Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0818110 | sp|Q8GV43|PLCD6_ARATH | 53.259 | 629 | 245 | 11 | 2 | 607 | 11 | 613 | 0.0 | 650 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0818110 | G7KH08 | 96.211 | 607 | 23 | 0 | 1 | 607 | 1 | 607 | 0.0 | 1225 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0003300 | Msa0818110 | 0.830802 | 2.392489e-55 | -8.615850e-47 |
| Msa0003560 | Msa0818110 | 0.813265 | 2.794254e-51 | -8.615850e-47 |
| Msa0026450 | Msa0818110 | 0.801846 | 7.425307e-49 | -8.615850e-47 |
| Msa0029850 | Msa0818110 | 0.820658 | 6.106844e-53 | -8.615850e-47 |
| Msa0036920 | Msa0818110 | 0.810219 | 1.285034e-50 | -8.615850e-47 |
| Msa0038720 | Msa0818110 | 0.801166 | 1.023554e-48 | -8.615850e-47 |
| Msa0042550 | Msa0818110 | 0.829255 | 5.701209e-55 | -8.615850e-47 |
| Msa0050930 | Msa0818110 | 0.837590 | 4.751365e-57 | -8.615850e-47 |
| Msa0051460 | Msa0818110 | 0.818641 | 1.762743e-52 | -8.615850e-47 |
| Msa0058270 | Msa0818110 | 0.819446 | 1.156464e-52 | -8.615850e-47 |
| Msa0077180 | Msa0818110 | 0.805172 | 1.517317e-49 | -8.615850e-47 |
| Msa0085720 | Msa0818110 | 0.834136 | 3.569047e-56 | -8.615850e-47 |
| Msa0093520 | Msa0818110 | 0.800244 | 1.578363e-48 | -8.615850e-47 |
| Msa0102120 | Msa0818110 | 0.826117 | 3.234569e-54 | -8.615850e-47 |
| Msa0102750 | Msa0818110 | 0.816664 | 4.921749e-52 | -8.615850e-47 |
| Msa0607540 | Msa0818110 | 0.824789 | 6.672644e-54 | -8.615850e-47 |
| Msa0613460 | Msa0818110 | 0.822516 | 2.272576e-53 | -8.615850e-47 |
| Msa0622600 | Msa0818110 | 0.838688 | 2.477923e-57 | -8.615850e-47 |
| Msa0624230 | Msa0818110 | 0.811076 | 8.390009e-51 | -8.615850e-47 |
| Msa0626990 | Msa0818110 | 0.836243 | 1.048932e-56 | -8.615850e-47 |
| Msa0627350 | Msa0818110 | 0.840799 | 6.995726e-58 | -8.615850e-47 |
| Msa0647830 | Msa0818110 | 0.816037 | 6.797918e-52 | -8.615850e-47 |
| Msa0658570 | Msa0818110 | 0.812734 | 3.651826e-51 | -8.615850e-47 |
| Msa0660300 | Msa0818110 | 0.800417 | 1.455721e-48 | -8.615850e-47 |
| Msa0679550 | Msa0818110 | 0.826410 | 2.755447e-54 | -8.615850e-47 |
| Msa0688070 | Msa0818110 | 0.816472 | 5.432580e-52 | -8.615850e-47 |
| Msa0690440 | Msa0818110 | 0.829697 | 4.452940e-55 | -8.615850e-47 |
| Msa0716750 | Msa0818110 | 0.800791 | 1.221105e-48 | -8.615850e-47 |
| Msa0724560 | Msa0818110 | 0.801614 | 8.284658e-49 | -8.615850e-47 |
| Msa0725450 | Msa0818110 | 0.817130 | 3.868032e-52 | -8.615850e-47 |
| Msa0735160 | Msa0818110 | 0.801257 | 9.805571e-49 | -8.615850e-47 |
| Msa0751210 | Msa0818110 | 0.808417 | 3.129421e-50 | -8.615850e-47 |
| Msa0757080 | Msa0818110 | 0.803597 | 3.231519e-49 | -8.615850e-47 |
| Msa0766090 | Msa0818110 | 0.811105 | 8.269372e-51 | -8.615850e-47 |
| Msa0766630 | Msa0818110 | 0.811679 | 6.205292e-51 | -8.615850e-47 |
| Msa0773310 | Msa0818110 | 0.826083 | 3.296197e-54 | -8.615850e-47 |
| Msa0807030 | Msa0818110 | 0.816601 | 5.083944e-52 | -8.615850e-47 |
| Msa0810760 | Msa0818110 | 0.824071 | 9.843702e-54 | -8.615850e-47 |
| Msa0818110 | Msa0827470 | 0.825618 | 4.248198e-54 | -8.615850e-47 |
| Msa0818110 | Msa0831590 | 0.808036 | 3.771534e-50 | -8.615850e-47 |
| Msa0818110 | Msa0846810 | 0.803278 | 3.763064e-49 | -8.615850e-47 |
| Msa0818110 | Msa0874630 | 0.832660 | 8.326661e-56 | -8.615850e-47 |
| Msa0818110 | Msa0876360 | 0.832450 | 9.387355e-56 | -8.615850e-47 |
| Msa0818110 | Msa0881160 | 0.836331 | 9.964744e-57 | -8.615850e-47 |
| Msa0818110 | Msa0886330 | -0.811146 | 8.100071e-51 | -8.615850e-47 |
| Msa0818110 | Msa0925870 | 0.811273 | 7.601484e-51 | -8.615850e-47 |
| Msa0818110 | Msa0936210 | 0.808704 | 2.717678e-50 | -8.615850e-47 |
| Msa0818110 | Msa0949790 | 0.800664 | 1.295879e-48 | -8.615850e-47 |
| Msa0818110 | Msa0978700 | 0.826528 | 2.582171e-54 | -8.615850e-47 |
| Msa0818110 | Msa0982270 | 0.806567 | 7.724468e-50 | -8.615850e-47 |
| Msa0818110 | Msa1006850 | 0.808189 | 3.499129e-50 | -8.615850e-47 |
| Msa0818110 | Msa1021510 | 0.837083 | 6.408736e-57 | -8.615850e-47 |
| Msa0818110 | Msa1041600 | -0.805747 | 1.149883e-49 | -8.615850e-47 |
| Msa0818110 | Msa1054410 | 0.800260 | 1.566300e-48 | -8.615850e-47 |
| Msa0818110 | Msa1068200 | -0.815318 | 9.832809e-52 | -8.615850e-47 |
| Msa0818110 | Msa1074530 | 0.827056 | 1.931473e-54 | -8.615850e-47 |
| Msa0818110 | Msa1075080 | -0.808471 | 3.047252e-50 | -8.615850e-47 |
| Msa0818110 | Msa1075220 | -0.819509 | 1.118845e-52 | -8.615850e-47 |
| Msa0818110 | Msa1082500 | 0.801203 | 1.006019e-48 | -8.615850e-47 |
| Msa0818110 | Msa1084260 | 0.807562 | 4.758373e-50 | -8.615850e-47 |
| Msa0818110 | Msa1088710 | 0.810793 | 9.657573e-51 | -8.615850e-47 |
| Msa0818110 | Msa1098270 | 0.800061 | 1.719279e-48 | -8.615850e-47 |
| Msa0818110 | Msa1100480 | 0.804084 | 2.559711e-49 | -8.615850e-47 |
| Msa0818110 | Msa1105450 | 0.803452 | 3.462801e-49 | -8.615850e-47 |
| Msa0818110 | Msa1105500 | 0.832339 | 9.999743e-56 | -8.615850e-47 |
| Msa0818110 | Msa1109820 | 0.823440 | 1.383671e-53 | -8.615850e-47 |
| Msa0818110 | Msa1118760 | 0.818915 | 1.528010e-52 | -8.615850e-47 |
| Msa0818110 | Msa1139000 | -0.830601 | 2.678580e-55 | -8.615850e-47 |
| Msa0818110 | Msa1144720 | -0.821814 | 3.305423e-53 | -8.615850e-47 |
| Msa0818110 | Msa1156340 | -0.806880 | 6.634262e-50 | -8.615850e-47 |
| Msa0818110 | Msa1162550 | -0.831523 | 1.590495e-55 | -8.615850e-47 |
| Msa0818110 | Msa1163590 | -0.837889 | 3.982762e-57 | -8.615850e-47 |
| Msa0818110 | Msa1166500 | -0.803480 | 3.417309e-49 | -8.615850e-47 |
| Msa0818110 | Msa1171730 | 0.802092 | 6.610658e-49 | -8.615850e-47 |
| Msa0818110 | Msa1174310 | 0.818796 | 1.625636e-52 | -8.615850e-47 |
| Msa0818110 | Msa1177780 | 0.812817 | 3.501959e-51 | -8.615850e-47 |
| Msa0818110 | Msa1202750 | 0.819223 | 1.299958e-52 | -8.615850e-47 |
| Msa0818110 | Msa1205390 | 0.829017 | 6.512842e-55 | -8.615850e-47 |
| Msa0818110 | Msa1215890 | 0.809057 | 2.284080e-50 | -8.615850e-47 |
| Msa0818110 | Msa1222280 | 0.849369 | 3.380374e-60 | -8.615850e-47 |
| Msa0818110 | Msa1224480 | 0.815413 | 9.362478e-52 | -8.615850e-47 |
| Msa0818110 | Msa1230830 | 0.814772 | 1.299333e-51 | -8.615850e-47 |
| Msa0818110 | Msa1235400 | 0.832382 | 9.758522e-56 | -8.615850e-47 |
| Msa0818110 | Msa1239720 | 0.809911 | 1.497573e-50 | -8.615850e-47 |
| Msa0818110 | Msa1243100 | 0.811756 | 5.971491e-51 | -8.615850e-47 |
| Msa0818110 | Msa1244200 | 0.812937 | 3.296851e-51 | -8.615850e-47 |
| Msa0818110 | Msa1244930 | 0.809738 | 1.631109e-50 | -8.615850e-47 |
| Msa0818110 | Msa1247030 | 0.827261 | 1.725065e-54 | -8.615850e-47 |
| Msa0818110 | Msa1250310 | 0.818111 | 2.324335e-52 | -8.615850e-47 |
| Msa0818110 | Msa1262990 | -0.801647 | 8.158975e-49 | -8.615850e-47 |
| Msa0818110 | Msa1264860 | -0.855588 | 5.703939e-62 | -8.615850e-47 |
| Msa0818110 | Msa1267610 | 0.836969 | 6.850675e-57 | -8.615850e-47 |
| Msa0818110 | Msa1276510 | 0.804433 | 2.165233e-49 | -8.615850e-47 |
| Msa0818110 | Msa1288340 | 0.814675 | 1.365059e-51 | -8.615850e-47 |
| Msa0818110 | Msa1295510 | 0.802005 | 6.888313e-49 | -8.615850e-47 |
| Msa0818110 | Msa1297310 | 0.834834 | 2.382598e-56 | -8.615850e-47 |
| Msa0818110 | Msa1306750 | 0.806414 | 8.321130e-50 | -8.615850e-47 |
| Msa0818110 | Msa1307740 | 0.809789 | 1.590795e-50 | -8.615850e-47 |
| Msa0818110 | Msa1310220 | 0.805549 | 1.265204e-49 | -8.615850e-47 |
| Msa0818110 | Msa1311340 | 0.807806 | 4.222264e-50 | -8.615850e-47 |
| Msa0818110 | Msa1314770 | 0.833853 | 4.199969e-56 | -8.615850e-47 |
| Msa0818110 | Msa1333730 | 0.800470 | 1.420044e-48 | -8.615850e-47 |
| Msa0818110 | Msa1372150 | 0.823642 | 1.240720e-53 | -8.615850e-47 |
| Msa0818110 | Msa1373350 | 0.820974 | 5.165552e-53 | -8.615850e-47 |
| Msa0818110 | Msa1376160 | -0.839183 | 1.844889e-57 | -8.615850e-47 |
| Msa0818110 | Msa1376890 | 0.814436 | 1.542269e-51 | -8.615850e-47 |
| Msa0818110 | Msa1376930 | 0.803847 | 2.866612e-49 | -8.615850e-47 |
| Msa0818110 | Msa1377070 | 0.802094 | 6.602799e-49 | -8.615850e-47 |
| Msa0818110 | Msa1378230 | 0.813722 | 2.216860e-51 | -8.615850e-47 |
| Msa0818110 | Msa1379850 | 0.805885 | 1.075336e-49 | -8.615850e-47 |
| Msa0818110 | Msa1384330 | 0.802821 | 4.677109e-49 | -8.615850e-47 |
| Msa0818110 | Msa1385020 | 0.835180 | 1.950164e-56 | -8.615850e-47 |
| Msa0818110 | Msa1390120 | 0.803568 | 3.276059e-49 | -8.615850e-47 |
| Msa0818110 | Msa1395530 | 0.803269 | 3.777944e-49 | -8.615850e-47 |
| Msa0818110 | Msa1397260 | 0.850952 | 1.217110e-60 | -8.615850e-47 |
| Msa0818110 | Msa1401140 | 0.849176 | 3.825023e-60 | -8.615850e-47 |
| Msa0818110 | Msa1404240 | -0.803614 | 3.204337e-49 | -8.615850e-47 |
| Msa0818110 | Msa1404670 | 0.824067 | 9.865208e-54 | -8.615850e-47 |
| Msa0818110 | Msa1407650 | 0.866962 | 1.941608e-65 | -8.615850e-47 |
| Msa0818110 | Msa1435400 | 0.831933 | 1.260622e-55 | -8.615850e-47 |
| Msa0818110 | Msa1440940 | 0.823371 | 1.436230e-53 | -8.615850e-47 |
| Msa0818110 | Msa1451620 | -0.834654 | 2.644633e-56 | -8.615850e-47 |
| Msa0818110 | Msa1455390 | 0.822056 | 2.905531e-53 | -8.615850e-47 |
| Msa0818110 | Msa1458510 | 0.809414 | 1.914404e-50 | -8.615850e-47 |
| Msa0818110 | Msa1458550 | 0.831097 | 2.024698e-55 | -8.615850e-47 |
| Msa0818110 | Msa1459050 | 0.842885 | 1.967336e-58 | -8.615850e-47 |
| Msa0818110 | Msa1461810 | -0.808900 | 2.466831e-50 | -8.615850e-47 |
| Msa0818110 | Msa1463650 | -0.832514 | 9.049300e-56 | -8.615850e-47 |
| Msa0124550 | Msa0818110 | 0.829178 | 5.952383e-55 | -8.615850e-47 |
| Msa0130520 | Msa0818110 | 0.813841 | 2.086333e-51 | -8.615850e-47 |
| Msa0130970 | Msa0818110 | 0.808217 | 3.452715e-50 | -8.615850e-47 |
| Msa0143920 | Msa0818110 | 0.803596 | 3.233383e-49 | -8.615850e-47 |
| Msa0145260 | Msa0818110 | 0.802754 | 4.829392e-49 | -8.615850e-47 |
| Msa0169820 | Msa0818110 | 0.840728 | 7.302760e-58 | -8.615850e-47 |
| Msa0175050 | Msa0818110 | 0.822093 | 2.849046e-53 | -8.615850e-47 |
| Msa0178510 | Msa0818110 | 0.827659 | 1.384888e-54 | -8.615850e-47 |
| Msa0183010 | Msa0818110 | -0.822630 | 2.137376e-53 | -8.615850e-47 |
| Msa0187060 | Msa0818110 | 0.800608 | 1.330647e-48 | -8.615850e-47 |
| Msa0199800 | Msa0818110 | -0.805649 | 1.205816e-49 | -8.615850e-47 |
| Msa0210450 | Msa0818110 | 0.809646 | 1.706830e-50 | -8.615850e-47 |
| Msa0230640 | Msa0818110 | -0.809088 | 2.248889e-50 | -8.615850e-47 |
| Msa0234440 | Msa0818110 | 0.837503 | 5.001500e-57 | -8.615850e-47 |
| Msa0365490 | Msa0818110 | 0.850956 | 1.214045e-60 | -8.615850e-47 |
| Msa0381600 | Msa0818110 | -0.828832 | 7.221057e-55 | -8.615850e-47 |
| Msa0388030 | Msa0818110 | -0.830274 | 3.220933e-55 | -8.615850e-47 |
| Msa0389320 | Msa0818110 | 0.801462 | 8.904127e-49 | -8.615850e-47 |
| Msa0389810 | Msa0818110 | 0.814959 | 1.181311e-51 | -8.615850e-47 |
| Msa0392040 | Msa0818110 | -0.821862 | 3.222182e-53 | -8.615850e-47 |
| Msa0409200 | Msa0818110 | 0.824450 | 8.019162e-54 | -8.615850e-47 |
| Msa0433410 | Msa0818110 | -0.809497 | 1.837346e-50 | -8.615850e-47 |
| Msa0436370 | Msa0818110 | 0.805165 | 1.522854e-49 | -8.615850e-47 |
| Msa0438050 | Msa0818110 | 0.825412 | 4.753722e-54 | -8.615850e-47 |
| Msa0458440 | Msa0818110 | 0.842369 | 2.696482e-58 | -8.615850e-47 |
| Msa0468130 | Msa0818110 | 0.804476 | 2.121013e-49 | -8.615850e-47 |
| Msa0469940 | Msa0818110 | -0.824231 | 9.029337e-54 | -8.615850e-47 |
| Msa0480600 | Msa0818110 | 0.825239 | 5.225106e-54 | -8.615850e-47 |
| Msa0266240 | Msa0818110 | 0.813776 | 2.156529e-51 | -8.615850e-47 |
| Msa0272730 | Msa0818110 | 0.840864 | 6.727072e-58 | -8.615850e-47 |
| Msa0278900 | Msa0818110 | 0.801053 | 1.079669e-48 | -8.615850e-47 |
| Msa0281640 | Msa0818110 | 0.800308 | 1.531559e-48 | -8.615850e-47 |
| Msa0285450 | Msa0818110 | 0.820667 | 6.078428e-53 | -8.615850e-47 |
| Msa0305190 | Msa0818110 | 0.800004 | 1.766236e-48 | -8.615850e-47 |
| Msa0313270 | Msa0818110 | 0.803011 | 4.272420e-49 | -8.615850e-47 |
| Msa0342070 | Msa0818110 | 0.829769 | 4.277103e-55 | -8.615850e-47 |
| Msa0344690 | Msa0818110 | -0.820887 | 5.408991e-53 | -8.615850e-47 |
| Msa0347650 | Msa0818110 | 0.814980 | 1.168538e-51 | -8.615850e-47 |
| Msa0350000 | Msa0818110 | 0.802820 | 4.680214e-49 | -8.615850e-47 |
| Msa0354800 | Msa0818110 | -0.805851 | 1.093179e-49 | -8.615850e-47 |
| Msa0491500 | Msa0818110 | 0.819688 | 1.018318e-52 | -8.615850e-47 |
| Msa0491520 | Msa0818110 | 0.814975 | 1.171519e-51 | -8.615850e-47 |
| Msa0521620 | Msa0818110 | 0.802842 | 4.629639e-49 | -8.615850e-47 |
| Msa0525610 | Msa0818110 | 0.806638 | 7.465564e-50 | -8.615850e-47 |
| Msa0530650 | Msa0818110 | 0.843216 | 1.606216e-58 | -8.615850e-47 |
| Msa0532810 | Msa0818110 | -0.811785 | 5.885437e-51 | -8.615850e-47 |
| Msa0553460 | Msa0818110 | 0.823799 | 1.140524e-53 | -8.615850e-47 |
| Msa0555720 | Msa0818110 | 0.813773 | 2.159859e-51 | -8.615850e-47 |
| Msa0567020 | Msa0818110 | 0.801758 | 7.741348e-49 | -8.615850e-47 |
| Msa0572480 | Msa0818110 | 0.807232 | 5.590158e-50 | -8.615850e-47 |
| Msa0574850 | Msa0818110 | 0.836327 | 9.986814e-57 | -8.615850e-47 |
| Msa0580000 | Msa0818110 | 0.827495 | 1.515594e-54 | -8.615850e-47 |
| Msa0587190 | Msa0818110 | 0.833956 | 3.958405e-56 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0818110 | MtrunA17_Chr5g0437041 | 96.211 | 607 | 23 | 0 | 1 | 607 | 1 | 607 | 0.0 | 1225 |
| Msa0818110 | MtrunA17_Chr3g0113521 | 58.725 | 596 | 226 | 10 | 14 | 607 | 10 | 587 | 0.0 | 676 |
| Msa0818110 | MtrunA17_Chr3g0113471 | 59.235 | 601 | 221 | 11 | 12 | 607 | 7 | 588 | 0.0 | 668 |
| Msa0818110 | MtrunA17_Chr5g0430181 | 54.000 | 600 | 262 | 6 | 11 | 606 | 4 | 593 | 0.0 | 654 |
| Msa0818110 | MtrunA17_Chr5g0437061 | 62.376 | 505 | 155 | 6 | 123 | 606 | 1 | 491 | 0.0 | 629 |
| Msa0818110 | MtrunA17_Chr5g0437081 | 50.749 | 601 | 273 | 9 | 11 | 606 | 6 | 588 | 0.0 | 598 |
| Msa0818110 | MtrunA17_Chr3g0113531 | 51.429 | 595 | 262 | 8 | 19 | 606 | 18 | 592 | 0.0 | 576 |
| Msa0818110 | MtrunA17_Chr3g0112551 | 51.684 | 594 | 253 | 9 | 19 | 606 | 6 | 571 | 0.0 | 574 |
| Msa0818110 | MtrunA17_Chr5g0430191 | 45.151 | 598 | 281 | 10 | 11 | 606 | 20 | 572 | 3.60e-173 | 504 |
| Msa0818110 | MtrunA17_Chr5g0437051 | 38.393 | 112 | 64 | 2 | 8 | 119 | 2 | 108 | 8.75e-19 | 82.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0818110 | AT2G40116.1 | 53.259 | 629 | 245 | 11 | 2 | 607 | 11 | 613 | 0.0 | 650 |
| Msa0818110 | AT5G58700.3 | 51.661 | 602 | 270 | 8 | 11 | 606 | 10 | 596 | 0.0 | 612 |
| Msa0818110 | AT5G58700.1 | 51.661 | 602 | 270 | 8 | 11 | 606 | 10 | 596 | 0.0 | 612 |
| Msa0818110 | AT5G58690.3 | 50.083 | 601 | 264 | 6 | 11 | 606 | 8 | 577 | 0.0 | 594 |
| Msa0818110 | AT5G58690.1 | 50.083 | 601 | 264 | 6 | 11 | 606 | 8 | 577 | 0.0 | 594 |
| Msa0818110 | AT5G58690.2 | 50.940 | 585 | 251 | 6 | 27 | 606 | 5 | 558 | 0.0 | 591 |
| Msa0818110 | AT3G08510.2 | 50.167 | 598 | 273 | 9 | 11 | 606 | 6 | 580 | 0.0 | 589 |
| Msa0818110 | AT3G08510.1 | 50.167 | 598 | 273 | 9 | 11 | 606 | 6 | 580 | 0.0 | 589 |
| Msa0818110 | AT3G55940.1 | 50.083 | 603 | 269 | 11 | 11 | 606 | 6 | 583 | 0.0 | 576 |
| Msa0818110 | AT5G58700.2 | 55.061 | 494 | 207 | 6 | 119 | 606 | 4 | 488 | 0.0 | 539 |
| Msa0818110 | AT3G08510.4 | 46.990 | 598 | 263 | 10 | 11 | 606 | 6 | 551 | 0.0 | 528 |
| Msa0818110 | AT3G08510.3 | 46.990 | 598 | 263 | 10 | 11 | 606 | 6 | 551 | 0.0 | 528 |
| Msa0818110 | AT5G58670.1 | 44.776 | 603 | 279 | 12 | 11 | 607 | 5 | 559 | 5.56e-174 | 506 |
| Msa0818110 | AT4G38530.1 | 43.664 | 584 | 278 | 12 | 28 | 607 | 22 | 558 | 1.06e-161 | 474 |
| Msa0818110 | AT3G47290.1 | 38.462 | 572 | 283 | 14 | 38 | 606 | 25 | 530 | 1.83e-116 | 357 |
| Msa0818110 | AT3G47290.2 | 38.256 | 562 | 278 | 14 | 38 | 596 | 25 | 520 | 6.08e-112 | 347 |
| Msa0818110 | AT3G47220.1 | 37.968 | 561 | 265 | 16 | 55 | 606 | 44 | 530 | 5.91e-109 | 338 |
Find 108 sgRNAs with CRISPR-Local
Find 209 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TACCCTTAAGTTTCTTATTT+TGG | 0.118300 | 5_3:-53568859 | None:intergenic |
| CGAGGAGAATTTCACGTTAT+TGG | 0.170735 | 5_3:+53567547 | Msa0818110:CDS |
| GTGTTATAGAACTTGATTTA+TGG | 0.172616 | 5_3:+53568015 | Msa0818110:CDS |
| GGTTTCTGCATTAGAATTTC+AGG | 0.209969 | 5_3:-53569818 | None:intergenic |
| TTGGAGTCTATCAAGAAATA+TGG | 0.288156 | 5_3:+53568208 | Msa0818110:CDS |
| GGACACAATTCCTTCCTTAC+TGG | 0.299080 | 5_3:+53567930 | Msa0818110:CDS |
| CAGATGGCAACTCAAATATT+TGG | 0.332400 | 5_3:+53568397 | Msa0818110:intron |
| TGTTGCAGCGCCTTTATGAT+TGG | 0.348377 | 5_3:-53567984 | None:intergenic |
| TTCACTGGCATAATCCTTGT+AGG | 0.368179 | 5_3:-53569863 | None:intergenic |
| TCACATTATTTCATATATAC+AGG | 0.373381 | 5_3:+53567909 | Msa0818110:CDS |
| GAGGGAGACGCGGGTTCATA+TGG | 0.374246 | 5_3:+53568779 | Msa0818110:CDS |
| AATCCAAAATAAGAAACTTA+AGG | 0.376008 | 5_3:+53568856 | Msa0818110:CDS |
| CAAAAGTAATCATGGACAAT+TGG | 0.378453 | 5_3:+53570673 | Msa0818110:CDS |
| GGCAACTATCATGCTCTAGA+TGG | 0.380322 | 5_3:+53568559 | Msa0818110:CDS |
| TGTATCACCTATCAAATGTT+TGG | 0.381688 | 5_3:+53568189 | Msa0818110:CDS |
| CCAATTTCAGAGATAAAACT+TGG | 0.383327 | 5_3:+53570819 | Msa0818110:CDS |
| CCACATCTTGGTTGGATGTA+TGG | 0.385766 | 5_3:+53569145 | Msa0818110:CDS |
| TCCACTTCAATTGTAGAATC+TGG | 0.391302 | 5_3:-53568625 | None:intergenic |
| TTACGACAGGTTGGTATTGT+TGG | 0.393338 | 5_3:+53570621 | Msa0818110:intron |
| ATAGACTCCAAACATTTGAT+AGG | 0.395008 | 5_3:-53568196 | None:intergenic |
| ACAAATTTCAAGCCACATCT+TGG | 0.397778 | 5_3:+53569133 | Msa0818110:CDS |
| TTCTTCCTTGCAATGTCAGC+AGG | 0.404340 | 5_3:-53570648 | None:intergenic |
| AATCTGTAAAGTTGCTAATG+AGG | 0.409885 | 5_3:+53570886 | Msa0818110:CDS |
| ATCCAAAATAAGAAACTTAA+GGG | 0.420003 | 5_3:+53568857 | Msa0818110:CDS |
| TGCTTAGTTGATTTCCAGTA+AGG | 0.430931 | 5_3:-53567944 | None:intergenic |
| AAACATTTGATAGGTGATAC+AGG | 0.433878 | 5_3:-53568187 | None:intergenic |
| CTCATGGAACAGACATCATT+AGG | 0.435189 | 5_3:+53568963 | Msa0818110:CDS |
| ATATCTTCTTTACTAGAAGT+TGG | 0.441522 | 5_3:-53568038 | None:intergenic |
| AGTCCCTTTATATAATGAAA+AGG | 0.442307 | 5_3:+53570851 | Msa0818110:CDS |
| CAAGGAATGTTCAGAGCAAA+TGG | 0.442876 | 5_3:+53569773 | Msa0818110:CDS |
| GGAGGAAAAGATGACTTTGC+TGG | 0.448423 | 5_3:+53570783 | Msa0818110:CDS |
| AGGTTGTTTCGCTCCAACTT+AGG | 0.451502 | 5_3:-53568922 | None:intergenic |
| CTGACCTTTGTGTAAAAGTC+TGG | 0.458406 | 5_3:-53570059 | None:intergenic |
| CTTAAACATTCTGCTGGTTG+AGG | 0.462468 | 5_3:-53568436 | None:intergenic |
| GAAGAAAACAAAAGTAATCA+TGG | 0.462747 | 5_3:+53570665 | Msa0818110:CDS |
| TTGGACTTAAAACGTTCTTT+CGG | 0.467487 | 5_3:-53568520 | None:intergenic |
| AAAGTACAAGGTGACTGAAC+TGG | 0.469738 | 5_3:+53567424 | Msa0818110:CDS |
| GAAGATATTAAAGTTGATCA+TGG | 0.470581 | 5_3:+53568053 | Msa0818110:CDS |
| GCCGTTGTCCTTGATCCGGT+TGG | 0.472915 | 5_3:-53568539 | None:intergenic |
| ATCTGAAGTAAAGCAAGCTC+TGG | 0.475991 | 5_3:-53570738 | None:intergenic |
| GATGGTTGCATTCAATATGC+AGG | 0.480468 | 5_3:+53569174 | Msa0818110:CDS |
| GTTAAACTTAAACATTCTGC+TGG | 0.482099 | 5_3:-53568442 | None:intergenic |
| AAAATCTCCTTGAGGTCCTC+AGG | 0.484345 | 5_3:-53567452 | None:intergenic |
| CAGTGAAGAACCAATCATAA+AGG | 0.485723 | 5_3:+53567974 | Msa0818110:CDS |
| GTCCCTTTATATAATGAAAA+GGG | 0.487512 | 5_3:+53570852 | Msa0818110:CDS |
| ATTTCAAGCCACATCTTGGT+TGG | 0.488655 | 5_3:+53569137 | Msa0818110:CDS |
| ATATACTTAGGGTGTACCCT+AGG | 0.488798 | 5_3:+53569092 | Msa0818110:CDS |
| GAGCGAAACAACCTTAGAAA+AGG | 0.490928 | 5_3:+53568931 | Msa0818110:CDS |
| TTTAACAGAATTTCCTTCAC+CGG | 0.497230 | 5_3:+53568459 | Msa0818110:CDS |
| CGGTTTCTTGTGGAGCATCA+AGG | 0.501212 | 5_3:+53567524 | Msa0818110:CDS |
| GTGAACTTAGACGCCTAAGT+TGG | 0.503997 | 5_3:+53568909 | Msa0818110:CDS |
| GCAAGCTCTGGAACAGTCAA+AGG | 0.505738 | 5_3:-53570726 | None:intergenic |
| TCTTCTATAGTTATGATCAC+TGG | 0.505821 | 5_3:-53568250 | None:intergenic |
| GCAATTACATCGGTTTCTTG+TGG | 0.510508 | 5_3:+53567514 | Msa0818110:CDS |
| AGTTGCCGTTGTCCTTGATC+CGG | 0.511054 | 5_3:-53568543 | None:intergenic |
| GAAAAGGCTTCAGAATCTCA+TGG | 0.512234 | 5_3:+53568947 | Msa0818110:CDS |
| AAGGAGCATTGAAATCATCT+AGG | 0.512950 | 5_3:-53567688 | None:intergenic |
| AAGATGTGGCTTGAAATTTG+TGG | 0.522605 | 5_3:-53569131 | None:intergenic |
| TCAAACTCATTGTCACATTG+AGG | 0.525560 | 5_3:-53569839 | None:intergenic |
| ATCATCAGAAGAAGAATCAT+CGG | 0.530210 | 5_3:+53568591 | Msa0818110:CDS |
| CAAGTAAAAGACAAAGATCA+AGG | 0.532668 | 5_3:+53570762 | Msa0818110:CDS |
| GCAGCTGAGAAGGATACATC+AGG | 0.533113 | 5_3:+53567598 | Msa0818110:CDS |
| TTCAGAGCAAATGGAGGATG+TGG | 0.534038 | 5_3:+53569782 | Msa0818110:CDS |
| TCATCAGAAGAAGAATCATC+GGG | 0.538026 | 5_3:+53568592 | Msa0818110:CDS |
| TAGTTGATTTCCAGTAAGGA+AGG | 0.543182 | 5_3:-53567940 | None:intergenic |
| TGAAGTGGAGATTAATAGTA+CGG | 0.546568 | 5_3:+53568639 | Msa0818110:CDS |
| AAATTTACATGGGACATGGT+TGG | 0.547253 | 5_3:+53569994 | Msa0818110:CDS |
| GCCAGATTCTACAATTGAAG+TGG | 0.550059 | 5_3:+53568624 | Msa0818110:CDS |
| ACAATGAGTTTGATCCTACA+AGG | 0.550530 | 5_3:+53569849 | Msa0818110:CDS |
| GACTTAAAACGTTCTTTCGG+AGG | 0.550648 | 5_3:-53568517 | None:intergenic |
| AATGGAAGTGATAGCGATGA+GGG | 0.559246 | 5_3:+53568761 | Msa0818110:CDS |
| CAATGCTCCTTTGAAAACCG+AGG | 0.563473 | 5_3:+53567700 | Msa0818110:CDS |
| ATTTGACACGTGTCGCCCTA+GGG | 0.563743 | 5_3:-53569108 | None:intergenic |
| ATCATAAAGGCGCTGCAACA+AGG | 0.565020 | 5_3:+53567987 | Msa0818110:CDS |
| GACTGAACTGGTTCCACCTG+AGG | 0.567204 | 5_3:+53567436 | Msa0818110:CDS |
| AGAAGAAGAATCATCGGGAA+AGG | 0.569568 | 5_3:+53568597 | Msa0818110:CDS |
| CAAGCTCTGGAACAGTCAAA+GGG | 0.571677 | 5_3:-53570725 | None:intergenic |
| GGTTCCACCTGAGGACCTCA+AGG | 0.573335 | 5_3:+53567445 | Msa0818110:CDS |
| GTAATGTAATTAATTCATCT+AGG | 0.573641 | 5_3:+53570933 | Msa0818110:three_prime_UTR |
| TTGGATGTATGGAGCTCAGA+TGG | 0.573916 | 5_3:+53569156 | Msa0818110:CDS |
| ATTATTTCAAGAGTGTTCAC+CGG | 0.574429 | 5_3:+53568814 | Msa0818110:CDS |
| TGACATGTATGATCCTCCTC+CGG | 0.578192 | 5_3:-53567486 | None:intergenic |
| AGGGGTTAGGCAGATCACTC+TGG | 0.583024 | 5_3:+53569744 | Msa0818110:intron |
| ATGTTGATCAAAGTAGAGAA+AGG | 0.584587 | 5_3:+53567630 | Msa0818110:CDS |
| AAAACTGGAAGATATCATCA+AGG | 0.585709 | 5_3:-53567661 | None:intergenic |
| ATATTAAAGTTGATCATGGA+TGG | 0.592217 | 5_3:+53568057 | Msa0818110:CDS |
| ATCTCCTTGAGGTCCTCAGG+TGG | 0.594384 | 5_3:-53567449 | None:intergenic |
| AGATCACTCTGGTTGATGCA+AGG | 0.597460 | 5_3:+53569755 | Msa0818110:CDS |
| AAAGATAAATTGAAAACTGA+TGG | 0.597987 | 5_3:+53568887 | Msa0818110:CDS |
| ACCTTTGTGTAAAAGTCTGG+TGG | 0.605391 | 5_3:-53570056 | None:intergenic |
| TGATAGCGATGAGGGAGACG+CGG | 0.617630 | 5_3:+53568769 | Msa0818110:CDS |
| GATAGCGATGAGGGAGACGC+GGG | 0.620564 | 5_3:+53568770 | Msa0818110:CDS |
| AGAGAACATATCAAAGTGTG+TGG | 0.622904 | 5_3:-53570033 | None:intergenic |
| TATACTTAGGGTGTACCCTA+GGG | 0.624728 | 5_3:+53569093 | Msa0818110:CDS |
| AAGAAACCGATGTAATTGCT+CGG | 0.626617 | 5_3:-53567510 | None:intergenic |
| TGGACAATTGGTTTCCTGTG+TGG | 0.629099 | 5_3:+53570685 | Msa0818110:CDS |
| CCATACATCCAACCAAGATG+TGG | 0.631436 | 5_3:-53569145 | None:intergenic |
| GTATGCCTGCTGACATTGCA+AGG | 0.644882 | 5_3:+53570643 | Msa0818110:CDS |
| TATATGAAATAATGTGACAA+TGG | 0.645807 | 5_3:-53567903 | None:intergenic |
| TCTTGTGGAGCATCAAGGCG+AGG | 0.647884 | 5_3:+53567529 | Msa0818110:CDS |
| GAATGGAAGTGATAGCGATG+AGG | 0.651551 | 5_3:+53568760 | Msa0818110:intron |
| GAGAACATATCAAAGTGTGT+GGG | 0.660094 | 5_3:-53570032 | None:intergenic |
| AAACTGGAAGATATCATCAA+GGG | 0.660585 | 5_3:-53567660 | None:intergenic |
| TCAAACTCTTCATTCCACAC+AGG | 0.668818 | 5_3:-53570699 | None:intergenic |
| GGAATGTTCAGAGCAAATGG+AGG | 0.692479 | 5_3:+53569776 | Msa0818110:CDS |
| TCCAACCGGATCAAGGACAA+CGG | 0.693783 | 5_3:+53568538 | Msa0818110:CDS |
| TGTCAACCGAGCAATTACAT+CGG | 0.739747 | 5_3:+53567504 | Msa0818110:CDS |
| GTAAAAGACAAAGATCAAGG+AGG | 0.751088 | 5_3:+53570765 | Msa0818110:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATCATGTTAAAATATAAATA+GGG | + | chr5_3:53569433-53569452 | Msa0818110:intron | 10.0% |
| !!! | AATTTCAAGATTTAATTTAT+TGG | - | chr5_3:53569484-53569503 | None:intergenic | 10.0% |
| !! | TATTGTTTATATAGTCTAAA+TGG | - | chr5_3:53568085-53568104 | None:intergenic | 15.0% |
| !!! | TTTTTTTGTTTTTATCAGAA+TGG | + | chr5_3:53568743-53568762 | Msa0818110:intron | 15.0% |
| !! | CATCATGTTAAAATATAAAT+AGG | + | chr5_3:53569432-53569451 | Msa0818110:intron | 15.0% |
| !! | AAAGTAGTAAGAAAAAAAAA+AGG | - | chr5_3:53569713-53569732 | None:intergenic | 15.0% |
| !! | ATGTTAATATGTTTAATAAC+AGG | + | chr5_3:53569968-53569987 | Msa0818110:intron | 15.0% |
| !! | ATAATCCAAAAATATTTGTT+TGG | - | chr5_3:53570119-53570138 | None:intergenic | 15.0% |
| !! | TTCTAATAGAAATAAAATAG+AGG | + | chr5_3:53570387-53570406 | Msa0818110:intron | 15.0% |
| !! | TATATGAAATAATGTGACAA+TGG | - | chr5_3:53567906-53567925 | None:intergenic | 20.0% |
| !! | TCACATTATTTCATATATAC+AGG | + | chr5_3:53567909-53567928 | Msa0818110:CDS | 20.0% |
| !! | ATGAATATTGAGATTAGAAA+AGG | - | chr5_3:53568344-53568363 | None:intergenic | 20.0% |
| !! | AATCCAAAATAAGAAACTTA+AGG | + | chr5_3:53568856-53568875 | Msa0818110:CDS | 20.0% |
| !! | ATCCAAAATAAGAAACTTAA+GGG | + | chr5_3:53568857-53568876 | Msa0818110:CDS | 20.0% |
| !! | AAAGATAAATTGAAAACTGA+TGG | + | chr5_3:53568887-53568906 | Msa0818110:CDS | 20.0% |
| !! | TCACACAAAAAAATATACTT+AGG | + | chr5_3:53569080-53569099 | Msa0818110:CDS | 20.0% |
| !! | CACACAAAAAAATATACTTA+GGG | + | chr5_3:53569081-53569100 | Msa0818110:CDS | 20.0% |
| !!! | CTACTTTTTCAAATTATTGT+CGG | + | chr5_3:53569605-53569624 | Msa0818110:intron | 20.0% |
| !! | TACCATATCATATCTTATAA+AGG | + | chr5_3:53569679-53569698 | Msa0818110:intron | 20.0% |
| !! | TTCCTTTATAAGATATGATA+TGG | - | chr5_3:53569684-53569703 | None:intergenic | 20.0% |
| !! | TAAAATTGAGTAATGTACTA+TGG | - | chr5_3:53569911-53569930 | None:intergenic | 20.0% |
| !!! | GTACATTACTCAATTTTAAA+AGG | + | chr5_3:53569913-53569932 | Msa0818110:intron | 20.0% |
| !! | ATAACAGGTAAAAATTTACA+TGG | + | chr5_3:53569983-53570002 | Msa0818110:intron | 20.0% |
| !! | TAACAGGTAAAAATTTACAT+GGG | + | chr5_3:53569984-53570003 | Msa0818110:intron | 20.0% |
| !! | AAAATTATCGATGTAAGATT+AGG | + | chr5_3:53570192-53570211 | Msa0818110:intron | 20.0% |
| !! | AAATTATCGATGTAAGATTA+GGG | + | chr5_3:53570193-53570212 | Msa0818110:intron | 20.0% |
| !! | AATAGAAATAAAATAGAGGT+AGG | + | chr5_3:53570391-53570410 | Msa0818110:intron | 20.0% |
| !! | ATAGAAATAAAATAGAGGTA+GGG | + | chr5_3:53570392-53570411 | Msa0818110:intron | 20.0% |
| !! | TTATATGTATATCTTACAGT+TGG | + | chr5_3:53570590-53570609 | Msa0818110:intron | 20.0% |
| !! | GTAATGTAATTAATTCATCT+AGG | + | chr5_3:53570933-53570952 | Msa0818110:three_prime_UTR | 20.0% |
| !! | GTTCTTTATCAAAAAGTACA+AGG | + | chr5_3:53567412-53567431 | Msa0818110:CDS | 25.0% |
| ! | GTGTTATAGAACTTGATTTA+TGG | + | chr5_3:53568015-53568034 | Msa0818110:CDS | 25.0% |
| ! | ATATCTTCTTTACTAGAAGT+TGG | - | chr5_3:53568041-53568060 | None:intergenic | 25.0% |
| !! | GAAGATATTAAAGTTGATCA+TGG | + | chr5_3:53568053-53568072 | Msa0818110:CDS | 25.0% |
| !! | ATATTAAAGTTGATCATGGA+TGG | + | chr5_3:53568057-53568076 | Msa0818110:CDS | 25.0% |
| !! | GTTATTATGCTTTTGTAATC+CGG | - | chr5_3:53568836-53568855 | None:intergenic | 25.0% |
| !!! | TACCCTTAAGTTTCTTATTT+TGG | - | chr5_3:53568862-53568881 | None:intergenic | 25.0% |
| !!! | TATATTTTTTTGTGTGAACC+TGG | - | chr5_3:53569077-53569096 | None:intergenic | 25.0% |
| ! | TCTCTCTATCACAATTAAAA+AGG | + | chr5_3:53569265-53569284 | Msa0818110:intron | 25.0% |
| ! | TTGAAAATGTTGTTAGAAAG+TGG | + | chr5_3:53569310-53569329 | Msa0818110:intron | 25.0% |
| ! | CCAAAAGCAGATTAATATAT+AGG | - | chr5_3:53570095-53570114 | None:intergenic | 25.0% |
| !! | CCTATATATTAATCTGCTTT+TGG | + | chr5_3:53570092-53570111 | Msa0818110:intron | 25.0% |
| !! | TTGGTCCAAACAAATATTTT+TGG | + | chr5_3:53570111-53570130 | Msa0818110:intron | 25.0% |
| ! | TACTTGAAACAGTTGTAAAA+TGG | - | chr5_3:53570450-53570469 | None:intergenic | 25.0% |
| !!! | ATTTTACAACTGTTTCAAGT+AGG | + | chr5_3:53570449-53570468 | Msa0818110:intron | 25.0% |
| ! | GAAGAAAACAAAAGTAATCA+TGG | + | chr5_3:53570665-53570684 | Msa0818110:CDS | 25.0% |
| ! | AGTCCCTTTATATAATGAAA+AGG | + | chr5_3:53570851-53570870 | Msa0818110:CDS | 25.0% |
| ! | GTCCCTTTATATAATGAAAA+GGG | + | chr5_3:53570852-53570871 | Msa0818110:CDS | 25.0% |
| !! | CACCCTTTTCATTATATAAA+GGG | - | chr5_3:53570857-53570876 | None:intergenic | 25.0% |
| !! | TCACCCTTTTCATTATATAA+AGG | - | chr5_3:53570858-53570877 | None:intergenic | 25.0% |
| GAAAAACATGGGAAATAAGA+TGG | + | chr5_3:53567361-53567380 | Msa0818110:exon | 30.0% | |
| ACTCATAAAAAATCTCCTTG+AGG | - | chr5_3:53567463-53567482 | None:intergenic | 30.0% | |
| !!! | GAGATTTTTTATGAGTTTGC+CGG | + | chr5_3:53567467-53567486 | Msa0818110:CDS | 30.0% |
| ATGTTGATCAAAGTAGAGAA+AGG | + | chr5_3:53567630-53567649 | Msa0818110:CDS | 30.0% | |
| AAACTGGAAGATATCATCAA+GGG | - | chr5_3:53567663-53567682 | None:intergenic | 30.0% | |
| AAAACTGGAAGATATCATCA+AGG | - | chr5_3:53567664-53567683 | None:intergenic | 30.0% | |
| ! | GTAATGACATTTAGTCTTTC+TGG | - | chr5_3:53567860-53567879 | None:intergenic | 30.0% |
| GAAAGACTAAATGTCATTAC+AGG | + | chr5_3:53567860-53567879 | Msa0818110:intron | 30.0% | |
| AAACATTTGATAGGTGATAC+AGG | - | chr5_3:53568190-53568209 | None:intergenic | 30.0% | |
| TGTATCACCTATCAAATGTT+TGG | + | chr5_3:53568189-53568208 | Msa0818110:CDS | 30.0% | |
| ATAGACTCCAAACATTTGAT+AGG | - | chr5_3:53568199-53568218 | None:intergenic | 30.0% | |
| TTGGAGTCTATCAAGAAATA+TGG | + | chr5_3:53568208-53568227 | Msa0818110:CDS | 30.0% | |
| TCTTCTATAGTTATGATCAC+TGG | - | chr5_3:53568253-53568272 | None:intergenic | 30.0% | |
| GTTAAACTTAAACATTCTGC+TGG | - | chr5_3:53568445-53568464 | None:intergenic | 30.0% | |
| TTTAACAGAATTTCCTTCAC+CGG | + | chr5_3:53568459-53568478 | Msa0818110:CDS | 30.0% | |
| !! | ACTCGATTTTTCAATGATTC+CGG | - | chr5_3:53568481-53568500 | None:intergenic | 30.0% |
| TTGGACTTAAAACGTTCTTT+CGG | - | chr5_3:53568523-53568542 | None:intergenic | 30.0% | |
| ATCATCAGAAGAAGAATCAT+CGG | + | chr5_3:53568591-53568610 | Msa0818110:CDS | 30.0% | |
| TGAAGTGGAGATTAATAGTA+CGG | + | chr5_3:53568639-53568658 | Msa0818110:CDS | 30.0% | |
| !! | ATTATTTCAAGAGTGTTCAC+CGG | + | chr5_3:53568814-53568833 | Msa0818110:CDS | 30.0% |
| GTTTGAATCAGATAAACCAT+AGG | - | chr5_3:53569044-53569063 | None:intergenic | 30.0% | |
| ATTCAAACTGTTATTCTTCC+AGG | + | chr5_3:53569056-53569075 | Msa0818110:intron | 30.0% | |
| TCATGGAAATGGAATAATAG+TGG | + | chr5_3:53569342-53569361 | Msa0818110:intron | 30.0% | |
| CATGGAAATGGAATAATAGT+GGG | + | chr5_3:53569343-53569362 | Msa0818110:intron | 30.0% | |
| ! | AAGTTAATCCACTTGTCTTT+TGG | - | chr5_3:53569648-53569667 | None:intergenic | 30.0% |
| !!! | TACTACTTTTTTACCTCGAT+AGG | + | chr5_3:53569724-53569743 | Msa0818110:intron | 30.0% |
| !!! | ACTACTTTTTTACCTCGATA+GGG | + | chr5_3:53569725-53569744 | Msa0818110:intron | 30.0% |
| !! | ACCTTTAATGTCTTTTTCAC+TGG | - | chr5_3:53569881-53569900 | None:intergenic | 30.0% |
| GTAAAAATTTACATGGGACA+TGG | + | chr5_3:53569990-53570009 | Msa0818110:CDS | 30.0% | |
| TGTTGCACAAGAATTATGAA+GGG | - | chr5_3:53570167-53570186 | None:intergenic | 30.0% | |
| TTGTTGCACAAGAATTATGA+AGG | - | chr5_3:53570168-53570187 | None:intergenic | 30.0% | |
| TCTTGTGATCATTGATATTG+TGG | + | chr5_3:53570233-53570252 | Msa0818110:intron | 30.0% | |
| ! | TGGTGACATACAAATTTTGA+AGG | - | chr5_3:53570298-53570317 | None:intergenic | 30.0% |
| TACGAATTTCACTCATAACA+AGG | + | chr5_3:53570349-53570368 | Msa0818110:intron | 30.0% | |
| AGTTTGACCTAGTAACTTTA+TGG | - | chr5_3:53570489-53570508 | None:intergenic | 30.0% | |
| CAAAAGTAATCATGGACAAT+TGG | + | chr5_3:53570673-53570692 | Msa0818110:CDS | 30.0% | |
| CAAGTAAAAGACAAAGATCA+AGG | + | chr5_3:53570762-53570781 | Msa0818110:CDS | 30.0% | |
| !!! | CCAAGTTTTATCTCTGAAAT+TGG | - | chr5_3:53570822-53570841 | None:intergenic | 30.0% |
| CCAATTTCAGAGATAAAACT+TGG | + | chr5_3:53570819-53570838 | Msa0818110:CDS | 30.0% | |
| AATCTGTAAAGTTGCTAATG+AGG | + | chr5_3:53570886-53570905 | Msa0818110:CDS | 30.0% | |
| AACACAGAGAGGAAAAACAT+GGG | + | chr5_3:53567350-53567369 | Msa0818110:exon | 35.0% | |
| !!! | ATTTTTTATGAGTTTGCCGG+AGG | + | chr5_3:53567470-53567489 | Msa0818110:CDS | 35.0% |
| AAGAAACCGATGTAATTGCT+CGG | - | chr5_3:53567513-53567532 | None:intergenic | 35.0% | |
| ! | ATAAGATTTTGCAGCTGAGA+AGG | + | chr5_3:53567588-53567607 | Msa0818110:CDS | 35.0% |
| AATCATCTAGGAGCAAAAAC+TGG | - | chr5_3:53567679-53567698 | None:intergenic | 35.0% | |
| !! | AAGGAGCATTGAAATCATCT+AGG | - | chr5_3:53567691-53567710 | None:intergenic | 35.0% |
| !! | TCTTTCTGGTTAGCAAAGTA+AGG | - | chr5_3:53567846-53567865 | None:intergenic | 35.0% |
| ! | TAGTTGATTTCCAGTAAGGA+AGG | - | chr5_3:53567943-53567962 | None:intergenic | 35.0% |
| ! | TGCTTAGTTGATTTCCAGTA+AGG | - | chr5_3:53567947-53567966 | None:intergenic | 35.0% |
| CAGTGAAGAACCAATCATAA+AGG | + | chr5_3:53567974-53567993 | Msa0818110:CDS | 35.0% | |
| ! | TTGATTTTTGTCACTGTCAC+AGG | + | chr5_3:53568152-53568171 | Msa0818110:intron | 35.0% |
| CAGATGGCAACTCAAATATT+TGG | + | chr5_3:53568397-53568416 | Msa0818110:intron | 35.0% | |
| !! | TTTTTCAATGATTCCGGTGA+AGG | - | chr5_3:53568475-53568494 | None:intergenic | 35.0% |
| !! | AAGAACGTTTTAAGTCCAAC+CGG | + | chr5_3:53568524-53568543 | Msa0818110:CDS | 35.0% |
| TCATCAGAAGAAGAATCATC+GGG | + | chr5_3:53568592-53568611 | Msa0818110:CDS | 35.0% | |
| TCCACTTCAATTGTAGAATC+TGG | - | chr5_3:53568628-53568647 | None:intergenic | 35.0% | |
| !!! | AGATTCTGAAGCCTTTTCTA+AGG | - | chr5_3:53568945-53568964 | None:intergenic | 35.0% |
| ATAAACCATAGGACACTGTT+AGG | - | chr5_3:53569033-53569052 | None:intergenic | 35.0% | |
| AAGATGTGGCTTGAAATTTG+TGG | - | chr5_3:53569134-53569153 | None:intergenic | 35.0% | |
| ACAAATTTCAAGCCACATCT+TGG | + | chr5_3:53569133-53569152 | Msa0818110:CDS | 35.0% | |
| TTGCATTCAATATGCAGGTT+AGG | + | chr5_3:53569179-53569198 | Msa0818110:intron | 35.0% | |
| TGCATTCAATATGCAGGTTA+GGG | + | chr5_3:53569180-53569199 | Msa0818110:intron | 35.0% | |
| ! | GAAAGTGGTGTTTCTTTTCA+TGG | + | chr5_3:53569325-53569344 | Msa0818110:intron | 35.0% |
| ! | GGTGTTTCTTTTCATGGAAA+TGG | + | chr5_3:53569331-53569350 | Msa0818110:intron | 35.0% |
| ! | AATTTTTGCTAGCAAGCGAT+TGG | + | chr5_3:53569500-53569519 | Msa0818110:intron | 35.0% |
| !!! | CTACTTTTTTACCTCGATAG+GGG | + | chr5_3:53569726-53569745 | Msa0818110:intron | 35.0% |
| GGTTTCTGCATTAGAATTTC+AGG | - | chr5_3:53569821-53569840 | None:intergenic | 35.0% | |
| TCAAACTCATTGTCACATTG+AGG | - | chr5_3:53569842-53569861 | None:intergenic | 35.0% | |
| ACAATGAGTTTGATCCTACA+AGG | + | chr5_3:53569849-53569868 | Msa0818110:CDS | 35.0% | |
| GCCAGTGAAAAAGACATTAA+AGG | + | chr5_3:53569877-53569896 | Msa0818110:CDS | 35.0% | |
| AAATTTACATGGGACATGGT+TGG | + | chr5_3:53569994-53570013 | Msa0818110:CDS | 35.0% | |
| GAGAACATATCAAAGTGTGT+GGG | - | chr5_3:53570035-53570054 | None:intergenic | 35.0% | |
| AGAGAACATATCAAAGTGTG+TGG | - | chr5_3:53570036-53570055 | None:intergenic | 35.0% | |
| CTTCGTACCATAAAGTTACT+AGG | + | chr5_3:53570479-53570498 | Msa0818110:intron | 35.0% | |
| TCAAACTCTTACCACTGAAT+CGG | + | chr5_3:53570502-53570521 | Msa0818110:intron | 35.0% | |
| !!! | GTTGGATTAGTTTTTACGAC+AGG | + | chr5_3:53570608-53570627 | Msa0818110:intron | 35.0% |
| !!! | GATTAGTTTTTACGACAGGT+TGG | + | chr5_3:53570612-53570631 | Msa0818110:intron | 35.0% |
| GTAAAAGACAAAGATCAAGG+AGG | + | chr5_3:53570765-53570784 | Msa0818110:CDS | 35.0% | |
| GAACACAGAGAGGAAAAACA+TGG | + | chr5_3:53567349-53567368 | Msa0818110:exon | 40.0% | |
| AAAGTACAAGGTGACTGAAC+TGG | + | chr5_3:53567424-53567443 | Msa0818110:CDS | 40.0% | |
| TGTCAACCGAGCAATTACAT+CGG | + | chr5_3:53567504-53567523 | Msa0818110:CDS | 40.0% | |
| !! | GCAATTACATCGGTTTCTTG+TGG | + | chr5_3:53567514-53567533 | Msa0818110:CDS | 40.0% |
| CGAGGAGAATTTCACGTTAT+TGG | + | chr5_3:53567547-53567566 | Msa0818110:CDS | 40.0% | |
| ! | CGTTTTACCTCGGTTTTCAA+AGG | - | chr5_3:53567710-53567729 | None:intergenic | 40.0% |
| ! | GTAGTGACTACGTTTTACCT+CGG | - | chr5_3:53567720-53567739 | None:intergenic | 40.0% |
| ! | TCGTTTTATCTTGTCGCAGA+TGG | + | chr5_3:53568381-53568400 | Msa0818110:intron | 40.0% |
| ! | CTTAAACATTCTGCTGGTTG+AGG | - | chr5_3:53568439-53568458 | None:intergenic | 40.0% |
| GACTTAAAACGTTCTTTCGG+AGG | - | chr5_3:53568520-53568539 | None:intergenic | 40.0% | |
| !! | TTTTAAGTCCAACCGGATCA+AGG | + | chr5_3:53568531-53568550 | Msa0818110:CDS | 40.0% |
| AGAAGAAGAATCATCGGGAA+AGG | + | chr5_3:53568597-53568616 | Msa0818110:CDS | 40.0% | |
| GCCAGATTCTACAATTGAAG+TGG | + | chr5_3:53568624-53568643 | Msa0818110:CDS | 40.0% | |
| ! | AATGGAAGTGATAGCGATGA+GGG | + | chr5_3:53568761-53568780 | Msa0818110:CDS | 40.0% |
| GAGCGAAACAACCTTAGAAA+AGG | + | chr5_3:53568931-53568950 | Msa0818110:CDS | 40.0% | |
| GAAAAGGCTTCAGAATCTCA+TGG | + | chr5_3:53568947-53568966 | Msa0818110:CDS | 40.0% | |
| CTCATGGAACAGACATCATT+AGG | + | chr5_3:53568963-53568982 | Msa0818110:CDS | 40.0% | |
| TAGTACCTAACAGTGTCCTA+TGG | + | chr5_3:53569025-53569044 | Msa0818110:intron | 40.0% | |
| ATATACTTAGGGTGTACCCT+AGG | + | chr5_3:53569092-53569111 | Msa0818110:CDS | 40.0% | |
| TATACTTAGGGTGTACCCTA+GGG | + | chr5_3:53569093-53569112 | Msa0818110:CDS | 40.0% | |
| ATTTCAAGCCACATCTTGGT+TGG | + | chr5_3:53569137-53569156 | Msa0818110:CDS | 40.0% | |
| GATGGTTGCATTCAATATGC+AGG | + | chr5_3:53569174-53569193 | Msa0818110:CDS | 40.0% | |
| CGAAAACATCGAAAGCAAGT+TGG | - | chr5_3:53569214-53569233 | None:intergenic | 40.0% | |
| !! | CTTTCAGCTGTTTTCTGATG+TGG | + | chr5_3:53569390-53569409 | Msa0818110:intron | 40.0% |
| AACATGATGACATGCACACT+AGG | - | chr5_3:53569421-53569440 | None:intergenic | 40.0% | |
| CAAGCGATTGGTGAATAATG+TGG | + | chr5_3:53569512-53569531 | Msa0818110:intron | 40.0% | |
| ! | TTTTTACCTCGATAGGGGTT+AGG | + | chr5_3:53569731-53569750 | Msa0818110:intron | 40.0% |
| CAAGGAATGTTCAGAGCAAA+TGG | + | chr5_3:53569773-53569792 | Msa0818110:CDS | 40.0% | |
| TTCACTGGCATAATCCTTGT+AGG | - | chr5_3:53569866-53569885 | None:intergenic | 40.0% | |
| ! | TCCACCAGACTTTTACACAA+AGG | + | chr5_3:53570055-53570074 | Msa0818110:CDS | 40.0% |
| ACCTTTGTGTAAAAGTCTGG+TGG | - | chr5_3:53570059-53570078 | None:intergenic | 40.0% | |
| CTGACCTTTGTGTAAAAGTC+TGG | - | chr5_3:53570062-53570081 | None:intergenic | 40.0% | |
| AGATTAGGGTTTACATGCTG+TGG | + | chr5_3:53570207-53570226 | Msa0818110:intron | 40.0% | |
| AGTTTGCAACACAACTGTTG+TGG | - | chr5_3:53570318-53570337 | None:intergenic | 40.0% | |
| !! | TTACGACAGGTTGGTATTGT+TGG | + | chr5_3:53570621-53570640 | Msa0818110:intron | 40.0% |
| TCAAACTCTTCATTCCACAC+AGG | - | chr5_3:53570702-53570721 | None:intergenic | 40.0% | |
| ! | ATCTGAAGTAAAGCAAGCTC+TGG | - | chr5_3:53570741-53570760 | None:intergenic | 40.0% |
| AAAATCTCCTTGAGGTCCTC+AGG | - | chr5_3:53567455-53567474 | None:intergenic | 45.0% | |
| ! | TTTTATGAGTTTGCCGGAGG+AGG | + | chr5_3:53567473-53567492 | Msa0818110:CDS | 45.0% |
| TGACATGTATGATCCTCCTC+CGG | - | chr5_3:53567489-53567508 | None:intergenic | 45.0% | |
| ! | CAATGCTCCTTTGAAAACCG+AGG | + | chr5_3:53567700-53567719 | Msa0818110:CDS | 45.0% |
| GGACACAATTCCTTCCTTAC+TGG | + | chr5_3:53567930-53567949 | Msa0818110:CDS | 45.0% | |
| TGTTGCAGCGCCTTTATGAT+TGG | - | chr5_3:53567987-53568006 | None:intergenic | 45.0% | |
| !! | ATCATAAAGGCGCTGCAACA+AGG | + | chr5_3:53567987-53568006 | Msa0818110:CDS | 45.0% |
| ! | GGCAACTATCATGCTCTAGA+TGG | + | chr5_3:53568559-53568578 | Msa0818110:CDS | 45.0% |
| ! | GAATGGAAGTGATAGCGATG+AGG | + | chr5_3:53568760-53568779 | Msa0818110:intron | 45.0% |
| GTGAACTTAGACGCCTAAGT+TGG | + | chr5_3:53568909-53568928 | Msa0818110:CDS | 45.0% | |
| ! | AGGTTGTTTCGCTCCAACTT+AGG | - | chr5_3:53568925-53568944 | None:intergenic | 45.0% |
| CCATACATCCAACCAAGATG+TGG | - | chr5_3:53569148-53569167 | None:intergenic | 45.0% | |
| CCACATCTTGGTTGGATGTA+TGG | + | chr5_3:53569145-53569164 | Msa0818110:CDS | 45.0% | |
| TTGGATGTATGGAGCTCAGA+TGG | + | chr5_3:53569156-53569175 | Msa0818110:CDS | 45.0% | |
| ACAGCTGAAAGATCTGACTC+AGG | - | chr5_3:53569381-53569400 | None:intergenic | 45.0% | |
| CAGTGCTTCCAAAAGACAAG+TGG | + | chr5_3:53569637-53569656 | Msa0818110:intron | 45.0% | |
| ! | AGATCACTCTGGTTGATGCA+AGG | + | chr5_3:53569755-53569774 | Msa0818110:CDS | 45.0% |
| GGAATGTTCAGAGCAAATGG+AGG | + | chr5_3:53569776-53569795 | Msa0818110:CDS | 45.0% | |
| TTCAGAGCAAATGGAGGATG+TGG | + | chr5_3:53569782-53569801 | Msa0818110:CDS | 45.0% | |
| CAGTCGCAATGCAATTGCAA+AGG | + | chr5_3:53570272-53570291 | Msa0818110:intron | 45.0% | |
| TTCTTCCTTGCAATGTCAGC+AGG | - | chr5_3:53570651-53570670 | None:intergenic | 45.0% | |
| ! | TGGACAATTGGTTTCCTGTG+TGG | + | chr5_3:53570685-53570704 | Msa0818110:CDS | 45.0% |
| !! | CAAGCTCTGGAACAGTCAAA+GGG | - | chr5_3:53570728-53570747 | None:intergenic | 45.0% |
| GGAGGAAAAGATGACTTTGC+TGG | + | chr5_3:53570783-53570802 | Msa0818110:CDS | 45.0% | |
| ! | CGGTTTCTTGTGGAGCATCA+AGG | + | chr5_3:53567524-53567543 | Msa0818110:CDS | 50.0% |
| GCAGCTGAGAAGGATACATC+AGG | + | chr5_3:53567598-53567617 | Msa0818110:CDS | 50.0% | |
| TCCAACCGGATCAAGGACAA+CGG | + | chr5_3:53568538-53568557 | Msa0818110:CDS | 50.0% | |
| AGTTGCCGTTGTCCTTGATC+CGG | - | chr5_3:53568546-53568565 | None:intergenic | 50.0% | |
| ATTTGACACGTGTCGCCCTA+GGG | - | chr5_3:53569111-53569130 | None:intergenic | 50.0% | |
| ACCACTGAATCGGCACATCA+TGG | + | chr5_3:53570512-53570531 | Msa0818110:intron | 50.0% | |
| !! | TCCATGATGTGCCGATTCAG+TGG | - | chr5_3:53570516-53570535 | None:intergenic | 50.0% |
| GTATGCCTGCTGACATTGCA+AGG | + | chr5_3:53570643-53570662 | Msa0818110:CDS | 50.0% | |
| !! | GCAAGCTCTGGAACAGTCAA+AGG | - | chr5_3:53570729-53570748 | None:intergenic | 50.0% |
| ! | GACTGAACTGGTTCCACCTG+AGG | + | chr5_3:53567436-53567455 | Msa0818110:CDS | 55.0% |
| ATCTCCTTGAGGTCCTCAGG+TGG | - | chr5_3:53567452-53567471 | None:intergenic | 55.0% | |
| ! | TCTTGTGGAGCATCAAGGCG+AGG | + | chr5_3:53567529-53567548 | Msa0818110:CDS | 55.0% |
| ! | TGATAGCGATGAGGGAGACG+CGG | + | chr5_3:53568769-53568788 | Msa0818110:CDS | 55.0% |
| GATTTGACACGTGTCGCCCT+AGG | - | chr5_3:53569112-53569131 | None:intergenic | 55.0% | |
| GATCTGCCTAACCCCTATCG+AGG | - | chr5_3:53569740-53569759 | None:intergenic | 55.0% | |
| AGGGGTTAGGCAGATCACTC+TGG | + | chr5_3:53569744-53569763 | Msa0818110:intron | 55.0% | |
| GGTTCCACCTGAGGACCTCA+AGG | + | chr5_3:53567445-53567464 | Msa0818110:CDS | 60.0% | |
| GCCGTTGTCCTTGATCCGGT+TGG | - | chr5_3:53568542-53568561 | None:intergenic | 60.0% | |
| GATAGCGATGAGGGAGACGC+GGG | + | chr5_3:53568770-53568789 | Msa0818110:CDS | 60.0% | |
| GAGGGAGACGCGGGTTCATA+TGG | + | chr5_3:53568779-53568798 | Msa0818110:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_3 | gene | 53567348 | 53570968 | 53567348 | ID=Msa0818110;Name=Msa0818110 |
| chr5_3 | mRNA | 53567348 | 53570968 | 53567348 | ID=Msa0818110-mRNA-1;Parent=Msa0818110;Name=Msa0818110-mRNA-1;_AED=0.09;_eAED=0.09;_QI=20|1|1|1|1|1|9|45|607 |
| chr5_3 | exon | 53567348 | 53567721 | 53567348 | ID=Msa0818110-mRNA-1:exon:16123;Parent=Msa0818110-mRNA-1 |
| chr5_3 | exon | 53567882 | 53568078 | 53567882 | ID=Msa0818110-mRNA-1:exon:16124;Parent=Msa0818110-mRNA-1 |
| chr5_3 | exon | 53568174 | 53568309 | 53568174 | ID=Msa0818110-mRNA-1:exon:16125;Parent=Msa0818110-mRNA-1 |
| chr5_3 | exon | 53568400 | 53568660 | 53568400 | ID=Msa0818110-mRNA-1:exon:16126;Parent=Msa0818110-mRNA-1 |
| chr5_3 | exon | 53568761 | 53568984 | 53568761 | ID=Msa0818110-mRNA-1:exon:16127;Parent=Msa0818110-mRNA-1 |
| chr5_3 | exon | 53569078 | 53569195 | 53569078 | ID=Msa0818110-mRNA-1:exon:16128;Parent=Msa0818110-mRNA-1 |
| chr5_3 | exon | 53569746 | 53569898 | 53569746 | ID=Msa0818110-mRNA-1:exon:16129;Parent=Msa0818110-mRNA-1 |
| chr5_3 | exon | 53569990 | 53570076 | 53569990 | ID=Msa0818110-mRNA-1:exon:16130;Parent=Msa0818110-mRNA-1 |
| chr5_3 | exon | 53570630 | 53570968 | 53570630 | ID=Msa0818110-mRNA-1:exon:16131;Parent=Msa0818110-mRNA-1 |
| chr5_3 | five_prime_UTR | 53567348 | 53567367 | 53567348 | ID=Msa0818110-mRNA-1:five_prime_utr;Parent=Msa0818110-mRNA-1 |
| chr5_3 | CDS | 53567368 | 53567721 | 53567368 | ID=Msa0818110-mRNA-1:cds;Parent=Msa0818110-mRNA-1 |
| chr5_3 | CDS | 53567882 | 53568078 | 53567882 | ID=Msa0818110-mRNA-1:cds;Parent=Msa0818110-mRNA-1 |
| chr5_3 | CDS | 53568174 | 53568309 | 53568174 | ID=Msa0818110-mRNA-1:cds;Parent=Msa0818110-mRNA-1 |
| chr5_3 | CDS | 53568400 | 53568660 | 53568400 | ID=Msa0818110-mRNA-1:cds;Parent=Msa0818110-mRNA-1 |
| chr5_3 | CDS | 53568761 | 53568984 | 53568761 | ID=Msa0818110-mRNA-1:cds;Parent=Msa0818110-mRNA-1 |
| chr5_3 | CDS | 53569078 | 53569195 | 53569078 | ID=Msa0818110-mRNA-1:cds;Parent=Msa0818110-mRNA-1 |
| chr5_3 | CDS | 53569746 | 53569898 | 53569746 | ID=Msa0818110-mRNA-1:cds;Parent=Msa0818110-mRNA-1 |
| chr5_3 | CDS | 53569990 | 53570076 | 53569990 | ID=Msa0818110-mRNA-1:cds;Parent=Msa0818110-mRNA-1 |
| chr5_3 | CDS | 53570630 | 53570923 | 53570630 | ID=Msa0818110-mRNA-1:cds;Parent=Msa0818110-mRNA-1 |
| chr5_3 | three_prime_UTR | 53570924 | 53570968 | 53570924 | ID=Msa0818110-mRNA-1:three_prime_utr;Parent=Msa0818110-mRNA-1 |
| Gene Sequence |
| Protein sequence |
