AlfalfaGEDB | Msa1329200

M. sativa cultivar zhongmu-4 / Msa1329200

KEGG: K01369
GO: GO:0000322 GO:0000325 GO:0000326 GO:0003674 GO:0003824 GO:0004175 GO:0004197 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0006508 GO:0006624 GO:0006807 GO:0006996 GO:0007033 GO:0008150 GO:0008152 GO:0008233 GO:0008234 GO:0009056 GO:0009057 GO:0009987 GO:0010467 GO:0016043 GO:0016485 GO:0016787 GO:0019538 GO:0030163 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044238 GO:0044248 GO:0044257 GO:0044260 GO:0044265 GO:0044267 GO:0044424 GO:0044444 GO:0044464 GO:0051603 GO:0051604 GO:0070011 GO:0071704 GO:0071840 GO:0140096 GO:1901564 GO:1901565 GO:1901575 GO:1990019
PFAM: PF01650.21

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa1329200	sp\|P49045\|VPE_SOYBN	80.443	271	53	0	1	271	225	495	1.59e-170	483

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa1329200	G7JK51	96.310	271	10	0	1	271	224	494	0.0	551

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
Msa0023330	Msa1329200	0.810377	1.188373e-50	-8.615850e-47
Msa0026630	Msa1329200	0.808768	2.633355e-50	-8.615850e-47
Msa0028620	Msa1329200	0.837567	4.815399e-57	-8.615850e-47
Msa0032080	Msa1329200	0.835215	1.910607e-56	-8.615850e-47
Msa0032100	Msa1329200	0.835444	1.672136e-56	-8.615850e-47
Msa0032470	Msa1329200	0.832458	9.346788e-56	-8.615850e-47
Msa0043980	Msa1329200	0.855353	6.680593e-62	-8.615850e-47
Msa0076290	Msa1329200	0.804914	1.718237e-49	-8.615850e-47
Msa0079070	Msa1329200	0.811291	7.534810e-51	-8.615850e-47
Msa0079130	Msa1329200	0.841464	4.676504e-58	-8.615850e-47
Msa0079370	Msa1329200	0.809632	1.718880e-50	-8.615850e-47
Msa0083280	Msa1329200	0.802089	6.618569e-49	-8.615850e-47
Msa0101500	Msa1329200	-0.803489	3.402959e-49	-8.615850e-47
Msa0115790	Msa1329200	0.849516	3.075329e-60	-8.615850e-47
Msa0604290	Msa1329200	0.847486	1.121894e-59	-8.615850e-47
Msa0613420	Msa1329200	0.802450	5.577877e-49	-8.615850e-47
Msa0623990	Msa1329200	0.831043	2.087027e-55	-8.615850e-47
Msa0624060	Msa1329200	0.847967	8.269942e-60	-8.615850e-47
Msa0641130	Msa1329200	0.822849	1.900493e-53	-8.615850e-47
Msa0645530	Msa1329200	0.819913	9.045471e-53	-8.615850e-47
Msa0657930	Msa1329200	-0.812112	4.993900e-51	-8.615850e-47
Msa0658890	Msa1329200	0.808237	3.418743e-50	-8.615850e-47
Msa0662540	Msa1329200	0.820838	5.551567e-53	-8.615850e-47
Msa0672760	Msa1329200	0.825568	4.365600e-54	-8.615850e-47
Msa0676130	Msa1329200	0.850359	1.787267e-60	-8.615850e-47
Msa0676180	Msa1329200	0.853575	2.181939e-61	-8.615850e-47
Msa0685090	Msa1329200	0.839948	1.167435e-57	-8.615850e-47
Msa0696540	Msa1329200	0.807562	4.758252e-50	-8.615850e-47
Msa0711450	Msa1329200	0.802985	4.326547e-49	-8.615850e-47
Msa0724170	Msa1329200	0.800485	1.410010e-48	-8.615850e-47
Msa0750850	Msa1329200	0.807363	5.244007e-50	-8.615850e-47
Msa0795340	Msa1329200	0.811011	8.663543e-51	-8.615850e-47
Msa0796250	Msa1329200	0.829498	4.977607e-55	-8.615850e-47
Msa0832150	Msa1329200	0.807248	5.545468e-50	-8.615850e-47
Msa0832340	Msa1329200	0.806296	8.810921e-50	-8.615850e-47
Msa0837890	Msa1329200	0.802355	5.835438e-49	-8.615850e-47
Msa0124320	Msa1329200	0.806810	6.865960e-50	-8.615850e-47
Msa0138020	Msa1329200	0.831149	1.965827e-55	-8.615850e-47
Msa0139550	Msa1329200	-0.849083	4.060024e-60	-8.615850e-47
Msa0144530	Msa1329200	0.814173	1.763326e-51	-8.615850e-47
Msa0148080	Msa1329200	0.810574	1.077089e-50	-8.615850e-47
Msa0171870	Msa1329200	0.800627	1.318895e-48	-8.615850e-47
Msa0172060	Msa1329200	0.828157	1.051014e-54	-8.615850e-47
Msa0172080	Msa1329200	0.817194	3.741729e-52	-8.615850e-47
Msa0178570	Msa1329200	0.846513	2.072547e-59	-8.615850e-47
Msa0186950	Msa1329200	0.816386	5.681433e-52	-8.615850e-47
Msa0189030	Msa1329200	0.803808	2.920644e-49	-8.615850e-47
Msa0196670	Msa1329200	0.803135	4.028546e-49	-8.615850e-47
Msa0206010	Msa1329200	0.801952	7.062915e-49	-8.615850e-47
Msa0218370	Msa1329200	0.868873	4.722927e-66	-8.615850e-47
Msa0219590	Msa1329200	0.848434	6.143657e-60	-8.615850e-47
Msa0236420	Msa1329200	0.821503	3.900731e-53	-8.615850e-47
Msa1236440	Msa1329200	0.824023	1.010303e-53	-8.615850e-47
Msa1240970	Msa1329200	0.800811	1.209737e-48	-8.615850e-47
Msa1256700	Msa1329200	0.800383	1.479122e-48	-8.615850e-47
Msa1257750	Msa1329200	0.940024	4.725331e-100	-8.615850e-47
Msa1271130	Msa1329200	0.803611	3.210126e-49	-8.615850e-47
Msa1277670	Msa1329200	0.825614	4.258906e-54	-8.615850e-47
Msa1282440	Msa1329200	0.821961	3.055703e-53	-8.615850e-47
Msa1305660	Msa1329200	0.811849	5.698970e-51	-8.615850e-47
Msa1305810	Msa1329200	0.806285	8.861848e-50	-8.615850e-47
Msa1308870	Msa1329200	0.800772	1.232142e-48	-8.615850e-47
Msa1325410	Msa1329200	-0.800709	1.269145e-48	-8.615850e-47
Msa1329200	Msa1331320	0.816695	4.842403e-52	-8.615850e-47
Msa1329200	Msa1336290	0.803522	3.348290e-49	-8.615850e-47
Msa1329200	Msa1342380	0.810988	8.766190e-51	-8.615850e-47
Msa1329200	Msa1346840	0.830288	3.195930e-55	-8.615850e-47
Msa1329200	Msa1355180	0.836494	9.053295e-57	-8.615850e-47
Msa1329200	Msa1357560	0.842238	2.922085e-58	-8.615850e-47
Msa1329200	Msa1358500	0.804665	1.937175e-49	-8.615850e-47
Msa1329200	Msa1372240	0.844701	6.422144e-59	-8.615850e-47
Msa1329200	Msa1378410	0.845749	3.344319e-59	-8.615850e-47
Msa1329200	Msa1390020	0.813911	2.014267e-51	-8.615850e-47
Msa1329200	Msa1392210	0.802961	4.376102e-49	-8.615850e-47
Msa1329200	Msa1401990	0.844065	9.520454e-59	-8.615850e-47
Msa1329200	Msa1407760	0.805620	1.222304e-49	-8.615850e-47
Msa1329200	Msa1410550	0.801255	9.816987e-49	-8.615850e-47
Msa1329200	Msa1419690	0.825616	4.253055e-54	-8.615850e-47
Msa1329200	Msa1419840	0.854411	1.253612e-61	-8.615850e-47
Msa1329200	Msa1437730	0.814104	1.825456e-51	-8.615850e-47
Msa1329200	Msa1442920	0.833467	5.246011e-56	-8.615850e-47
Msa1329200	Msa1454890	0.809668	1.689146e-50	-8.615850e-47
Msa1329200	Msa1458680	0.834988	2.179453e-56	-8.615850e-47
Msa1329200	Msa1460050	0.801438	9.003638e-49	-8.615850e-47
Msa1329200	Msa1462290	0.801226	9.948146e-49	-8.615850e-47
Msa0374220	Msa1329200	0.845383	4.203967e-59	-8.615850e-47
Msa0384090	Msa1329200	0.862222	5.905301e-64	-8.615850e-47
Msa0388730	Msa1329200	0.811460	6.925179e-51	-8.615850e-47
Msa0395750	Msa1329200	0.823728	1.184520e-53	-8.615850e-47
Msa0398670	Msa1329200	0.811205	7.864160e-51	-8.615850e-47
Msa0434540	Msa1329200	0.881804	1.769681e-70	-8.615850e-47
Msa0455760	Msa1329200	0.815943	7.132611e-52	-8.615850e-47
Msa0469890	Msa1329200	0.831366	1.738945e-55	-8.615850e-47
Msa0470880	Msa1329200	0.807650	4.556908e-50	-8.615850e-47
Msa0478370	Msa1329200	0.807659	4.537912e-50	-8.615850e-47
Msa0985180	Msa1329200	0.809009	2.338614e-50	-8.615850e-47
Msa1026640	Msa1329200	0.807402	5.144987e-50	-8.615850e-47
Msa1028140	Msa1329200	0.807610	4.648223e-50	-8.615850e-47
Msa1036300	Msa1329200	0.822519	2.268044e-53	-8.615850e-47
Msa1051850	Msa1329200	0.807193	5.697511e-50	-8.615850e-47
Msa1058750	Msa1329200	0.813398	2.611796e-51	-8.615850e-47
Msa1067010	Msa1329200	0.807486	4.937244e-50	-8.615850e-47
Msa1081790	Msa1329200	-0.800136	1.660508e-48	-8.615850e-47
Msa0241140	Msa1329200	0.812569	3.968311e-51	-8.615850e-47
Msa0261090	Msa1329200	0.801020	1.096439e-48	-8.615850e-47
Msa0270960	Msa1329200	0.827313	1.676373e-54	-8.615850e-47
Msa0285330	Msa1329200	0.815591	8.548017e-52	-8.615850e-47
Msa0286670	Msa1329200	0.812543	4.021505e-51	-8.615850e-47
Msa0287410	Msa1329200	0.816288	5.975536e-52	-8.615850e-47
Msa0287870	Msa1329200	0.844676	6.523280e-59	-8.615850e-47
Msa0305410	Msa1329200	0.816782	4.629908e-52	-8.615850e-47
Msa0316390	Msa1329200	0.831211	1.898367e-55	-8.615850e-47
Msa0318680	Msa1329200	0.811820	5.782329e-51	-8.615850e-47
Msa0326110	Msa1329200	0.804364	2.238413e-49	-8.615850e-47
Msa0363790	Msa1329200	0.824376	8.348506e-54	-8.615850e-47
Msa1107260	Msa1329200	0.813389	2.623491e-51	-8.615850e-47
Msa1122150	Msa1329200	0.881895	1.640774e-70	-8.615850e-47
Msa1140630	Msa1329200	0.835690	1.449230e-56	-8.615850e-47
Msa1150900	Msa1329200	0.816519	5.304468e-52	-8.615850e-47
Msa1160560	Msa1329200	0.885313	9.054702e-72	-8.615850e-47
Msa1196610	Msa1329200	-0.808453	3.073768e-50	-8.615850e-47
Msa1213890	Msa1329200	0.807899	4.034669e-50	-8.615850e-47
Msa1213980	Msa1329200	0.801317	9.531935e-49	-8.615850e-47
Msa0489540	Msa1329200	0.806727	7.148122e-50	-8.615850e-47
Msa0521270	Msa1329200	0.832827	7.570138e-56	-8.615850e-47
Msa0522500	Msa1329200	0.819790	9.652647e-53	-8.615850e-47
Msa0527540	Msa1329200	0.847355	1.218800e-59	-8.615850e-47
Msa0530560	Msa1329200	0.828045	1.118423e-54	-8.615850e-47
Msa0538670	Msa1329200	0.802884	4.539020e-49	-8.615850e-47
Msa0542260	Msa1329200	0.826020	3.410279e-54	-8.615850e-47
Msa0542560	Msa1329200	0.814402	1.569203e-51	-8.615850e-47
Msa0545050	Msa1329200	0.828876	7.043336e-55	-8.615850e-47
Msa0564850	Msa1329200	0.806497	7.992870e-50	-8.615850e-47
Msa0566120	Msa1329200	-0.800684	1.284252e-48	-8.615850e-47
Msa0566350	Msa1329200	0.820960	5.203623e-53	-8.615850e-47
Msa0566750	Msa1329200	0.809073	2.265713e-50	-8.615850e-47
Msa0600590	Msa1329200	0.803489	3.401725e-49	-8.615850e-47
Msa0861540	Msa1329200	0.812761	3.603466e-51	-8.615850e-47
Msa0878220	Msa1329200	0.849204	3.757141e-60	-8.615850e-47
Msa0910620	Msa1329200	0.817154	3.820118e-52	-8.615850e-47
Msa0936070	Msa1329200	0.815703	8.069104e-52	-8.615850e-47
Msa0943970	Msa1329200	0.862931	3.571352e-64	-8.615850e-47
Msa0944020	Msa1329200	0.862417	5.143597e-64	-8.615850e-47
Msa0958920	Msa1329200	0.805264	1.451527e-49	-8.615850e-47
Msa0964310	Msa1329200	0.819178	1.331366e-52	-8.615850e-47

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa1329200	MtrunA17_Chr4g0056561	96.310	271	10	0	1	271	224	494	0.0	551
Msa1329200	MtrunA17_Chr3g0135491	53.725	255	116	2	1	254	214	467	5.10e-99	298
Msa1329200	MtrunA17_Chr1g0151801	52.190	274	125	3	1	271	223	493	3.13e-91	278
Msa1329200	MtrunA17_Chr7g0248651	36.226	265	151	3	1	254	212	469	6.21e-54	181
Msa1329200	MtrunA17_Chr7g0226441	37.500	208	106	3	61	254	1	198	4.31e-44	148
Msa1329200	MtrunA17_Chr7g0246061	34.737	190	109	4	73	256	8	188	5.52e-30	111
Msa1329200	MtrunA17_Chr7g0226431	65.455	55	19	0	1	55	9	63	1.59e-22	88.6
Msa1329200	MtrunA17_Chr7g0246051	43.636	55	31	0	1	55	211	265	2.57e-12	65.5

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa1329200	AT1G62710.1	68.864	273	81	2	1	271	216	486	1.42e-139	402
Msa1329200	AT4G32940.1	53.676	272	124	2	1	271	224	494	2.70e-91	279
Msa1329200	AT2G25940.1	50.735	272	131	3	1	271	209	478	1.51e-87	269
Msa1329200	AT3G20210.1	37.354	257	151	4	1	250	211	464	2.50e-47	164

Find 85 sgRNAs with CRISPR-Local

Find 258 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
AAGACAAATTAAATTAAATT+AGG	0.218095	8_4:-47557990	None:intergenic
GTGAGTCGCACAATCTAAAA+AGG	0.261597	8_4:-47559423	Msa1329200:CDS
TGACAAACTAGGATCTAAAA+TGG	0.296605	8_4:-47559126	Msa1329200:CDS
CGGTGTTTCTGAGGATTCTA+TGG	0.301877	8_4:-47558441	Msa1329200:CDS
AACAGTTTCTACTTTATCTT+AGG	0.305913	8_4:+47558157	None:intergenic
AATTACAACAACTATGCATT+AGG	0.321118	8_4:-47559248	Msa1329200:CDS
GCACTATAACCTCTGTTTGA+TGG	0.321858	8_4:+47558368	None:intergenic
TGTGGGTCACTGACACAGTA+TGG	0.329644	8_4:-47558503	Msa1329200:CDS
ATAAAATCTCTGCATCTCTT+TGG	0.334302	8_4:+47559093	None:intergenic
GTCTACCTCTTGTTGATGAT+TGG	0.335492	8_4:-47558797	Msa1329200:CDS
CTCGTCAATTGTGAAATTGC+TGG	0.336695	8_4:-47558286	Msa1329200:three_prime_UTR
GATGGTAGCGTGGAATTGAT+TGG	0.366010	8_4:-47558879	Msa1329200:CDS
GGAGGAAGGTTCACCGTTGC+AGG	0.366394	8_4:+47559155	None:intergenic
ACATTATGTTGAACATATAT+TGG	0.373351	8_4:+47558220	None:intergenic
TCTACCTCTTGTTGATGATT+GGG	0.402654	8_4:-47558796	Msa1329200:CDS
CCAATGCACAAGAGAGTAGT+TGG	0.407355	8_4:-47559815	Msa1329200:CDS
ACATAAACATTAAGATCCTT+TGG	0.408253	8_4:+47559849	None:intergenic
GGTTCTCATGTGATGCAATA+TGG	0.435826	8_4:-47559227	Msa1329200:CDS
ATTGGGAATGCTTAAAATCA+AGG	0.438195	8_4:-47558779	Msa1329200:CDS
AAAAGGTTCTTCAGTTCTAC+AGG	0.438706	8_4:-47558835	Msa1329200:CDS
CCAACTACTCTCTTGTGCAT+TGG	0.445049	8_4:+47559815	None:intergenic
GTAATTTGCAATTGAGAGAA+TGG	0.447007	8_4:-47558086	Msa1329200:three_prime_UTR
AAGATAAAGTAGAAACTGTT+GGG	0.472867	8_4:-47558154	Msa1329200:three_prime_UTR
ATGTACTCTGGAGGTGGAGC+AGG	0.473851	8_4:+47559768	None:intergenic
TTACTGTTTGGTCCAACAAA+AGG	0.476498	8_4:-47558852	Msa1329200:CDS
CAGAGTACATCACTTGCCTC+GGG	0.479005	8_4:-47559755	Msa1329200:CDS
AAACATAGGAATCATTTAGA+TGG	0.482034	8_4:-47558897	Msa1329200:CDS
GGTGAAACAACAATACAAAT+CGG	0.482608	8_4:-47559395	Msa1329200:intron
CCTTGAGAAGATTGCGGAGA+CGG	0.485427	8_4:-47558922	Msa1329200:CDS
ACTTTGTGTGGTACACTACA+TGG	0.485469	8_4:-47558342	Msa1329200:three_prime_UTR
CAATGCACAAGAGAGTAGTT+GGG	0.486134	8_4:-47559814	Msa1329200:CDS
CTACAGGCTCTTAGAGAACC+TGG	0.489099	8_4:-47558819	Msa1329200:CDS
ACATATATTGGAGGCGCATA+GGG	0.489470	8_4:+47558232	None:intergenic
GGTGGAGCAGGTTCCACTCC+AGG	0.496020	8_4:+47559780	None:intergenic
TCTGTATAGTGTTGCTTGGA+TGG	0.497339	8_4:-47559730	Msa1329200:CDS
AACATATATTGGAGGCGCAT+AGG	0.498831	8_4:+47558231	None:intergenic
CCTCCTCACAATGACAAACT+AGG	0.499499	8_4:-47559137	Msa1329200:CDS
AGTTGGGGAACTTACTGTCC+TGG	0.508806	8_4:-47559798	Msa1329200:CDS
GTGTTGCTTGGATGGAAGAC+AGG	0.519440	8_4:-47559722	Msa1329200:intron
TGAAAGTGGTAGCATGTTTG+AGG	0.520691	8_4:-47559880	Msa1329200:exon
TTCTGAGGATTCTATGGAGA+AGG	0.527244	8_4:-47558435	Msa1329200:CDS
CCAGAGTACATCACTTGCCT+CGG	0.527458	8_4:-47559756	Msa1329200:CDS
TACATTGAAGCTTGTGAAAG+TGG	0.531816	8_4:-47559894	Msa1329200:five_prime_UTR
TAAGATAAAGTAGAAACTGT+TGG	0.533052	8_4:-47558155	Msa1329200:three_prime_UTR
CCGAGGCAAGTGATGTACTC+TGG	0.534621	8_4:+47559756	None:intergenic
GGGATCTGTATAGTGTTGCT+TGG	0.535533	8_4:-47559734	Msa1329200:CDS
CCGTCTCCGCAATCTTCTCA+AGG	0.541335	8_4:+47558922	None:intergenic
GATCCTAGTTTGTCATTGTG+AGG	0.542298	8_4:+47559134	None:intergenic
TAAAGTAGAAACTGTTGGGT+AGG	0.543063	8_4:-47558150	Msa1329200:three_prime_UTR
TTGCAACAGCGGTGTTTCTG+AGG	0.547552	8_4:-47558450	Msa1329200:CDS
TTATAGTGCTTAACTTTGTG+TGG	0.550783	8_4:-47558354	Msa1329200:exon
TTTGCAATTGAGAGAATGGT+TGG	0.552160	8_4:-47558082	Msa1329200:three_prime_UTR
CATGTATAGCAGCATGTGGT+GGG	0.553960	8_4:-47558412	Msa1329200:CDS
TAAGAGATTAGATCATCAAA+CGG	0.556011	8_4:-47558961	Msa1329200:CDS
TTGCGGAGACGGTGAAACAT+AGG	0.557136	8_4:-47558911	Msa1329200:CDS
TTATGTTGAACATATATTGG+AGG	0.557765	8_4:+47558223	None:intergenic
TTAGTTGTGAAAGAGTAAGC+AGG	0.560252	8_4:-47558184	Msa1329200:three_prime_UTR
CAAGTGATGTACTCTGGAGG+TGG	0.562964	8_4:+47559762	None:intergenic
GTTTGTCATTGTGAGGAGGA+AGG	0.567849	8_4:+47559141	None:intergenic
GAAAGTGGTAGCATGTTTGA+GGG	0.570395	8_4:-47559879	Msa1329200:exon
GAAAAGCTATATTTGTACCA+AGG	0.574916	8_4:-47559185	Msa1329200:CDS
TTGCAATTGAGAGAATGGTT+GGG	0.585076	8_4:-47558081	Msa1329200:three_prime_UTR
GCATGTATAGCAGCATGTGG+TGG	0.587228	8_4:-47558413	Msa1329200:CDS
GGTTGTTTGAAACTCACTGT+GGG	0.596816	8_4:-47558520	Msa1329200:CDS
TTGGGAATGCTTAAAATCAA+GGG	0.601497	8_4:-47558778	Msa1329200:intron
GTTTGAGGGTGTCATGCCAA+AGG	0.603641	8_4:-47559865	Msa1329200:CDS
CAAGCACATCACAAGAAATG+TGG	0.603856	8_4:-47558112	Msa1329200:three_prime_UTR
TTTGCGAACATTTGCAACAG+CGG	0.609184	8_4:-47558461	Msa1329200:CDS
CATTCCCAATCATCAACAAG+AGG	0.612472	8_4:+47558792	None:intergenic
ATTGAGAGAATGGTTGGGTG+AGG	0.617217	8_4:-47558076	Msa1329200:three_prime_UTR
CCTAGTTTGTCATTGTGAGG+AGG	0.618985	8_4:+47559137	None:intergenic
CGGTTGTTTGAAACTCACTG+TGG	0.619149	8_4:-47558521	Msa1329200:CDS
GGGAACTTACTGTCCTGGAG+TGG	0.620628	8_4:-47559793	Msa1329200:CDS
AGAAATCCTTGAGAAGATTG+CGG	0.621530	8_4:-47558928	Msa1329200:CDS
TCATCAACAAGAGGTAGACC+AGG	0.625602	8_4:+47558801	None:intergenic
ATCTTGTGCAGGTTAAAGAA+CGG	0.627923	8_4:-47559277	Msa1329200:intron
CCGTTGCAGGATCAAAACCT+TGG	0.635618	8_4:+47559168	None:intergenic
AATGCACAAGAGAGTAGTTG+GGG	0.641706	8_4:-47559813	Msa1329200:CDS
GTGGGTCACTGACACAGTAT+GGG	0.645354	8_4:-47558502	Msa1329200:CDS
GAATCATTTAGATGGTAGCG+TGG	0.666047	8_4:-47558889	Msa1329200:CDS
AGGCAAGTGATGTACTCTGG+AGG	0.685308	8_4:+47559759	None:intergenic
AAGGCATGTATAGCAGCATG+TGG	0.690392	8_4:-47558416	Msa1329200:CDS
AGAGTACATCACTTGCCTCG+GGG	0.692967	8_4:-47559754	Msa1329200:CDS
CTATTACATCCATCAAACAG+AGG	0.726919	8_4:-47558377	Msa1329200:CDS
CAACACTATACAGATCCCCG+AGG	0.792205	8_4:+47559739	None:intergenic

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!!	TTTTTAAATGATTTGCAATT+AGG	+	chr8_4:47558310-47558329	None:intergenic	15.0%
!!!	TTTTTAAATGATTTGCAATT+AGG	+	chr8_4:47558310-47558329	None:intergenic	15.0%
!!!	ATTTGGTTGATAATAAGTTA+AGG	+	chr8_4:47558892-47558911	None:intergenic	20.0%
!!	TTGATAAAATATAATCAGTG+TGG	-	chr8_4:47559286-47559305	Msa1329200:intron	20.0%
!!	CTTATTAGTATAACATACAA+TGG	-	chr8_4:47559351-47559370	Msa1329200:intron	20.0%
!!	ACATTATGTTGAACATATAT+TGG	+	chr8_4:47559715-47559734	None:intergenic	20.0%
!!!	GATGATTGTTTTAGTATTTT+TGG	-	chr8_4:47559878-47559897	Msa1329200:exon	20.0%
!!!	ATTTGGTTGATAATAAGTTA+AGG	+	chr8_4:47558892-47558911	None:intergenic	20.0%
!!	TTGATAAAATATAATCAGTG+TGG	-	chr8_4:47559286-47559305	Msa1329200:intron	20.0%
!!	CTTATTAGTATAACATACAA+TGG	-	chr8_4:47559351-47559370	Msa1329200:intron	20.0%
!!	ACATTATGTTGAACATATAT+TGG	+	chr8_4:47559715-47559734	None:intergenic	20.0%
!!!	GATGATTGTTTTAGTATTTT+TGG	-	chr8_4:47559878-47559897	Msa1329200:exon	20.0%
!	ACATAAACATTAAGATCCTT+TGG	+	chr8_4:47558086-47558105	None:intergenic	25.0%
!	TCACATTAATTCCAAATAGT+CGG	+	chr8_4:47558245-47558264	None:intergenic	25.0%
!	TTCATTTCAAACATTTCCTT+TGG	-	chr8_4:47558473-47558492	Msa1329200:CDS	25.0%
!	TTAACTTTCTTATTCTTCTC+CGG	+	chr8_4:47558614-47558633	None:intergenic	25.0%
!!!	TATGTTTTAATATCTTGTGC+AGG	-	chr8_4:47558644-47558663	Msa1329200:intron	25.0%
!	AATTACAACAACTATGCATT+AGG	-	chr8_4:47558684-47558703	Msa1329200:intron	25.0%
!!	TTGATAATAAGTTAAGGTTG+AGG	+	chr8_4:47558886-47558905	None:intergenic	25.0%
!	ATCTAATCTCTTATACTGAA+AGG	+	chr8_4:47558964-47558983	None:intergenic	25.0%
!	TAAGAGATTAGATCATCAAA+CGG	-	chr8_4:47558971-47558990	Msa1329200:intron	25.0%
!	AAACATAGGAATCATTTAGA+TGG	-	chr8_4:47559035-47559054	Msa1329200:intron	25.0%
!	TTATGTTGAACATATATTGG+AGG	+	chr8_4:47559712-47559731	None:intergenic	25.0%
!	AACAGTTTCTACTTTATCTT+AGG	+	chr8_4:47559778-47559797	None:intergenic	25.0%
!	TAAGATAAAGTAGAAACTGT+TGG	-	chr8_4:47559777-47559796	Msa1329200:CDS	25.0%
!	AAGATAAAGTAGAAACTGTT+GGG	-	chr8_4:47559778-47559797	Msa1329200:CDS	25.0%
!	ACATAAACATTAAGATCCTT+TGG	+	chr8_4:47558086-47558105	None:intergenic	25.0%
!	TCACATTAATTCCAAATAGT+CGG	+	chr8_4:47558245-47558264	None:intergenic	25.0%
!	TTCATTTCAAACATTTCCTT+TGG	-	chr8_4:47558473-47558492	Msa1329200:CDS	25.0%
!	TTAACTTTCTTATTCTTCTC+CGG	+	chr8_4:47558614-47558633	None:intergenic	25.0%
!!!	TATGTTTTAATATCTTGTGC+AGG	-	chr8_4:47558644-47558663	Msa1329200:intron	25.0%
!	AATTACAACAACTATGCATT+AGG	-	chr8_4:47558684-47558703	Msa1329200:intron	25.0%
!!	TTGATAATAAGTTAAGGTTG+AGG	+	chr8_4:47558886-47558905	None:intergenic	25.0%
!	ATCTAATCTCTTATACTGAA+AGG	+	chr8_4:47558964-47558983	None:intergenic	25.0%
!	TAAGAGATTAGATCATCAAA+CGG	-	chr8_4:47558971-47558990	Msa1329200:intron	25.0%
!	AAACATAGGAATCATTTAGA+TGG	-	chr8_4:47559035-47559054	Msa1329200:intron	25.0%
!	TTATGTTGAACATATATTGG+AGG	+	chr8_4:47559712-47559731	None:intergenic	25.0%
!	AACAGTTTCTACTTTATCTT+AGG	+	chr8_4:47559778-47559797	None:intergenic	25.0%
!	TAAGATAAAGTAGAAACTGT+TGG	-	chr8_4:47559777-47559796	Msa1329200:CDS	25.0%
!	AAGATAAAGTAGAAACTGTT+GGG	-	chr8_4:47559778-47559797	Msa1329200:CDS	25.0%
!	ACACTTGTTAATTACTCAGT+AGG	+	chr8_4:47558429-47558448	None:intergenic	30.0%
	GGTGAAACAACAATACAAAT+CGG	-	chr8_4:47558537-47558556	Msa1329200:intron	30.0%
	AACAACAATACAAATCGGTA+AGG	-	chr8_4:47558542-47558561	Msa1329200:intron	30.0%
!	TAGCTTTTCATCTGTAATGT+TGG	+	chr8_4:47558736-47558755	None:intergenic	30.0%
	GAAAAGCTATATTTGTACCA+AGG	-	chr8_4:47558747-47558766	Msa1329200:intron	30.0%
	TGACAAACTAGGATCTAAAA+TGG	-	chr8_4:47558806-47558825	Msa1329200:CDS	30.0%
	ATAAAATCTCTGCATCTCTT+TGG	+	chr8_4:47558842-47558861	None:intergenic	30.0%
!	ATGCAGAGATTTTATTCATG+TGG	-	chr8_4:47558847-47558866	Msa1329200:CDS	30.0%
!	TGCAGAGATTTTATTCATGT+GGG	-	chr8_4:47558848-47558867	Msa1329200:CDS	30.0%
!	GATTTTATTCATGTGGGAAA+TGG	-	chr8_4:47558854-47558873	Msa1329200:CDS	30.0%
	CAATCATTTGAACAAGGATT+TGG	+	chr8_4:47558909-47558928	None:intergenic	30.0%
!	TTGATTGGAGTTTTACTGTT+TGG	-	chr8_4:47559068-47559087	Msa1329200:intron	30.0%
	ATTGGGAATGCTTAAAATCA+AGG	-	chr8_4:47559153-47559172	Msa1329200:CDS	30.0%
	TTGGGAATGCTTAAAATCAA+GGG	-	chr8_4:47559154-47559173	Msa1329200:CDS	30.0%
	TAAGTTATGAAGACAGATGT+CGG	+	chr8_4:47559335-47559354	None:intergenic	30.0%
	TTATAGTGCTTAACTTTGTG+TGG	-	chr8_4:47559578-47559597	Msa1329200:intron	30.0%
!	GTAATTTGCAATTGAGAGAA+TGG	-	chr8_4:47559846-47559865	Msa1329200:CDS	30.0%
!	ACACTTGTTAATTACTCAGT+AGG	+	chr8_4:47558429-47558448	None:intergenic	30.0%
	GGTGAAACAACAATACAAAT+CGG	-	chr8_4:47558537-47558556	Msa1329200:intron	30.0%
	AACAACAATACAAATCGGTA+AGG	-	chr8_4:47558542-47558561	Msa1329200:intron	30.0%
!	TAGCTTTTCATCTGTAATGT+TGG	+	chr8_4:47558736-47558755	None:intergenic	30.0%
	GAAAAGCTATATTTGTACCA+AGG	-	chr8_4:47558747-47558766	Msa1329200:intron	30.0%
	TGACAAACTAGGATCTAAAA+TGG	-	chr8_4:47558806-47558825	Msa1329200:CDS	30.0%
	ATAAAATCTCTGCATCTCTT+TGG	+	chr8_4:47558842-47558861	None:intergenic	30.0%
!	ATGCAGAGATTTTATTCATG+TGG	-	chr8_4:47558847-47558866	Msa1329200:CDS	30.0%
!	TGCAGAGATTTTATTCATGT+GGG	-	chr8_4:47558848-47558867	Msa1329200:CDS	30.0%
!	GATTTTATTCATGTGGGAAA+TGG	-	chr8_4:47558854-47558873	Msa1329200:CDS	30.0%
	CAATCATTTGAACAAGGATT+TGG	+	chr8_4:47558909-47558928	None:intergenic	30.0%
!	TTGATTGGAGTTTTACTGTT+TGG	-	chr8_4:47559068-47559087	Msa1329200:intron	30.0%
	ATTGGGAATGCTTAAAATCA+AGG	-	chr8_4:47559153-47559172	Msa1329200:CDS	30.0%
	TTGGGAATGCTTAAAATCAA+GGG	-	chr8_4:47559154-47559173	Msa1329200:CDS	30.0%
	TAAGTTATGAAGACAGATGT+CGG	+	chr8_4:47559335-47559354	None:intergenic	30.0%
	TTATAGTGCTTAACTTTGTG+TGG	-	chr8_4:47559578-47559597	Msa1329200:intron	30.0%
!	GTAATTTGCAATTGAGAGAA+TGG	-	chr8_4:47559846-47559865	Msa1329200:CDS	30.0%
!	GTGTGATTTTGTGCTTGTAT+AGG	-	chr8_4:47558010-47558029	Msa1329200:three_prime_UTR	35.0%
	TACATTGAAGCTTGTGAAAG+TGG	-	chr8_4:47558038-47558057	Msa1329200:three_prime_UTR	35.0%
!!	GGTATATTTTGCCGACTATT+TGG	-	chr8_4:47558231-47558250	Msa1329200:three_prime_UTR	35.0%
	ATGTTTGCATCCCTAAATTC+AGG	-	chr8_4:47558282-47558301	Msa1329200:three_prime_UTR	35.0%
	TGTTTGCATCCCTAAATTCA+GGG	-	chr8_4:47558283-47558302	Msa1329200:three_prime_UTR	35.0%
	CAATTAGGTCCCTGAATTTA+GGG	+	chr8_4:47558295-47558314	None:intergenic	35.0%
	TTAATTACTCAGTAGGTCAC+TGG	+	chr8_4:47558422-47558441	None:intergenic	35.0%
	CACTGCATAATTCAAACCAA+AGG	+	chr8_4:47558492-47558511	None:intergenic	35.0%
	TGAGTCGCACAATCTAAAAA+GGG	-	chr8_4:47558510-47558529	Msa1329200:CDS	35.0%
	GCACAATCTAAAAAGGGAAA+CGG	-	chr8_4:47558516-47558535	Msa1329200:CDS	35.0%
	AGTATCCCTATTAGCATTTC+CGG	-	chr8_4:47558592-47558611	Msa1329200:intron	35.0%
	ATCTTGTGCAGGTTAAAGAA+CGG	-	chr8_4:47558655-47558674	Msa1329200:intron	35.0%
	ACTGCACAATCATTTGAACA+AGG	+	chr8_4:47558915-47558934	None:intergenic	35.0%
	AGAAATCCTTGAGAAGATTG+CGG	-	chr8_4:47559004-47559023	Msa1329200:intron	35.0%
	TTACTGTTTGGTCCAACAAA+AGG	-	chr8_4:47559080-47559099	Msa1329200:CDS	35.0%
!	AGAACTGAAGAACCTTTTGT+TGG	+	chr8_4:47559095-47559114	None:intergenic	35.0%
	AAAAGGTTCTTCAGTTCTAC+AGG	-	chr8_4:47559097-47559116	Msa1329200:CDS	35.0%
!!	TCTACCTCTTGTTGATGATT+GGG	-	chr8_4:47559136-47559155	Msa1329200:CDS	35.0%
	TACGTTATCGATGTTCGATT+TGG	-	chr8_4:47559377-47559396	Msa1329200:intron	35.0%
!!!	GATGTTCGATTTGGTTTTGT+AGG	-	chr8_4:47559386-47559405	Msa1329200:intron	35.0%
!!!	TCGATTTGGTTTTGTAGGTT+CGG	-	chr8_4:47559391-47559410	Msa1329200:intron	35.0%
	CTATTACATCCATCAAACAG+AGG	-	chr8_4:47559555-47559574	Msa1329200:intron	35.0%
	TTAGTTGTGAAAGAGTAAGC+AGG	-	chr8_4:47559748-47559767	Msa1329200:CDS	35.0%
	TAAAGTAGAAACTGTTGGGT+AGG	-	chr8_4:47559782-47559801	Msa1329200:CDS	35.0%
	TTTGCAATTGAGAGAATGGT+TGG	-	chr8_4:47559850-47559869	Msa1329200:CDS	35.0%
	TTGCAATTGAGAGAATGGTT+GGG	-	chr8_4:47559851-47559870	Msa1329200:CDS	35.0%
!	GTGTGATTTTGTGCTTGTAT+AGG	-	chr8_4:47558010-47558029	Msa1329200:three_prime_UTR	35.0%
	TACATTGAAGCTTGTGAAAG+TGG	-	chr8_4:47558038-47558057	Msa1329200:three_prime_UTR	35.0%
!!	GGTATATTTTGCCGACTATT+TGG	-	chr8_4:47558231-47558250	Msa1329200:three_prime_UTR	35.0%
	ATGTTTGCATCCCTAAATTC+AGG	-	chr8_4:47558282-47558301	Msa1329200:three_prime_UTR	35.0%
	TGTTTGCATCCCTAAATTCA+GGG	-	chr8_4:47558283-47558302	Msa1329200:three_prime_UTR	35.0%
	CAATTAGGTCCCTGAATTTA+GGG	+	chr8_4:47558295-47558314	None:intergenic	35.0%
	TTAATTACTCAGTAGGTCAC+TGG	+	chr8_4:47558422-47558441	None:intergenic	35.0%
	CACTGCATAATTCAAACCAA+AGG	+	chr8_4:47558492-47558511	None:intergenic	35.0%
	TGAGTCGCACAATCTAAAAA+GGG	-	chr8_4:47558510-47558529	Msa1329200:CDS	35.0%
	GCACAATCTAAAAAGGGAAA+CGG	-	chr8_4:47558516-47558535	Msa1329200:CDS	35.0%
	AGTATCCCTATTAGCATTTC+CGG	-	chr8_4:47558592-47558611	Msa1329200:intron	35.0%
	ATCTTGTGCAGGTTAAAGAA+CGG	-	chr8_4:47558655-47558674	Msa1329200:intron	35.0%
	ACTGCACAATCATTTGAACA+AGG	+	chr8_4:47558915-47558934	None:intergenic	35.0%
	AGAAATCCTTGAGAAGATTG+CGG	-	chr8_4:47559004-47559023	Msa1329200:intron	35.0%
	TTACTGTTTGGTCCAACAAA+AGG	-	chr8_4:47559080-47559099	Msa1329200:CDS	35.0%
!	AGAACTGAAGAACCTTTTGT+TGG	+	chr8_4:47559095-47559114	None:intergenic	35.0%
	AAAAGGTTCTTCAGTTCTAC+AGG	-	chr8_4:47559097-47559116	Msa1329200:CDS	35.0%
!!	TCTACCTCTTGTTGATGATT+GGG	-	chr8_4:47559136-47559155	Msa1329200:CDS	35.0%
	TACGTTATCGATGTTCGATT+TGG	-	chr8_4:47559377-47559396	Msa1329200:intron	35.0%
!!!	GATGTTCGATTTGGTTTTGT+AGG	-	chr8_4:47559386-47559405	Msa1329200:intron	35.0%
!!!	TCGATTTGGTTTTGTAGGTT+CGG	-	chr8_4:47559391-47559410	Msa1329200:intron	35.0%
	CTATTACATCCATCAAACAG+AGG	-	chr8_4:47559555-47559574	Msa1329200:intron	35.0%
	TTAGTTGTGAAAGAGTAAGC+AGG	-	chr8_4:47559748-47559767	Msa1329200:CDS	35.0%
	TAAAGTAGAAACTGTTGGGT+AGG	-	chr8_4:47559782-47559801	Msa1329200:CDS	35.0%
	TTTGCAATTGAGAGAATGGT+TGG	-	chr8_4:47559850-47559869	Msa1329200:CDS	35.0%
	TTGCAATTGAGAGAATGGTT+GGG	-	chr8_4:47559851-47559870	Msa1329200:CDS	35.0%
	TGAAAGTGGTAGCATGTTTG+AGG	-	chr8_4:47558052-47558071	Msa1329200:three_prime_UTR	40.0%
	GAAAGTGGTAGCATGTTTGA+GGG	-	chr8_4:47558053-47558072	Msa1329200:three_prime_UTR	40.0%
	CAATGCACAAGAGAGTAGTT+GGG	-	chr8_4:47558118-47558137	Msa1329200:three_prime_UTR	40.0%
	AATGCACAAGAGAGTAGTTG+GGG	-	chr8_4:47558119-47558138	Msa1329200:three_prime_UTR	40.0%
!!	TCTGTATAGTGTTGCTTGGA+TGG	-	chr8_4:47558202-47558221	Msa1329200:three_prime_UTR	40.0%
	GCAATTAGGTCCCTGAATTT+AGG	+	chr8_4:47558296-47558315	None:intergenic	40.0%
	GTGAGTCGCACAATCTAAAA+AGG	-	chr8_4:47558509-47558528	Msa1329200:CDS	40.0%
	CTTCTCCGGAAATGCTAATA+GGG	+	chr8_4:47558600-47558619	None:intergenic	40.0%
	TCTTCTCCGGAAATGCTAAT+AGG	+	chr8_4:47558601-47558620	None:intergenic	40.0%
	GGTTCTCATGTGATGCAATA+TGG	-	chr8_4:47558705-47558724	Msa1329200:intron	40.0%
!	GATCCTAGTTTGTCATTGTG+AGG	+	chr8_4:47558801-47558820	None:intergenic	40.0%
!	GAATCATTTAGATGGTAGCG+TGG	-	chr8_4:47559043-47559062	Msa1329200:intron	40.0%
!!	GTCTACCTCTTGTTGATGAT+TGG	-	chr8_4:47559135-47559154	Msa1329200:CDS	40.0%
	CATTCCCAATCATCAACAAG+AGG	+	chr8_4:47559143-47559162	None:intergenic	40.0%
!	GGTTGTTTGAAACTCACTGT+GGG	-	chr8_4:47559412-47559431	Msa1329200:CDS	40.0%
	TTTGCGAACATTTGCAACAG+CGG	-	chr8_4:47559471-47559490	Msa1329200:intron	40.0%
!	TTCTGAGGATTCTATGGAGA+AGG	-	chr8_4:47559497-47559516	Msa1329200:intron	40.0%
	GCACTATAACCTCTGTTTGA+TGG	+	chr8_4:47559567-47559586	None:intergenic	40.0%
	ACTTTGTGTGGTACACTACA+TGG	-	chr8_4:47559590-47559609	Msa1329200:intron	40.0%
	CTCGTCAATTGTGAAATTGC+TGG	-	chr8_4:47559646-47559665	Msa1329200:intron	40.0%
!	ACATATATTGGAGGCGCATA+GGG	+	chr8_4:47559703-47559722	None:intergenic	40.0%
!	AACATATATTGGAGGCGCAT+AGG	+	chr8_4:47559704-47559723	None:intergenic	40.0%
	CAAGCACATCACAAGAAATG+TGG	-	chr8_4:47559820-47559839	Msa1329200:CDS	40.0%
	TGAAAGTGGTAGCATGTTTG+AGG	-	chr8_4:47558052-47558071	Msa1329200:three_prime_UTR	40.0%
	GAAAGTGGTAGCATGTTTGA+GGG	-	chr8_4:47558053-47558072	Msa1329200:three_prime_UTR	40.0%
	CAATGCACAAGAGAGTAGTT+GGG	-	chr8_4:47558118-47558137	Msa1329200:three_prime_UTR	40.0%
	AATGCACAAGAGAGTAGTTG+GGG	-	chr8_4:47558119-47558138	Msa1329200:three_prime_UTR	40.0%
!!	TCTGTATAGTGTTGCTTGGA+TGG	-	chr8_4:47558202-47558221	Msa1329200:three_prime_UTR	40.0%
	GCAATTAGGTCCCTGAATTT+AGG	+	chr8_4:47558296-47558315	None:intergenic	40.0%
	GTGAGTCGCACAATCTAAAA+AGG	-	chr8_4:47558509-47558528	Msa1329200:CDS	40.0%
	CTTCTCCGGAAATGCTAATA+GGG	+	chr8_4:47558600-47558619	None:intergenic	40.0%
	TCTTCTCCGGAAATGCTAAT+AGG	+	chr8_4:47558601-47558620	None:intergenic	40.0%
	GGTTCTCATGTGATGCAATA+TGG	-	chr8_4:47558705-47558724	Msa1329200:intron	40.0%
!	GATCCTAGTTTGTCATTGTG+AGG	+	chr8_4:47558801-47558820	None:intergenic	40.0%
!	GAATCATTTAGATGGTAGCG+TGG	-	chr8_4:47559043-47559062	Msa1329200:intron	40.0%
!!	GTCTACCTCTTGTTGATGAT+TGG	-	chr8_4:47559135-47559154	Msa1329200:CDS	40.0%
	CATTCCCAATCATCAACAAG+AGG	+	chr8_4:47559143-47559162	None:intergenic	40.0%
!	GGTTGTTTGAAACTCACTGT+GGG	-	chr8_4:47559412-47559431	Msa1329200:CDS	40.0%
	TTTGCGAACATTTGCAACAG+CGG	-	chr8_4:47559471-47559490	Msa1329200:intron	40.0%
!	TTCTGAGGATTCTATGGAGA+AGG	-	chr8_4:47559497-47559516	Msa1329200:intron	40.0%
	GCACTATAACCTCTGTTTGA+TGG	+	chr8_4:47559567-47559586	None:intergenic	40.0%
	ACTTTGTGTGGTACACTACA+TGG	-	chr8_4:47559590-47559609	Msa1329200:intron	40.0%
	CTCGTCAATTGTGAAATTGC+TGG	-	chr8_4:47559646-47559665	Msa1329200:intron	40.0%
!	ACATATATTGGAGGCGCATA+GGG	+	chr8_4:47559703-47559722	None:intergenic	40.0%
!	AACATATATTGGAGGCGCAT+AGG	+	chr8_4:47559704-47559723	None:intergenic	40.0%
	CAAGCACATCACAAGAAATG+TGG	-	chr8_4:47559820-47559839	Msa1329200:CDS	40.0%
	CCAACTACTCTCTTGTGCAT+TGG	+	chr8_4:47558120-47558139	None:intergenic	45.0%
	CCAATGCACAAGAGAGTAGT+TGG	-	chr8_4:47558117-47558136	Msa1329200:three_prime_UTR	45.0%
!	GGGATCTGTATAGTGTTGCT+TGG	-	chr8_4:47558198-47558217	Msa1329200:three_prime_UTR	45.0%
	CAGTAGGTCACTGGACTATT+TGG	+	chr8_4:47558413-47558432	None:intergenic	45.0%
!!	CCAAGGTTTTGATCCTGCAA+CGG	-	chr8_4:47558764-47558783	Msa1329200:intron	45.0%
	GTTTGTCATTGTGAGGAGGA+AGG	+	chr8_4:47558794-47558813	None:intergenic	45.0%
!	CCTAGTTTGTCATTGTGAGG+AGG	+	chr8_4:47558798-47558817	None:intergenic	45.0%
	CCTCCTCACAATGACAAACT+AGG	-	chr8_4:47558795-47558814	Msa1329200:CDS	45.0%
!	GATGGTAGCGTGGAATTGAT+TGG	-	chr8_4:47559053-47559072	Msa1329200:intron	45.0%
	TCATCAACAAGAGGTAGACC+AGG	+	chr8_4:47559134-47559153	None:intergenic	45.0%
!	CCTGAAGGCATGTCTAGTAT+CGG	-	chr8_4:47559233-47559252	Msa1329200:CDS	45.0%
!	CGGTTGTTTGAAACTCACTG+TGG	-	chr8_4:47559411-47559430	Msa1329200:CDS	45.0%
!	CGGTGTTTCTGAGGATTCTA+TGG	-	chr8_4:47559491-47559510	Msa1329200:intron	45.0%
	AAGGCATGTATAGCAGCATG+TGG	-	chr8_4:47559516-47559535	Msa1329200:intron	45.0%
	CATGTATAGCAGCATGTGGT+GGG	-	chr8_4:47559520-47559539	Msa1329200:intron	45.0%
	ATTGAGAGAATGGTTGGGTG+AGG	-	chr8_4:47559856-47559875	Msa1329200:CDS	45.0%
	CCAACTACTCTCTTGTGCAT+TGG	+	chr8_4:47558120-47558139	None:intergenic	45.0%
	CCAATGCACAAGAGAGTAGT+TGG	-	chr8_4:47558117-47558136	Msa1329200:three_prime_UTR	45.0%
!	GGGATCTGTATAGTGTTGCT+TGG	-	chr8_4:47558198-47558217	Msa1329200:three_prime_UTR	45.0%
	CAGTAGGTCACTGGACTATT+TGG	+	chr8_4:47558413-47558432	None:intergenic	45.0%
!!	CCAAGGTTTTGATCCTGCAA+CGG	-	chr8_4:47558764-47558783	Msa1329200:intron	45.0%
	GTTTGTCATTGTGAGGAGGA+AGG	+	chr8_4:47558794-47558813	None:intergenic	45.0%
!	CCTAGTTTGTCATTGTGAGG+AGG	+	chr8_4:47558798-47558817	None:intergenic	45.0%
	CCTCCTCACAATGACAAACT+AGG	-	chr8_4:47558795-47558814	Msa1329200:CDS	45.0%
!	GATGGTAGCGTGGAATTGAT+TGG	-	chr8_4:47559053-47559072	Msa1329200:intron	45.0%
	TCATCAACAAGAGGTAGACC+AGG	+	chr8_4:47559134-47559153	None:intergenic	45.0%
!	CCTGAAGGCATGTCTAGTAT+CGG	-	chr8_4:47559233-47559252	Msa1329200:CDS	45.0%
!	CGGTTGTTTGAAACTCACTG+TGG	-	chr8_4:47559411-47559430	Msa1329200:CDS	45.0%
!	CGGTGTTTCTGAGGATTCTA+TGG	-	chr8_4:47559491-47559510	Msa1329200:intron	45.0%
	AAGGCATGTATAGCAGCATG+TGG	-	chr8_4:47559516-47559535	Msa1329200:intron	45.0%
	CATGTATAGCAGCATGTGGT+GGG	-	chr8_4:47559520-47559539	Msa1329200:intron	45.0%
	ATTGAGAGAATGGTTGGGTG+AGG	-	chr8_4:47559856-47559875	Msa1329200:CDS	45.0%
!!!	AAATTAAAATGTTTTTAATT+GGG	+	chr8_4:47558341-47558360	None:intergenic	5.0%
!!!	TAAATTAAAATGTTTTTAAT+TGG	+	chr8_4:47558342-47558361	None:intergenic	5.0%
!!!	AAATTAAAATGTTTTTAATT+GGG	+	chr8_4:47558341-47558360	None:intergenic	5.0%
!!!	TAAATTAAAATGTTTTTAAT+TGG	+	chr8_4:47558342-47558361	None:intergenic	5.0%
!!	GTTTGAGGGTGTCATGCCAA+AGG	-	chr8_4:47558067-47558086	Msa1329200:three_prime_UTR	50.0%
	AGTTGGGGAACTTACTGTCC+TGG	-	chr8_4:47558134-47558153	Msa1329200:three_prime_UTR	50.0%
!	CAAGTGATGTACTCTGGAGG+TGG	+	chr8_4:47558173-47558192	None:intergenic	50.0%
	AGGCAAGTGATGTACTCTGG+AGG	+	chr8_4:47558176-47558195	None:intergenic	50.0%
	CCAGAGTACATCACTTGCCT+CGG	-	chr8_4:47558176-47558195	Msa1329200:three_prime_UTR	50.0%
	CAGAGTACATCACTTGCCTC+GGG	-	chr8_4:47558177-47558196	Msa1329200:three_prime_UTR	50.0%
	AGAGTACATCACTTGCCTCG+GGG	-	chr8_4:47558178-47558197	Msa1329200:three_prime_UTR	50.0%
	CAACACTATACAGATCCCCG+AGG	+	chr8_4:47558196-47558215	None:intergenic	50.0%
!!	GTGTTGCTTGGATGGAAGAC+AGG	-	chr8_4:47558210-47558229	Msa1329200:three_prime_UTR	50.0%
	CCGTTGCAGGATCAAAACCT+TGG	+	chr8_4:47558767-47558786	None:intergenic	50.0%
	CCTTGAGAAGATTGCGGAGA+CGG	-	chr8_4:47559010-47559029	Msa1329200:intron	50.0%
	TTGCGGAGACGGTGAAACAT+AGG	-	chr8_4:47559021-47559040	Msa1329200:intron	50.0%
	CTACAGGCTCTTAGAGAACC+TGG	-	chr8_4:47559113-47559132	Msa1329200:CDS	50.0%
	AGCACGACACTTTCACCTGA+AGG	-	chr8_4:47559218-47559237	Msa1329200:CDS	50.0%
	CCGATACTAGACATGCCTTC+AGG	+	chr8_4:47559236-47559255	None:intergenic	50.0%
	TGTGGGTCACTGACACAGTA+TGG	-	chr8_4:47559429-47559448	Msa1329200:intron	50.0%
	GTGGGTCACTGACACAGTAT+GGG	-	chr8_4:47559430-47559449	Msa1329200:intron	50.0%
!	TTGCAACAGCGGTGTTTCTG+AGG	-	chr8_4:47559482-47559501	Msa1329200:intron	50.0%
	GCATGTATAGCAGCATGTGG+TGG	-	chr8_4:47559519-47559538	Msa1329200:intron	50.0%
!!	GTTTGAGGGTGTCATGCCAA+AGG	-	chr8_4:47558067-47558086	Msa1329200:three_prime_UTR	50.0%
	AGTTGGGGAACTTACTGTCC+TGG	-	chr8_4:47558134-47558153	Msa1329200:three_prime_UTR	50.0%
!	CAAGTGATGTACTCTGGAGG+TGG	+	chr8_4:47558173-47558192	None:intergenic	50.0%
	AGGCAAGTGATGTACTCTGG+AGG	+	chr8_4:47558176-47558195	None:intergenic	50.0%
	CCAGAGTACATCACTTGCCT+CGG	-	chr8_4:47558176-47558195	Msa1329200:three_prime_UTR	50.0%
	CAGAGTACATCACTTGCCTC+GGG	-	chr8_4:47558177-47558196	Msa1329200:three_prime_UTR	50.0%
	AGAGTACATCACTTGCCTCG+GGG	-	chr8_4:47558178-47558197	Msa1329200:three_prime_UTR	50.0%
	CAACACTATACAGATCCCCG+AGG	+	chr8_4:47558196-47558215	None:intergenic	50.0%
!!	GTGTTGCTTGGATGGAAGAC+AGG	-	chr8_4:47558210-47558229	Msa1329200:three_prime_UTR	50.0%
	CCGTTGCAGGATCAAAACCT+TGG	+	chr8_4:47558767-47558786	None:intergenic	50.0%
	CCTTGAGAAGATTGCGGAGA+CGG	-	chr8_4:47559010-47559029	Msa1329200:intron	50.0%
	TTGCGGAGACGGTGAAACAT+AGG	-	chr8_4:47559021-47559040	Msa1329200:intron	50.0%
	CTACAGGCTCTTAGAGAACC+TGG	-	chr8_4:47559113-47559132	Msa1329200:CDS	50.0%
	AGCACGACACTTTCACCTGA+AGG	-	chr8_4:47559218-47559237	Msa1329200:CDS	50.0%
	CCGATACTAGACATGCCTTC+AGG	+	chr8_4:47559236-47559255	None:intergenic	50.0%
	TGTGGGTCACTGACACAGTA+TGG	-	chr8_4:47559429-47559448	Msa1329200:intron	50.0%
	GTGGGTCACTGACACAGTAT+GGG	-	chr8_4:47559430-47559449	Msa1329200:intron	50.0%
!	TTGCAACAGCGGTGTTTCTG+AGG	-	chr8_4:47559482-47559501	Msa1329200:intron	50.0%
	GCATGTATAGCAGCATGTGG+TGG	-	chr8_4:47559519-47559538	Msa1329200:intron	50.0%
	GGGAACTTACTGTCCTGGAG+TGG	-	chr8_4:47558139-47558158	Msa1329200:three_prime_UTR	55.0%
!	ATGTACTCTGGAGGTGGAGC+AGG	+	chr8_4:47558167-47558186	None:intergenic	55.0%
	CCGAGGCAAGTGATGTACTC+TGG	+	chr8_4:47558179-47558198	None:intergenic	55.0%
	CCGTCTCCGCAATCTTCTCA+AGG	+	chr8_4:47559013-47559032	None:intergenic	55.0%
	GGGAACTTACTGTCCTGGAG+TGG	-	chr8_4:47558139-47558158	Msa1329200:three_prime_UTR	55.0%
!	ATGTACTCTGGAGGTGGAGC+AGG	+	chr8_4:47558167-47558186	None:intergenic	55.0%
	CCGAGGCAAGTGATGTACTC+TGG	+	chr8_4:47558179-47558198	None:intergenic	55.0%
	CCGTCTCCGCAATCTTCTCA+AGG	+	chr8_4:47559013-47559032	None:intergenic	55.0%
	GGAGGAAGGTTCACCGTTGC+AGG	+	chr8_4:47558780-47558799	None:intergenic	60.0%
	GGAGGAAGGTTCACCGTTGC+AGG	+	chr8_4:47558780-47558799	None:intergenic	60.0%
	GGTGGAGCAGGTTCCACTCC+AGG	+	chr8_4:47558155-47558174	None:intergenic	65.0%
	GGTGGAGCAGGTTCCACTCC+AGG	+	chr8_4:47558155-47558174	None:intergenic	65.0%

Chromosome	Type	Strat	End	Strand	Name
chr8_4	gene	47557991	47559963	47557991	ID=Msa1329200;Name=Msa1329200
chr8_4	mRNA	47557991	47559963	47557991	ID=Msa1329200-mRNA-1;Parent=Msa1329200;Name=Msa1329200-mRNA-1;_AED=0.06;_eAED=0.06;_QI=74\|1\|1\|1\|1\|1\|5\|373\|271
chr8_4	exon	47557991	47558546	47557991	ID=Msa1329200-mRNA-1:exon:13639;Parent=Msa1329200-mRNA-1
chr8_4	exon	47558779	47558985	47558779	ID=Msa1329200-mRNA-1:exon:13638;Parent=Msa1329200-mRNA-1
chr8_4	exon	47559079	47559288	47559079	ID=Msa1329200-mRNA-1:exon:13637;Parent=Msa1329200-mRNA-1
chr8_4	exon	47559396	47559444	47559396	ID=Msa1329200-mRNA-1:exon:13636;Parent=Msa1329200-mRNA-1
chr8_4	exon	47559723	47559963	47559723	ID=Msa1329200-mRNA-1:exon:13635;Parent=Msa1329200-mRNA-1
chr8_4	five_prime_UTR	47559890	47559963	47559890	ID=Msa1329200-mRNA-1:five_prime_utr;Parent=Msa1329200-mRNA-1
chr8_4	CDS	47559723	47559889	47559723	ID=Msa1329200-mRNA-1:cds;Parent=Msa1329200-mRNA-1
chr8_4	CDS	47559396	47559444	47559396	ID=Msa1329200-mRNA-1:cds;Parent=Msa1329200-mRNA-1
chr8_4	CDS	47559079	47559288	47559079	ID=Msa1329200-mRNA-1:cds;Parent=Msa1329200-mRNA-1
chr8_4	CDS	47558779	47558985	47558779	ID=Msa1329200-mRNA-1:cds;Parent=Msa1329200-mRNA-1
chr8_4	CDS	47558364	47558546	47558364	ID=Msa1329200-mRNA-1:cds;Parent=Msa1329200-mRNA-1
chr8_4	three_prime_UTR	47557991	47558363	47557991	ID=Msa1329200-mRNA-1:three_prime_utr;Parent=Msa1329200-mRNA-1

Gene Sequence

>Msa1329200

ATGTTTGAGGGTGTCATGCCAAAGGATCTTAATGTTTATGTGACAACTGCATCCAATGCACAAGAGAGTAGTTGGGGAACTTACTGTCCTGGAGTGGAACCTGCTCCACCTCCAGAGTACATCACTTGCCTCGGGGATCTGTATAGTGTTGCTTGGATGGAAGACAGTGAGTCGCACAATCTAAAAAGGGAAACGGTGAAACAACAATACAAATCGGTTAAAGAACGGACTTCAAATTACAACAACTATGCATTAGGTTCTCATGTGATGCAATATGGTGATACCAACATTACAGATGAAAAGCTATATTTGTACCAAGGTTTTGATCCTGCAACGGTGAACCTTCCTCCTCACAATGACAAACTAGGATCTAAAATGGAAGTTGTAAACCAAAGAGATGCAGAGATTTTATTCATGTGGGAAATGTATAAGAGATTAGATCATCAAACGGAAAAGAAAAGAGAAATCCTTGAGAAGATTGCGGAGACGGTGAAACATAGGAATCATTTAGATGGTAGCGTGGAATTGATTGGAGTTTTACTGTTTGGTCCAACAAAAGGTTCTTCAGTTCTACAGGCTCTTAGAGAACCTGGTCTACCTCTTGTTGATGATTGGGAATGCTTAAAATCAAGGGTTCGGTTGTTTGAAACTCACTGTGGGTCACTGACACAGTATGGGATGAAACACATGCGAGCATTTGCGAACATTTGCAACAGCGGTGTTTCTGAGGATTCTATGGAGAAGGCATGTATAGCAGCATGTGGTGGGTATAATGTAGAGCTATTACATCCATCAAACAGAGGTTATAGTGCTTAA

Protein sequence

>Msa1329200

MFEGVMPKDLNVYVTTASNAQESSWGTYCPGVEPAPPPEYITCLGDLYSVAWMEDSESHNLKRETVKQQYKSVKERTSNYNNYALGSHVMQYGDTNITDEKLYLYQGFDPATVNLPPHNDKLGSKMEVVNQRDAEILFMWEMYKRLDHQTEKKREILEKIAETVKHRNHLDGSVELIGVLLFGPTKGSSVLQALREPGLPLVDDWECLKSRVRLFETHCGSLTQYGMKHMRAFANICNSGVSEDSMEKACIAACGGYNVELLHPSNRGYSA*