Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0395750 | XP_013458949.1 | 88.741 | 675 | 63 | 3 | 20 | 693 | 1 | 663 | 0.0 | 1192 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0395750 | sp|Q8RXN8|NRP_ARATH | 36.296 | 135 | 77 | 3 | 336 | 463 | 212 | 344 | 5.97e-15 | 80.5 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0395750 | A0A072UUG0 | 88.741 | 675 | 63 | 3 | 20 | 693 | 1 | 663 | 0.0 | 1192 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0005380 | Msa0395750 | 0.802699 | 4.956502e-49 | -8.615850e-47 |
Msa0012200 | Msa0395750 | 0.806181 | 9.318648e-50 | -8.615850e-47 |
Msa0020410 | Msa0395750 | 0.826578 | 2.512361e-54 | -8.615850e-47 |
Msa0023330 | Msa0395750 | 0.826384 | 2.794551e-54 | -8.615850e-47 |
Msa0023480 | Msa0395750 | 0.801940 | 7.103124e-49 | -8.615850e-47 |
Msa0026910 | Msa0395750 | 0.827162 | 1.821560e-54 | -8.615850e-47 |
Msa0028620 | Msa0395750 | 0.828359 | 9.395104e-55 | -8.615850e-47 |
Msa0032080 | Msa0395750 | 0.864510 | 1.154424e-64 | -8.615850e-47 |
Msa0032100 | Msa0395750 | 0.826532 | 2.575694e-54 | -8.615850e-47 |
Msa0032470 | Msa0395750 | 0.845957 | 2.936335e-59 | -8.615850e-47 |
Msa0043980 | Msa0395750 | 0.841782 | 3.856226e-58 | -8.615850e-47 |
Msa0044000 | Msa0395750 | 0.837363 | 5.433546e-57 | -8.615850e-47 |
Msa0044260 | Msa0395750 | 0.803968 | 2.705893e-49 | -8.615850e-47 |
Msa0044330 | Msa0395750 | 0.808898 | 2.470392e-50 | -8.615850e-47 |
Msa0053860 | Msa0395750 | 0.803769 | 2.975530e-49 | -8.615850e-47 |
Msa0060730 | Msa0395750 | -0.801502 | 8.736003e-49 | -8.615850e-47 |
Msa0076290 | Msa0395750 | 0.831525 | 1.588952e-55 | -8.615850e-47 |
Msa0079070 | Msa0395750 | 0.807157 | 5.797538e-50 | -8.615850e-47 |
Msa0079130 | Msa0395750 | 0.816537 | 5.253658e-52 | -8.615850e-47 |
Msa0090550 | Msa0395750 | 0.807991 | 3.857017e-50 | -8.615850e-47 |
Msa0090570 | Msa0395750 | 0.806775 | 6.981772e-50 | -8.615850e-47 |
Msa0090970 | Msa0395750 | 0.806606 | 7.579814e-50 | -8.615850e-47 |
Msa0101500 | Msa0395750 | -0.801136 | 1.038363e-48 | -8.615850e-47 |
Msa0104230 | Msa0395750 | 0.848615 | 5.476683e-60 | -8.615850e-47 |
Msa0104240 | Msa0395750 | 0.834698 | 2.577937e-56 | -8.615850e-47 |
Msa0106620 | Msa0395750 | 0.807754 | 4.331150e-50 | -8.615850e-47 |
Msa0106710 | Msa0395750 | 0.826680 | 2.375435e-54 | -8.615850e-47 |
Msa0106850 | Msa0395750 | 0.820185 | 7.839808e-53 | -8.615850e-47 |
Msa0108140 | Msa0395750 | 0.815640 | 8.333243e-52 | -8.615850e-47 |
Msa0115790 | Msa0395750 | 0.840388 | 8.962225e-58 | -8.615850e-47 |
Msa0116080 | Msa0395750 | 0.801376 | 9.270779e-49 | -8.615850e-47 |
Msa0117520 | Msa0395750 | 0.833611 | 4.828402e-56 | -8.615850e-47 |
Msa0123000 | Msa0395750 | -0.822816 | 1.934178e-53 | -8.615850e-47 |
Msa0124320 | Msa0395750 | 0.833373 | 5.537099e-56 | -8.615850e-47 |
Msa0127800 | Msa0395750 | 0.839954 | 1.163075e-57 | -8.615850e-47 |
Msa0138020 | Msa0395750 | 0.831743 | 1.404139e-55 | -8.615850e-47 |
Msa0139550 | Msa0395750 | -0.834645 | 2.659495e-56 | -8.615850e-47 |
Msa0144530 | Msa0395750 | 0.810964 | 8.871425e-51 | -8.615850e-47 |
Msa0148080 | Msa0395750 | 0.820199 | 7.782727e-53 | -8.615850e-47 |
Msa0150230 | Msa0395750 | 0.860588 | 1.860093e-63 | -8.615850e-47 |
Msa0152560 | Msa0395750 | 0.800005 | 1.764983e-48 | -8.615850e-47 |
Msa0160960 | Msa0395750 | 0.848911 | 4.530739e-60 | -8.615850e-47 |
Msa0172080 | Msa0395750 | 0.830055 | 3.642164e-55 | -8.615850e-47 |
Msa0178570 | Msa0395750 | 0.824109 | 9.644945e-54 | -8.615850e-47 |
Msa0186950 | Msa0395750 | 0.855739 | 5.152955e-62 | -8.615850e-47 |
Msa0188590 | Msa0395750 | 0.826757 | 2.277212e-54 | -8.615850e-47 |
Msa0194080 | Msa0395750 | 0.802299 | 5.991633e-49 | -8.615850e-47 |
Msa0204960 | Msa0395750 | 0.812178 | 4.830392e-51 | -8.615850e-47 |
Msa0206830 | Msa0395750 | 0.803195 | 3.914270e-49 | -8.615850e-47 |
Msa0207040 | Msa0395750 | -0.811610 | 6.422611e-51 | -8.615850e-47 |
Msa0218370 | Msa0395750 | 0.829221 | 5.810105e-55 | -8.615850e-47 |
Msa0219590 | Msa0395750 | 0.830490 | 2.852463e-55 | -8.615850e-47 |
Msa0230610 | Msa0395750 | 0.803512 | 3.364811e-49 | -8.615850e-47 |
Msa0232020 | Msa0395750 | 0.802211 | 6.247297e-49 | -8.615850e-47 |
Msa0233370 | Msa0395750 | 0.813341 | 2.688433e-51 | -8.615850e-47 |
Msa0376910 | Msa0395750 | 0.803124 | 4.048474e-49 | -8.615850e-47 |
Msa0388730 | Msa0395750 | 0.800943 | 1.136943e-48 | -8.615850e-47 |
Msa0389210 | Msa0395750 | 0.821629 | 3.646709e-53 | -8.615850e-47 |
Msa0395750 | Msa0411390 | 0.817617 | 3.005050e-52 | -8.615850e-47 |
Msa0395750 | Msa0423860 | 0.812799 | 3.534368e-51 | -8.615850e-47 |
Msa0395750 | Msa0432160 | 0.810362 | 1.196841e-50 | -8.615850e-47 |
Msa0395750 | Msa0434540 | 0.800338 | 1.510193e-48 | -8.615850e-47 |
Msa0395750 | Msa0450400 | -0.801827 | 7.492971e-49 | -8.615850e-47 |
Msa0395750 | Msa0454360 | 0.841225 | 5.405344e-58 | -8.615850e-47 |
Msa0395750 | Msa0455760 | 0.815913 | 7.246238e-52 | -8.615850e-47 |
Msa0395750 | Msa0470880 | 0.821996 | 2.999159e-53 | -8.615850e-47 |
Msa0395750 | Msa0476680 | 0.817560 | 3.095180e-52 | -8.615850e-47 |
Msa0395750 | Msa0482940 | 0.813066 | 3.088624e-51 | -8.615850e-47 |
Msa0395750 | Msa0518170 | 0.812253 | 4.653378e-51 | -8.615850e-47 |
Msa0395750 | Msa0521010 | 0.819700 | 1.012072e-52 | -8.615850e-47 |
Msa0395750 | Msa0521270 | 0.849637 | 2.845252e-60 | -8.615850e-47 |
Msa0395750 | Msa0527540 | 0.835888 | 1.291046e-56 | -8.615850e-47 |
Msa0395750 | Msa0530560 | 0.826585 | 2.501956e-54 | -8.615850e-47 |
Msa0395750 | Msa0542260 | 0.800151 | 1.648349e-48 | -8.615850e-47 |
Msa0395750 | Msa0542560 | 0.814866 | 1.238504e-51 | -8.615850e-47 |
Msa0395750 | Msa0545050 | 0.818676 | 1.731318e-52 | -8.615850e-47 |
Msa0395750 | Msa0564850 | 0.833579 | 4.918172e-56 | -8.615850e-47 |
Msa0395750 | Msa0566350 | 0.834289 | 3.265834e-56 | -8.615850e-47 |
Msa0395750 | Msa0566750 | 0.841096 | 5.846806e-58 | -8.615850e-47 |
Msa0395750 | Msa0573890 | 0.804751 | 1.858741e-49 | -8.615850e-47 |
Msa0395750 | Msa0574930 | 0.811738 | 6.025864e-51 | -8.615850e-47 |
Msa0395750 | Msa0581400 | 0.817466 | 3.250644e-52 | -8.615850e-47 |
Msa0395750 | Msa0604290 | 0.827019 | 1.971514e-54 | -8.615850e-47 |
Msa0395750 | Msa0610250 | 0.815655 | 8.273249e-52 | -8.615850e-47 |
Msa0395750 | Msa0611540 | -0.838038 | 3.646569e-57 | -8.615850e-47 |
Msa0395750 | Msa0613110 | 0.847649 | 1.012114e-59 | -8.615850e-47 |
Msa0395750 | Msa0613340 | 0.841322 | 5.096999e-58 | -8.615850e-47 |
Msa0395750 | Msa0623990 | 0.813867 | 2.059040e-51 | -8.615850e-47 |
Msa0395750 | Msa0624060 | 0.830294 | 3.183781e-55 | -8.615850e-47 |
Msa0395750 | Msa0641130 | 0.815971 | 7.032929e-52 | -8.615850e-47 |
Msa0395750 | Msa0658890 | 0.803947 | 2.733764e-49 | -8.615850e-47 |
Msa0395750 | Msa0673120 | 0.847010 | 1.515361e-59 | -8.615850e-47 |
Msa0395750 | Msa0676130 | 0.832490 | 9.178067e-56 | -8.615850e-47 |
Msa0395750 | Msa0676180 | 0.831568 | 1.550826e-55 | -8.615850e-47 |
Msa0395750 | Msa0685090 | 0.811636 | 6.341748e-51 | -8.615850e-47 |
Msa0395750 | Msa0696540 | 0.824784 | 6.689319e-54 | -8.615850e-47 |
Msa0395750 | Msa0703810 | 0.801580 | 8.418805e-49 | -8.615850e-47 |
Msa0395750 | Msa0705990 | 0.809025 | 2.319894e-50 | -8.615850e-47 |
Msa0395750 | Msa0738030 | 0.801475 | 8.848201e-49 | -8.615850e-47 |
Msa0395750 | Msa0741440 | 0.805148 | 1.535172e-49 | -8.615850e-47 |
Msa0395750 | Msa0750850 | 0.805136 | 1.544518e-49 | -8.615850e-47 |
Msa0395750 | Msa0784480 | 0.801250 | 9.837852e-49 | -8.615850e-47 |
Msa0395750 | Msa0795340 | 0.816128 | 6.486746e-52 | -8.615850e-47 |
Msa0395750 | Msa0818060 | 0.822994 | 1.758057e-53 | -8.615850e-47 |
Msa0395750 | Msa0822500 | 0.821948 | 3.077346e-53 | -8.615850e-47 |
Msa0395750 | Msa0830230 | 0.807036 | 6.150304e-50 | -8.615850e-47 |
Msa0395750 | Msa0831850 | 0.806206 | 9.205528e-50 | -8.615850e-47 |
Msa0395750 | Msa0858390 | 0.810358 | 1.199232e-50 | -8.615850e-47 |
Msa0395750 | Msa0865030 | 0.812225 | 4.718621e-51 | -8.615850e-47 |
Msa0395750 | Msa0878220 | 0.839222 | 1.802582e-57 | -8.615850e-47 |
Msa0395750 | Msa0894710 | 0.811791 | 5.867169e-51 | -8.615850e-47 |
Msa0395750 | Msa0899970 | 0.801692 | 7.984773e-49 | -8.615850e-47 |
Msa0395750 | Msa0902830 | 0.809216 | 2.111209e-50 | -8.615850e-47 |
Msa0395750 | Msa0910620 | 0.832703 | 8.126302e-56 | -8.615850e-47 |
Msa0395750 | Msa0936390 | 0.816415 | 5.595184e-52 | -8.615850e-47 |
Msa0395750 | Msa0943970 | 0.829351 | 5.403238e-55 | -8.615850e-47 |
Msa0395750 | Msa0944020 | 0.818924 | 1.520440e-52 | -8.615850e-47 |
Msa0395750 | Msa0960390 | 0.822449 | 2.354820e-53 | -8.615850e-47 |
Msa0395750 | Msa0964310 | 0.818454 | 1.943980e-52 | -8.615850e-47 |
Msa0395750 | Msa0965080 | 0.820539 | 6.503502e-53 | -8.615850e-47 |
Msa0395750 | Msa0965290 | 0.832148 | 1.114944e-55 | -8.615850e-47 |
Msa0395750 | Msa0969730 | 0.806728 | 7.146222e-50 | -8.615850e-47 |
Msa0395750 | Msa0974950 | 0.806905 | 6.554592e-50 | -8.615850e-47 |
Msa0395750 | Msa0980880 | 0.816255 | 6.076975e-52 | -8.615850e-47 |
Msa0395750 | Msa0985180 | 0.834956 | 2.220754e-56 | -8.615850e-47 |
Msa0395750 | Msa0999680 | 0.829350 | 5.406813e-55 | -8.615850e-47 |
Msa0395750 | Msa1026640 | 0.832621 | 8.516711e-56 | -8.615850e-47 |
Msa0395750 | Msa1035480 | 0.817908 | 2.583783e-52 | -8.615850e-47 |
Msa0395750 | Msa1036300 | 0.827079 | 1.906944e-54 | -8.615850e-47 |
Msa0395750 | Msa1037520 | 0.803892 | 2.805535e-49 | -8.615850e-47 |
Msa0395750 | Msa1063420 | 0.805841 | 1.098804e-49 | -8.615850e-47 |
Msa0395750 | Msa1068480 | 0.813373 | 2.644501e-51 | -8.615850e-47 |
Msa0395750 | Msa1081790 | -0.802151 | 6.428808e-49 | -8.615850e-47 |
Msa0395750 | Msa1089460 | 0.838908 | 2.174216e-57 | -8.615850e-47 |
Msa0395750 | Msa1094190 | 0.809204 | 2.124323e-50 | -8.615850e-47 |
Msa0395750 | Msa1108710 | 0.800418 | 1.455104e-48 | -8.615850e-47 |
Msa0395750 | Msa1109680 | 0.818525 | 1.872875e-52 | -8.615850e-47 |
Msa0395750 | Msa1117240 | 0.810080 | 1.376789e-50 | -8.615850e-47 |
Msa0395750 | Msa1122150 | 0.862191 | 6.033199e-64 | -8.615850e-47 |
Msa0395750 | Msa1137780 | 0.821697 | 3.517043e-53 | -8.615850e-47 |
Msa0395750 | Msa1140630 | 0.852519 | 4.377773e-61 | -8.615850e-47 |
Msa0395750 | Msa1158390 | 0.814930 | 1.198853e-51 | -8.615850e-47 |
Msa0395750 | Msa1160560 | 0.855524 | 5.955233e-62 | -8.615850e-47 |
Msa0395750 | Msa1163090 | 0.803279 | 3.760414e-49 | -8.615850e-47 |
Msa0395750 | Msa1184910 | 0.806835 | 6.783575e-50 | -8.615850e-47 |
Msa0395750 | Msa1221330 | 0.829602 | 4.695333e-55 | -8.615850e-47 |
Msa0395750 | Msa1236440 | 0.855397 | 6.485870e-62 | -8.615850e-47 |
Msa0395750 | Msa1240970 | 0.802008 | 6.876942e-49 | -8.615850e-47 |
Msa0395750 | Msa1246360 | 0.828321 | 9.594357e-55 | -8.615850e-47 |
Msa0395750 | Msa1250110 | 0.800673 | 1.290823e-48 | -8.615850e-47 |
Msa0395750 | Msa1257750 | 0.800250 | 1.573712e-48 | -8.615850e-47 |
Msa0395750 | Msa1259860 | 0.809008 | 2.339959e-50 | -8.615850e-47 |
Msa0395750 | Msa1270730 | 0.803395 | 3.558280e-49 | -8.615850e-47 |
Msa0395750 | Msa1271130 | 0.835460 | 1.657122e-56 | -8.615850e-47 |
Msa0395750 | Msa1277670 | 0.857194 | 1.927092e-62 | -8.615850e-47 |
Msa0395750 | Msa1282440 | 0.806622 | 7.523445e-50 | -8.615850e-47 |
Msa0395750 | Msa1291450 | 0.840595 | 7.912276e-58 | -8.615850e-47 |
Msa0395750 | Msa1294820 | 0.800463 | 1.424587e-48 | -8.615850e-47 |
Msa0395750 | Msa1295330 | 0.803297 | 3.728934e-49 | -8.615850e-47 |
Msa0395750 | Msa1305810 | 0.807571 | 4.735769e-50 | -8.615850e-47 |
Msa0395750 | Msa1307180 | 0.816996 | 4.146070e-52 | -8.615850e-47 |
Msa0395750 | Msa1308870 | 0.806473 | 8.086791e-50 | -8.615850e-47 |
Msa0395750 | Msa1315750 | 0.821517 | 3.870803e-53 | -8.615850e-47 |
Msa0395750 | Msa1316360 | 0.815920 | 7.218159e-52 | -8.615850e-47 |
Msa0395750 | Msa1316440 | 0.823537 | 1.312849e-53 | -8.615850e-47 |
Msa0395750 | Msa1325410 | -0.831957 | 1.243270e-55 | -8.615850e-47 |
Msa0395750 | Msa1329200 | 0.823728 | 1.184520e-53 | -8.615850e-47 |
Msa0395750 | Msa1346840 | 0.829029 | 6.469996e-55 | -8.615850e-47 |
Msa0395750 | Msa1352280 | -0.820129 | 8.072301e-53 | -8.615850e-47 |
Msa0395750 | Msa1365610 | 0.808442 | 3.091543e-50 | -8.615850e-47 |
Msa0395750 | Msa1369920 | -0.807023 | 6.187333e-50 | -8.615850e-47 |
Msa0395750 | Msa1370590 | 0.814304 | 1.649019e-51 | -8.615850e-47 |
Msa0395750 | Msa1372240 | 0.821180 | 4.631079e-53 | -8.615850e-47 |
Msa0395750 | Msa1378410 | 0.830973 | 2.171335e-55 | -8.615850e-47 |
Msa0395750 | Msa1384100 | 0.815288 | 9.982358e-52 | -8.615850e-47 |
Msa0395750 | Msa1392210 | 0.803069 | 4.156790e-49 | -8.615850e-47 |
Msa0395750 | Msa1394380 | 0.815495 | 8.977629e-52 | -8.615850e-47 |
Msa0395750 | Msa1401990 | 0.843196 | 1.625442e-58 | -8.615850e-47 |
Msa0395750 | Msa1407760 | 0.823046 | 1.709881e-53 | -8.615850e-47 |
Msa0395750 | Msa1408050 | 0.804001 | 2.663808e-49 | -8.615850e-47 |
Msa0395750 | Msa1419690 | 0.811025 | 8.605791e-51 | -8.615850e-47 |
Msa0395750 | Msa1419840 | 0.823449 | 1.376679e-53 | -8.615850e-47 |
Msa0395750 | Msa1425260 | 0.801818 | 7.524228e-49 | -8.615850e-47 |
Msa0395750 | Msa1428780 | 0.811807 | 5.821381e-51 | -8.615850e-47 |
Msa0395750 | Msa1437730 | 0.848684 | 5.239447e-60 | -8.615850e-47 |
Msa0395750 | Msa1442920 | 0.843127 | 1.696029e-58 | -8.615850e-47 |
Msa0395750 | Msa1444120 | 0.811598 | 6.462848e-51 | -8.615850e-47 |
Msa0395750 | Msa1450440 | 0.807290 | 5.432335e-50 | -8.615850e-47 |
Msa0395750 | Msa1452710 | 0.805420 | 1.346399e-49 | -8.615850e-47 |
Msa0395750 | Msa1454570 | 0.801061 | 1.075335e-48 | -8.615850e-47 |
Msa0395750 | Msa1457620 | 0.802225 | 6.206419e-49 | -8.615850e-47 |
Msa0395750 | Msa1458680 | 0.838699 | 2.462636e-57 | -8.615850e-47 |
Msa0395750 | Msa1462290 | 0.807463 | 4.993163e-50 | -8.615850e-47 |
Msa0395750 | Msa1463900 | 0.810952 | 8.925111e-51 | -8.615850e-47 |
Msa0240270 | Msa0395750 | 0.827859 | 1.239570e-54 | -8.615850e-47 |
Msa0241140 | Msa0395750 | 0.821915 | 3.131551e-53 | -8.615850e-47 |
Msa0243090 | Msa0395750 | 0.818370 | 2.030987e-52 | -8.615850e-47 |
Msa0243480 | Msa0395750 | 0.801656 | 8.124702e-49 | -8.615850e-47 |
Msa0269560 | Msa0395750 | 0.805634 | 1.214123e-49 | -8.615850e-47 |
Msa0278580 | Msa0395750 | 0.840077 | 1.080412e-57 | -8.615850e-47 |
Msa0285330 | Msa0395750 | 0.809225 | 2.102042e-50 | -8.615850e-47 |
Msa0287410 | Msa0395750 | 0.810020 | 1.418517e-50 | -8.615850e-47 |
Msa0287870 | Msa0395750 | 0.845487 | 3.938153e-59 | -8.615850e-47 |
Msa0305410 | Msa0395750 | 0.841204 | 5.475867e-58 | -8.615850e-47 |
Msa0316390 | Msa0395750 | 0.837258 | 5.779767e-57 | -8.615850e-47 |
Msa0317940 | Msa0395750 | 0.813918 | 2.007062e-51 | -8.615850e-47 |
Msa0317960 | Msa0395750 | 0.829466 | 5.068010e-55 | -8.615850e-47 |
Msa0318680 | Msa0395750 | 0.801316 | 9.538833e-49 | -8.615850e-47 |
Msa0326750 | Msa0395750 | 0.807935 | 3.963166e-50 | -8.615850e-47 |
Msa0363790 | Msa0395750 | 0.827883 | 1.223430e-54 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0395750 | MtrunA17_Chr3g0081571 | 88.741 | 675 | 63 | 3 | 20 | 693 | 1 | 663 | 0.0 | 1192 |
Msa0395750 | MtrunA17_Chr3g0081541 | 47.401 | 654 | 228 | 20 | 135 | 693 | 1 | 633 | 1.25e-155 | 464 |
Msa0395750 | MtrunA17_Chr3g0131611 | 56.589 | 129 | 56 | 0 | 338 | 466 | 12 | 140 | 1.07e-46 | 173 |
Msa0395750 | MtrunA17_Chr4g0043691 | 44.000 | 125 | 67 | 1 | 342 | 463 | 19 | 143 | 1.40e-26 | 116 |
Msa0395750 | MtrunA17_Chr2g0311141 | 39.200 | 125 | 73 | 1 | 342 | 463 | 115 | 239 | 1.43e-19 | 92.8 |
Msa0395750 | MtrunA17_Chr7g0243491 | 31.429 | 175 | 111 | 2 | 307 | 475 | 3 | 174 | 2.90e-19 | 90.5 |
Msa0395750 | MtrunA17_Chr8g0388501 | 34.074 | 135 | 80 | 3 | 336 | 463 | 175 | 307 | 2.29e-15 | 77.8 |
Msa0395750 | MtrunA17_Chr3g0120061 | 33.333 | 135 | 81 | 3 | 336 | 463 | 184 | 316 | 1.57e-14 | 75.5 |
Msa0395750 | MtrunA17_Chr7g0225451 | 33.571 | 140 | 84 | 3 | 336 | 468 | 163 | 300 | 1.87e-14 | 74.7 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0395750 | AT2G32910.1 | 53.540 | 226 | 98 | 3 | 321 | 540 | 300 | 524 | 4.80e-60 | 214 |
Msa0395750 | AT5G61910.3 | 56.693 | 127 | 54 | 1 | 338 | 464 | 63 | 188 | 7.96e-40 | 157 |
Msa0395750 | AT5G61910.1 | 56.693 | 127 | 54 | 1 | 338 | 464 | 59 | 184 | 8.30e-40 | 157 |
Msa0395750 | AT5G61910.2 | 56.693 | 127 | 54 | 1 | 338 | 464 | 59 | 184 | 8.30e-40 | 157 |
Msa0395750 | AT5G61910.5 | 56.693 | 127 | 54 | 1 | 338 | 464 | 59 | 184 | 9.90e-40 | 156 |
Msa0395750 | AT5G61910.4 | 56.693 | 127 | 54 | 1 | 338 | 464 | 59 | 184 | 7.46e-38 | 152 |
Msa0395750 | AT2G35140.5 | 39.200 | 125 | 73 | 1 | 342 | 463 | 23 | 147 | 1.70e-20 | 97.1 |
Msa0395750 | AT2G35140.1 | 39.200 | 125 | 73 | 1 | 342 | 463 | 23 | 147 | 1.70e-20 | 97.1 |
Msa0395750 | AT2G35140.4 | 39.200 | 125 | 73 | 1 | 342 | 463 | 23 | 147 | 1.70e-20 | 97.1 |
Msa0395750 | AT2G35140.2 | 39.200 | 125 | 73 | 1 | 342 | 463 | 23 | 147 | 1.70e-20 | 97.1 |
Msa0395750 | AT2G35140.3 | 39.200 | 125 | 73 | 1 | 342 | 463 | 23 | 147 | 1.70e-20 | 97.1 |
Msa0395750 | AT2G35140.6 | 39.200 | 125 | 73 | 1 | 342 | 463 | 49 | 173 | 2.19e-20 | 96.7 |
Msa0395750 | AT3G11000.1 | 34.091 | 132 | 81 | 1 | 340 | 465 | 11 | 142 | 3.76e-18 | 88.6 |
Msa0395750 | AT3G11000.2 | 34.532 | 139 | 84 | 2 | 333 | 465 | 124 | 261 | 5.44e-17 | 85.5 |
Msa0395750 | AT5G01660.3 | 34.351 | 131 | 80 | 1 | 339 | 463 | 17 | 147 | 1.56e-16 | 83.6 |
Msa0395750 | AT5G01660.2 | 34.351 | 131 | 80 | 1 | 339 | 463 | 17 | 147 | 3.34e-16 | 83.2 |
Msa0395750 | AT5G01660.1 | 34.351 | 131 | 80 | 1 | 339 | 463 | 17 | 147 | 3.34e-16 | 83.2 |
Msa0395750 | AT5G42050.1 | 36.296 | 135 | 77 | 3 | 336 | 463 | 212 | 344 | 6.07e-16 | 80.5 |
Msa0395750 | AT3G27090.1 | 31.429 | 140 | 87 | 3 | 336 | 468 | 158 | 295 | 3.44e-12 | 68.2 |
Msa0395750 | AT3G27090.2 | 31.429 | 140 | 87 | 3 | 336 | 468 | 158 | 295 | 3.44e-12 | 68.2 |
Msa0395750 | AT3G27090.3 | 31.429 | 140 | 87 | 3 | 336 | 468 | 158 | 295 | 3.44e-12 | 68.2 |
Find 162 sgRNAs with CRISPR-Local
Find 416 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TTCACGGTCATTCAAATAAA+TGG | 0.124768 | 3_2:+12843929 | None:intergenic |
CTTTCTTGAATTATTGCTTT+TGG | 0.198180 | 3_2:+12844218 | None:intergenic |
CTTCTCATGTTAATCCTATA+AGG | 0.213380 | 3_2:-12844043 | Msa0395750:CDS |
CTCTCATAAGGTTCCCTTAT+AGG | 0.216544 | 3_2:+12844029 | None:intergenic |
GTTTACAAGGCTTCATCTTC+TGG | 0.233330 | 3_2:-12844644 | Msa0395750:CDS |
TCCCCGTGATTCATTTCTTT+TGG | 0.241748 | 3_2:-12844108 | Msa0395750:CDS |
CGTCCTTAGTTTCATTCTGC+TGG | 0.267103 | 3_2:+12845089 | None:intergenic |
GGGTGTTTCATCTGCTAAAA+AGG | 0.271160 | 3_2:-12844738 | Msa0395750:CDS |
GAAGCACAAGGAGTCAAATA+AGG | 0.272385 | 3_2:-12844903 | Msa0395750:CDS |
AAGCTTGAACCCCGAGCTTT+TGG | 0.280064 | 3_2:-12844614 | Msa0395750:CDS |
GGGAGGCTCCGGGTCGGGTC+AGG | 0.305230 | 3_2:-12844196 | Msa0395750:CDS |
CCCGATATGGCTGCACTTGA+TGG | 0.310834 | 3_2:+12843673 | None:intergenic |
TGATCGATGTTATGAGGATT+AGG | 0.312915 | 3_2:+12845472 | None:intergenic |
CTCCAAGCTCGTATTTGGTT+GGG | 0.316187 | 3_2:-12843794 | Msa0395750:CDS |
GCGATGGCCTCTCTACTTAA+AGG | 0.323048 | 3_2:+12843816 | None:intergenic |
TTCTTCTTGGCCTTAAGTTT+AGG | 0.327881 | 3_2:+12845223 | None:intergenic |
ATTGGACACTGAGCATAATA+TGG | 0.328449 | 3_2:-12845782 | Msa0395750:CDS |
TTAGGATTAGAAGAAAATTC+AGG | 0.330730 | 3_2:+12845490 | None:intergenic |
CATCGCTCCAAGCTCGTATT+TGG | 0.330783 | 3_2:-12843799 | Msa0395750:CDS |
TTAGGATTAGAAGAAAATTC+AGG | 0.331140 | 3_2:+12845379 | None:intergenic |
TTTGATCTGAAGCTGCTATA+TGG | 0.333261 | 3_2:-12844668 | Msa0395750:CDS |
GAGGCTCCGGGTCGGGTCAG+GGG | 0.355764 | 3_2:-12844194 | Msa0395750:CDS |
AGGAGTCAAATAAGGGTTCT+AGG | 0.356624 | 3_2:-12844895 | Msa0395750:CDS |
TCCAACTTGTCTCCCCGATA+TGG | 0.359947 | 3_2:+12843660 | None:intergenic |
CTCAATGAAGAAATGTTATT+CGG | 0.370457 | 3_2:+12843456 | None:intergenic |
CCATCAAGTGCAGCCATATC+GGG | 0.373653 | 3_2:-12843673 | Msa0395750:CDS |
AGGCATAACGATCATCTATA+TGG | 0.375161 | 3_2:+12843877 | None:intergenic |
TTCATCTAGGGATGCATACT+TGG | 0.377709 | 3_2:-12843841 | Msa0395750:CDS |
ACCATCAAGTGCAGCCATAT+CGG | 0.380439 | 3_2:-12843674 | Msa0395750:CDS |
TTGAAAATGCTTTCCGGTAG+CGG | 0.386260 | 3_2:+12844456 | None:intergenic |
GATCGTTATGCCTATCGATA+TGG | 0.392738 | 3_2:-12843867 | Msa0395750:CDS |
TCTTCTTGATCGATGTTATG+AGG | 0.392953 | 3_2:+12845466 | None:intergenic |
ATCTCTGGTTCCTAAACTTA+AGG | 0.404846 | 3_2:-12845233 | Msa0395750:CDS |
GGCTGCACTTGATGGTAATC+AGG | 0.406996 | 3_2:+12843681 | None:intergenic |
TTCTGATTCTTTCCCGCTAC+CGG | 0.412679 | 3_2:-12844469 | Msa0395750:CDS |
AGAAAGGGAGGCTCCGGGTC+GGG | 0.416722 | 3_2:-12844201 | Msa0395750:CDS |
ATTATTCTCAGTGCCAATCT+TGG | 0.418563 | 3_2:+12845747 | None:intergenic |
CGTAGACTTTCAACATGAAC+GGG | 0.420201 | 3_2:+12843960 | None:intergenic |
TCCAAGCTCGTATTTGGTTG+GGG | 0.425537 | 3_2:-12843793 | Msa0395750:CDS |
TCTGGTTTACCAGATCCTTC+AGG | 0.429526 | 3_2:+12845310 | None:intergenic |
ATCGATATGGTGCTTCATCT+AGG | 0.431246 | 3_2:-12843854 | Msa0395750:CDS |
TTCTCATGTTAATCCTATAA+GGG | 0.432079 | 3_2:-12844042 | Msa0395750:CDS |
CATAAATGCTTAGGTACCTC+TGG | 0.436726 | 3_2:-12843482 | Msa0395750:three_prime_UTR |
CACTGAGAATAATGTGGATC+AGG | 0.437810 | 3_2:-12845737 | Msa0395750:CDS |
AATTCAAGAAAGGGAGGCTC+CGG | 0.439056 | 3_2:-12844207 | Msa0395750:CDS |
GGAGGCTCCGGGTCGGGTCA+GGG | 0.441116 | 3_2:-12844195 | Msa0395750:CDS |
GTCCTTAGTTTCATTCTGCT+GGG | 0.445967 | 3_2:+12845090 | None:intergenic |
TCATCTCGTTACTCTTTCGC+TGG | 0.447405 | 3_2:-12843618 | Msa0395750:CDS |
TGATCAAGAAGAGAGCAAAT+TGG | 0.447851 | 3_2:-12845800 | Msa0395750:CDS |
GGAGAGAGATCGTTGAAGAT+AGG | 0.455533 | 3_2:-12843737 | Msa0395750:CDS |
TGAAAATGCTTTCCGGTAGC+GGG | 0.460509 | 3_2:+12844457 | None:intergenic |
TCCAACTGGTCGGAAAAGTC+TGG | 0.461710 | 3_2:+12844277 | None:intergenic |
CAAAAGCAATAATTCAAGAA+AGG | 0.463144 | 3_2:-12844217 | Msa0395750:CDS |
TGTTCATAATCTCTCTCATA+AGG | 0.464732 | 3_2:+12844017 | None:intergenic |
AAGTGAAGGTAAGTCAGAAT+AGG | 0.466413 | 3_2:-12845027 | Msa0395750:CDS |
TTTAAATGCTGTTTAATGTA+CGG | 0.467656 | 3_2:-12843432 | Msa0395750:three_prime_UTR |
GCTCCAAGCTCGTATTTGGT+TGG | 0.467700 | 3_2:-12843795 | Msa0395750:CDS |
AAACTTGCCACCAAAAGCTC+GGG | 0.468932 | 3_2:+12844604 | None:intergenic |
TGGTGGCAAGTTTCCTGCCC+AGG | 0.469476 | 3_2:-12844594 | Msa0395750:intron |
GCCATATCGGGGAGACAAGT+TGG | 0.470207 | 3_2:-12843661 | Msa0395750:CDS |
TCTATGAATCATAAATGCTT+AGG | 0.473948 | 3_2:-12843491 | Msa0395750:three_prime_UTR |
AACATGCAATTTGAATCCCT+TGG | 0.474513 | 3_2:-12843569 | Msa0395750:three_prime_UTR |
TTGTTTCCGCTATCGTGTCA+TGG | 0.475889 | 3_2:-12844759 | Msa0395750:CDS |
ACACGATAGCGGAAACAATC+AGG | 0.480874 | 3_2:+12844764 | None:intergenic |
GTTATGCTCAGTGGCCACTC+TGG | 0.482592 | 3_2:+12845669 | None:intergenic |
CATGAACGGGAACATTGCTT+TGG | 0.482998 | 3_2:+12843973 | None:intergenic |
AAAAGCAATAATTCAAGAAA+GGG | 0.484665 | 3_2:-12844216 | Msa0395750:CDS |
TTGTGAAGAAGAAAATAAAG+AGG | 0.484699 | 3_2:-12845183 | Msa0395750:CDS |
ACTCTTCCTCCTGAAGGATC+TGG | 0.486295 | 3_2:-12845319 | Msa0395750:CDS |
ATGTTATCAGTCCCGGCAAA+AGG | 0.487183 | 3_2:+12843765 | None:intergenic |
TCACGGTCATTCAAATAAAT+GGG | 0.488961 | 3_2:+12843930 | None:intergenic |
GATCAAGAAGAGGCCAAGAT+TGG | 0.492951 | 3_2:-12845760 | Msa0395750:CDS |
GAGTATAGCTCTGCTGTTCA+CGG | 0.493062 | 3_2:+12843913 | None:intergenic |
AGAGAGAGAGTAACCTGGGC+AGG | 0.493996 | 3_2:+12844581 | None:intergenic |
CTTTGGTAGCGAGGTTCCAC+AGG | 0.497366 | 3_2:+12843990 | None:intergenic |
CTCCAAAAGAAATGAATCAC+GGG | 0.498615 | 3_2:+12844106 | None:intergenic |
GATGTTCTACGGATCAAGCC+TGG | 0.501388 | 3_2:-12844713 | Msa0395750:CDS |
TTGCACATGGAAAGAGCTGT+TGG | 0.501730 | 3_2:-12844158 | Msa0395750:CDS |
ACTGCTGAATGAGCTCCAAC+TGG | 0.502972 | 3_2:+12844263 | None:intergenic |
AAGCACAAGGAGTCAAATAA+GGG | 0.505342 | 3_2:-12844902 | Msa0395750:CDS |
CCTTCGCATGTTATCAGTCC+CGG | 0.507344 | 3_2:+12843758 | None:intergenic |
CTTAAGGCCAAGAAGAAGAA+TGG | 0.510846 | 3_2:-12845217 | Msa0395750:CDS |
GAAACTTGCCACCAAAAGCT+CGG | 0.512639 | 3_2:+12844603 | None:intergenic |
TAACGATCATCTATATGGTC+AGG | 0.513759 | 3_2:+12843882 | None:intergenic |
TCCTATGGAGAAGAGTCATC+AGG | 0.514660 | 3_2:-12844987 | Msa0395750:CDS |
CAGTAATGACAAAAGTCCTA+TGG | 0.516763 | 3_2:-12845002 | Msa0395750:CDS |
GAAAGCTCTCACAATGCAGA+TGG | 0.517581 | 3_2:-12845133 | Msa0395750:CDS |
CGGGTCGGGTCAGGGGATCA+CGG | 0.520075 | 3_2:-12844187 | Msa0395750:CDS |
GATCAAGAAGAGAGCAAGAT+GGG | 0.525831 | 3_2:-12845415 | Msa0395750:CDS |
GATCAAGAAGAGAGCAAGAT+GGG | 0.525831 | 3_2:-12845526 | Msa0395750:CDS |
TAACATGAAAGATAGTCAAA+AGG | 0.528007 | 3_2:+12843538 | None:intergenic |
TACAAGGCTTCATCTTCTGG+TGG | 0.535343 | 3_2:-12844641 | Msa0395750:CDS |
AGATAAGGAGATCAATCTGT+TGG | 0.536087 | 3_2:-12844957 | Msa0395750:CDS |
CGTGATCCCCTGACCCGACC+CGG | 0.537666 | 3_2:+12844188 | None:intergenic |
ACTTGTGCAACAGTAAGTTC+TGG | 0.541360 | 3_2:+12844390 | None:intergenic |
AACTAAGGACGAACCACCTA+AGG | 0.542788 | 3_2:-12845077 | Msa0395750:CDS |
ACTTGAATCAAGAAGAGAGC+AGG | 0.543234 | 3_2:-12845609 | Msa0395750:CDS |
TGTTTCCGCTATCGTGTCAT+GGG | 0.543621 | 3_2:-12844758 | Msa0395750:CDS |
TCGATATGGTGCTTCATCTA+GGG | 0.543884 | 3_2:-12843853 | Msa0395750:CDS |
GCTGCTATATGGAGTTTACA+AGG | 0.546827 | 3_2:-12844657 | Msa0395750:CDS |
TACCCAGCAGAATGAAACTA+AGG | 0.548279 | 3_2:-12845092 | Msa0395750:CDS |
CAAATACGAGCTTGGAGCGA+TGG | 0.551621 | 3_2:+12843800 | None:intergenic |
GTAACCTTCTCACTCAACTC+TGG | 0.553426 | 3_2:+12845292 | None:intergenic |
TCGTAGACTTTCAACATGAA+CGG | 0.562675 | 3_2:+12843959 | None:intergenic |
GTTATGCTCAGTGACCATCT+TGG | 0.566913 | 3_2:+12845708 | None:intergenic |
GGTTACTCCACAATCATTGA+AGG | 0.568854 | 3_2:-12845275 | Msa0395750:CDS |
GGAACATTGCTTTGGTAGCG+AGG | 0.570176 | 3_2:+12843981 | None:intergenic |
AAGGATACTCTTCCTCCTGA+AGG | 0.571124 | 3_2:-12845325 | Msa0395750:CDS |
TTGATCCATGTTATGCTCAG+TGG | 0.571369 | 3_2:+12845660 | None:intergenic |
ATTCAAGAAAGGGAGGCTCC+GGG | 0.581550 | 3_2:-12844206 | Msa0395750:CDS |
CTTGGCTCCTTTAAGTAGAG+AGG | 0.581675 | 3_2:-12843823 | Msa0395750:CDS |
AGTCAGCGACGAGAATATGA+AGG | 0.582476 | 3_2:+12843594 | None:intergenic |
AAGAAAGGGAGGCTCCGGGT+CGG | 0.582964 | 3_2:-12844202 | Msa0395750:CDS |
GTCAAAAGGAAGACATGCCA+AGG | 0.583234 | 3_2:+12843552 | None:intergenic |
AAAGCTCTCACAATGCAGAT+GGG | 0.585921 | 3_2:-12845132 | Msa0395750:CDS |
TCCTGATGACTCTTCTCCAT+AGG | 0.586477 | 3_2:+12844986 | None:intergenic |
ACATCGATCAAGAAGAGAGT+AGG | 0.587941 | 3_2:-12845459 | Msa0395750:CDS |
ACATCGATCAAGAAGAGAGT+AGG | 0.587941 | 3_2:-12845570 | Msa0395750:CDS |
AGAAAATGATGACAACAAGA+AGG | 0.588292 | 3_2:-12845344 | Msa0395750:CDS |
TCTCCAAAAGAAATGAATCA+CGG | 0.589282 | 3_2:+12844105 | None:intergenic |
AGCAATAATTCAAGAAAGGG+AGG | 0.591340 | 3_2:-12844213 | Msa0395750:CDS |
AGATGAAGCACCATATCGAT+AGG | 0.598566 | 3_2:+12843857 | None:intergenic |
TGATCAAGAAGAGAGCAAGA+TGG | 0.599172 | 3_2:-12845416 | Msa0395750:CDS |
TGATCAAGAAGAGAGCAAGA+TGG | 0.599172 | 3_2:-12845527 | Msa0395750:CDS |
AGTGGCCACTGAGCATAACA+TGG | 0.601846 | 3_2:-12845665 | Msa0395750:CDS |
CGATCAAGAAGAGAGTAGGA+TGG | 0.603442 | 3_2:-12845455 | Msa0395750:CDS |
ATTATCGAGCTTATGATCGA+AGG | 0.604784 | 3_2:-12844079 | Msa0395750:CDS |
TAAAGAAAGAGCTTAAGTCC+AGG | 0.606025 | 3_2:+12844695 | None:intergenic |
GATCAAGAAGAGAACAAGAT+GGG | 0.607363 | 3_2:-12845643 | Msa0395750:CDS |
GATGGTCACTGAGCATAACA+TGG | 0.612089 | 3_2:-12845704 | Msa0395750:CDS |
AGCTTATGATCGAAGGAATG+TGG | 0.612129 | 3_2:-12844072 | Msa0395750:CDS |
GGCGGAAAACAATGAAGTGA+AGG | 0.613148 | 3_2:-12845041 | Msa0395750:CDS |
GGATCAAGAAGAGAACAAGA+TGG | 0.613905 | 3_2:-12845644 | Msa0395750:CDS |
CGATCAAGAAGAGAGTAGGA+TGG | 0.615486 | 3_2:-12845566 | Msa0395750:CDS |
TAACGAGATGAAACTCGTAA+AGG | 0.618460 | 3_2:+12843630 | None:intergenic |
GGTAGCGAGGTTCCACAGGA+CGG | 0.619158 | 3_2:+12843994 | None:intergenic |
CCAAGCTCGTATTTGGTTGG+GGG | 0.621734 | 3_2:-12843792 | Msa0395750:CDS |
CTGAATGAGCTCCAACTGGT+CGG | 0.623621 | 3_2:+12844267 | None:intergenic |
TTTCTTCTTCACAATCTTGG+GGG | 0.624109 | 3_2:+12845192 | None:intergenic |
TAAACCAGAGTTGAGTGAGA+AGG | 0.630738 | 3_2:-12845296 | Msa0395750:CDS |
TCATGTTGAAAGTCTACGAA+GGG | 0.632649 | 3_2:-12843955 | Msa0395750:CDS |
CATCAAGTGCAGCCATATCG+GGG | 0.640837 | 3_2:-12843672 | Msa0395750:CDS |
GATTGGCACTGAGAATAATG+TGG | 0.642695 | 3_2:-12845743 | Msa0395750:CDS |
ATCACGGCACAATTTGCACA+TGG | 0.646662 | 3_2:-12844171 | Msa0395750:CDS |
GCATAATATGGATCAAGAAG+AGG | 0.649102 | 3_2:-12845770 | Msa0395750:CDS |
GTCAGCGACGAGAATATGAA+GGG | 0.650249 | 3_2:+12843595 | None:intergenic |
GAAGAGTGAAGAGAAGCACA+AGG | 0.656543 | 3_2:-12844915 | Msa0395750:CDS |
AGATGAAACTCGTAAAGGTG+AGG | 0.658810 | 3_2:+12843635 | None:intergenic |
GAATCAAGAAGAGAGCAGGA+TGG | 0.659853 | 3_2:-12845605 | Msa0395750:CDS |
CCGGGACTGATAACATGCGA+AGG | 0.663098 | 3_2:-12843758 | Msa0395750:CDS |
AGATTATGAACACCGTCCTG+TGG | 0.665503 | 3_2:-12844006 | Msa0395750:CDS |
GGTTTACCAGATCCTTCAGG+AGG | 0.667297 | 3_2:+12845313 | None:intergenic |
TCAAAAGGAAGACATGCCAA+GGG | 0.670808 | 3_2:+12843553 | None:intergenic |
AACTTGCCACCAAAAGCTCG+GGG | 0.678427 | 3_2:+12844605 | None:intergenic |
TTCATGTTGAAAGTCTACGA+AGG | 0.679592 | 3_2:-12843956 | Msa0395750:CDS |
AAATGTTATTCGGAATCCAG+AGG | 0.684189 | 3_2:+12843466 | None:intergenic |
AGTCAAATAAGGGTTCTAGG+AGG | 0.684219 | 3_2:-12844892 | Msa0395750:CDS |
AAACACCCATGACACGATAG+CGG | 0.684982 | 3_2:+12844753 | None:intergenic |
ACATCAACTTGAGCGTCGAG+AGG | 0.689167 | 3_2:-12844135 | Msa0395750:CDS |
TCCAAAAGAAATGAATCACG+GGG | 0.690485 | 3_2:+12844107 | None:intergenic |
GGATCAGGAAGAGACCAAGA+TGG | 0.692400 | 3_2:-12845722 | Msa0395750:CDS |
GGATCAAGAAGAGTCCAGAG+TGG | 0.771185 | 3_2:-12845683 | Msa0395750:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AAAAATTGTTAAGAAATCTC+TGG | - | chr3_2:12843965-12843984 | Msa0395750:CDS | 20.0% |
!!! | GTTTTTTTATTGCTATATCA+TGG | - | chr3_2:12844875-12844894 | Msa0395750:CDS | 20.0% |
!! | AAAAGCAATAATTCAAGAAA+GGG | - | chr3_2:12844997-12845016 | Msa0395750:CDS | 20.0% |
!!! | TTTAAATGCTGTTTAATGTA+CGG | - | chr3_2:12845781-12845800 | Msa0395750:CDS | 20.0% |
!! | AAAAATTGTTAAGAAATCTC+TGG | - | chr3_2:12843965-12843984 | Msa0395750:CDS | 20.0% |
!!! | GTTTTTTTATTGCTATATCA+TGG | - | chr3_2:12844875-12844894 | Msa0395750:CDS | 20.0% |
!! | AAAAGCAATAATTCAAGAAA+GGG | - | chr3_2:12844997-12845016 | Msa0395750:CDS | 20.0% |
!!! | TTTAAATGCTGTTTAATGTA+CGG | - | chr3_2:12845781-12845800 | Msa0395750:CDS | 20.0% |
! | TTAGGATTAGAAGAAAATTC+AGG | + | chr3_2:12843726-12843745 | None:intergenic | 25.0% |
! | TTAGGATTAGAAGAAAATTC+AGG | + | chr3_2:12843726-12843745 | None:intergenic | 25.0% |
!! | ATTTTCTTCTTCACAATCTT+GGG | + | chr3_2:12844026-12844045 | None:intergenic | 25.0% |
!! | TATTTTCTTCTTCACAATCT+TGG | + | chr3_2:12844027-12844046 | None:intergenic | 25.0% |
! | TTGTGAAGAAGAAAATAAAG+AGG | - | chr3_2:12844030-12844049 | Msa0395750:CDS | 25.0% |
! | TAAAAAAACAGAAAACCAAG+AGG | + | chr3_2:12844864-12844883 | None:intergenic | 25.0% |
!! | CTTTCTTGAATTATTGCTTT+TGG | + | chr3_2:12844998-12845017 | None:intergenic | 25.0% |
! | CAAAAGCAATAATTCAAGAA+AGG | - | chr3_2:12844996-12845015 | Msa0395750:CDS | 25.0% |
! | TTCTCATGTTAATCCTATAA+GGG | - | chr3_2:12845171-12845190 | Msa0395750:CDS | 25.0% |
! | TAACATGAAAGATAGTCAAA+AGG | + | chr3_2:12845678-12845697 | None:intergenic | 25.0% |
! | TCTATGAATCATAAATGCTT+AGG | - | chr3_2:12845722-12845741 | Msa0395750:CDS | 25.0% |
! | CTCAATGAAGAAATGTTATT+CGG | + | chr3_2:12845760-12845779 | None:intergenic | 25.0% |
! | TTAGGATTAGAAGAAAATTC+AGG | + | chr3_2:12843726-12843745 | None:intergenic | 25.0% |
! | TTAGGATTAGAAGAAAATTC+AGG | + | chr3_2:12843726-12843745 | None:intergenic | 25.0% |
!! | ATTTTCTTCTTCACAATCTT+GGG | + | chr3_2:12844026-12844045 | None:intergenic | 25.0% |
!! | TATTTTCTTCTTCACAATCT+TGG | + | chr3_2:12844027-12844046 | None:intergenic | 25.0% |
! | TTGTGAAGAAGAAAATAAAG+AGG | - | chr3_2:12844030-12844049 | Msa0395750:CDS | 25.0% |
! | TAAAAAAACAGAAAACCAAG+AGG | + | chr3_2:12844864-12844883 | None:intergenic | 25.0% |
!! | CTTTCTTGAATTATTGCTTT+TGG | + | chr3_2:12844998-12845017 | None:intergenic | 25.0% |
! | CAAAAGCAATAATTCAAGAA+AGG | - | chr3_2:12844996-12845015 | Msa0395750:CDS | 25.0% |
! | TTCTCATGTTAATCCTATAA+GGG | - | chr3_2:12845171-12845190 | Msa0395750:CDS | 25.0% |
! | TAACATGAAAGATAGTCAAA+AGG | + | chr3_2:12845678-12845697 | None:intergenic | 25.0% |
! | TCTATGAATCATAAATGCTT+AGG | - | chr3_2:12845722-12845741 | Msa0395750:CDS | 25.0% |
! | CTCAATGAAGAAATGTTATT+CGG | + | chr3_2:12845760-12845779 | None:intergenic | 25.0% |
AGAAAATGATGACAACAAGA+AGG | - | chr3_2:12843869-12843888 | Msa0395750:CDS | 30.0% | |
!!! | TTTTTTGCCTTCAATGATTG+TGG | + | chr3_2:12843948-12843967 | None:intergenic | 30.0% |
! | TTTTCTTCTTCACAATCTTG+GGG | + | chr3_2:12844025-12844044 | None:intergenic | 30.0% |
AAGAGGAAGAACAAAAAAGT+AGG | - | chr3_2:12844047-12844066 | Msa0395750:CDS | 30.0% | |
TCATCAGGATGAAAAAGATA+AGG | - | chr3_2:12844241-12844260 | Msa0395750:CDS | 30.0% | |
AAAACCAAAAACAAGCCAAA+TGG | - | chr3_2:12844347-12844366 | Msa0395750:intron | 30.0% | |
!! | TCACTCTTTTTGTCATTTGA+TGG | + | chr3_2:12844386-12844405 | None:intergenic | 30.0% |
CTAAAAAGGATGATGTTCTA+CGG | - | chr3_2:12844489-12844508 | Msa0395750:CDS | 30.0% | |
!! | ATTTTGCTGTCTGTTTATTC+TGG | - | chr3_2:12844656-12844675 | Msa0395750:CDS | 30.0% |
!! | TGGTTGGTCTTTATTAATGA+TGG | - | chr3_2:12844676-12844695 | Msa0395750:CDS | 30.0% |
! | CATTTTCAAAAAGGCTATCA+AGG | - | chr3_2:12844771-12844790 | Msa0395750:CDS | 30.0% |
TCTCCAAAAGAAATGAATCA+CGG | + | chr3_2:12845111-12845130 | None:intergenic | 30.0% | |
CTTCTCATGTTAATCCTATA+AGG | - | chr3_2:12845170-12845189 | Msa0395750:CDS | 30.0% | |
TGTTCATAATCTCTCTCATA+AGG | + | chr3_2:12845199-12845218 | None:intergenic | 30.0% | |
TCACGGTCATTCAAATAAAT+GGG | + | chr3_2:12845286-12845305 | None:intergenic | 30.0% | |
TTCACGGTCATTCAAATAAA+TGG | + | chr3_2:12845287-12845306 | None:intergenic | 30.0% | |
AGAAAATGATGACAACAAGA+AGG | - | chr3_2:12843869-12843888 | Msa0395750:CDS | 30.0% | |
!!! | TTTTTTGCCTTCAATGATTG+TGG | + | chr3_2:12843948-12843967 | None:intergenic | 30.0% |
! | TTTTCTTCTTCACAATCTTG+GGG | + | chr3_2:12844025-12844044 | None:intergenic | 30.0% |
AAGAGGAAGAACAAAAAAGT+AGG | - | chr3_2:12844047-12844066 | Msa0395750:CDS | 30.0% | |
TCATCAGGATGAAAAAGATA+AGG | - | chr3_2:12844241-12844260 | Msa0395750:CDS | 30.0% | |
AAAACCAAAAACAAGCCAAA+TGG | - | chr3_2:12844347-12844366 | Msa0395750:intron | 30.0% | |
!! | TCACTCTTTTTGTCATTTGA+TGG | + | chr3_2:12844386-12844405 | None:intergenic | 30.0% |
CTAAAAAGGATGATGTTCTA+CGG | - | chr3_2:12844489-12844508 | Msa0395750:CDS | 30.0% | |
!! | ATTTTGCTGTCTGTTTATTC+TGG | - | chr3_2:12844656-12844675 | Msa0395750:CDS | 30.0% |
!! | TGGTTGGTCTTTATTAATGA+TGG | - | chr3_2:12844676-12844695 | Msa0395750:CDS | 30.0% |
! | CATTTTCAAAAAGGCTATCA+AGG | - | chr3_2:12844771-12844790 | Msa0395750:CDS | 30.0% |
TCTCCAAAAGAAATGAATCA+CGG | + | chr3_2:12845111-12845130 | None:intergenic | 30.0% | |
CTTCTCATGTTAATCCTATA+AGG | - | chr3_2:12845170-12845189 | Msa0395750:CDS | 30.0% | |
TGTTCATAATCTCTCTCATA+AGG | + | chr3_2:12845199-12845218 | None:intergenic | 30.0% | |
TCACGGTCATTCAAATAAAT+GGG | + | chr3_2:12845286-12845305 | None:intergenic | 30.0% | |
TTCACGGTCATTCAAATAAA+TGG | + | chr3_2:12845287-12845306 | None:intergenic | 30.0% | |
TGATCAAGAAGAGAGCAAAT+TGG | - | chr3_2:12843413-12843432 | Msa0395750:three_prime_UTR | 35.0% | |
ATTGGACACTGAGCATAATA+TGG | - | chr3_2:12843431-12843450 | Msa0395750:three_prime_UTR | 35.0% | |
GCATAATATGGATCAAGAAG+AGG | - | chr3_2:12843443-12843462 | Msa0395750:three_prime_UTR | 35.0% | |
ATTATTCTCAGTGCCAATCT+TGG | + | chr3_2:12843469-12843488 | None:intergenic | 35.0% | |
GATCAAGAAGAGAACAAGAT+GGG | - | chr3_2:12843570-12843589 | Msa0395750:three_prime_UTR | 35.0% | |
TGATCGATGTTATGAGGATT+AGG | + | chr3_2:12843744-12843763 | None:intergenic | 35.0% | |
TCTTCTTGATCGATGTTATG+AGG | + | chr3_2:12843639-12843658 | None:intergenic | 35.0% | |
! | CATCATTTTCTGATGACTGA+GGG | + | chr3_2:12843860-12843879 | None:intergenic | 35.0% |
! | TCATCATTTTCTGATGACTG+AGG | + | chr3_2:12843861-12843880 | None:intergenic | 35.0% |
! | ATCTCTGGTTCCTAAACTTA+AGG | - | chr3_2:12843980-12843999 | Msa0395750:CDS | 35.0% |
!! | TTCTTCTTGGCCTTAAGTTT+AGG | + | chr3_2:12843993-12844012 | None:intergenic | 35.0% |
TTTCTTCTTCACAATCTTGG+GGG | + | chr3_2:12844024-12844043 | None:intergenic | 35.0% | |
AAGTGAAGGTAAGTCAGAAT+AGG | - | chr3_2:12844186-12844205 | Msa0395750:CDS | 35.0% | |
CAGTAATGACAAAAGTCCTA+TGG | - | chr3_2:12844211-12844230 | Msa0395750:CDS | 35.0% | |
AGATAAGGAGATCAATCTGT+TGG | - | chr3_2:12844256-12844275 | Msa0395750:CDS | 35.0% | |
AAGCACAAGGAGTCAAATAA+GGG | - | chr3_2:12844311-12844330 | Msa0395750:intron | 35.0% | |
GACAAAAAGAGTGAAAAGCT+TGG | - | chr3_2:12844392-12844411 | Msa0395750:CDS | 35.0% | |
AAAAAGAGTGAAAAGCTTGG+TGG | - | chr3_2:12844395-12844414 | Msa0395750:CDS | 35.0% | |
TAAAGAAAGAGCTTAAGTCC+AGG | + | chr3_2:12844521-12844540 | None:intergenic | 35.0% | |
! | TTTGATCTGAAGCTGCTATA+TGG | - | chr3_2:12844545-12844564 | Msa0395750:intron | 35.0% |
AATAAGAGAGAGAGTAACCT+GGG | + | chr3_2:12844639-12844658 | None:intergenic | 35.0% | |
AAATAAGAGAGAGAGTAACC+TGG | + | chr3_2:12844640-12844659 | None:intergenic | 35.0% | |
!!! | ACCGGAAAGCATTTTCAAAA+AGG | - | chr3_2:12844762-12844781 | Msa0395750:CDS | 35.0% |
!! | GCCTTTTTGAAAATGCTTTC+CGG | + | chr3_2:12844766-12844785 | None:intergenic | 35.0% |
GAGAATCAAATGTTACCTCT+TGG | - | chr3_2:12844846-12844865 | Msa0395750:CDS | 35.0% | |
ATATTCAAATGTTCTGCTCC+AGG | - | chr3_2:12844901-12844920 | Msa0395750:CDS | 35.0% | |
! | GCTTTTGGATGAGAAAAAAC+AGG | + | chr3_2:12844983-12845002 | None:intergenic | 35.0% |
AGCAATAATTCAAGAAAGGG+AGG | - | chr3_2:12845000-12845019 | Msa0395750:CDS | 35.0% | |
TCCAAAAGAAATGAATCACG+GGG | + | chr3_2:12845109-12845128 | None:intergenic | 35.0% | |
CTCCAAAAGAAATGAATCAC+GGG | + | chr3_2:12845110-12845129 | None:intergenic | 35.0% | |
ATTATCGAGCTTATGATCGA+AGG | - | chr3_2:12845134-12845153 | Msa0395750:CDS | 35.0% | |
TCGTAGACTTTCAACATGAA+CGG | + | chr3_2:12845257-12845276 | None:intergenic | 35.0% | |
TTCATGTTGAAAGTCTACGA+AGG | - | chr3_2:12845257-12845276 | Msa0395750:CDS | 35.0% | |
TCATGTTGAAAGTCTACGAA+GGG | - | chr3_2:12845258-12845277 | Msa0395750:CDS | 35.0% | |
TAACGATCATCTATATGGTC+AGG | + | chr3_2:12845334-12845353 | None:intergenic | 35.0% | |
AGGCATAACGATCATCTATA+TGG | + | chr3_2:12845339-12845358 | None:intergenic | 35.0% | |
TAACGAGATGAAACTCGTAA+AGG | + | chr3_2:12845586-12845605 | None:intergenic | 35.0% | |
AACATGCAATTTGAATCCCT+TGG | - | chr3_2:12845644-12845663 | Msa0395750:CDS | 35.0% | |
AAATGTTATTCGGAATCCAG+AGG | + | chr3_2:12845750-12845769 | None:intergenic | 35.0% | |
TGATCAAGAAGAGAGCAAAT+TGG | - | chr3_2:12843413-12843432 | Msa0395750:three_prime_UTR | 35.0% | |
ATTGGACACTGAGCATAATA+TGG | - | chr3_2:12843431-12843450 | Msa0395750:three_prime_UTR | 35.0% | |
GCATAATATGGATCAAGAAG+AGG | - | chr3_2:12843443-12843462 | Msa0395750:three_prime_UTR | 35.0% | |
ATTATTCTCAGTGCCAATCT+TGG | + | chr3_2:12843469-12843488 | None:intergenic | 35.0% | |
GATCAAGAAGAGAACAAGAT+GGG | - | chr3_2:12843570-12843589 | Msa0395750:three_prime_UTR | 35.0% | |
TGATCGATGTTATGAGGATT+AGG | + | chr3_2:12843744-12843763 | None:intergenic | 35.0% | |
TCTTCTTGATCGATGTTATG+AGG | + | chr3_2:12843639-12843658 | None:intergenic | 35.0% | |
! | CATCATTTTCTGATGACTGA+GGG | + | chr3_2:12843860-12843879 | None:intergenic | 35.0% |
! | TCATCATTTTCTGATGACTG+AGG | + | chr3_2:12843861-12843880 | None:intergenic | 35.0% |
! | ATCTCTGGTTCCTAAACTTA+AGG | - | chr3_2:12843980-12843999 | Msa0395750:CDS | 35.0% |
!! | TTCTTCTTGGCCTTAAGTTT+AGG | + | chr3_2:12843993-12844012 | None:intergenic | 35.0% |
TTTCTTCTTCACAATCTTGG+GGG | + | chr3_2:12844024-12844043 | None:intergenic | 35.0% | |
AAGTGAAGGTAAGTCAGAAT+AGG | - | chr3_2:12844186-12844205 | Msa0395750:CDS | 35.0% | |
CAGTAATGACAAAAGTCCTA+TGG | - | chr3_2:12844211-12844230 | Msa0395750:CDS | 35.0% | |
AGATAAGGAGATCAATCTGT+TGG | - | chr3_2:12844256-12844275 | Msa0395750:CDS | 35.0% | |
AAGCACAAGGAGTCAAATAA+GGG | - | chr3_2:12844311-12844330 | Msa0395750:intron | 35.0% | |
GACAAAAAGAGTGAAAAGCT+TGG | - | chr3_2:12844392-12844411 | Msa0395750:CDS | 35.0% | |
AAAAAGAGTGAAAAGCTTGG+TGG | - | chr3_2:12844395-12844414 | Msa0395750:CDS | 35.0% | |
TAAAGAAAGAGCTTAAGTCC+AGG | + | chr3_2:12844521-12844540 | None:intergenic | 35.0% | |
! | TTTGATCTGAAGCTGCTATA+TGG | - | chr3_2:12844545-12844564 | Msa0395750:intron | 35.0% |
AATAAGAGAGAGAGTAACCT+GGG | + | chr3_2:12844639-12844658 | None:intergenic | 35.0% | |
AAATAAGAGAGAGAGTAACC+TGG | + | chr3_2:12844640-12844659 | None:intergenic | 35.0% | |
!!! | ACCGGAAAGCATTTTCAAAA+AGG | - | chr3_2:12844762-12844781 | Msa0395750:CDS | 35.0% |
!! | GCCTTTTTGAAAATGCTTTC+CGG | + | chr3_2:12844766-12844785 | None:intergenic | 35.0% |
GAGAATCAAATGTTACCTCT+TGG | - | chr3_2:12844846-12844865 | Msa0395750:CDS | 35.0% | |
ATATTCAAATGTTCTGCTCC+AGG | - | chr3_2:12844901-12844920 | Msa0395750:CDS | 35.0% | |
! | GCTTTTGGATGAGAAAAAAC+AGG | + | chr3_2:12844983-12845002 | None:intergenic | 35.0% |
AGCAATAATTCAAGAAAGGG+AGG | - | chr3_2:12845000-12845019 | Msa0395750:CDS | 35.0% | |
TCCAAAAGAAATGAATCACG+GGG | + | chr3_2:12845109-12845128 | None:intergenic | 35.0% | |
CTCCAAAAGAAATGAATCAC+GGG | + | chr3_2:12845110-12845129 | None:intergenic | 35.0% | |
ATTATCGAGCTTATGATCGA+AGG | - | chr3_2:12845134-12845153 | Msa0395750:CDS | 35.0% | |
TCGTAGACTTTCAACATGAA+CGG | + | chr3_2:12845257-12845276 | None:intergenic | 35.0% | |
TTCATGTTGAAAGTCTACGA+AGG | - | chr3_2:12845257-12845276 | Msa0395750:CDS | 35.0% | |
TCATGTTGAAAGTCTACGAA+GGG | - | chr3_2:12845258-12845277 | Msa0395750:CDS | 35.0% | |
TAACGATCATCTATATGGTC+AGG | + | chr3_2:12845334-12845353 | None:intergenic | 35.0% | |
AGGCATAACGATCATCTATA+TGG | + | chr3_2:12845339-12845358 | None:intergenic | 35.0% | |
TAACGAGATGAAACTCGTAA+AGG | + | chr3_2:12845586-12845605 | None:intergenic | 35.0% | |
AACATGCAATTTGAATCCCT+TGG | - | chr3_2:12845644-12845663 | Msa0395750:CDS | 35.0% | |
AAATGTTATTCGGAATCCAG+AGG | + | chr3_2:12845750-12845769 | None:intergenic | 35.0% | |
! | GATTGGCACTGAGAATAATG+TGG | - | chr3_2:12843470-12843489 | Msa0395750:three_prime_UTR | 40.0% |
CACTGAGAATAATGTGGATC+AGG | - | chr3_2:12843476-12843495 | Msa0395750:three_prime_UTR | 40.0% | |
TTGATCCATGTTATGCTCAG+TGG | + | chr3_2:12843517-12843536 | None:intergenic | 40.0% | |
GGATCAAGAAGAGAACAAGA+TGG | - | chr3_2:12843569-12843588 | Msa0395750:three_prime_UTR | 40.0% | |
ACTTGAATCAAGAAGAGAGC+AGG | - | chr3_2:12843604-12843623 | Msa0395750:CDS | 40.0% | |
ACATCGATCAAGAAGAGAGT+AGG | - | chr3_2:12843643-12843662 | Msa0395750:CDS | 40.0% | |
TGATCAAGAAGAGAGCAAGA+TGG | - | chr3_2:12843686-12843705 | Msa0395750:CDS | 40.0% | |
GATCAAGAAGAGAGCAAGAT+GGG | - | chr3_2:12843687-12843706 | Msa0395750:CDS | 40.0% | |
ACATCGATCAAGAAGAGAGT+AGG | - | chr3_2:12843643-12843662 | Msa0395750:CDS | 40.0% | |
TGATCAAGAAGAGAGCAAGA+TGG | - | chr3_2:12843686-12843705 | Msa0395750:CDS | 40.0% | |
GATCAAGAAGAGAGCAAGAT+GGG | - | chr3_2:12843687-12843706 | Msa0395750:CDS | 40.0% | |
! | TTTTCTGATGACTGAGGGTT+AGG | + | chr3_2:12843855-12843874 | None:intergenic | 40.0% |
TAAACCAGAGTTGAGTGAGA+AGG | - | chr3_2:12843917-12843936 | Msa0395750:CDS | 40.0% | |
GGTTACTCCACAATCATTGA+AGG | - | chr3_2:12843938-12843957 | Msa0395750:CDS | 40.0% | |
CTTAAGGCCAAGAAGAAGAA+TGG | - | chr3_2:12843996-12844015 | Msa0395750:CDS | 40.0% | |
AAAGCTCTCACAATGCAGAT+GGG | - | chr3_2:12844081-12844100 | Msa0395750:CDS | 40.0% | |
TACCCAGCAGAATGAAACTA+AGG | - | chr3_2:12844121-12844140 | Msa0395750:CDS | 40.0% | |
GTCCTTAGTTTCATTCTGCT+GGG | + | chr3_2:12844126-12844145 | None:intergenic | 40.0% | |
ACCACCTAAGGAGAAAAATC+AGG | - | chr3_2:12844148-12844167 | Msa0395750:CDS | 40.0% | |
! | TCCTGATTTTTCTCCTTAGG+TGG | + | chr3_2:12844152-12844171 | None:intergenic | 40.0% |
ACCTAAGGAGAAAAATCAGG+AGG | - | chr3_2:12844151-12844170 | Msa0395750:CDS | 40.0% | |
TAAGGAGAAAAATCAGGAGG+CGG | - | chr3_2:12844154-12844173 | Msa0395750:CDS | 40.0% | |
GAAGCACAAGGAGTCAAATA+AGG | - | chr3_2:12844310-12844329 | Msa0395750:intron | 40.0% | |
AGGAGTCAAATAAGGGTTCT+AGG | - | chr3_2:12844318-12844337 | Msa0395750:intron | 40.0% | |
!! | AGTCAAATAAGGGTTCTAGG+AGG | - | chr3_2:12844321-12844340 | Msa0395750:intron | 40.0% |
CAAAAACAAGCCAAATGGCA+CGG | - | chr3_2:12844352-12844371 | Msa0395750:intron | 40.0% | |
GGGTGTTTCATCTGCTAAAA+AGG | - | chr3_2:12844475-12844494 | Msa0395750:CDS | 40.0% | |
GCTGCTATATGGAGTTTACA+AGG | - | chr3_2:12844556-12844575 | Msa0395750:intron | 40.0% | |
GTTTACAAGGCTTCATCTTC+TGG | - | chr3_2:12844569-12844588 | Msa0395750:intron | 40.0% | |
TGCTGTCTGTTTATTCTGGT+TGG | - | chr3_2:12844660-12844679 | Msa0395750:CDS | 40.0% | |
TTGAAAATGCTTTCCGGTAG+CGG | + | chr3_2:12844760-12844779 | None:intergenic | 40.0% | |
ACTTGTGCAACAGTAAGTTC+TGG | + | chr3_2:12844826-12844845 | None:intergenic | 40.0% | |
! | TCCCCGTGATTCATTTCTTT+TGG | - | chr3_2:12845105-12845124 | Msa0395750:CDS | 40.0% |
AGCTTATGATCGAAGGAATG+TGG | - | chr3_2:12845141-12845160 | Msa0395750:CDS | 40.0% | |
CTCTCATAAGGTTCCCTTAT+AGG | + | chr3_2:12845187-12845206 | None:intergenic | 40.0% | |
CGTAGACTTTCAACATGAAC+GGG | + | chr3_2:12845256-12845275 | None:intergenic | 40.0% | |
GATCGTTATGCCTATCGATA+TGG | - | chr3_2:12845346-12845365 | Msa0395750:CDS | 40.0% | |
! | AGATGAAGCACCATATCGAT+AGG | + | chr3_2:12845359-12845378 | None:intergenic | 40.0% |
ATCGATATGGTGCTTCATCT+AGG | - | chr3_2:12845359-12845378 | Msa0395750:CDS | 40.0% | |
TCGATATGGTGCTTCATCTA+GGG | - | chr3_2:12845360-12845379 | Msa0395750:CDS | 40.0% | |
TTCATCTAGGGATGCATACT+TGG | - | chr3_2:12845372-12845391 | Msa0395750:CDS | 40.0% | |
AGATGAAACTCGTAAAGGTG+AGG | + | chr3_2:12845581-12845600 | None:intergenic | 40.0% | |
TCAAAAGGAAGACATGCCAA+GGG | + | chr3_2:12845663-12845682 | None:intergenic | 40.0% | |
CATAAATGCTTAGGTACCTC+TGG | - | chr3_2:12845731-12845750 | Msa0395750:CDS | 40.0% | |
! | GATTGGCACTGAGAATAATG+TGG | - | chr3_2:12843470-12843489 | Msa0395750:three_prime_UTR | 40.0% |
CACTGAGAATAATGTGGATC+AGG | - | chr3_2:12843476-12843495 | Msa0395750:three_prime_UTR | 40.0% | |
TTGATCCATGTTATGCTCAG+TGG | + | chr3_2:12843517-12843536 | None:intergenic | 40.0% | |
GGATCAAGAAGAGAACAAGA+TGG | - | chr3_2:12843569-12843588 | Msa0395750:three_prime_UTR | 40.0% | |
ACTTGAATCAAGAAGAGAGC+AGG | - | chr3_2:12843604-12843623 | Msa0395750:CDS | 40.0% | |
ACATCGATCAAGAAGAGAGT+AGG | - | chr3_2:12843643-12843662 | Msa0395750:CDS | 40.0% | |
TGATCAAGAAGAGAGCAAGA+TGG | - | chr3_2:12843686-12843705 | Msa0395750:CDS | 40.0% | |
GATCAAGAAGAGAGCAAGAT+GGG | - | chr3_2:12843687-12843706 | Msa0395750:CDS | 40.0% | |
ACATCGATCAAGAAGAGAGT+AGG | - | chr3_2:12843643-12843662 | Msa0395750:CDS | 40.0% | |
TGATCAAGAAGAGAGCAAGA+TGG | - | chr3_2:12843686-12843705 | Msa0395750:CDS | 40.0% | |
GATCAAGAAGAGAGCAAGAT+GGG | - | chr3_2:12843687-12843706 | Msa0395750:CDS | 40.0% | |
! | TTTTCTGATGACTGAGGGTT+AGG | + | chr3_2:12843855-12843874 | None:intergenic | 40.0% |
TAAACCAGAGTTGAGTGAGA+AGG | - | chr3_2:12843917-12843936 | Msa0395750:CDS | 40.0% | |
GGTTACTCCACAATCATTGA+AGG | - | chr3_2:12843938-12843957 | Msa0395750:CDS | 40.0% | |
CTTAAGGCCAAGAAGAAGAA+TGG | - | chr3_2:12843996-12844015 | Msa0395750:CDS | 40.0% | |
AAAGCTCTCACAATGCAGAT+GGG | - | chr3_2:12844081-12844100 | Msa0395750:CDS | 40.0% | |
TACCCAGCAGAATGAAACTA+AGG | - | chr3_2:12844121-12844140 | Msa0395750:CDS | 40.0% | |
GTCCTTAGTTTCATTCTGCT+GGG | + | chr3_2:12844126-12844145 | None:intergenic | 40.0% | |
ACCACCTAAGGAGAAAAATC+AGG | - | chr3_2:12844148-12844167 | Msa0395750:CDS | 40.0% | |
! | TCCTGATTTTTCTCCTTAGG+TGG | + | chr3_2:12844152-12844171 | None:intergenic | 40.0% |
ACCTAAGGAGAAAAATCAGG+AGG | - | chr3_2:12844151-12844170 | Msa0395750:CDS | 40.0% | |
TAAGGAGAAAAATCAGGAGG+CGG | - | chr3_2:12844154-12844173 | Msa0395750:CDS | 40.0% | |
GAAGCACAAGGAGTCAAATA+AGG | - | chr3_2:12844310-12844329 | Msa0395750:intron | 40.0% | |
AGGAGTCAAATAAGGGTTCT+AGG | - | chr3_2:12844318-12844337 | Msa0395750:intron | 40.0% | |
!! | AGTCAAATAAGGGTTCTAGG+AGG | - | chr3_2:12844321-12844340 | Msa0395750:intron | 40.0% |
CAAAAACAAGCCAAATGGCA+CGG | - | chr3_2:12844352-12844371 | Msa0395750:intron | 40.0% | |
GGGTGTTTCATCTGCTAAAA+AGG | - | chr3_2:12844475-12844494 | Msa0395750:CDS | 40.0% | |
GCTGCTATATGGAGTTTACA+AGG | - | chr3_2:12844556-12844575 | Msa0395750:intron | 40.0% | |
GTTTACAAGGCTTCATCTTC+TGG | - | chr3_2:12844569-12844588 | Msa0395750:intron | 40.0% | |
TGCTGTCTGTTTATTCTGGT+TGG | - | chr3_2:12844660-12844679 | Msa0395750:CDS | 40.0% | |
TTGAAAATGCTTTCCGGTAG+CGG | + | chr3_2:12844760-12844779 | None:intergenic | 40.0% | |
ACTTGTGCAACAGTAAGTTC+TGG | + | chr3_2:12844826-12844845 | None:intergenic | 40.0% | |
! | TCCCCGTGATTCATTTCTTT+TGG | - | chr3_2:12845105-12845124 | Msa0395750:CDS | 40.0% |
AGCTTATGATCGAAGGAATG+TGG | - | chr3_2:12845141-12845160 | Msa0395750:CDS | 40.0% | |
CTCTCATAAGGTTCCCTTAT+AGG | + | chr3_2:12845187-12845206 | None:intergenic | 40.0% | |
CGTAGACTTTCAACATGAAC+GGG | + | chr3_2:12845256-12845275 | None:intergenic | 40.0% | |
GATCGTTATGCCTATCGATA+TGG | - | chr3_2:12845346-12845365 | Msa0395750:CDS | 40.0% | |
! | AGATGAAGCACCATATCGAT+AGG | + | chr3_2:12845359-12845378 | None:intergenic | 40.0% |
ATCGATATGGTGCTTCATCT+AGG | - | chr3_2:12845359-12845378 | Msa0395750:CDS | 40.0% | |
TCGATATGGTGCTTCATCTA+GGG | - | chr3_2:12845360-12845379 | Msa0395750:CDS | 40.0% | |
TTCATCTAGGGATGCATACT+TGG | - | chr3_2:12845372-12845391 | Msa0395750:CDS | 40.0% | |
AGATGAAACTCGTAAAGGTG+AGG | + | chr3_2:12845581-12845600 | None:intergenic | 40.0% | |
TCAAAAGGAAGACATGCCAA+GGG | + | chr3_2:12845663-12845682 | None:intergenic | 40.0% | |
CATAAATGCTTAGGTACCTC+TGG | - | chr3_2:12845731-12845750 | Msa0395750:CDS | 40.0% | |
GATCAAGAAGAGGCCAAGAT+TGG | - | chr3_2:12843453-12843472 | Msa0395750:three_prime_UTR | 45.0% | |
GTTATGCTCAGTGACCATCT+TGG | + | chr3_2:12843508-12843527 | None:intergenic | 45.0% | |
GATGGTCACTGAGCATAACA+TGG | - | chr3_2:12843509-12843528 | Msa0395750:three_prime_UTR | 45.0% | |
GAATCAAGAAGAGAGCAGGA+TGG | - | chr3_2:12843608-12843627 | Msa0395750:CDS | 45.0% | |
CGATCAAGAAGAGAGTAGGA+TGG | - | chr3_2:12843647-12843666 | Msa0395750:CDS | 45.0% | |
CGATCAAGAAGAGAGTAGGA+TGG | - | chr3_2:12843647-12843666 | Msa0395750:CDS | 45.0% | |
AAGGATACTCTTCCTCCTGA+AGG | - | chr3_2:12843888-12843907 | Msa0395750:CDS | 45.0% | |
! | TCTGGTTTACCAGATCCTTC+AGG | + | chr3_2:12843906-12843925 | None:intergenic | 45.0% |
GTAACCTTCTCACTCAACTC+TGG | + | chr3_2:12843924-12843943 | None:intergenic | 45.0% | |
GAAAGCTCTCACAATGCAGA+TGG | - | chr3_2:12844080-12844099 | Msa0395750:CDS | 45.0% | |
CGTCCTTAGTTTCATTCTGC+TGG | + | chr3_2:12844127-12844146 | None:intergenic | 45.0% | |
AACTAAGGACGAACCACCTA+AGG | - | chr3_2:12844136-12844155 | Msa0395750:CDS | 45.0% | |
! | GCCTCCTGATTTTTCTCCTT+AGG | + | chr3_2:12844155-12844174 | None:intergenic | 45.0% |
GGCGGAAAACAATGAAGTGA+AGG | - | chr3_2:12844172-12844191 | Msa0395750:CDS | 45.0% | |
TCCTATGGAGAAGAGTCATC+AGG | - | chr3_2:12844226-12844245 | Msa0395750:CDS | 45.0% | |
TCCTGATGACTCTTCTCCAT+AGG | + | chr3_2:12844230-12844249 | None:intergenic | 45.0% | |
! | GAAGAGTGAAGAGAAGCACA+AGG | - | chr3_2:12844298-12844317 | Msa0395750:intron | 45.0% |
!!! | CGTGCCATTTGGCTTGTTTT+TGG | + | chr3_2:12844354-12844373 | None:intergenic | 45.0% |
!! | ACACGATAGCGGAAACAATC+AGG | + | chr3_2:12844452-12844471 | None:intergenic | 45.0% |
TTGTTTCCGCTATCGTGTCA+TGG | - | chr3_2:12844454-12844473 | Msa0395750:CDS | 45.0% | |
TGTTTCCGCTATCGTGTCAT+GGG | - | chr3_2:12844455-12844474 | Msa0395750:CDS | 45.0% | |
AAACACCCATGACACGATAG+CGG | + | chr3_2:12844463-12844482 | None:intergenic | 45.0% | |
TACAAGGCTTCATCTTCTGG+TGG | - | chr3_2:12844572-12844591 | Msa0395750:intron | 45.0% | |
AAACTTGCCACCAAAAGCTC+GGG | + | chr3_2:12844612-12844631 | None:intergenic | 45.0% | |
GAAACTTGCCACCAAAAGCT+CGG | + | chr3_2:12844613-12844632 | None:intergenic | 45.0% | |
TGCTGATAGCTGATGACTTC+AGG | - | chr3_2:12844705-12844724 | Msa0395750:CDS | 45.0% | |
ATAGCTGATGACTTCAGGTG+CGG | - | chr3_2:12844710-12844729 | Msa0395750:CDS | 45.0% | |
TTCTGATTCTTTCCCGCTAC+CGG | - | chr3_2:12844744-12844763 | Msa0395750:CDS | 45.0% | |
TGAAAATGCTTTCCGGTAGC+GGG | + | chr3_2:12844759-12844778 | None:intergenic | 45.0% | |
CAAATGTTCTGCTCCAGGTT+AGG | - | chr3_2:12844906-12844925 | Msa0395750:CDS | 45.0% | |
AATTCAAGAAAGGGAGGCTC+CGG | - | chr3_2:12845006-12845025 | Msa0395750:CDS | 45.0% | |
ATCACGGCACAATTTGCACA+TGG | - | chr3_2:12845042-12845061 | Msa0395750:CDS | 45.0% | |
TTGCACATGGAAAGAGCTGT+TGG | - | chr3_2:12845055-12845074 | Msa0395750:CDS | 45.0% | |
AGATTATGAACACCGTCCTG+TGG | - | chr3_2:12845207-12845226 | Msa0395750:CDS | 45.0% | |
CATGAACGGGAACATTGCTT+TGG | + | chr3_2:12845243-12845262 | None:intergenic | 45.0% | |
! | GAGTATAGCTCTGCTGTTCA+CGG | + | chr3_2:12845303-12845322 | None:intergenic | 45.0% |
CTTGGCTCCTTTAAGTAGAG+AGG | - | chr3_2:12845390-12845409 | Msa0395750:CDS | 45.0% | |
CTCCAAGCTCGTATTTGGTT+GGG | - | chr3_2:12845419-12845438 | Msa0395750:CDS | 45.0% | |
TCCAAGCTCGTATTTGGTTG+GGG | - | chr3_2:12845420-12845439 | Msa0395750:CDS | 45.0% | |
ATGTTATCAGTCCCGGCAAA+AGG | + | chr3_2:12845451-12845470 | None:intergenic | 45.0% | |
GGAGAGAGATCGTTGAAGAT+AGG | - | chr3_2:12845476-12845495 | Msa0395750:CDS | 45.0% | |
ACCATCAAGTGCAGCCATAT+CGG | - | chr3_2:12845539-12845558 | Msa0395750:CDS | 45.0% | |
TCATCTCGTTACTCTTTCGC+TGG | - | chr3_2:12845595-12845614 | Msa0395750:CDS | 45.0% | |
GTCAGCGACGAGAATATGAA+GGG | + | chr3_2:12845621-12845640 | None:intergenic | 45.0% | |
AGTCAGCGACGAGAATATGA+AGG | + | chr3_2:12845622-12845641 | None:intergenic | 45.0% | |
GTCAAAAGGAAGACATGCCA+AGG | + | chr3_2:12845664-12845683 | None:intergenic | 45.0% | |
GATCAAGAAGAGGCCAAGAT+TGG | - | chr3_2:12843453-12843472 | Msa0395750:three_prime_UTR | 45.0% | |
GTTATGCTCAGTGACCATCT+TGG | + | chr3_2:12843508-12843527 | None:intergenic | 45.0% | |
GATGGTCACTGAGCATAACA+TGG | - | chr3_2:12843509-12843528 | Msa0395750:three_prime_UTR | 45.0% | |
GAATCAAGAAGAGAGCAGGA+TGG | - | chr3_2:12843608-12843627 | Msa0395750:CDS | 45.0% | |
CGATCAAGAAGAGAGTAGGA+TGG | - | chr3_2:12843647-12843666 | Msa0395750:CDS | 45.0% | |
CGATCAAGAAGAGAGTAGGA+TGG | - | chr3_2:12843647-12843666 | Msa0395750:CDS | 45.0% | |
AAGGATACTCTTCCTCCTGA+AGG | - | chr3_2:12843888-12843907 | Msa0395750:CDS | 45.0% | |
! | TCTGGTTTACCAGATCCTTC+AGG | + | chr3_2:12843906-12843925 | None:intergenic | 45.0% |
GTAACCTTCTCACTCAACTC+TGG | + | chr3_2:12843924-12843943 | None:intergenic | 45.0% | |
GAAAGCTCTCACAATGCAGA+TGG | - | chr3_2:12844080-12844099 | Msa0395750:CDS | 45.0% | |
CGTCCTTAGTTTCATTCTGC+TGG | + | chr3_2:12844127-12844146 | None:intergenic | 45.0% | |
AACTAAGGACGAACCACCTA+AGG | - | chr3_2:12844136-12844155 | Msa0395750:CDS | 45.0% | |
! | GCCTCCTGATTTTTCTCCTT+AGG | + | chr3_2:12844155-12844174 | None:intergenic | 45.0% |
GGCGGAAAACAATGAAGTGA+AGG | - | chr3_2:12844172-12844191 | Msa0395750:CDS | 45.0% | |
TCCTATGGAGAAGAGTCATC+AGG | - | chr3_2:12844226-12844245 | Msa0395750:CDS | 45.0% | |
TCCTGATGACTCTTCTCCAT+AGG | + | chr3_2:12844230-12844249 | None:intergenic | 45.0% | |
! | GAAGAGTGAAGAGAAGCACA+AGG | - | chr3_2:12844298-12844317 | Msa0395750:intron | 45.0% |
!!! | CGTGCCATTTGGCTTGTTTT+TGG | + | chr3_2:12844354-12844373 | None:intergenic | 45.0% |
!! | ACACGATAGCGGAAACAATC+AGG | + | chr3_2:12844452-12844471 | None:intergenic | 45.0% |
TTGTTTCCGCTATCGTGTCA+TGG | - | chr3_2:12844454-12844473 | Msa0395750:CDS | 45.0% | |
TGTTTCCGCTATCGTGTCAT+GGG | - | chr3_2:12844455-12844474 | Msa0395750:CDS | 45.0% | |
AAACACCCATGACACGATAG+CGG | + | chr3_2:12844463-12844482 | None:intergenic | 45.0% | |
TACAAGGCTTCATCTTCTGG+TGG | - | chr3_2:12844572-12844591 | Msa0395750:intron | 45.0% | |
AAACTTGCCACCAAAAGCTC+GGG | + | chr3_2:12844612-12844631 | None:intergenic | 45.0% | |
GAAACTTGCCACCAAAAGCT+CGG | + | chr3_2:12844613-12844632 | None:intergenic | 45.0% | |
TGCTGATAGCTGATGACTTC+AGG | - | chr3_2:12844705-12844724 | Msa0395750:CDS | 45.0% | |
ATAGCTGATGACTTCAGGTG+CGG | - | chr3_2:12844710-12844729 | Msa0395750:CDS | 45.0% | |
TTCTGATTCTTTCCCGCTAC+CGG | - | chr3_2:12844744-12844763 | Msa0395750:CDS | 45.0% | |
TGAAAATGCTTTCCGGTAGC+GGG | + | chr3_2:12844759-12844778 | None:intergenic | 45.0% | |
CAAATGTTCTGCTCCAGGTT+AGG | - | chr3_2:12844906-12844925 | Msa0395750:CDS | 45.0% | |
AATTCAAGAAAGGGAGGCTC+CGG | - | chr3_2:12845006-12845025 | Msa0395750:CDS | 45.0% | |
ATCACGGCACAATTTGCACA+TGG | - | chr3_2:12845042-12845061 | Msa0395750:CDS | 45.0% | |
TTGCACATGGAAAGAGCTGT+TGG | - | chr3_2:12845055-12845074 | Msa0395750:CDS | 45.0% | |
AGATTATGAACACCGTCCTG+TGG | - | chr3_2:12845207-12845226 | Msa0395750:CDS | 45.0% | |
CATGAACGGGAACATTGCTT+TGG | + | chr3_2:12845243-12845262 | None:intergenic | 45.0% | |
! | GAGTATAGCTCTGCTGTTCA+CGG | + | chr3_2:12845303-12845322 | None:intergenic | 45.0% |
CTTGGCTCCTTTAAGTAGAG+AGG | - | chr3_2:12845390-12845409 | Msa0395750:CDS | 45.0% | |
CTCCAAGCTCGTATTTGGTT+GGG | - | chr3_2:12845419-12845438 | Msa0395750:CDS | 45.0% | |
TCCAAGCTCGTATTTGGTTG+GGG | - | chr3_2:12845420-12845439 | Msa0395750:CDS | 45.0% | |
ATGTTATCAGTCCCGGCAAA+AGG | + | chr3_2:12845451-12845470 | None:intergenic | 45.0% | |
GGAGAGAGATCGTTGAAGAT+AGG | - | chr3_2:12845476-12845495 | Msa0395750:CDS | 45.0% | |
ACCATCAAGTGCAGCCATAT+CGG | - | chr3_2:12845539-12845558 | Msa0395750:CDS | 45.0% | |
TCATCTCGTTACTCTTTCGC+TGG | - | chr3_2:12845595-12845614 | Msa0395750:CDS | 45.0% | |
GTCAGCGACGAGAATATGAA+GGG | + | chr3_2:12845621-12845640 | None:intergenic | 45.0% | |
AGTCAGCGACGAGAATATGA+AGG | + | chr3_2:12845622-12845641 | None:intergenic | 45.0% | |
GTCAAAAGGAAGACATGCCA+AGG | + | chr3_2:12845664-12845683 | None:intergenic | 45.0% | |
GGATCAGGAAGAGACCAAGA+TGG | - | chr3_2:12843491-12843510 | Msa0395750:three_prime_UTR | 50.0% | |
GGATCAAGAAGAGTCCAGAG+TGG | - | chr3_2:12843530-12843549 | Msa0395750:three_prime_UTR | 50.0% | |
AGTGGCCACTGAGCATAACA+TGG | - | chr3_2:12843548-12843567 | Msa0395750:three_prime_UTR | 50.0% | |
ACTCTTCCTCCTGAAGGATC+TGG | - | chr3_2:12843894-12843913 | Msa0395750:CDS | 50.0% | |
GGTTTACCAGATCCTTCAGG+AGG | + | chr3_2:12843903-12843922 | None:intergenic | 50.0% | |
GGGGGAACCATTCTTCTTCT+TGG | + | chr3_2:12844006-12844025 | None:intergenic | 50.0% | |
!! | GGACTCTTTTCCGTGCCATT+TGG | + | chr3_2:12844365-12844384 | None:intergenic | 50.0% |
GATGTTCTACGGATCAAGCC+TGG | - | chr3_2:12844500-12844519 | Msa0395750:intron | 50.0% | |
! | AAGCTTGAACCCCGAGCTTT+TGG | - | chr3_2:12844599-12844618 | Msa0395750:CDS | 50.0% |
AACTTGCCACCAAAAGCTCG+GGG | + | chr3_2:12844611-12844630 | None:intergenic | 50.0% | |
! | ACCAGACTTTTCCGACCAGT+TGG | - | chr3_2:12844935-12844954 | Msa0395750:CDS | 50.0% |
TCCAACTGGTCGGAAAAGTC+TGG | + | chr3_2:12844939-12844958 | None:intergenic | 50.0% | |
CTGAATGAGCTCCAACTGGT+CGG | + | chr3_2:12844949-12844968 | None:intergenic | 50.0% | |
ACTGCTGAATGAGCTCCAAC+TGG | + | chr3_2:12844953-12844972 | None:intergenic | 50.0% | |
ATTCAAGAAAGGGAGGCTCC+GGG | - | chr3_2:12845007-12845026 | Msa0395750:CDS | 50.0% | |
!! | ACATCAACTTGAGCGTCGAG+AGG | - | chr3_2:12845078-12845097 | Msa0395750:CDS | 50.0% |
!! | GGAACATTGCTTTGGTAGCG+AGG | + | chr3_2:12845235-12845254 | None:intergenic | 50.0% |
GCGATGGCCTCTCTACTTAA+AGG | + | chr3_2:12845400-12845419 | None:intergenic | 50.0% | |
CAAATACGAGCTTGGAGCGA+TGG | + | chr3_2:12845416-12845435 | None:intergenic | 50.0% | |
CATCGCTCCAAGCTCGTATT+TGG | - | chr3_2:12845414-12845433 | Msa0395750:CDS | 50.0% | |
GCTCCAAGCTCGTATTTGGT+TGG | - | chr3_2:12845418-12845437 | Msa0395750:CDS | 50.0% | |
CCAAGCTCGTATTTGGTTGG+GGG | - | chr3_2:12845421-12845440 | Msa0395750:CDS | 50.0% | |
CCTTCGCATGTTATCAGTCC+CGG | + | chr3_2:12845458-12845477 | None:intergenic | 50.0% | |
! | GGCTGCACTTGATGGTAATC+AGG | + | chr3_2:12845535-12845554 | None:intergenic | 50.0% |
CCATCAAGTGCAGCCATATC+GGG | - | chr3_2:12845540-12845559 | Msa0395750:CDS | 50.0% | |
CATCAAGTGCAGCCATATCG+GGG | - | chr3_2:12845541-12845560 | Msa0395750:CDS | 50.0% | |
TCCAACTTGTCTCCCCGATA+TGG | + | chr3_2:12845556-12845575 | None:intergenic | 50.0% | |
GGATCAGGAAGAGACCAAGA+TGG | - | chr3_2:12843491-12843510 | Msa0395750:three_prime_UTR | 50.0% | |
GGATCAAGAAGAGTCCAGAG+TGG | - | chr3_2:12843530-12843549 | Msa0395750:three_prime_UTR | 50.0% | |
AGTGGCCACTGAGCATAACA+TGG | - | chr3_2:12843548-12843567 | Msa0395750:three_prime_UTR | 50.0% | |
ACTCTTCCTCCTGAAGGATC+TGG | - | chr3_2:12843894-12843913 | Msa0395750:CDS | 50.0% | |
GGTTTACCAGATCCTTCAGG+AGG | + | chr3_2:12843903-12843922 | None:intergenic | 50.0% | |
GGGGGAACCATTCTTCTTCT+TGG | + | chr3_2:12844006-12844025 | None:intergenic | 50.0% | |
!! | GGACTCTTTTCCGTGCCATT+TGG | + | chr3_2:12844365-12844384 | None:intergenic | 50.0% |
GATGTTCTACGGATCAAGCC+TGG | - | chr3_2:12844500-12844519 | Msa0395750:intron | 50.0% | |
! | AAGCTTGAACCCCGAGCTTT+TGG | - | chr3_2:12844599-12844618 | Msa0395750:CDS | 50.0% |
AACTTGCCACCAAAAGCTCG+GGG | + | chr3_2:12844611-12844630 | None:intergenic | 50.0% | |
! | ACCAGACTTTTCCGACCAGT+TGG | - | chr3_2:12844935-12844954 | Msa0395750:CDS | 50.0% |
TCCAACTGGTCGGAAAAGTC+TGG | + | chr3_2:12844939-12844958 | None:intergenic | 50.0% | |
CTGAATGAGCTCCAACTGGT+CGG | + | chr3_2:12844949-12844968 | None:intergenic | 50.0% | |
ACTGCTGAATGAGCTCCAAC+TGG | + | chr3_2:12844953-12844972 | None:intergenic | 50.0% | |
ATTCAAGAAAGGGAGGCTCC+GGG | - | chr3_2:12845007-12845026 | Msa0395750:CDS | 50.0% | |
!! | ACATCAACTTGAGCGTCGAG+AGG | - | chr3_2:12845078-12845097 | Msa0395750:CDS | 50.0% |
!! | GGAACATTGCTTTGGTAGCG+AGG | + | chr3_2:12845235-12845254 | None:intergenic | 50.0% |
GCGATGGCCTCTCTACTTAA+AGG | + | chr3_2:12845400-12845419 | None:intergenic | 50.0% | |
CAAATACGAGCTTGGAGCGA+TGG | + | chr3_2:12845416-12845435 | None:intergenic | 50.0% | |
CATCGCTCCAAGCTCGTATT+TGG | - | chr3_2:12845414-12845433 | Msa0395750:CDS | 50.0% | |
GCTCCAAGCTCGTATTTGGT+TGG | - | chr3_2:12845418-12845437 | Msa0395750:CDS | 50.0% | |
CCAAGCTCGTATTTGGTTGG+GGG | - | chr3_2:12845421-12845440 | Msa0395750:CDS | 50.0% | |
CCTTCGCATGTTATCAGTCC+CGG | + | chr3_2:12845458-12845477 | None:intergenic | 50.0% | |
! | GGCTGCACTTGATGGTAATC+AGG | + | chr3_2:12845535-12845554 | None:intergenic | 50.0% |
CCATCAAGTGCAGCCATATC+GGG | - | chr3_2:12845540-12845559 | Msa0395750:CDS | 50.0% | |
CATCAAGTGCAGCCATATCG+GGG | - | chr3_2:12845541-12845560 | Msa0395750:CDS | 50.0% | |
TCCAACTTGTCTCCCCGATA+TGG | + | chr3_2:12845556-12845575 | None:intergenic | 50.0% | |
GTTATGCTCAGTGGCCACTC+TGG | + | chr3_2:12843547-12843566 | None:intergenic | 55.0% | |
! | CTTGAACCCCGAGCTTTTGG+TGG | - | chr3_2:12844602-12844621 | Msa0395750:CDS | 55.0% |
AGAGAGAGAGTAACCTGGGC+AGG | + | chr3_2:12844635-12844654 | None:intergenic | 55.0% | |
GTCTGGTGAGCTTCCTAACC+TGG | + | chr3_2:12844922-12844941 | None:intergenic | 55.0% | |
!! | CTTTGGTAGCGAGGTTCCAC+AGG | + | chr3_2:12845226-12845245 | None:intergenic | 55.0% |
CCCCCAACCAAATACGAGCT+TGG | + | chr3_2:12845424-12845443 | None:intergenic | 55.0% | |
! | GTTGGGGGAAGACCTTTTGC+CGG | - | chr3_2:12845436-12845455 | Msa0395750:CDS | 55.0% |
! | TTGGGGGAAGACCTTTTGCC+GGG | - | chr3_2:12845437-12845456 | Msa0395750:CDS | 55.0% |
CCGGGACTGATAACATGCGA+AGG | - | chr3_2:12845455-12845474 | Msa0395750:CDS | 55.0% | |
CCCGATATGGCTGCACTTGA+TGG | + | chr3_2:12845543-12845562 | None:intergenic | 55.0% | |
GCCATATCGGGGAGACAAGT+TGG | - | chr3_2:12845552-12845571 | Msa0395750:CDS | 55.0% | |
GTTATGCTCAGTGGCCACTC+TGG | + | chr3_2:12843547-12843566 | None:intergenic | 55.0% | |
! | CTTGAACCCCGAGCTTTTGG+TGG | - | chr3_2:12844602-12844621 | Msa0395750:CDS | 55.0% |
AGAGAGAGAGTAACCTGGGC+AGG | + | chr3_2:12844635-12844654 | None:intergenic | 55.0% | |
GTCTGGTGAGCTTCCTAACC+TGG | + | chr3_2:12844922-12844941 | None:intergenic | 55.0% | |
!! | CTTTGGTAGCGAGGTTCCAC+AGG | + | chr3_2:12845226-12845245 | None:intergenic | 55.0% |
CCCCCAACCAAATACGAGCT+TGG | + | chr3_2:12845424-12845443 | None:intergenic | 55.0% | |
! | GTTGGGGGAAGACCTTTTGC+CGG | - | chr3_2:12845436-12845455 | Msa0395750:CDS | 55.0% |
! | TTGGGGGAAGACCTTTTGCC+GGG | - | chr3_2:12845437-12845456 | Msa0395750:CDS | 55.0% |
CCGGGACTGATAACATGCGA+AGG | - | chr3_2:12845455-12845474 | Msa0395750:CDS | 55.0% | |
CCCGATATGGCTGCACTTGA+TGG | + | chr3_2:12845543-12845562 | None:intergenic | 55.0% | |
GCCATATCGGGGAGACAAGT+TGG | - | chr3_2:12845552-12845571 | Msa0395750:CDS | 55.0% | |
TGGTGGCAAGTTTCCTGCCC+AGG | - | chr3_2:12844619-12844638 | Msa0395750:CDS | 60.0% | |
AAGAAAGGGAGGCTCCGGGT+CGG | - | chr3_2:12845011-12845030 | Msa0395750:CDS | 60.0% | |
GGTAGCGAGGTTCCACAGGA+CGG | + | chr3_2:12845222-12845241 | None:intergenic | 60.0% | |
TGGTGGCAAGTTTCCTGCCC+AGG | - | chr3_2:12844619-12844638 | Msa0395750:CDS | 60.0% | |
AAGAAAGGGAGGCTCCGGGT+CGG | - | chr3_2:12845011-12845030 | Msa0395750:CDS | 60.0% | |
GGTAGCGAGGTTCCACAGGA+CGG | + | chr3_2:12845222-12845241 | None:intergenic | 60.0% | |
AGAAAGGGAGGCTCCGGGTC+GGG | - | chr3_2:12845012-12845031 | Msa0395750:CDS | 65.0% | |
AGAAAGGGAGGCTCCGGGTC+GGG | - | chr3_2:12845012-12845031 | Msa0395750:CDS | 65.0% | |
CGTGATCCCCTGACCCGACC+CGG | + | chr3_2:12845028-12845047 | None:intergenic | 70.0% | |
CGGGTCGGGTCAGGGGATCA+CGG | - | chr3_2:12845026-12845045 | Msa0395750:CDS | 70.0% | |
CGTGATCCCCTGACCCGACC+CGG | + | chr3_2:12845028-12845047 | None:intergenic | 70.0% | |
CGGGTCGGGTCAGGGGATCA+CGG | - | chr3_2:12845026-12845045 | Msa0395750:CDS | 70.0% | |
GGAGGCTCCGGGTCGGGTCA+GGG | - | chr3_2:12845018-12845037 | Msa0395750:CDS | 75.0% | |
GAGGCTCCGGGTCGGGTCAG+GGG | - | chr3_2:12845019-12845038 | Msa0395750:CDS | 75.0% | |
GGAGGCTCCGGGTCGGGTCA+GGG | - | chr3_2:12845018-12845037 | Msa0395750:CDS | 75.0% | |
GAGGCTCCGGGTCGGGTCAG+GGG | - | chr3_2:12845019-12845038 | Msa0395750:CDS | 75.0% | |
! | GGGAGGCTCCGGGTCGGGTC+AGG | - | chr3_2:12845017-12845036 | Msa0395750:CDS | 80.0% |
! | GGGAGGCTCCGGGTCGGGTC+AGG | - | chr3_2:12845017-12845036 | Msa0395750:CDS | 80.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr3_2 | gene | 12843393 | 12845842 | 12843393 | ID=Msa0395750;Name=Msa0395750 |
chr3_2 | mRNA | 12843393 | 12845842 | 12843393 | ID=Msa0395750-mRNA-1;Parent=Msa0395750;Name=Msa0395750-mRNA-1;_AED=0.08;_eAED=0.08;_QI=0|1|0.66|1|1|1|3|203|693 |
chr3_2 | exon | 12843393 | 12844312 | 12843393 | ID=Msa0395750-mRNA-1:exon:3029;Parent=Msa0395750-mRNA-1 |
chr3_2 | exon | 12844392 | 12844508 | 12844392 | ID=Msa0395750-mRNA-1:exon:3028;Parent=Msa0395750-mRNA-1 |
chr3_2 | exon | 12844595 | 12845842 | 12844595 | ID=Msa0395750-mRNA-1:exon:3027;Parent=Msa0395750-mRNA-1 |
chr3_2 | CDS | 12844595 | 12845842 | 12844595 | ID=Msa0395750-mRNA-1:cds;Parent=Msa0395750-mRNA-1 |
chr3_2 | CDS | 12844392 | 12844508 | 12844392 | ID=Msa0395750-mRNA-1:cds;Parent=Msa0395750-mRNA-1 |
chr3_2 | CDS | 12843596 | 12844312 | 12843596 | ID=Msa0395750-mRNA-1:cds;Parent=Msa0395750-mRNA-1 |
chr3_2 | three_prime_UTR | 12843393 | 12843595 | 12843393 | ID=Msa0395750-mRNA-1:three_prime_utr;Parent=Msa0395750-mRNA-1 |
Gene Sequence |
Protein sequence |