Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0032100 | sp|Q501D1|Y1490_ARATH | 59.070 | 430 | 169 | 4 | 3 | 425 | 143 | 572 | 0.0 | 554 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0012200 | Msa0032100 | 0.818468 | 1.929517e-52 | -8.615850e-47 |
| Msa0028620 | Msa0032100 | 0.841374 | 4.939977e-58 | -8.615850e-47 |
| Msa0032080 | Msa0032100 | 0.940069 | 4.378134e-100 | -8.615850e-47 |
| Msa0032100 | Msa0032470 | 0.816817 | 4.547619e-52 | -8.615850e-47 |
| Msa0032100 | Msa0055640 | 0.804246 | 2.368124e-49 | -8.615850e-47 |
| Msa0032100 | Msa0076290 | 0.822311 | 2.535554e-53 | -8.615850e-47 |
| Msa0032100 | Msa0079070 | 0.826384 | 2.794551e-54 | -8.615850e-47 |
| Msa0032100 | Msa0079370 | 0.896179 | 4.727348e-76 | -8.615850e-47 |
| Msa0032100 | Msa0079390 | 0.926081 | 7.645662e-91 | -8.615850e-47 |
| Msa0032100 | Msa0102140 | 0.809678 | 1.680049e-50 | -8.615850e-47 |
| Msa0032100 | Msa0115790 | 0.849325 | 3.477000e-60 | -8.615850e-47 |
| Msa0032100 | Msa0124320 | 0.852047 | 5.965727e-61 | -8.615850e-47 |
| Msa0032100 | Msa0127800 | 0.812846 | 3.452657e-51 | -8.615850e-47 |
| Msa0032100 | Msa0138020 | 0.829203 | 5.871742e-55 | -8.615850e-47 |
| Msa0032100 | Msa0150230 | 0.825963 | 3.518681e-54 | -8.615850e-47 |
| Msa0032100 | Msa0160960 | 0.802137 | 6.471290e-49 | -8.615850e-47 |
| Msa0032100 | Msa0172060 | 0.820318 | 7.306537e-53 | -8.615850e-47 |
| Msa0032100 | Msa0172080 | 0.883651 | 3.744979e-71 | -8.615850e-47 |
| Msa0032100 | Msa0186950 | 0.821200 | 4.581811e-53 | -8.615850e-47 |
| Msa0032100 | Msa0189030 | 0.840781 | 7.072082e-58 | -8.615850e-47 |
| Msa0032100 | Msa0194080 | 0.801381 | 9.248779e-49 | -8.615850e-47 |
| Msa0032100 | Msa0206010 | 0.805277 | 1.442978e-49 | -8.615850e-47 |
| Msa0032100 | Msa0218370 | 0.854363 | 1.294149e-61 | -8.615850e-47 |
| Msa0032100 | Msa0219590 | 0.819298 | 1.249835e-52 | -8.615850e-47 |
| Msa0032100 | Msa0231240 | 0.803175 | 3.952512e-49 | -8.615850e-47 |
| Msa0032100 | Msa0236420 | 0.831048 | 2.082033e-55 | -8.615850e-47 |
| Msa0032100 | Msa0240270 | 0.807104 | 5.950084e-50 | -8.615850e-47 |
| Msa0032100 | Msa0241140 | 0.805826 | 1.106775e-49 | -8.615850e-47 |
| Msa0032100 | Msa0243480 | 0.851145 | 1.073992e-60 | -8.615850e-47 |
| Msa0032100 | Msa0245860 | 0.804865 | 1.759620e-49 | -8.615850e-47 |
| Msa0032100 | Msa0270960 | 0.829794 | 4.215983e-55 | -8.615850e-47 |
| Msa0032100 | Msa0281930 | 0.834029 | 3.796513e-56 | -8.615850e-47 |
| Msa0032100 | Msa0286670 | 0.822653 | 2.110892e-53 | -8.615850e-47 |
| Msa0032100 | Msa0287870 | 0.848506 | 5.868340e-60 | -8.615850e-47 |
| Msa0032100 | Msa0309270 | 0.840438 | 8.696382e-58 | -8.615850e-47 |
| Msa0032100 | Msa0321080 | 0.813240 | 2.828959e-51 | -8.615850e-47 |
| Msa0032100 | Msa0323370 | 0.803671 | 3.119209e-49 | -8.615850e-47 |
| Msa0032100 | Msa0326110 | 0.811304 | 7.484517e-51 | -8.615850e-47 |
| Msa0032100 | Msa0363790 | 0.839681 | 1.369878e-57 | -8.615850e-47 |
| Msa0032100 | Msa0388730 | 0.815236 | 1.024966e-51 | -8.615850e-47 |
| Msa0032100 | Msa0394470 | 0.806768 | 7.006621e-50 | -8.615850e-47 |
| Msa0032100 | Msa0395750 | 0.826532 | 2.575694e-54 | -8.615850e-47 |
| Msa0032100 | Msa0434540 | 0.841885 | 3.621525e-58 | -8.615850e-47 |
| Msa0032100 | Msa0454360 | 0.811016 | 8.643722e-51 | -8.615850e-47 |
| Msa0032100 | Msa0455760 | 0.804425 | 2.173444e-49 | -8.615850e-47 |
| Msa0032100 | Msa0478370 | 0.804948 | 1.690618e-49 | -8.615850e-47 |
| Msa0032100 | Msa0486690 | 0.823783 | 1.150054e-53 | -8.615850e-47 |
| Msa0032100 | Msa0521270 | 0.811937 | 5.453770e-51 | -8.615850e-47 |
| Msa0032100 | Msa0522500 | 0.815860 | 7.445836e-52 | -8.615850e-47 |
| Msa0032100 | Msa0526070 | -0.803309 | 3.706608e-49 | -8.615850e-47 |
| Msa0032100 | Msa0527540 | 0.803617 | 3.200967e-49 | -8.615850e-47 |
| Msa0032100 | Msa0535630 | 0.806514 | 7.927009e-50 | -8.615850e-47 |
| Msa0032100 | Msa0538670 | 0.834606 | 2.720287e-56 | -8.615850e-47 |
| Msa0032100 | Msa0545050 | 0.808653 | 2.787094e-50 | -8.615850e-47 |
| Msa0032100 | Msa0566350 | 0.815184 | 1.053081e-51 | -8.615850e-47 |
| Msa0032100 | Msa0566750 | 0.815449 | 9.191399e-52 | -8.615850e-47 |
| Msa0032100 | Msa0581010 | 0.811532 | 6.678191e-51 | -8.615850e-47 |
| Msa0032100 | Msa0594560 | 0.814796 | 1.283320e-51 | -8.615850e-47 |
| Msa0032100 | Msa0600590 | 0.803821 | 2.903197e-49 | -8.615850e-47 |
| Msa0032100 | Msa0604290 | 0.812621 | 3.867374e-51 | -8.615850e-47 |
| Msa0032100 | Msa0613340 | 0.818636 | 1.767925e-52 | -8.615850e-47 |
| Msa0032100 | Msa0622170 | -0.802149 | 6.432645e-49 | -8.615850e-47 |
| Msa0032100 | Msa0623070 | 0.828250 | 9.977534e-55 | -8.615850e-47 |
| Msa0032100 | Msa0624060 | 0.814107 | 1.823438e-51 | -8.615850e-47 |
| Msa0032100 | Msa0641130 | 0.816239 | 6.126848e-52 | -8.615850e-47 |
| Msa0032100 | Msa0654310 | 0.833922 | 4.037657e-56 | -8.615850e-47 |
| Msa0032100 | Msa0657930 | -0.809530 | 1.808214e-50 | -8.615850e-47 |
| Msa0032100 | Msa0672760 | 0.854892 | 9.094853e-62 | -8.615850e-47 |
| Msa0032100 | Msa0676130 | 0.814818 | 1.269132e-51 | -8.615850e-47 |
| Msa0032100 | Msa0676180 | 0.819709 | 1.007391e-52 | -8.615850e-47 |
| Msa0032100 | Msa0685090 | 0.807903 | 4.027242e-50 | -8.615850e-47 |
| Msa0032100 | Msa0711150 | 0.805356 | 1.388987e-49 | -8.615850e-47 |
| Msa0032100 | Msa0765440 | 0.807724 | 4.395680e-50 | -8.615850e-47 |
| Msa0032100 | Msa0796250 | 0.824736 | 6.865382e-54 | -8.615850e-47 |
| Msa0032100 | Msa0830230 | 0.804487 | 2.110324e-49 | -8.615850e-47 |
| Msa0032100 | Msa0844110 | 0.805969 | 1.032470e-49 | -8.615850e-47 |
| Msa0032100 | Msa0878220 | 0.825320 | 4.997930e-54 | -8.615850e-47 |
| Msa0032100 | Msa0888260 | 0.811208 | 7.852030e-51 | -8.615850e-47 |
| Msa0032100 | Msa0894710 | 0.822914 | 1.835134e-53 | -8.615850e-47 |
| Msa0032100 | Msa0899970 | 0.814363 | 1.600391e-51 | -8.615850e-47 |
| Msa0032100 | Msa0921420 | 0.814110 | 1.820233e-51 | -8.615850e-47 |
| Msa0032100 | Msa0946280 | -0.800268 | 1.560951e-48 | -8.615850e-47 |
| Msa0032100 | Msa0958920 | 0.804458 | 2.139552e-49 | -8.615850e-47 |
| Msa0032100 | Msa0960390 | 0.819125 | 1.368961e-52 | -8.615850e-47 |
| Msa0032100 | Msa0965080 | 0.823817 | 1.129146e-53 | -8.615850e-47 |
| Msa0032100 | Msa0965290 | 0.828670 | 7.902708e-55 | -8.615850e-47 |
| Msa0032100 | Msa0994910 | 0.806817 | 6.840404e-50 | -8.615850e-47 |
| Msa0032100 | Msa0999680 | 0.828963 | 6.712105e-55 | -8.615850e-47 |
| Msa0032100 | Msa1036300 | 0.814546 | 1.457991e-51 | -8.615850e-47 |
| Msa0032100 | Msa1039710 | -0.803631 | 3.179852e-49 | -8.615850e-47 |
| Msa0032100 | Msa1048070 | -0.824759 | 6.781420e-54 | -8.615850e-47 |
| Msa0032100 | Msa1058750 | 0.801277 | 9.716007e-49 | -8.615850e-47 |
| Msa0032100 | Msa1077130 | 0.800619 | 1.323747e-48 | -8.615850e-47 |
| Msa0032100 | Msa1080330 | -0.802910 | 4.482915e-49 | -8.615850e-47 |
| Msa0032100 | Msa1107260 | 0.818573 | 1.826898e-52 | -8.615850e-47 |
| Msa0032100 | Msa1114410 | 0.800500 | 1.400218e-48 | -8.615850e-47 |
| Msa0032100 | Msa1122150 | 0.828765 | 7.492553e-55 | -8.615850e-47 |
| Msa0032100 | Msa1156150 | -0.803338 | 3.655757e-49 | -8.615850e-47 |
| Msa0032100 | Msa1160560 | 0.866027 | 3.849888e-65 | -8.615850e-47 |
| Msa0032100 | Msa1177560 | 0.803964 | 2.710516e-49 | -8.615850e-47 |
| Msa0032100 | Msa1186360 | 0.806146 | 9.476313e-50 | -8.615850e-47 |
| Msa0032100 | Msa1212050 | 0.819887 | 9.171680e-53 | -8.615850e-47 |
| Msa0032100 | Msa1236440 | 0.809161 | 2.169738e-50 | -8.615850e-47 |
| Msa0032100 | Msa1239620 | 0.803865 | 2.842247e-49 | -8.615850e-47 |
| Msa0032100 | Msa1246360 | 0.810122 | 1.348690e-50 | -8.615850e-47 |
| Msa0032100 | Msa1257750 | 0.802653 | 5.064589e-49 | -8.615850e-47 |
| Msa0032100 | Msa1264620 | 0.814036 | 1.889963e-51 | -8.615850e-47 |
| Msa0032100 | Msa1271130 | 0.808220 | 3.446991e-50 | -8.615850e-47 |
| Msa0032100 | Msa1277670 | 0.805366 | 1.382054e-49 | -8.615850e-47 |
| Msa0032100 | Msa1282440 | 0.808259 | 3.381579e-50 | -8.615850e-47 |
| Msa0032100 | Msa1291450 | 0.804762 | 1.848941e-49 | -8.615850e-47 |
| Msa0032100 | Msa1304890 | -0.802923 | 4.456134e-49 | -8.615850e-47 |
| Msa0032100 | Msa1305810 | 0.818442 | 1.956332e-52 | -8.615850e-47 |
| Msa0032100 | Msa1308870 | 0.813942 | 1.982829e-51 | -8.615850e-47 |
| Msa0032100 | Msa1316440 | 0.801267 | 9.762254e-49 | -8.615850e-47 |
| Msa0032100 | Msa1329200 | 0.835444 | 1.672136e-56 | -8.615850e-47 |
| Msa0032100 | Msa1331320 | 0.806409 | 8.342985e-50 | -8.615850e-47 |
| Msa0032100 | Msa1335230 | 0.801076 | 1.068014e-48 | -8.615850e-47 |
| Msa0032100 | Msa1338400 | 0.803795 | 2.938735e-49 | -8.615850e-47 |
| Msa0032100 | Msa1355180 | 0.858385 | 8.540879e-63 | -8.615850e-47 |
| Msa0032100 | Msa1369920 | -0.817898 | 2.597357e-52 | -8.615850e-47 |
| Msa0032100 | Msa1378410 | 0.814769 | 1.301345e-51 | -8.615850e-47 |
| Msa0032100 | Msa1390020 | 0.846169 | 2.571852e-59 | -8.615850e-47 |
| Msa0032100 | Msa1401990 | 0.803797 | 2.936966e-49 | -8.615850e-47 |
| Msa0032100 | Msa1406490 | 0.817192 | 3.745246e-52 | -8.615850e-47 |
| Msa0032100 | Msa1419840 | 0.851311 | 9.639508e-61 | -8.615850e-47 |
| Msa0032100 | Msa1437730 | 0.813458 | 2.533705e-51 | -8.615850e-47 |
| Msa0032100 | Msa1442920 | 0.843182 | 1.639323e-58 | -8.615850e-47 |
| Msa0032100 | Msa1452710 | 0.808463 | 3.059191e-50 | -8.615850e-47 |
| Msa0032100 | Msa1458680 | 0.844713 | 6.376273e-59 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0032100 | MtrunA17_Chr1g0190341 | 98.824 | 425 | 5 | 0 | 1 | 425 | 136 | 560 | 0.0 | 873 |
| Msa0032100 | MtrunA17_Chr1g0190371 | 98.824 | 425 | 5 | 0 | 1 | 425 | 136 | 560 | 0.0 | 873 |
| Msa0032100 | MtrunA17_Chr5g0395701 | 62.085 | 422 | 156 | 3 | 5 | 423 | 185 | 605 | 0.0 | 566 |
| Msa0032100 | MtrunA17_Chr4g0039581 | 59.905 | 419 | 164 | 3 | 7 | 423 | 151 | 567 | 0.0 | 550 |
| Msa0032100 | MtrunA17_Chr2g0309191 | 50.824 | 425 | 192 | 8 | 3 | 423 | 141 | 552 | 3.62e-147 | 429 |
| Msa0032100 | MtrunA17_Chr2g0309181 | 49.061 | 426 | 203 | 7 | 3 | 423 | 169 | 585 | 5.38e-142 | 417 |
| Msa0032100 | MtrunA17_Chr2g0309171 | 49.074 | 432 | 202 | 7 | 1 | 423 | 729 | 1151 | 2.94e-137 | 421 |
| Msa0032100 | MtrunA17_Chr2g0309171 | 48.592 | 426 | 201 | 7 | 3 | 419 | 113 | 529 | 5.43e-129 | 399 |
| Msa0032100 | MtrunA17_Chr2g0310081 | 47.059 | 425 | 207 | 7 | 4 | 423 | 167 | 578 | 1.67e-136 | 403 |
| Msa0032100 | MtrunA17_Chr4g0074491 | 48.009 | 427 | 202 | 8 | 8 | 423 | 129 | 546 | 1.13e-134 | 397 |
| Msa0032100 | MtrunA17_Chr2g0309131 | 45.952 | 420 | 181 | 6 | 9 | 423 | 107 | 485 | 2.12e-124 | 369 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0032100 | AT3G04350.2 | 68.941 | 425 | 124 | 3 | 9 | 425 | 121 | 545 | 0.0 | 634 |
| Msa0032100 | AT3G04350.1 | 68.941 | 425 | 124 | 3 | 9 | 425 | 143 | 567 | 0.0 | 633 |
| Msa0032100 | AT5G18490.1 | 65.574 | 427 | 136 | 4 | 3 | 425 | 134 | 553 | 0.0 | 600 |
| Msa0032100 | AT1G04090.1 | 59.070 | 430 | 169 | 4 | 3 | 425 | 143 | 572 | 0.0 | 554 |
| Msa0032100 | AT5G43950.1 | 58.629 | 423 | 166 | 6 | 9 | 423 | 143 | 564 | 0.0 | 523 |
| Msa0032100 | AT2G44260.1 | 47.281 | 423 | 211 | 6 | 4 | 423 | 139 | 552 | 5.32e-141 | 414 |
| Msa0032100 | AT2G44260.2 | 47.281 | 423 | 211 | 6 | 4 | 423 | 169 | 582 | 9.44e-141 | 414 |
| Msa0032100 | AT2G44230.1 | 47.529 | 425 | 200 | 9 | 6 | 423 | 133 | 541 | 1.47e-135 | 400 |
| Msa0032100 | AT3G01880.1 | 45.843 | 421 | 212 | 8 | 8 | 423 | 180 | 589 | 3.88e-122 | 367 |
| Msa0032100 | AT3G01870.1 | 44.471 | 425 | 220 | 8 | 3 | 423 | 171 | 583 | 5.68e-120 | 361 |
Find 191 sgRNAs with CRISPR-Local
Find 227 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGTTCATCAATGACACTTTA+AGG | 0.107306 | 1_1:-59017985 | None:intergenic |
| ACTGCGTGAATGCGTAAATT+TGG | 0.163385 | 1_1:-59018696 | None:intergenic |
| ACACTGAAAACAAAAGAATT+TGG | 0.203333 | 1_1:-59018896 | None:intergenic |
| GTAGTTACTTATAGCTTTCT+TGG | 0.219890 | 1_1:+59019004 | Msa0032100:three_prime_UTR |
| TAAACAAGTTTGAGAAAGTT+TGG | 0.235719 | 1_1:+59017036 | Msa0032100:five_prime_UTR |
| CTGAGCACAGTGGAGGTAAA+TGG | 0.247800 | 1_1:+59018104 | Msa0032100:CDS |
| TTATTTCCAACAGAGCTTTC+TGG | 0.254169 | 1_1:+59018478 | Msa0032100:CDS |
| CACTTAATTACTCATTAATA+TGG | 0.264581 | 1_1:+59017258 | Msa0032100:five_prime_UTR |
| GGATCAGCGTCAAAGAATTC+TGG | 0.283321 | 1_1:-59016482 | None:intergenic |
| ACAAAAGAATTTGGATTGTC+TGG | 0.303145 | 1_1:-59018887 | None:intergenic |
| AGCCAATTGTCCTTCTCCTT+TGG | 0.307063 | 1_1:-59018520 | None:intergenic |
| CGTATTGCTTGTAATGGAAT+AGG | 0.307831 | 1_1:+59019184 | Msa0032100:three_prime_UTR |
| GCGAACTCCTATTCCAAGTT+TGG | 0.314359 | 1_1:-59018236 | None:intergenic |
| TCCTTTACCATAAGAATGAT+TGG | 0.315404 | 1_1:-59018612 | None:intergenic |
| TGTCTTGATGAATAAACTAT+TGG | 0.322222 | 1_1:-59018166 | None:intergenic |
| TCTGAAAACATACCATTATT+AGG | 0.322734 | 1_1:-59018655 | None:intergenic |
| ACAGAAAACCTAACAAATAT+TGG | 0.329471 | 1_1:-59018439 | None:intergenic |
| GATATAATGATGGTGCGTTT+TGG | 0.329648 | 1_1:+59017810 | Msa0032100:CDS |
| CATCGAACTTCTTCAACTTT+CGG | 0.340671 | 1_1:-59017380 | None:intergenic |
| TCTTCAACTTTCGGTTCATC+TGG | 0.342527 | 1_1:-59017371 | None:intergenic |
| ATGGGTTAATGCATTCGATT+TGG | 0.345620 | 1_1:+59018123 | Msa0032100:CDS |
| TCTCTCTTCTTTCTAATAAG+AGG | 0.345722 | 1_1:+59016403 | Msa0032100:five_prime_UTR |
| ATTCGATTTGGAGTTTATTC+AGG | 0.347982 | 1_1:+59018135 | Msa0032100:CDS |
| ATGATGAATGTGTTTACTTT+TGG | 0.348745 | 1_1:+59017294 | Msa0032100:CDS |
| TCCTTCTCCTTTGGACCAGT+TGG | 0.349557 | 1_1:-59018511 | None:intergenic |
| GACGGACCAGATATCAAGTT+TGG | 0.351841 | 1_1:-59018802 | None:intergenic |
| ACATGCTTCCAATATTTGTT+AGG | 0.353415 | 1_1:+59018431 | Msa0032100:CDS |
| CATGCTCTTATTGAGCATTA+CGG | 0.358178 | 1_1:+59017644 | Msa0032100:CDS |
| AATGACACTTTAAGGGTTGC+AGG | 0.360391 | 1_1:-59017977 | None:intergenic |
| TTCATTCGTATTGCTTGTAA+TGG | 0.364694 | 1_1:+59019178 | Msa0032100:three_prime_UTR |
| TCATCTTTCTGTCCTAATAA+TGG | 0.365027 | 1_1:+59018643 | Msa0032100:three_prime_UTR |
| GCTGGATCCAATCATTCTTA+TGG | 0.369974 | 1_1:+59018605 | Msa0032100:three_prime_UTR |
| ATGCTCTTATTGAGCATTAC+GGG | 0.370883 | 1_1:+59017645 | Msa0032100:CDS |
| TAAGAGGTTGCTTTGTGGTT+TGG | 0.377108 | 1_1:+59016419 | Msa0032100:five_prime_UTR |
| GTTCATCAATGACACTTTAA+GGG | 0.377575 | 1_1:-59017984 | None:intergenic |
| TCTGGTGAGGAGGGGCCAAC+TGG | 0.379305 | 1_1:+59018496 | Msa0032100:CDS |
| AAAATTCCAAACTTGATATC+TGG | 0.383640 | 1_1:+59018796 | Msa0032100:three_prime_UTR |
| AACTTTCGGTTCATCTGGAT+TGG | 0.384698 | 1_1:-59017366 | None:intergenic |
| TTACTCATTAATATGGTGTA+TGG | 0.386638 | 1_1:+59017265 | Msa0032100:exon |
| CTGTTGGAAATAATTCAAAA+AGG | 0.390774 | 1_1:-59018468 | None:intergenic |
| CTGCGTGAATGCGTAAATTT+GGG | 0.393049 | 1_1:-59018695 | None:intergenic |
| GTGGTTTGGTAAGGGATGTT+TGG | 0.395720 | 1_1:+59016433 | Msa0032100:five_prime_UTR |
| AGAGGTGAAGGAAGAGAAAA+GGG | 0.395917 | 1_1:-59016509 | None:intergenic |
| AAGAGGTGAAGGAAGAGAAA+AGG | 0.400057 | 1_1:-59016510 | None:intergenic |
| GTTTGGTTGCGAGTGTTTGT+TGG | 0.404820 | 1_1:+59016450 | Msa0032100:five_prime_UTR |
| TAAGATAATATTATTGCTAA+AGG | 0.408489 | 1_1:+59019134 | Msa0032100:three_prime_UTR |
| TCATGCAGGGACTTACCTTC+AGG | 0.415789 | 1_1:+59018207 | Msa0032100:CDS |
| CATATTAATGAGTAATTAAG+TGG | 0.423515 | 1_1:-59017257 | None:intergenic |
| AGGGTTGCAGGTCCATTGAA+TGG | 0.426014 | 1_1:-59017965 | None:intergenic |
| TCCTCGCAACGGCTGATCAT+TGG | 0.426252 | 1_1:-59017156 | None:intergenic |
| GTTCATGTAAAACCAGCATT+AGG | 0.426763 | 1_1:+59017905 | Msa0032100:CDS |
| GCTCAATAAGAGCATGAATC+TGG | 0.427486 | 1_1:-59017637 | None:intergenic |
| ATTGTTGCTGCCGGGTATCT+TGG | 0.427869 | 1_1:+59018310 | Msa0032100:CDS |
| CCGACGGCTTTATAACCCTT+TGG | 0.428360 | 1_1:-59017329 | None:intergenic |
| GTATCAACTGTATGTATAGA+AGG | 0.431668 | 1_1:+59018957 | Msa0032100:three_prime_UTR |
| GGTTGCTTTGTGGTTTGGTA+AGG | 0.431847 | 1_1:+59016424 | Msa0032100:five_prime_UTR |
| CTTCAGGGATCATCCAAACT+TGG | 0.432488 | 1_1:+59018223 | Msa0032100:CDS |
| CGGTGAACATGTCGGTGATT+GGG | 0.432674 | 1_1:+59018024 | Msa0032100:CDS |
| TCCAATCATTCTTATGGTAA+AGG | 0.432784 | 1_1:+59018611 | Msa0032100:three_prime_UTR |
| TCGGTGAACATGTCGGTGAT+TGG | 0.434338 | 1_1:+59018023 | Msa0032100:CDS |
| GATACATGGCGACGATATCT+TGG | 0.440980 | 1_1:-59018939 | None:intergenic |
| GCAACTTCACCGGAGAGCTT+TGG | 0.443367 | 1_1:+59018068 | Msa0032100:CDS |
| TCTAATAAGAGGTTGCTTTG+TGG | 0.443374 | 1_1:+59016414 | Msa0032100:five_prime_UTR |
| ATATTATTGCTAAAGGTTGA+TGG | 0.447274 | 1_1:+59019141 | Msa0032100:three_prime_UTR |
| TTATAACCCTTTGGAGGGTT+AGG | 0.448233 | 1_1:-59017320 | None:intergenic |
| GGATCATCCAAACTTGGAAT+AGG | 0.450282 | 1_1:+59018229 | Msa0032100:CDS |
| TTTGGTTGCGAGTGTTTGTT+GGG | 0.453621 | 1_1:+59016451 | Msa0032100:five_prime_UTR |
| GATGGCATGTATTTCTCATC+AGG | 0.457793 | 1_1:-59017686 | None:intergenic |
| CCCAAGGGATATTCTTCCAC+CGG | 0.460403 | 1_1:-59016994 | None:intergenic |
| TCCTCACCAGAAAGCTCTGT+TGG | 0.461764 | 1_1:-59018484 | None:intergenic |
| TGTATGTATAGAAGGTGTAT+AGG | 0.462422 | 1_1:+59018965 | Msa0032100:three_prime_UTR |
| AGAACATGTATATACATTTG+TGG | 0.465667 | 1_1:+59019103 | Msa0032100:three_prime_UTR |
| TATTATTGCTAAAGGTTGAT+GGG | 0.466225 | 1_1:+59019142 | Msa0032100:three_prime_UTR |
| GCATGAATCTGGTTGAGATT+CGG | 0.468325 | 1_1:-59017626 | None:intergenic |
| AATACACAACCTTGCGATAG+AGG | 0.468770 | 1_1:+59017488 | Msa0032100:CDS |
| CCAAGACAGGAAAATCCATC+TGG | 0.469039 | 1_1:-59017119 | None:intergenic |
| GAGGACACGTTCTTGTCGCT+CGG | 0.471944 | 1_1:+59017174 | Msa0032100:five_prime_UTR |
| TGGATCCAGCTCATGAGAAA+TGG | 0.475127 | 1_1:-59018592 | None:intergenic |
| TGAGCACAGTGGAGGTAAAT+GGG | 0.475593 | 1_1:+59018105 | Msa0032100:CDS |
| CTTTACTGATATTGCAATGT+GGG | 0.475927 | 1_1:+59017934 | Msa0032100:CDS |
| GAAGGAAGAGAAAAGGGAAG+TGG | 0.478043 | 1_1:-59016503 | None:intergenic |
| TGCGAGAAATAATCTTAAGA+AGG | 0.480833 | 1_1:+59017856 | Msa0032100:CDS |
| GCAGGCACGTCAGTGGTCAT+TGG | 0.482146 | 1_1:+59018721 | Msa0032100:three_prime_UTR |
| ACGGCTTTATAACCCTTTGG+AGG | 0.486012 | 1_1:-59017326 | None:intergenic |
| TTTCGGTTCATCTGGATTGG+TGG | 0.487936 | 1_1:-59017363 | None:intergenic |
| GTCCAAAGGAGAAGGACAAT+TGG | 0.490950 | 1_1:+59018518 | Msa0032100:CDS |
| GATCAGCGTCAAAGAATTCT+GGG | 0.494149 | 1_1:-59016481 | None:intergenic |
| TGTAGATCCGATGTTTAAGT+TGG | 0.494899 | 1_1:+59019047 | Msa0032100:three_prime_UTR |
| ACTAGCCATTTCTCATGAGC+TGG | 0.497310 | 1_1:+59018587 | Msa0032100:three_prime_UTR |
| GGGTTGCAGGTCCATTGAAT+GGG | 0.500640 | 1_1:-59017964 | None:intergenic |
| GCCGGTGGAAGAATATCCCT+TGG | 0.503378 | 1_1:+59016993 | Msa0032100:five_prime_UTR |
| CTACTTTGATTCTGAACAAG+TGG | 0.505519 | 1_1:+59017556 | Msa0032100:CDS |
| GAGAAATGGCTAGTAGCATA+TGG | 0.508226 | 1_1:-59018578 | None:intergenic |
| CTCGCAAACTTCTGTTAGAT+CGG | 0.508339 | 1_1:-59017411 | None:intergenic |
| CGGTGAAGTTGCTCACGCGA+AGG | 0.508371 | 1_1:-59018057 | None:intergenic |
| CATGCTAGCTATCCTCATGC+AGG | 0.510869 | 1_1:+59018193 | Msa0032100:CDS |
| TACGCATTCACGCAGTCGGC+AGG | 0.512700 | 1_1:+59018703 | Msa0032100:three_prime_UTR |
| CCTTGTGGCCATTGTGGAAG+AGG | 0.512962 | 1_1:-59016527 | None:intergenic |
| CCACATTGCAATATCAGTAA+AGG | 0.513990 | 1_1:-59017933 | None:intergenic |
| CTAGCTAGAGGTGTATCTGT+TGG | 0.516741 | 1_1:+59017515 | Msa0032100:CDS |
| GGTGGCCGTTGGATCTAGAT+TGG | 0.518329 | 1_1:-59018824 | None:intergenic |
| TTGGTTGCCTAACCCTCCAA+AGG | 0.523651 | 1_1:+59017313 | Msa0032100:CDS |
| GTTGCTTTGTGGTTTGGTAA+GGG | 0.528648 | 1_1:+59016425 | Msa0032100:five_prime_UTR |
| GATACAAGATTGTTGCTGCC+GGG | 0.529740 | 1_1:+59018302 | Msa0032100:CDS |
| CATGCAGGGACTTACCTTCA+GGG | 0.530671 | 1_1:+59018208 | Msa0032100:CDS |
| AACAGAGCTTTCTGGTGAGG+AGG | 0.540070 | 1_1:+59018486 | Msa0032100:CDS |
| GTATACTGCGGGTAATGCAA+AGG | 0.543009 | 1_1:+59017745 | Msa0032100:CDS |
| ACAGAGCTTTCTGGTGAGGA+GGG | 0.543440 | 1_1:+59018487 | Msa0032100:CDS |
| GTAAAGGCTCCTCCTAATGC+TGG | 0.544725 | 1_1:-59017917 | None:intergenic |
| AGAATACCTTGTGGCCATTG+TGG | 0.547018 | 1_1:-59016533 | None:intergenic |
| CTATACATACAGTTGATACA+TGG | 0.547754 | 1_1:-59018953 | None:intergenic |
| AAGAGCTGGGGATTCTGACT+CGG | 0.549133 | 1_1:-59017228 | None:intergenic |
| AGGACACGTTCTTGTCGCTC+GGG | 0.549143 | 1_1:+59017175 | Msa0032100:five_prime_UTR |
| CCGGTGGAAGAATATCCCTT+GGG | 0.549609 | 1_1:+59016994 | Msa0032100:five_prime_UTR |
| AATTCTAACGGAAAGGCACT+AGG | 0.549895 | 1_1:+59017068 | Msa0032100:five_prime_UTR |
| ATCAGCACATCGGTGGCCGT+TGG | 0.551235 | 1_1:-59018835 | None:intergenic |
| AGACCTTTGGAGATTCCAGA+TGG | 0.551683 | 1_1:+59017104 | Msa0032100:five_prime_UTR |
| TTCCTTCACCTCTTCCACAA+TGG | 0.552183 | 1_1:+59016519 | Msa0032100:five_prime_UTR |
| AGATACAAGATTGTTGCTGC+CGG | 0.552734 | 1_1:+59018301 | Msa0032100:CDS |
| CGGCTTTATAACCCTTTGGA+GGG | 0.557691 | 1_1:-59017325 | None:intergenic |
| GACTCCATCACCAAGATACC+CGG | 0.558460 | 1_1:-59018320 | None:intergenic |
| GGTGAAGTTGCTCACGCGAA+GGG | 0.560176 | 1_1:-59018056 | None:intergenic |
| ATTATTTCTCGCATCTTCAT+CGG | 0.561997 | 1_1:-59017846 | None:intergenic |
| GCCGTTGGATCTAGATTGGA+CGG | 0.562927 | 1_1:-59018820 | None:intergenic |
| CGTGAATCATATACAATGGT+AGG | 0.564534 | 1_1:-59018385 | None:intergenic |
| TCCAACAGAGCTTTCTGGTG+AGG | 0.565118 | 1_1:+59018483 | Msa0032100:CDS |
| GCGAGAAATAATCTTAAGAA+GGG | 0.567421 | 1_1:+59017857 | Msa0032100:CDS |
| GACTCGGAACAATCAGCTTG+AGG | 0.567833 | 1_1:-59017212 | None:intergenic |
| TTTCTCGCATCTTCATCGGT+AGG | 0.570074 | 1_1:-59017842 | None:intergenic |
| AATTTACGCATTCACGCAGT+CGG | 0.570803 | 1_1:+59018699 | Msa0032100:three_prime_UTR |
| TATACTGCGGGTAATGCAAA+GGG | 0.571900 | 1_1:+59017746 | Msa0032100:CDS |
| CATGTAAAACCAGCATTAGG+AGG | 0.572269 | 1_1:+59017908 | Msa0032100:CDS |
| AACATTGAGATGAACAAGAT+CGG | 0.572272 | 1_1:+59018004 | Msa0032100:CDS |
| TGGAGATGCACAAATTCTAA+CGG | 0.580046 | 1_1:+59017056 | Msa0032100:five_prime_UTR |
| TGGTTGCCTAACCCTCCAAA+GGG | 0.582899 | 1_1:+59017314 | Msa0032100:CDS |
| CTTCGCGTGAGCAACTTCAC+CGG | 0.582952 | 1_1:+59018058 | Msa0032100:CDS |
| TCCAATGATCAGCCGTTGCG+AGG | 0.585934 | 1_1:+59017155 | Msa0032100:five_prime_UTR |
| GCCAACTGGTCCAAAGGAGA+AGG | 0.588714 | 1_1:+59018510 | Msa0032100:CDS |
| GAATAGGAATGTGCTTGGTT+CGG | 0.588806 | 1_1:+59019200 | Msa0032100:three_prime_UTR |
| GTGGCAGTAGTAACCAAGAC+AGG | 0.592567 | 1_1:-59017132 | None:intergenic |
| AAGGTTGTGTATTCCAAACC+TGG | 0.594362 | 1_1:-59017478 | None:intergenic |
| AATCCATCTGGAATCTCCAA+AGG | 0.594832 | 1_1:-59017107 | None:intergenic |
| GGTGTATAGGAGGTGTGCCT+CGG | 0.595411 | 1_1:+59018978 | Msa0032100:three_prime_UTR |
| ACATGCCATCATCGGTGTCG+TGG | 0.595421 | 1_1:+59017699 | Msa0032100:CDS |
| TCCGTCCAATCTAGATCCAA+CGG | 0.595498 | 1_1:+59018819 | Msa0032100:three_prime_UTR |
| TATTGAGCATTACGGGCCAA+CGG | 0.595833 | 1_1:+59017652 | Msa0032100:CDS |
| CTGATGATAGTGTGAATGTG+TGG | 0.596339 | 1_1:+59018853 | Msa0032100:three_prime_UTR |
| TCTGTTGGAACATTCTTCTG+TGG | 0.597430 | 1_1:+59017530 | Msa0032100:CDS |
| CTCATATATTGCAACCAACA+TGG | 0.598495 | 1_1:-59018352 | None:intergenic |
| CCTCTTCCACAATGGCCACA+AGG | 0.602749 | 1_1:+59016527 | Msa0032100:five_prime_UTR |
| GGCACAAATTTACCTGGTGG+AGG | 0.603301 | 1_1:+59017788 | Msa0032100:CDS |
| GGTTGCAATATATGAGAGAG+TGG | 0.604682 | 1_1:+59018359 | Msa0032100:CDS |
| GCTGCCGGGTATCTTGGTGA+TGG | 0.606924 | 1_1:+59018316 | Msa0032100:CDS |
| TGAGAAATACATGCCATCAT+CGG | 0.607689 | 1_1:+59017691 | Msa0032100:CDS |
| ATGTATAGAAGGTGTATAGG+AGG | 0.609592 | 1_1:+59018968 | Msa0032100:three_prime_UTR |
| TAATGGAATAGGAATGTGCT+TGG | 0.609971 | 1_1:+59019195 | Msa0032100:three_prime_UTR |
| TATCACGGCACAAATTTACC+TGG | 0.610377 | 1_1:+59017782 | Msa0032100:CDS |
| AAGGAGAAGGACAATTGGCT+AGG | 0.611868 | 1_1:+59018523 | Msa0032100:CDS |
| TAGTTTATTCATCAAGACAT+GGG | 0.614112 | 1_1:+59018170 | Msa0032100:CDS |
| CCAAAGGGTTATAAAGCCGT+CGG | 0.615266 | 1_1:+59017329 | Msa0032100:CDS |
| GGAGGGGCCAACTGGTCCAA+AGG | 0.615580 | 1_1:+59018504 | Msa0032100:CDS |
| CCTGGTGGAGGATATAATGA+TGG | 0.615594 | 1_1:+59017800 | Msa0032100:CDS |
| TCAGGATGAAAATATACCGT+TGG | 0.617396 | 1_1:-59017668 | None:intergenic |
| GGTGGTAACTACTATGCCGA+CGG | 0.618472 | 1_1:-59017345 | None:intergenic |
| CAAGTTTGGATGATCCCTGA+AGG | 0.618933 | 1_1:-59018222 | None:intergenic |
| GGTAAAGCTATAGATTATCA+CGG | 0.619614 | 1_1:+59017767 | Msa0032100:CDS |
| ATGCACAAATTCTAACGGAA+AGG | 0.619830 | 1_1:+59017061 | Msa0032100:five_prime_UTR |
| CCTTTACTGATATTGCAATG+TGG | 0.624376 | 1_1:+59017933 | Msa0032100:CDS |
| CACGGCACAAATTTACCTGG+TGG | 0.625316 | 1_1:+59017785 | Msa0032100:CDS |
| CCATCATTATATCCTCCACC+AGG | 0.627153 | 1_1:-59017800 | None:intergenic |
| GTTGCAATATATGAGAGAGT+GGG | 0.627285 | 1_1:+59018360 | Msa0032100:CDS |
| CACTATCATCAGCACATCGG+TGG | 0.627838 | 1_1:-59018842 | None:intergenic |
| GGCCATTGTGGAAGAGGTGA+AGG | 0.627997 | 1_1:-59016521 | None:intergenic |
| GAAGGGAAACATAGAGAGTG+CGG | 0.636222 | 1_1:+59017874 | Msa0032100:CDS |
| TGAAGGTAAGTCCCTGCATG+AGG | 0.636865 | 1_1:-59018205 | None:intergenic |
| ATAGTTTATTCATCAAGACA+TGG | 0.637290 | 1_1:+59018169 | Msa0032100:CDS |
| ACAAGAACGTGTCCTCGCAA+CGG | 0.637737 | 1_1:-59017167 | None:intergenic |
| TGATGATAGTGTGAATGTGT+GGG | 0.650642 | 1_1:+59018854 | Msa0032100:three_prime_UTR |
| AACAAGATCGGTGAACATGT+CGG | 0.653405 | 1_1:+59018016 | Msa0032100:CDS |
| CACTTGTTCAGAATCAAAGT+AGG | 0.653816 | 1_1:-59017555 | None:intergenic |
| AGAACGTGAATCATATACAA+TGG | 0.654517 | 1_1:-59018389 | None:intergenic |
| GCTAGCATACCTCTATCGCA+AGG | 0.655324 | 1_1:-59017497 | None:intergenic |
| ATGCTAGCTATCCTCATGCA+GGG | 0.655682 | 1_1:+59018194 | Msa0032100:CDS |
| CAGAGCTTTCTGGTGAGGAG+GGG | 0.657357 | 1_1:+59018488 | Msa0032100:CDS |
| GCAACGGCTGATCATTGGAG+TGG | 0.664542 | 1_1:-59017151 | None:intergenic |
| GAGTCATTACAGAACCATGT+TGG | 0.666649 | 1_1:+59018338 | Msa0032100:CDS |
| CTATAAGTAACTACTATCCG+AGG | 0.669559 | 1_1:-59018995 | None:intergenic |
| TTGCAATATATGAGAGAGTG+GGG | 0.676061 | 1_1:+59018361 | Msa0032100:CDS |
| GATAGAGGTATGCTAGCTAG+AGG | 0.685865 | 1_1:+59017503 | Msa0032100:CDS |
| GCAGTCGGCAGGCACGTCAG+TGG | 0.703576 | 1_1:+59018714 | Msa0032100:three_prime_UTR |
| TCACACTATCATCAGCACAT+CGG | 0.710871 | 1_1:-59018845 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATTACTAAGCTTAAAAATTA+AGG | - | chr1_1:59016745-59016764 | None:intergenic | 15.0% |
| !!! | AATACTATTTGATTTCTTTT+TGG | + | chr1_1:59016872-59016891 | Msa0032100:intron | 15.0% |
| !! | TAAGATAATATTATTGCTAA+AGG | + | chr1_1:59019134-59019153 | Msa0032100:three_prime_UTR | 15.0% |
| !!! | GATCTTATTGTCATTAATTT+TGG | + | chr1_1:59016687-59016706 | Msa0032100:intron | 20.0% |
| !!! | TAGTATTTTTTGCAGATATT+GGG | + | chr1_1:59016716-59016735 | Msa0032100:intron | 20.0% |
| !!! | TTTGATTTCTTTTTGGTTAT+TGG | + | chr1_1:59016879-59016898 | Msa0032100:intron | 20.0% |
| !! | CATATTAATGAGTAATTAAG+TGG | - | chr1_1:59017260-59017279 | None:intergenic | 20.0% |
| !! | CACTTAATTACTCATTAATA+TGG | + | chr1_1:59017258-59017277 | Msa0032100:five_prime_UTR | 20.0% |
| !!! | TGCTAAAAGTAATTTTATTC+TGG | + | chr1_1:59018267-59018286 | Msa0032100:CDS | 20.0% |
| !!! | TTTTTAACCAACTTAAACAT+CGG | - | chr1_1:59019057-59019076 | None:intergenic | 20.0% |
| ! | AAGAAAAAAAGAATACCTTG+TGG | - | chr1_1:59016545-59016564 | None:intergenic | 25.0% |
| !!! | GTAGTATTTTTTGCAGATAT+TGG | + | chr1_1:59016715-59016734 | Msa0032100:intron | 25.0% |
| !!! | CTTTATTTCATATTTTGCTG+TGG | + | chr1_1:59016797-59016816 | Msa0032100:intron | 25.0% |
| ! | TAAACAAGTTTGAGAAAGTT+TGG | + | chr1_1:59017036-59017055 | Msa0032100:five_prime_UTR | 25.0% |
| ! | TTACTCATTAATATGGTGTA+TGG | + | chr1_1:59017265-59017284 | Msa0032100:exon | 25.0% |
| !! | ATGATGAATGTGTTTACTTT+TGG | + | chr1_1:59017294-59017313 | Msa0032100:CDS | 25.0% |
| ! | TGTCTTGATGAATAAACTAT+TGG | - | chr1_1:59018169-59018188 | None:intergenic | 25.0% |
| ! | ATAGTTTATTCATCAAGACA+TGG | + | chr1_1:59018169-59018188 | Msa0032100:CDS | 25.0% |
| ! | TAGTTTATTCATCAAGACAT+GGG | + | chr1_1:59018170-59018189 | Msa0032100:CDS | 25.0% |
| ! | ACAGAAAACCTAACAAATAT+TGG | - | chr1_1:59018442-59018461 | None:intergenic | 25.0% |
| !!! | AATATTTGTTAGGTTTTCTG+TGG | + | chr1_1:59018441-59018460 | Msa0032100:CDS | 25.0% |
| ! | CTGTTGGAAATAATTCAAAA+AGG | - | chr1_1:59018471-59018490 | None:intergenic | 25.0% |
| ! | TCTGAAAACATACCATTATT+AGG | - | chr1_1:59018658-59018677 | None:intergenic | 25.0% |
| !! | TATGTTTTCAGACTTTGATT+TGG | + | chr1_1:59018666-59018685 | Msa0032100:three_prime_UTR | 25.0% |
| !!! | AGCGAACAAATTTTGATTTT+TGG | + | chr1_1:59018766-59018785 | Msa0032100:three_prime_UTR | 25.0% |
| ! | AAAATTCCAAACTTGATATC+TGG | + | chr1_1:59018796-59018815 | Msa0032100:three_prime_UTR | 25.0% |
| ! | ACACTGAAAACAAAAGAATT+TGG | - | chr1_1:59018899-59018918 | None:intergenic | 25.0% |
| ! | AGAACATGTATATACATTTG+TGG | + | chr1_1:59019103-59019122 | Msa0032100:three_prime_UTR | 25.0% |
| ! | ATATTATTGCTAAAGGTTGA+TGG | + | chr1_1:59019141-59019160 | Msa0032100:three_prime_UTR | 25.0% |
| !! | TATTATTGCTAAAGGTTGAT+GGG | + | chr1_1:59019142-59019161 | Msa0032100:three_prime_UTR | 25.0% |
| TCTCTCTTCTTTCTAATAAG+AGG | + | chr1_1:59016403-59016422 | Msa0032100:five_prime_UTR | 30.0% | |
| !! | TGTAACTTGTATTTTCCCAA+GGG | - | chr1_1:59017012-59017031 | None:intergenic | 30.0% |
| !! | TTGTAACTTGTATTTTCCCA+AGG | - | chr1_1:59017013-59017032 | None:intergenic | 30.0% |
| ! | TTTCACGTTTTATAGACCTT+TGG | + | chr1_1:59017091-59017110 | Msa0032100:five_prime_UTR | 30.0% |
| AGAAAAATTCTTTCCAGGTT+TGG | + | chr1_1:59017465-59017484 | Msa0032100:CDS | 30.0% | |
| GGTAAAGCTATAGATTATCA+CGG | + | chr1_1:59017767-59017786 | Msa0032100:CDS | 30.0% | |
| ! | ATTATTTCTCGCATCTTCAT+CGG | - | chr1_1:59017849-59017868 | None:intergenic | 30.0% |
| TGCGAGAAATAATCTTAAGA+AGG | + | chr1_1:59017856-59017875 | Msa0032100:CDS | 30.0% | |
| GCGAGAAATAATCTTAAGAA+GGG | + | chr1_1:59017857-59017876 | Msa0032100:CDS | 30.0% | |
| CTTTACTGATATTGCAATGT+GGG | + | chr1_1:59017934-59017953 | Msa0032100:CDS | 30.0% | |
| GTTCATCAATGACACTTTAA+GGG | - | chr1_1:59017987-59018006 | None:intergenic | 30.0% | |
| TGTTCATCAATGACACTTTA+AGG | - | chr1_1:59017988-59018007 | None:intergenic | 30.0% | |
| AACATTGAGATGAACAAGAT+CGG | + | chr1_1:59018004-59018023 | Msa0032100:CDS | 30.0% | |
| !! | ATTCGATTTGGAGTTTATTC+AGG | + | chr1_1:59018135-59018154 | Msa0032100:CDS | 30.0% |
| AGAACGTGAATCATATACAA+TGG | - | chr1_1:59018392-59018411 | None:intergenic | 30.0% | |
| ACATGCTTCCAATATTTGTT+AGG | + | chr1_1:59018431-59018450 | Msa0032100:CDS | 30.0% | |
| TCCAATCATTCTTATGGTAA+AGG | + | chr1_1:59018611-59018630 | Msa0032100:three_prime_UTR | 30.0% | |
| TCCTTTACCATAAGAATGAT+TGG | - | chr1_1:59018615-59018634 | None:intergenic | 30.0% | |
| TCATCTTTCTGTCCTAATAA+TGG | + | chr1_1:59018643-59018662 | Msa0032100:three_prime_UTR | 30.0% | |
| ACAAAAGAATTTGGATTGTC+TGG | - | chr1_1:59018890-59018909 | None:intergenic | 30.0% | |
| ! | CTATACATACAGTTGATACA+TGG | - | chr1_1:59018956-59018975 | None:intergenic | 30.0% |
| GTATCAACTGTATGTATAGA+AGG | + | chr1_1:59018957-59018976 | Msa0032100:three_prime_UTR | 30.0% | |
| ! | TGTATGTATAGAAGGTGTAT+AGG | + | chr1_1:59018965-59018984 | Msa0032100:three_prime_UTR | 30.0% |
| GTAGTTACTTATAGCTTTCT+TGG | + | chr1_1:59019004-59019023 | Msa0032100:three_prime_UTR | 30.0% | |
| TTCATTCGTATTGCTTGTAA+TGG | + | chr1_1:59019178-59019197 | Msa0032100:three_prime_UTR | 30.0% | |
| ! | TCTAATAAGAGGTTGCTTTG+TGG | + | chr1_1:59016414-59016433 | Msa0032100:five_prime_UTR | 35.0% |
| AGTTTGTGAGTGATATACTC+AGG | + | chr1_1:59016960-59016979 | Msa0032100:intron | 35.0% | |
| TGGAGATGCACAAATTCTAA+CGG | + | chr1_1:59017056-59017075 | Msa0032100:five_prime_UTR | 35.0% | |
| ATGCACAAATTCTAACGGAA+AGG | + | chr1_1:59017061-59017080 | Msa0032100:five_prime_UTR | 35.0% | |
| !! | TAAGTGGCTTTTTAAGAGCT+GGG | - | chr1_1:59017244-59017263 | None:intergenic | 35.0% |
| !! | TTAAGTGGCTTTTTAAGAGC+TGG | - | chr1_1:59017245-59017264 | None:intergenic | 35.0% |
| CATCGAACTTCTTCAACTTT+CGG | - | chr1_1:59017383-59017402 | None:intergenic | 35.0% | |
| GTCGAAGAAAAATTCTTTCC+AGG | + | chr1_1:59017460-59017479 | Msa0032100:CDS | 35.0% | |
| CACTTGTTCAGAATCAAAGT+AGG | - | chr1_1:59017558-59017577 | None:intergenic | 35.0% | |
| CTACTTTGATTCTGAACAAG+TGG | + | chr1_1:59017556-59017575 | Msa0032100:CDS | 35.0% | |
| CATGCTCTTATTGAGCATTA+CGG | + | chr1_1:59017644-59017663 | Msa0032100:CDS | 35.0% | |
| ATGCTCTTATTGAGCATTAC+GGG | + | chr1_1:59017645-59017664 | Msa0032100:CDS | 35.0% | |
| TCAGGATGAAAATATACCGT+TGG | - | chr1_1:59017671-59017690 | None:intergenic | 35.0% | |
| TGAGAAATACATGCCATCAT+CGG | + | chr1_1:59017691-59017710 | Msa0032100:CDS | 35.0% | |
| ! | TGGAGCAATTTTGTATACTG+CGG | + | chr1_1:59017733-59017752 | Msa0032100:CDS | 35.0% |
| !! | GATATAATGATGGTGCGTTT+TGG | + | chr1_1:59017810-59017829 | Msa0032100:CDS | 35.0% |
| GTTCATGTAAAACCAGCATT+AGG | + | chr1_1:59017905-59017924 | Msa0032100:CDS | 35.0% | |
| CCACATTGCAATATCAGTAA+AGG | - | chr1_1:59017936-59017955 | None:intergenic | 35.0% | |
| CCTTTACTGATATTGCAATG+TGG | + | chr1_1:59017933-59017952 | Msa0032100:CDS | 35.0% | |
| ! | ATGGGTTAATGCATTCGATT+TGG | + | chr1_1:59018123-59018142 | Msa0032100:CDS | 35.0% |
| CTCATATATTGCAACCAACA+TGG | - | chr1_1:59018355-59018374 | None:intergenic | 35.0% | |
| GTTGCAATATATGAGAGAGT+GGG | + | chr1_1:59018360-59018379 | Msa0032100:CDS | 35.0% | |
| TTGCAATATATGAGAGAGTG+GGG | + | chr1_1:59018361-59018380 | Msa0032100:CDS | 35.0% | |
| CGTGAATCATATACAATGGT+AGG | - | chr1_1:59018388-59018407 | None:intergenic | 35.0% | |
| TTATTTCCAACAGAGCTTTC+TGG | + | chr1_1:59018478-59018497 | Msa0032100:CDS | 35.0% | |
| ! | TGATGATAGTGTGAATGTGT+GGG | + | chr1_1:59018854-59018873 | Msa0032100:three_prime_UTR | 35.0% |
| !! | TGTTTTCAGTGTGTCATTGA+TGG | + | chr1_1:59018907-59018926 | Msa0032100:three_prime_UTR | 35.0% |
| ! | ATGTATAGAAGGTGTATAGG+AGG | + | chr1_1:59018968-59018987 | Msa0032100:three_prime_UTR | 35.0% |
| CTATAAGTAACTACTATCCG+AGG | - | chr1_1:59018998-59019017 | None:intergenic | 35.0% | |
| TGTAGATCCGATGTTTAAGT+TGG | + | chr1_1:59019047-59019066 | Msa0032100:three_prime_UTR | 35.0% | |
| ! | CGTATTGCTTGTAATGGAAT+AGG | + | chr1_1:59019184-59019203 | Msa0032100:three_prime_UTR | 35.0% |
| TAATGGAATAGGAATGTGCT+TGG | + | chr1_1:59019195-59019214 | Msa0032100:three_prime_UTR | 35.0% | |
| ! | TAAGAGGTTGCTTTGTGGTT+TGG | + | chr1_1:59016419-59016438 | Msa0032100:five_prime_UTR | 40.0% |
| !! | GTTGCTTTGTGGTTTGGTAA+GGG | + | chr1_1:59016425-59016444 | Msa0032100:five_prime_UTR | 40.0% |
| TTTGGTTGCGAGTGTTTGTT+GGG | + | chr1_1:59016451-59016470 | Msa0032100:five_prime_UTR | 40.0% | |
| GATCAGCGTCAAAGAATTCT+GGG | - | chr1_1:59016484-59016503 | None:intergenic | 40.0% | |
| AGAGGTGAAGGAAGAGAAAA+GGG | - | chr1_1:59016512-59016531 | None:intergenic | 40.0% | |
| AAGAGGTGAAGGAAGAGAAA+AGG | - | chr1_1:59016513-59016532 | None:intergenic | 40.0% | |
| TTGTGAGTGATATACTCAGG+TGG | + | chr1_1:59016963-59016982 | Msa0032100:intron | 40.0% | |
| !! | AATTCTAACGGAAAGGCACT+AGG | + | chr1_1:59017068-59017087 | Msa0032100:five_prime_UTR | 40.0% |
| ! | AATCCATCTGGAATCTCCAA+AGG | - | chr1_1:59017110-59017129 | None:intergenic | 40.0% |
| !! | AAGTGGCTTTTTAAGAGCTG+GGG | - | chr1_1:59017243-59017262 | None:intergenic | 40.0% |
| ! | TTATAACCCTTTGGAGGGTT+AGG | - | chr1_1:59017323-59017342 | None:intergenic | 40.0% |
| AACTTTCGGTTCATCTGGAT+TGG | - | chr1_1:59017369-59017388 | None:intergenic | 40.0% | |
| TCTTCAACTTTCGGTTCATC+TGG | - | chr1_1:59017374-59017393 | None:intergenic | 40.0% | |
| CTCGCAAACTTCTGTTAGAT+CGG | - | chr1_1:59017414-59017433 | None:intergenic | 40.0% | |
| AAGGTTGTGTATTCCAAACC+TGG | - | chr1_1:59017481-59017500 | None:intergenic | 40.0% | |
| AATACACAACCTTGCGATAG+AGG | + | chr1_1:59017488-59017507 | Msa0032100:CDS | 40.0% | |
| TCTGTTGGAACATTCTTCTG+TGG | + | chr1_1:59017530-59017549 | Msa0032100:CDS | 40.0% | |
| GCATGAATCTGGTTGAGATT+CGG | - | chr1_1:59017629-59017648 | None:intergenic | 40.0% | |
| ! | GCTCAATAAGAGCATGAATC+TGG | - | chr1_1:59017640-59017659 | None:intergenic | 40.0% |
| GATGGCATGTATTTCTCATC+AGG | - | chr1_1:59017689-59017708 | None:intergenic | 40.0% | |
| !!! | GTGTCGTGGTTTTTCAAGAA+TGG | + | chr1_1:59017713-59017732 | Msa0032100:CDS | 40.0% |
| ! | GGAGCAATTTTGTATACTGC+GGG | + | chr1_1:59017734-59017753 | Msa0032100:CDS | 40.0% |
| TATACTGCGGGTAATGCAAA+GGG | + | chr1_1:59017746-59017765 | Msa0032100:CDS | 40.0% | |
| TATCACGGCACAAATTTACC+TGG | + | chr1_1:59017782-59017801 | Msa0032100:CDS | 40.0% | |
| CATGTAAAACCAGCATTAGG+AGG | + | chr1_1:59017908-59017927 | Msa0032100:CDS | 40.0% | |
| !!! | TGGGTTTTTTGCCCATTCAA+TGG | + | chr1_1:59017953-59017972 | Msa0032100:CDS | 40.0% |
| ! | AATGACACTTTAAGGGTTGC+AGG | - | chr1_1:59017980-59017999 | None:intergenic | 40.0% |
| AACAAGATCGGTGAACATGT+CGG | + | chr1_1:59018016-59018035 | Msa0032100:CDS | 40.0% | |
| AAAAACAGACCAAAGCTCTC+CGG | - | chr1_1:59018080-59018099 | None:intergenic | 40.0% | |
| !!! | GTTTTTTTCTCTGAGCACAG+TGG | + | chr1_1:59018094-59018113 | Msa0032100:CDS | 40.0% |
| GGATCATCCAAACTTGGAAT+AGG | + | chr1_1:59018229-59018248 | Msa0032100:CDS | 40.0% | |
| AGATACAAGATTGTTGCTGC+CGG | + | chr1_1:59018301-59018320 | Msa0032100:CDS | 40.0% | |
| GAGTCATTACAGAACCATGT+TGG | + | chr1_1:59018338-59018357 | Msa0032100:CDS | 40.0% | |
| GGTTGCAATATATGAGAGAG+TGG | + | chr1_1:59018359-59018378 | Msa0032100:CDS | 40.0% | |
| GAGAAATGGCTAGTAGCATA+TGG | - | chr1_1:59018581-59018600 | None:intergenic | 40.0% | |
| GCTGGATCCAATCATTCTTA+TGG | + | chr1_1:59018605-59018624 | Msa0032100:three_prime_UTR | 40.0% | |
| CTGCGTGAATGCGTAAATTT+GGG | - | chr1_1:59018698-59018717 | None:intergenic | 40.0% | |
| ACTGCGTGAATGCGTAAATT+TGG | - | chr1_1:59018699-59018718 | None:intergenic | 40.0% | |
| AATTTACGCATTCACGCAGT+CGG | + | chr1_1:59018699-59018718 | Msa0032100:three_prime_UTR | 40.0% | |
| TCACACTATCATCAGCACAT+CGG | - | chr1_1:59018848-59018867 | None:intergenic | 40.0% | |
| ! | CTGATGATAGTGTGAATGTG+TGG | + | chr1_1:59018853-59018872 | Msa0032100:three_prime_UTR | 40.0% |
| GAATAGGAATGTGCTTGGTT+CGG | + | chr1_1:59019200-59019219 | Msa0032100:three_prime_UTR | 40.0% | |
| !! | GGTTGCTTTGTGGTTTGGTA+AGG | + | chr1_1:59016424-59016443 | Msa0032100:five_prime_UTR | 45.0% |
| !! | GTGGTTTGGTAAGGGATGTT+TGG | + | chr1_1:59016433-59016452 | Msa0032100:five_prime_UTR | 45.0% |
| GTTTGGTTGCGAGTGTTTGT+TGG | + | chr1_1:59016450-59016469 | Msa0032100:five_prime_UTR | 45.0% | |
| GGATCAGCGTCAAAGAATTC+TGG | - | chr1_1:59016485-59016504 | None:intergenic | 45.0% | |
| GAAGGAAGAGAAAAGGGAAG+TGG | - | chr1_1:59016506-59016525 | None:intergenic | 45.0% | |
| TTCCTTCACCTCTTCCACAA+TGG | + | chr1_1:59016519-59016538 | Msa0032100:five_prime_UTR | 45.0% | |
| AGAATACCTTGTGGCCATTG+TGG | - | chr1_1:59016536-59016555 | None:intergenic | 45.0% | |
| TGAGTGATATACTCAGGTGG+CGG | + | chr1_1:59016966-59016985 | Msa0032100:intron | 45.0% | |
| ! | AGACCTTTGGAGATTCCAGA+TGG | + | chr1_1:59017104-59017123 | Msa0032100:five_prime_UTR | 45.0% |
| CCAAGACAGGAAAATCCATC+TGG | - | chr1_1:59017122-59017141 | None:intergenic | 45.0% | |
| !! | CCAGATGGATTTTCCTGTCT+TGG | + | chr1_1:59017119-59017138 | Msa0032100:five_prime_UTR | 45.0% |
| ! | CGGCTTTATAACCCTTTGGA+GGG | - | chr1_1:59017328-59017347 | None:intergenic | 45.0% |
| ! | ACGGCTTTATAACCCTTTGG+AGG | - | chr1_1:59017329-59017348 | None:intergenic | 45.0% |
| CCAAAGGGTTATAAAGCCGT+CGG | + | chr1_1:59017329-59017348 | Msa0032100:CDS | 45.0% | |
| ! | TTTCGGTTCATCTGGATTGG+TGG | - | chr1_1:59017366-59017385 | None:intergenic | 45.0% |
| ! | GATAGAGGTATGCTAGCTAG+AGG | + | chr1_1:59017503-59017522 | Msa0032100:CDS | 45.0% |
| ! | CTAGCTAGAGGTGTATCTGT+TGG | + | chr1_1:59017515-59017534 | Msa0032100:CDS | 45.0% |
| TATTGAGCATTACGGGCCAA+CGG | + | chr1_1:59017652-59017671 | Msa0032100:CDS | 45.0% | |
| AAAAACCACGACACCGATGA+TGG | - | chr1_1:59017707-59017726 | None:intergenic | 45.0% | |
| GTATACTGCGGGTAATGCAA+AGG | + | chr1_1:59017745-59017764 | Msa0032100:CDS | 45.0% | |
| CCATCATTATATCCTCCACC+AGG | - | chr1_1:59017803-59017822 | None:intergenic | 45.0% | |
| CCTGGTGGAGGATATAATGA+TGG | + | chr1_1:59017800-59017819 | Msa0032100:CDS | 45.0% | |
| TTTCTCGCATCTTCATCGGT+AGG | - | chr1_1:59017845-59017864 | None:intergenic | 45.0% | |
| GAAGGGAAACATAGAGAGTG+CGG | + | chr1_1:59017874-59017893 | Msa0032100:CDS | 45.0% | |
| ! | TTTTTCTCTGAGCACAGTGG+AGG | + | chr1_1:59018097-59018116 | Msa0032100:CDS | 45.0% |
| TGAGCACAGTGGAGGTAAAT+GGG | + | chr1_1:59018105-59018124 | Msa0032100:CDS | 45.0% | |
| ATGCTAGCTATCCTCATGCA+GGG | + | chr1_1:59018194-59018213 | Msa0032100:CDS | 45.0% | |
| CAAGTTTGGATGATCCCTGA+AGG | - | chr1_1:59018225-59018244 | None:intergenic | 45.0% | |
| CTTCAGGGATCATCCAAACT+TGG | + | chr1_1:59018223-59018242 | Msa0032100:CDS | 45.0% | |
| GCGAACTCCTATTCCAAGTT+TGG | - | chr1_1:59018239-59018258 | None:intergenic | 45.0% | |
| GATACAAGATTGTTGCTGCC+GGG | + | chr1_1:59018302-59018321 | Msa0032100:CDS | 45.0% | |
| GTCCAAAGGAGAAGGACAAT+TGG | + | chr1_1:59018518-59018537 | Msa0032100:CDS | 45.0% | |
| AGCCAATTGTCCTTCTCCTT+TGG | - | chr1_1:59018523-59018542 | None:intergenic | 45.0% | |
| AAGGAGAAGGACAATTGGCT+AGG | + | chr1_1:59018523-59018542 | Msa0032100:CDS | 45.0% | |
| ACTAGCCATTTCTCATGAGC+TGG | + | chr1_1:59018587-59018606 | Msa0032100:three_prime_UTR | 45.0% | |
| TGGATCCAGCTCATGAGAAA+TGG | - | chr1_1:59018595-59018614 | None:intergenic | 45.0% | |
| GACGGACCAGATATCAAGTT+TGG | - | chr1_1:59018805-59018824 | None:intergenic | 45.0% | |
| TCCGTCCAATCTAGATCCAA+CGG | + | chr1_1:59018819-59018838 | Msa0032100:three_prime_UTR | 45.0% | |
| GATACATGGCGACGATATCT+TGG | - | chr1_1:59018942-59018961 | None:intergenic | 45.0% | |
| CCCAAGGGATATTCTTCCAC+CGG | - | chr1_1:59016997-59017016 | None:intergenic | 50.0% | |
| CCGGTGGAAGAATATCCCTT+GGG | + | chr1_1:59016994-59017013 | Msa0032100:five_prime_UTR | 50.0% | |
| GTGGCAGTAGTAACCAAGAC+AGG | - | chr1_1:59017135-59017154 | None:intergenic | 50.0% | |
| ACAAGAACGTGTCCTCGCAA+CGG | - | chr1_1:59017170-59017189 | None:intergenic | 50.0% | |
| GACTCGGAACAATCAGCTTG+AGG | - | chr1_1:59017215-59017234 | None:intergenic | 50.0% | |
| AAGAGCTGGGGATTCTGACT+CGG | - | chr1_1:59017231-59017250 | None:intergenic | 50.0% | |
| TTGGTTGCCTAACCCTCCAA+AGG | + | chr1_1:59017313-59017332 | Msa0032100:CDS | 50.0% | |
| TGGTTGCCTAACCCTCCAAA+GGG | + | chr1_1:59017314-59017333 | Msa0032100:CDS | 50.0% | |
| ! | CCGACGGCTTTATAACCCTT+TGG | - | chr1_1:59017332-59017351 | None:intergenic | 50.0% |
| GGTGGTAACTACTATGCCGA+CGG | - | chr1_1:59017348-59017367 | None:intergenic | 50.0% | |
| GCTAGCATACCTCTATCGCA+AGG | - | chr1_1:59017500-59017519 | None:intergenic | 50.0% | |
| CACGGCACAAATTTACCTGG+TGG | + | chr1_1:59017785-59017804 | Msa0032100:CDS | 50.0% | |
| GGCACAAATTTACCTGGTGG+AGG | + | chr1_1:59017788-59017807 | Msa0032100:CDS | 50.0% | |
| GTAAAGGCTCCTCCTAATGC+TGG | - | chr1_1:59017920-59017939 | None:intergenic | 50.0% | |
| GGGTTGCAGGTCCATTGAAT+GGG | - | chr1_1:59017967-59017986 | None:intergenic | 50.0% | |
| AGGGTTGCAGGTCCATTGAA+TGG | - | chr1_1:59017968-59017987 | None:intergenic | 50.0% | |
| TCGGTGAACATGTCGGTGAT+TGG | + | chr1_1:59018023-59018042 | Msa0032100:CDS | 50.0% | |
| CGGTGAACATGTCGGTGATT+GGG | + | chr1_1:59018024-59018043 | Msa0032100:CDS | 50.0% | |
| CTGAGCACAGTGGAGGTAAA+TGG | + | chr1_1:59018104-59018123 | Msa0032100:CDS | 50.0% | |
| CATGCTAGCTATCCTCATGC+AGG | + | chr1_1:59018193-59018212 | Msa0032100:CDS | 50.0% | |
| TGAAGGTAAGTCCCTGCATG+AGG | - | chr1_1:59018208-59018227 | None:intergenic | 50.0% | |
| TCATGCAGGGACTTACCTTC+AGG | + | chr1_1:59018207-59018226 | Msa0032100:CDS | 50.0% | |
| CATGCAGGGACTTACCTTCA+GGG | + | chr1_1:59018208-59018227 | Msa0032100:CDS | 50.0% | |
| ATTGTTGCTGCCGGGTATCT+TGG | + | chr1_1:59018310-59018329 | Msa0032100:CDS | 50.0% | |
| GACTCCATCACCAAGATACC+CGG | - | chr1_1:59018323-59018342 | None:intergenic | 50.0% | |
| ! | TCCAACAGAGCTTTCTGGTG+AGG | + | chr1_1:59018483-59018502 | Msa0032100:CDS | 50.0% |
| TCCTCACCAGAAAGCTCTGT+TGG | - | chr1_1:59018487-59018506 | None:intergenic | 50.0% | |
| ! | AACAGAGCTTTCTGGTGAGG+AGG | + | chr1_1:59018486-59018505 | Msa0032100:CDS | 50.0% |
| ! | ACAGAGCTTTCTGGTGAGGA+GGG | + | chr1_1:59018487-59018506 | Msa0032100:CDS | 50.0% |
| TCCTTCTCCTTTGGACCAGT+TGG | - | chr1_1:59018514-59018533 | None:intergenic | 50.0% | |
| GCCGTTGGATCTAGATTGGA+CGG | - | chr1_1:59018823-59018842 | None:intergenic | 50.0% | |
| CACTATCATCAGCACATCGG+TGG | - | chr1_1:59018845-59018864 | None:intergenic | 50.0% | |
| GGCCATTGTGGAAGAGGTGA+AGG | - | chr1_1:59016524-59016543 | None:intergenic | 55.0% | |
| CCTTGTGGCCATTGTGGAAG+AGG | - | chr1_1:59016530-59016549 | None:intergenic | 55.0% | |
| CCTCTTCCACAATGGCCACA+AGG | + | chr1_1:59016527-59016546 | Msa0032100:five_prime_UTR | 55.0% | |
| !! | TACTCAGGTGGCGGTTTTGC+CGG | + | chr1_1:59016975-59016994 | Msa0032100:intron | 55.0% |
| GCCGGTGGAAGAATATCCCT+TGG | + | chr1_1:59016993-59017012 | Msa0032100:five_prime_UTR | 55.0% | |
| GCAACGGCTGATCATTGGAG+TGG | - | chr1_1:59017154-59017173 | None:intergenic | 55.0% | |
| TCCAATGATCAGCCGTTGCG+AGG | + | chr1_1:59017155-59017174 | Msa0032100:five_prime_UTR | 55.0% | |
| TCCTCGCAACGGCTGATCAT+TGG | - | chr1_1:59017159-59017178 | None:intergenic | 55.0% | |
| GAGGACACGTTCTTGTCGCT+CGG | + | chr1_1:59017174-59017193 | Msa0032100:five_prime_UTR | 55.0% | |
| AGGACACGTTCTTGTCGCTC+GGG | + | chr1_1:59017175-59017194 | Msa0032100:five_prime_UTR | 55.0% | |
| !! | ACATGCCATCATCGGTGTCG+TGG | + | chr1_1:59017699-59017718 | Msa0032100:CDS | 55.0% |
| GGTGAAGTTGCTCACGCGAA+GGG | - | chr1_1:59018059-59018078 | None:intergenic | 55.0% | |
| CTTCGCGTGAGCAACTTCAC+CGG | + | chr1_1:59018058-59018077 | Msa0032100:CDS | 55.0% | |
| GCAACTTCACCGGAGAGCTT+TGG | + | chr1_1:59018068-59018087 | Msa0032100:CDS | 55.0% | |
| ! | CAGAGCTTTCTGGTGAGGAG+GGG | + | chr1_1:59018488-59018507 | Msa0032100:CDS | 55.0% |
| GCCAACTGGTCCAAAGGAGA+AGG | + | chr1_1:59018510-59018529 | Msa0032100:CDS | 55.0% | |
| GGTGGCCGTTGGATCTAGAT+TGG | - | chr1_1:59018827-59018846 | None:intergenic | 55.0% | |
| ! | GGTGTATAGGAGGTGTGCCT+CGG | + | chr1_1:59018978-59018997 | Msa0032100:three_prime_UTR | 55.0% |
| CGGTGAAGTTGCTCACGCGA+AGG | - | chr1_1:59018060-59018079 | None:intergenic | 60.0% | |
| GCTGCCGGGTATCTTGGTGA+TGG | + | chr1_1:59018316-59018335 | Msa0032100:CDS | 60.0% | |
| TACGCATTCACGCAGTCGGC+AGG | + | chr1_1:59018703-59018722 | Msa0032100:three_prime_UTR | 60.0% | |
| GCAGGCACGTCAGTGGTCAT+TGG | + | chr1_1:59018721-59018740 | Msa0032100:three_prime_UTR | 60.0% | |
| ATCAGCACATCGGTGGCCGT+TGG | - | chr1_1:59018838-59018857 | None:intergenic | 60.0% | |
| !! | TCAGGTGGCGGTTTTGCCGG+TGG | + | chr1_1:59016978-59016997 | Msa0032100:intron | 65.0% |
| TCTGGTGAGGAGGGGCCAAC+TGG | + | chr1_1:59018496-59018515 | Msa0032100:CDS | 65.0% | |
| GGAGGGGCCAACTGGTCCAA+AGG | + | chr1_1:59018504-59018523 | Msa0032100:CDS | 65.0% | |
| GCAGTCGGCAGGCACGTCAG+TGG | + | chr1_1:59018714-59018733 | Msa0032100:three_prime_UTR | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_1 | gene | 59016391 | 59019250 | 59016391 | ID=Msa0032100;Name=Msa0032100 |
| chr1_1 | mRNA | 59016391 | 59019250 | 59016391 | ID=Msa0032100-mRNA-1;Parent=Msa0032100;Name=Msa0032100-mRNA-1;_AED=0.01;_eAED=0.01;_QI=460|1|1|1|1|1|2|689|425 |
| chr1_1 | exon | 59016391 | 59016548 | 59016391 | ID=Msa0032100-mRNA-1:exon:18111;Parent=Msa0032100-mRNA-1 |
| chr1_1 | exon | 59016982 | 59019250 | 59016982 | ID=Msa0032100-mRNA-1:exon:18112;Parent=Msa0032100-mRNA-1 |
| chr1_1 | five_prime_UTR | 59016391 | 59016548 | 59016391 | ID=Msa0032100-mRNA-1:five_prime_utr;Parent=Msa0032100-mRNA-1 |
| chr1_1 | five_prime_UTR | 59016982 | 59017283 | 59016982 | ID=Msa0032100-mRNA-1:five_prime_utr;Parent=Msa0032100-mRNA-1 |
| chr1_1 | CDS | 59017284 | 59018561 | 59017284 | ID=Msa0032100-mRNA-1:cds;Parent=Msa0032100-mRNA-1 |
| chr1_1 | three_prime_UTR | 59018562 | 59019250 | 59018562 | ID=Msa0032100-mRNA-1:three_prime_utr;Parent=Msa0032100-mRNA-1 |
| Gene Sequence |
| Protein sequence |
