAACTTATTTGTAAAG+TGG | + | chr8_2:34414879-34414898 | None:intergenic | 30.0% | |
| ! | TAAGTTCTGGTTACTTTGAA+TGG | - | chr8_2:34414888-34414907 | Msa1244930:intron | 30.0% |
| ! | CTACATATTTTATTGTGGAC+AGG | + | chr8_2:34414955-34414974 | None:intergenic | 30.0% |
| GCAATTAAGTCATCAAAAGA+CGG | + | chr8_2:34415304-34415323 | None:intergenic | 30.0% | |
| TGAAGAGCTTAAGAAAAAAG+TGG | - | chr8_2:34415553-34415572 | Msa1244930:intron | 30.0% | |
| ATTCAATTTCGATCCTTCAT+CGG | - | chr8_2:34415754-34415773 | Msa1244930:intron | 30.0% | |
| TAATAACCCATAAAATCGTG+GGG | - | chr8_2:34415822-34415841 | Msa1244930:intron | 30.0% | |
| GTTTCTTAAAGAGAAGTTAG+AGG | - | chr8_2:34415889-34415908 | Msa1244930:intron | 30.0% | |
| AGAACAAGTTAATTGAAAGG+AGG | - | chr8_2:34415924-34415943 | Msa1244930:intron | 30.0% | |
| AGAGCAGATATAAAATGTGT+AGG | + | chr8_2:34416007-34416026 | None:intergenic | 30.0% | |
| !! | AATTGAGTCTTTTGTTTGCA+GGG | - | chr8_2:34416171-34416190 | Msa1244930:intron | 30.0% |
| ! | AAACACAATTTTTCTTTGGG+AGG | - | chr8_2:34416260-34416279 | Msa1244930:intron | 30.0% |
| GTTAAAATCAGTGAATGCAA+AGG | - | chr8_2:34416291-34416310 | Msa1244930:intron | 30.0% | |
| ! | GTTTTACCAATCTTAAAACC+TGG | + | chr8_2:34416658-34416677 | None:intergenic | 30.0% |
| CCCAGTCAATAAAATAACTC+AGG | - | chr8_2:34412834-34412853 | Msa1244930:CDS | 35.0% | |
| !! | CCCTGAGTTATTTTATTGAC+TGG | + | chr8_2:34412838-34412857 | None:intergenic | 35.0% |
| GAAAGAAACTCTTGGGTTTA+AGG | + | chr8_2:34412874-34412893 | None:intergenic | 35.0% | |
| GAGTTTCTTACGAAATTTCC+TGG | + | chr8_2:34412998-34413017 | None:intergenic | 35.0% | |
| TTCGTCTATTCCTGATTTCT+TGG | - | chr8_2:34413407-34413426 | Msa1244930:intron | 35.0% | |
| ATACATACCTCCAAGAAATC+AGG | + | chr8_2:34413420-34413439 | None:intergenic | 35.0% | |
| AAATAGCAATCAAGCAAGGA+AGG | + | chr8_2:34413461-34413480 | None:intergenic | 35.0% | |
| CCATACATGAATCAATCCAA+AGG | + | chr8_2:34413502-34413521 | None:intergenic | 35.0% | |
| ! | CCTTTGGATTGATTCATGTA+TGG | - | chr8_2:34413499-34413518 | Msa1244930:CDS | 35.0% |
| TGTATGGATTTCTTGGGTTA+TGG | - | chr8_2:34413515-34413534 | Msa1244930:CDS | 35.0% | |
| AAAGCACAACACAAGACAAT+GGG | + | chr8_2:34413637-34413656 | None:intergenic | 35.0% | |
| TCTTGTGTTGTGCTTTCTTA+AGG | - | chr8_2:34413641-34413660 | Msa1244930:CDS | 35.0% | |
| ACACTAAGATGAGAATCTAC+CGG | + | chr8_2:34413864-34413883 | None:intergenic | 35.0% | |
| ATCATAAAGGGAAAAGGACA+GGG | + | chr8_2:34414102-34414121 | None:intergenic | 35.0% | |
| TGTGTGATCATAAAGGGAAA+AGG | + | chr8_2:34414108-34414127 | None:intergenic | 35.0% | |
| TACCAGTGTGTGATCATAAA+GGG | + | chr8_2:34414114-34414133 | None:intergenic | 35.0% | |
| ATACCAGTGTGTGATCATAA+AGG | + | chr8_2:34414115-34414134 | None:intergenic | 35.0% | |
| GAAATAGGTATCTCTTGTGA+TGG | - | chr8_2:34414218-34414237 | Msa1244930:intron | 35.0% | |
| GGTGAAATTAAAAGGCAATG+TGG | - | chr8_2:34414282-34414301 | Msa1244930:intron | 35.0% | |
| ACAAGGACTCATATCAAAGT+GGG | + | chr8_2:34414323-34414342 | None:intergenic | 35.0% | |
| AACAAGGACTCATATCAAAG+TGG | + | chr8_2:34414324-34414343 | None:intergenic | 35.0% | |
| TGTAAATAATCTGGTCTAGC+AGG | + | chr8_2:34414364-34414383 | None:intergenic | 35.0% | |
| ATGGCAAAATCTTAACTGCA+GGG | + | chr8_2:34414546-34414565 | None:intergenic | 35.0% | |
| TATGGCAAAATCTTAACTGC+AGG | + | chr8_2:34414547-34414566 | None:intergenic | 35.0% | |
| GCTTAATCCAATTTCACCAA+AGG | - | chr8_2:34414706-34414725 | Msa1244930:intron | 35.0% | |
| GAAACTACCTTTGGTGAAAT+TGG | + | chr8_2:34414716-34414735 | None:intergenic | 35.0% | |
| TGTTAGGATTCCTCTTTCAA+AGG | - | chr8_2:34414773-34414792 | Msa1244930:intron | 35.0% | |
| GATTCCTCTTTCAAAGGAAA+TGG | - | chr8_2:34414779-34414798 | Msa1244930:intron | 35.0% | |
| ! | TTCTGGTTACTTTGAATGGT+GGG | - | chr8_2:34414892-34414911 | Msa1244930:intron | 35.0% |
| ! | GCATGTTTAGAAAGCTCTAA+AGG | + | chr8_2:34415106-34415125 | None:intergenic | 35.0% |
| GAAACTCCAACCTCTATTAA+AGG | - | chr8_2:34415199-34415218 | Msa1244930:intron | 35.0% | |
| TACATCAAGGCCTTTAATAG+AGG | + | chr8_2:34415212-34415231 | None:intergenic | 35.0% | |
| ATGCTTTAACGCTTACATCA+AGG | + | chr8_2:34415225-34415244 | None:intergenic | 35.0% | |
| CTTCGTGTAAAATCAATGAC+TGG | - | chr8_2:34415467-34415486 | Msa1244930:intron | 35.0% | |
| TAAGCTCTTCATCTTCTTCA+TGG | + | chr8_2:34415544-34415563 | None:intergenic | 35.0% | |
| ACATTGCTTTAACTCAGCTA+AGG | + | chr8_2:34415720-34415739 | None:intergenic | 35.0% | |
| TAGCTGAGTTAAAGCAATGT+TGG | - | chr8_2:34415720-34415739 | Msa1244930:intron | 35.0% | |
| ACTCTTCAGCTCCTTTAATT+CGG | + | chr8_2:34415798-34415817 | None:intergenic | 35.0% | |
| TCTTAAAGAGAAGTTAGAGG+AGG | - | chr8_2:34415892-34415911 | Msa1244930:intron | 35.0% | |
| GAAAGGAGGTTAAATCAAAG+TGG | - | chr8_2:34415938-34415957 | Msa1244930:intron | 35.0% | |
| ! | CTTGATAATCTACACATCTC+AGG | - | chr8_2:34415974-34415993 | Msa1244930:intron | 35.0% |
| !! | AGTTGTTGGTTTATGAGATG+AGG | - | chr8_2:34416062-34416081 | Msa1244930:intron | 35.0% |
| !! | CAATTGAGTCTTTTGTTTGC+AGG | - | chr8_2:34416170-34416189 | Msa1244930:intron | 35.0% |
| TGTGATTATCGAAATAAGGG+AGG | + | chr8_2:34416216-34416235 | None:intergenic | 35.0% | |
| ! | AAGATGGCAAAAGGTGATTT+TGG | + | chr8_2:34416334-34416353 | None:intergenic | 35.0% |
| ! | ACCTTTTGCCATCTTTTGTT+GGG | - | chr8_2:34416339-34416358 | Msa1244930:intron | 35.0% |
| GTATTTCACCCAACAAAAGA+TGG | + | chr8_2:34416350-34416369 | None:intergenic | 35.0% | |
| ! | AAAGAATGATGCCTCCATTT+TGG | + | chr8_2:34416389-34416408 | None:intergenic | 35.0% |
| !! | AAAATGGAGGCATCATTCTT+TGG | - | chr8_2:34416388-34416407 | Msa1244930:intron | 35.0% |
| ! | TCTTTGGTGACATGAAACAA+AGG | - | chr8_2:34416404-34416423 | Msa1244930:intron | 35.0% |
| GACATGAAACAAAGGAATGT+TGG | - | chr8_2:34416412-34416431 | Msa1244930:intron | 35.0% | |
| AGTGAACAAGTTGTTGTCAT+CGG | + | chr8_2:34416446-34416465 | None:intergenic | 35.0% | |
| ! | GTTCACTTCATTTGCTGAAA+TGG | - | chr8_2:34416459-34416478 | Msa1244930:intron | 35.0% |
| ! | ATTTGCTGAAATGGCTAAGA+GGG | - | chr8_2:34416468-34416487 | Msa1244930:intron | 35.0% |
| CAGATTCTCTGATGTATACA+TGG | - | chr8_2:34416561-34416580 | Msa1244930:five_prime_UTR | 35.0% | |
| !!! | GTAGTTCCAGGTTTTAAGAT+TGG | - | chr8_2:34416649-34416668 | Msa1244930:five_prime_UTR | 35.0% |
| ! | TTTCTTTTCACTTGAGCTTG+TGG | + | chr8_2:34416721-34416740 | None:intergenic | 35.0% |
| TGGGTTTAAGGGTGAGTTAT+AGG | + | chr8_2:34412862-34412881 | None:intergenic | 40.0% | |
| ! | TTTCCTTTTCCAATTAGCCC+AGG | - | chr8_2:34412977-34412996 | Msa1244930:CDS | 40.0% |
| TTTCCTGGGCTAATTGGAAA+AGG | + | chr8_2:34412983-34413002 | None:intergenic | 40.0% | |
| ACGAAATTTCCTGGGCTAAT+TGG | + | chr8_2:34412989-34413008 | None:intergenic | 40.0% | |
| GATAGATAGGCTGAAAAGAG+GGG | + | chr8_2:34413098-34413117 | None:intergenic | 40.0% | |
| CGATAGATAGGCTGAAAAGA+GGG | + | chr8_2:34413099-34413118 | None:intergenic | 40.0% | |
| ! | CCTCTTTTCAGCCTATCTAT+CGG | - | chr8_2:34413097-34413116 | Msa1244930:CDS | 40.0% |
| GAGAAGAGACGATAGAACAA+AGG | + | chr8_2:34413242-34413261 | None:intergenic | 40.0% | |
| GTCTATTCCTGATTTCTTGG+AGG | - | chr8_2:34413410-34413429 | Msa1244930:intron | 40.0% | |
| ! | GAAAGCACAACACAAGACAA+TGG | + | chr8_2:34413638-34413657 | None:intergenic | 40.0% |
| GCTTTCTTAAGGTACATGTC+CGG | - | chr8_2:34413652-34413671 | Msa1244930:CDS | 40.0% | |
| GGATTGATTAAGAGAGATCG+AGG | - | chr8_2:34413795-34413814 | Msa1244930:CDS | 40.0% | |
| AGTGGATGTTGAAATGACTG+TGG | - | chr8_2:34413941-34413960 | Msa1244930:CDS | 40.0% | |
| GATGTTGAAATGACTGTGGT+GGG | - | chr8_2:34413945-34413964 | Msa1244930:CDS | 40.0% | |
| ! | TGTGGTGGGAAAACAGTAAA+TGG | - | chr8_2:34413959-34413978 | Msa1244930:CDS | 40.0% |
| TTGTAGAGAGTCGTTAGTCA+TGG | - | chr8_2:34413997-34414016 | Msa1244930:CDS | 40.0% | |
| GATCATAAAGGGAAAAGGAC+AGG | + | chr8_2:34414103-34414122 | None:intergenic | 40.0% | |
| TTCCCTTTATGATCACACAC+TGG | - | chr8_2:34414109-34414128 | Msa1244930:CDS | 40.0% | |
| TCAAAGTGGGATCATGACAA+AGG | + | chr8_2:34414310-34414329 | None:intergenic | 40.0% | |
| TCCTTGTTGCAGACACATAT+AGG | - | chr8_2:34414336-34414355 | Msa1244930:intron | 40.0% | |
| TGGCAAAATCTTAACTGCAG+GGG | + | chr8_2:34414545-34414564 | None:intergenic | 40.0% | |
| CATGAAAAACTGCTGCATTC+AGG | + | chr8_2:34414683-34414702 | None:intergenic | 40.0% | |
| ! | CTACCCATTTCCTTTGAAAG+AGG | + | chr8_2:34414786-34414805 | None:intergenic | 40.0% |
| ! | GTTCTGGTTACTTTGAATGG+TGG | - | chr8_2:34414891-34414910 | Msa1244930:intron | 40.0% |
| !!! | AGGCTTTTCAGGCTTTGTTT+AGG | + | chr8_2:34414935-34414954 | None:intergenic | 40.0% |
| ! | TTATTGTGGACAGGCTTTTC+AGG | + | chr8_2:34414946-34414965 | None:intergenic | 40.0% |
| CAGTGAAAAGCAAAGCTTCA+AGG | + | chr8_2:34415024-34415043 | None:intergenic | 40.0% | |
| TCAAGGCCTTTAATAGAGGT+TGG | + | chr8_2:34415208-34415227 | None:intergenic | 40.0% | |
| AATTCCATCACGGTCATAAG+GGG | + | chr8_2:34415660-34415679 | None:intergenic | 40.0% | |
| GAATTCCATCACGGTCATAA+GGG | + | chr8_2:34415661-34415680 | None:intergenic | 40.0% | |
| TGAATTCCATCACGGTCATA+AGG | + | chr8_2:34415662-34415681 | None:intergenic | 40.0% | |
| ! | TTATGACCGTGATGGAATTC+AGG | - | chr8_2:34415661-34415680 | Msa1244930:intron | 40.0% |
| AATTTCGATCCTTCATCGGA+GGG | - | chr8_2:34415758-34415777 | Msa1244930:intron | 40.0% | |
| AATTGTTGCCGCCGAATTAA+AGG | - | chr8_2:34415784-34415803 | Msa1244930:intron | 40.0% | |
| ! | CTTCTTCCCCACGATTTTAT+GGG | + | chr8_2:34415831-34415850 | None:intergenic | 40.0% |
| ! | ACTTCTTCCCCACGATTTTA+TGG | + | chr8_2:34415832-34415851 | None:intergenic | 40.0% |
| TAAAATCGTGGGGAAGAAGT+TGG | - | chr8_2:34415832-34415851 | Msa1244930:intron | 40.0% | |
| ! | TTCGAATTGATTTAACCGCG+TGG | + | chr8_2:34416033-34416052 | None:intergenic | 40.0% |
| ! | TCGAAGCTTTGTGAAGTTGT+TGG | - | chr8_2:34416048-34416067 | Msa1244930:intron | 40.0% |
| ! | CACCTTTTGCCATCTTTTGT+TGG | - | chr8_2:34416338-34416357 | Msa1244930:intron | 40.0% |
| ACCCAACAAAAGATGGCAAA+AGG | + | chr8_2:34416343-34416362 | None:intergenic | 40.0% | |
| ! | GAGACTAGTTCACTCCAAAA+TGG | - | chr8_2:34416372-34416391 | Msa1244930:intron | 40.0% |
| ACTAGTTCACTCCAAAATGG+AGG | - | chr8_2:34416375-34416394 | Msa1244930:intron | 40.0% | |
| GTGAACAAGTTGTTGTCATC+GGG | + | chr8_2:34416445-34416464 | None:intergenic | 40.0% | |
| ! | CATTTGCTGAAATGGCTAAG+AGG | - | chr8_2:34416467-34416486 | Msa1244930:intron | 40.0% |
| AAAGCTTCGCAGCAAGCAAA+CGG | - | chr8_2:34412917-34412936 | Msa1244930:CDS | 45.0% | |
| CCGATAGATAGGCTGAAAAG+AGG | + | chr8_2:34413100-34413119 | None:intergenic | 45.0% | |
| !! | TGATTCTGGCTCCGATAGAT+AGG | + | chr8_2:34413111-34413130 | None:intergenic | 45.0% |
| AGCAATCAAGCAAGGAAGGA+AGG | + | chr8_2:34413457-34413476 | None:intergenic | 45.0% | |
| ! | ACCTGGGTGACATAGCTTTT+GGG | + | chr8_2:34413830-34413849 | None:intergenic | 45.0% |
| AGATGAGAATCTACCGGACA+CGG | + | chr8_2:34413858-34413877 | None:intergenic | 45.0% | |
| GGATGTTGAAATGACTGTGG+TGG | - | chr8_2:34413944-34413963 | Msa1244930:CDS | 45.0% | |
| TAAAGGGAAAAGGACAGGGT+TGG | + | chr8_2:34414098-34414117 | None:intergenic | 45.0% | |
| GAGAGAAACTATAACACCCG+AGG | + | chr8_2:34414248-34414267 | None:intergenic | 45.0% | |
| GCCTATATGTGTCTGCAACA+AGG | + | chr8_2:34414340-34414359 | None:intergenic | 45.0% | |
| TACATATAAGGGAAGGGCTC+AGG | - | chr8_2:34414380-34414399 | Msa1244930:intron | 45.0% | |
| ACATATAAGGGAAGGGCTCA+GGG | - | chr8_2:34414381-34414400 | Msa1244930:intron | 45.0% | |
| GACACCACACAAGAGTAAAC+TGG | - | chr8_2:34415424-34415443 | Msa1244930:intron | 45.0% | |
| ACTGGAGTTGCAGAAGTTGA+TGG | - | chr8_2:34415485-34415504 | Msa1244930:intron | 45.0% | |
| CAGCATCCTGAATTCCATCA+CGG | + | chr8_2:34415670-34415689 | None:intergenic | 45.0% | |
| CAATTTCGATCCTTCATCGG+AGG | - | chr8_2:34415757-34415776 | Msa1244930:intron | 45.0% | |
| CTTCAGCTCCTTTAATTCGG+CGG | + | chr8_2:34415795-34415814 | None:intergenic | 45.0% | |
| GGAATCGAAGTCGCTTCTTA+AGG | - | chr8_2:34415853-34415872 | Msa1244930:intron | 45.0% | |
| GTTTATGAGATGAGGTCTGC+TGG | - | chr8_2:34416070-34416089 | Msa1244930:intron | 45.0% | |
| CTGAAATGGCTAAGAGGGTA+TGG | - | chr8_2:34416473-34416492 | Msa1244930:intron | 45.0% | |
| ! | GTTGCTTTCACTGTAGTTCC+AGG | - | chr8_2:34416637-34416656 | Msa1244930:five_prime_UTR | 45.0% |
| GTGGCTGTAATAACTGTGAG+AGG | + | chr8_2:34416702-34416721 | None:intergenic | 45.0% | |
| !! | TTAAAAATAATTTAATCTTA+TGG | + | chr8_2:34413020-34413039 | None:intergenic | 5.0% |
| CACAACACAAGACAATGGGC+TGG | + | chr8_2:34413633-34413652 | None:intergenic | 50.0% | |
| ! | TGTTTTCCAACAGCGGACAC+CGG | + | chr8_2:34413674-34413693 | None:intergenic | 50.0% |
| TCCGCTGTTGGAAAACACCT+GGG | - | chr8_2:34413677-34413696 | Msa1244930:CDS | 50.0% | |
| ! | ACCCAGGTGTTTTCCAACAG+CGG | + | chr8_2:34413681-34413700 | None:intergenic | 50.0% |
| ! | CCTGGGTGACATAGCTTTTG+GGG | + | chr8_2:34413829-34413848 | None:intergenic | 50.0% |
| ! | CACCTGGGTGACATAGCTTT+TGG | + | chr8_2:34413831-34413850 | None:intergenic | 50.0% |
| ! | TCTCTTGTGATGGGATGCCT+CGG | - | chr8_2:34414228-34414247 | Msa1244930:intron | 50.0% |
| !! | GCAGGGGAGCATCTTTAGTT+GGG | + | chr8_2:34414529-34414548 | None:intergenic | 50.0% |
| !! | TGCAGGGGAGCATCTTTAGT+TGG | + | chr8_2:34414530-34414549 | None:intergenic | 50.0% |
| CGAGCCAGTTTACTCTTGTG+TGG | + | chr8_2:34415431-34415450 | None:intergenic | 50.0% | |
| GAATCCCCTTATGACCGTGA+TGG | - | chr8_2:34415653-34415672 | Msa1244930:intron | 50.0% | |
| ACAATTGCTCCCTCCGATGA+AGG | + | chr8_2:34415770-34415789 | None:intergenic | 50.0% | |
| TATATCTGCTCTTCGCCACG+CGG | - | chr8_2:34416015-34416034 | Msa1244930:intron | 50.0% | |
| ATGAGATGAGGTCTGCTGGT+TGG | - | chr8_2:34416074-34416093 | Msa1244930:intron | 50.0% | |
| ! | TGAGATGAGGTCTGCTGGTT+GGG | - | chr8_2:34416075-34416094 | Msa1244930:intron | 50.0% |
| GTCCGCTGTTGGAAAACACC+TGG | - | chr8_2:34413676-34413695 | Msa1244930:CDS | 55.0% | |
| CCCCAAAAGCTATGTCACCC+AGG | - | chr8_2:34413826-34413845 | Msa1244930:CDS | 55.0% | |
| ! | CTCTTGTGATGGGATGCCTC+GGG | - | chr8_2:34414229-34414248 | Msa1244930:intron | 55.0% |
| GAAGGGCTCAGGGAATCCTA+AGG | - | chr8_2:34414391-34414410 | Msa1244930:intron | 55.0% | |
| ACATGTCCGGTGTCCGCTGT+TGG | - | chr8_2:34413665-34413684 | Msa1244930:CDS | 60.0% | |
| ! | ACCCAGGTGCTATCCGTGTC+CGG | - | chr8_2:34413842-34413861 | Msa1244930:CDS | 60.0% |
| ACCGGACACGGATAGCACCT+GGG | + | chr8_2:34413846-34413865 | None:intergenic | 60.0% | |
| TACCGGACACGGATAGCACC+TGG | + | chr8_2:34413847-34413866 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_2 | gene | 34412781 | 34416756 | 34412781 | ID=Msa1244930;Name=Msa1244930 |
| chr8_2 | mRNA | 34412781 | 34416756 | 34412781 | ID=Msa1244930-mRNA-1;Parent=Msa1244930;Name=Msa1244930-mRNA-1;_AED=0.20;_eAED=0.20;_QI=287|0.66|0.5|1|0.66|0.75|4|0|386 |
| chr8_2 | exon | 34412781 | 34413255 | 34412781 | ID=Msa1244930-mRNA-1:exon:10965;Parent=Msa1244930-mRNA-1 |
| chr8_2 | exon | 34413454 | 34414139 | 34413454 | ID=Msa1244930-mRNA-1:exon:10964;Parent=Msa1244930-mRNA-1 |
| chr8_2 | exon | 34416106 | 34416166 | 34416106 | ID=Msa1244930-mRNA-1:exon:10963;Parent=Msa1244930-mRNA-1 |
| chr8_2 | exon | 34416531 | 34416756 | 34416531 | ID=Msa1244930-mRNA-1:exon:10962;Parent=Msa1244930-mRNA-1 |
| chr8_2 | five_prime_UTR | 34416531 | 34416756 | 34416531 | ID=Msa1244930-mRNA-1:five_prime_utr;Parent=Msa1244930-mRNA-1 |
| chr8_2 | five_prime_UTR | 34416106 | 34416166 | 34416106 | ID=Msa1244930-mRNA-1:five_prime_utr;Parent=Msa1244930-mRNA-1 |
| chr8_2 | CDS | 34413454 | 34414139 | 34413454 | ID=Msa1244930-mRNA-1:cds;Parent=Msa1244930-mRNA-1 |
| chr8_2 | CDS | 34412781 | 34413255 | 34412781 | ID=Msa1244930-mRNA-1:cds;Parent=Msa1244930-mRNA-1 |
| Gene Sequence |
| Protein sequence |
