AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1184910

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1184910 MtrunA17_Chr8g0350401 95.156 289 11 2 1 287 1 288 0.0 569
Msa1184910 MtrunA17_Chr4g0057281 61.628 258 97 1 23 280 19 274 5.98e-122 350
Msa1184910 MtrunA17_Chr1g0203751 61.176 255 96 1 23 277 28 279 3.23e-119 343
Msa1184910 MtrunA17_Chr6g0472801 56.115 278 118 2 1 278 1 274 2.15e-118 341
Msa1184910 MtrunA17_Chr5g0397981 55.396 278 113 3 1 277 19 286 1.95e-114 332
Msa1184910 MtrunA17_Chr7g0265551 54.296 291 115 3 1 280 73 356 1.11e-107 317
Msa1184910 MtrunA17_Chr7g0272101 26.592 267 161 5 26 275 4 252 5.21e-33 122
Msa1184910 MtrunA17_Chr4g0010881 27.381 252 158 5 26 275 4 232 1.62e-29 112
Msa1184910 MtrunA17_Chr1g0189591 36.806 144 89 2 25 167 15 157 8.45e-23 95.5
Msa1184910 MtrunA17_Chr7g0272091 25.090 279 174 6 26 277 10 280 2.81e-22 94.0
Msa1184910 MtrunA17_Chr1g0192371 30.303 198 118 5 26 219 11 192 9.87e-22 92.0
Msa1184910 MtrunA17_Chr1g0189671 29.187 209 130 3 25 232 6 197 1.12e-21 92.0
Msa1184910 MtrunA17_Chr1g0189611 31.515 165 108 3 25 186 6 168 1.67e-21 91.3
Msa1184910 MtrunA17_Chr1g0189751 30.660 212 125 4 22 230 3 195 7.25e-21 90.1
Msa1184910 MtrunA17_Chr1g0189821 32.919 161 103 3 25 182 6 164 1.60e-20 88.6
Msa1184910 MtrunA17_Chr1g0189641 31.544 149 98 1 22 170 3 147 8.12e-20 87.0
Msa1184910 MtrunA17_Chr1g0189721 30.357 168 109 3 22 186 3 165 1.49e-19 85.9
Msa1184910 MtrunA17_Chr1g0189621 25.670 261 177 7 25 275 6 259 2.90e-19 85.1
Msa1184910 MtrunA17_Chr1g0203281 25.362 276 171 9 25 277 6 269 3.54e-19 85.1
Msa1184910 MtrunA17_Chr1g0203331 34.848 132 80 2 40 170 6 132 7.65e-19 83.6
Msa1184910 MtrunA17_Chr1g0190071 31.056 161 107 3 25 182 6 165 2.06e-18 83.2
Msa1184910 MtrunA17_Chr3g0097191 24.549 277 165 8 23 277 10 264 4.92e-16 76.3
Msa1184910 MtrunA17_Chr1g0189781 30.822 146 99 2 26 170 11 155 2.15e-15 74.3
Msa1184910 MtrunA17_Chr1g0189771 29.452 146 101 2 26 170 15 159 3.53e-14 69.3
Msa1184910 MtrunA17_Chr1g0189661 33.113 151 90 4 25 170 6 150 5.34e-14 70.9
Msa1184910 MtrunA17_Chr3g0095261 29.054 148 91 5 23 167 10 146 1.51e-12 66.6
Msa1184910 MtrunA17_Chr7g0260801 26.131 199 124 4 25 220 18 196 1.52e-12 66.2
Msa1184910 MtrunA17_Chr3g0078331 26.816 179 112 6 19 182 13 187 3.24e-12 65.9
Msa1184910 MtrunA17_Chr1g0189711 26.126 222 134 9 25 234 6 209 1.41e-11 63.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1184910 AT3G61060.1 60.714 280 104 3 1 277 1 277 7.93e-125 358
Msa1184910 AT3G61060.2 60.498 281 104 4 1 277 1 278 5.97e-123 353
Msa1184910 AT1G12710.1 56.989 279 113 3 4 281 11 283 1.49e-112 327
Msa1184910 AT5G52120.1 55.598 259 112 1 23 278 21 279 2.40e-110 321
Msa1184910 AT3G53000.1 52.703 296 123 4 1 285 1 290 2.04e-104 306
Msa1184910 AT1G63090.1 55.197 279 116 3 4 281 11 281 1.74e-103 303
Msa1184910 AT1G12710.2 49.533 321 113 4 4 281 11 325 1.74e-103 305
Msa1184910 AT2G02360.1 32.075 159 97 3 27 182 18 168 2.97e-23 96.7
Msa1184910 AT1G09155.1 25.685 292 160 6 26 277 3 277 3.22e-23 96.7
Msa1184910 AT1G80110.1 27.376 263 173 7 23 277 1 253 5.33e-23 95.5
Msa1184910 AT2G02240.1 27.099 262 166 7 26 275 64 312 2.23e-22 95.1
Msa1184910 AT2G02340.1 31.707 164 103 3 22 182 35 192 6.42e-22 93.6
Msa1184910 AT5G24560.1 26.667 165 106 3 25 182 5 161 4.90e-21 88.6
Msa1184910 AT2G02230.1 34.320 169 98 5 26 189 35 195 5.13e-21 91.7
Msa1184910 AT2G02250.1 30.168 179 112 5 21 194 44 214 2.13e-19 86.7
Msa1184910 AT1G56250.1 29.126 206 127 3 26 229 4 192 9.87e-19 84.3
Msa1184910 AT2G02320.1 29.448 163 100 5 23 181 40 191 1.50e-17 81.6
Msa1184910 AT2G02350.2 30.822 146 87 4 23 164 24 159 2.11e-17 80.9
Msa1184910 AT2G02310.1 31.677 161 99 4 25 182 47 199 3.17e-17 80.5
Msa1184910 AT1G56240.1 24.407 295 160 8 26 277 4 278 7.60e-16 76.3
Msa1184910 AT2G02300.1 25.379 264 161 9 25 275 36 276 1.03e-13 70.1

Find 119 sgRNAs with CRISPR-Local

Find 248 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGGGAATTGGCATGAATTTC+TGG 0.101366 8_1:-21108291 None:intergenic
TTGCTTATCTTCATCAAATT+TGG 0.161534 8_1:+21111002 Msa1184910:CDS
AGTAGCTCTGGTGCTGAATT+AGG 0.162097 8_1:+21109019 Msa1184910:CDS
GTTACACTTTCATTTATAAT+TGG 0.224524 8_1:-21111765 None:intergenic
AAACACGCACTTAGCAATTT+TGG 0.226458 8_1:+21111508 Msa1184910:three_prime_UTR
ACACAATTGGTTCAAAATTC+AGG 0.236369 8_1:+21108354 Msa1184910:five_prime_UTR
TGTATGTCCCTACTGGAAAT+TGG 0.254973 8_1:-21111054 None:intergenic
GGCATTGGTGTTGATGTATT+TGG 0.267377 8_1:+21108862 Msa1184910:CDS
TTACTTTGGTTTAGGAAATC+TGG 0.291239 8_1:+21109663 Msa1184910:intron
AACTCGTCGGCCGAGCTTCT+TGG 0.292282 8_1:-21111110 None:intergenic
TTCCAAAGCGTTAAGGATTA+CGG 0.314495 8_1:+21109724 Msa1184910:CDS
AAAAGCTAGTTGTGATGAAA+TGG 0.318733 8_1:-21108311 None:intergenic
GGAGATTAACTAGTTTAGTT+TGG 0.321274 8_1:+21108725 Msa1184910:five_prime_UTR
CTCCAAAATATAAAACTATA+AGG 0.324615 8_1:-21108706 None:intergenic
CTGGATTGTCCAAATGAGTA+TGG 0.340026 8_1:-21111216 None:intergenic
GTCGTCAGCTGAAACTTTGC+AGG 0.342371 8_1:-21111169 None:intergenic
AAGAAACCAAACATCTATCT+TGG 0.350180 8_1:-21111589 None:intergenic
CGCTGTATCCCATACTCATT+TGG 0.360067 8_1:+21111207 Msa1184910:CDS
CCCCGTAATCCTTAACGCTT+TGG 0.366232 8_1:-21109726 None:intergenic
GGATAGATGATCGCAGATAT+TGG 0.367089 8_1:+21109747 Msa1184910:CDS
TTGCATGAAGTGTAACATTA+TGG 0.368356 8_1:+21111742 Msa1184910:three_prime_UTR
TCCAAAGCGTTAAGGATTAC+GGG 0.374198 8_1:+21109725 Msa1184910:CDS
CTTTGATTCCCAAACAAAAT+CGG 0.397680 8_1:-21108945 None:intergenic
GTTCTATGAGGCCAAAGCTT+GGG 0.399364 8_1:+21108819 Msa1184910:CDS
GTAAGCTAGCACGATTGAAT+AGG 0.401576 8_1:+21108900 Msa1184910:CDS
GTTTATCATGGGGAAAGCTT+TGG 0.404604 8_1:+21108985 Msa1184910:CDS
TTTAGTTAAATTCAGATTCT+GGG 0.405642 8_1:+21108590 Msa1184910:five_prime_UTR
GTAGCTCTGGTGCTGAATTA+GGG 0.408354 8_1:+21109020 Msa1184910:CDS
TTTAGTTGAATTCAGATTCT+GGG 0.411102 8_1:+21108391 Msa1184910:five_prime_UTR
TTTAGTTGAATTGATATTCT+GGG 0.411302 8_1:+21108674 Msa1184910:five_prime_UTR
TTAACTAGTTTAGTTTGGTT+TGG 0.414593 8_1:+21108730 Msa1184910:five_prime_UTR
AGCTTCCCAAGATAGATGTT+TGG 0.417715 8_1:+21111583 Msa1184910:three_prime_UTR
CATGTGTATGTGATGGGGAT+GGG 0.419594 8_1:+21108789 Msa1184910:CDS
CTTATCTTCATCAAATTTGG+TGG 0.424285 8_1:+21111005 Msa1184910:CDS
CAATTTCTTCCAAAGCGTTA+AGG 0.429144 8_1:+21109717 Msa1184910:CDS
GTTGAATTATGAGTTTATCA+TGG 0.433360 8_1:+21108973 Msa1184910:CDS
TGTTGTGCTTTCTCAAAGAA+TGG 0.435095 8_1:+21111687 Msa1184910:three_prime_UTR
TTAGTGCATGTTTGGTATCA+TGG 0.438087 8_1:+21111448 Msa1184910:three_prime_UTR
GTGTACTCTATTACTTCAGC+TGG 0.441051 8_1:+21111718 Msa1184910:three_prime_UTR
TAAGCTAGCACGATTGAATA+GGG 0.448200 8_1:+21108901 Msa1184910:CDS
GAAGACCGGTGGGGTTTGTA+TGG 0.451191 8_1:+21109694 Msa1184910:CDS
GGGAATTGGCATGAATTTCT+GGG 0.451649 8_1:-21108290 None:intergenic
ATGTGTATGTGATGGGGATG+GGG 0.452601 8_1:+21108790 Msa1184910:CDS
TTGAATTATGAGTTTATCAT+GGG 0.453294 8_1:+21108974 Msa1184910:CDS
GTGATGGATTTGATAAATTG+AGG 0.454011 8_1:+21108437 Msa1184910:five_prime_UTR
CTTGAAGAATCCAATTCAAC+CGG 0.458137 8_1:+21108241 Msa1184910:five_prime_UTR
TCTGGTATATCCCCAAGCTT+TGG 0.464588 8_1:-21108830 None:intergenic
GAGTTGACTTAGTGCATGTT+TGG 0.469491 8_1:+21111440 Msa1184910:three_prime_UTR
AGACCGAGCACATCCATGGC+TGG 0.472037 8_1:+21111137 Msa1184910:CDS
AATCCAATTCAACCGGAAAA+CGG 0.473568 8_1:+21108248 Msa1184910:five_prime_UTR
CATACTCATTTGGACAATCC+AGG 0.476869 8_1:+21111217 Msa1184910:CDS
ACTTCAGACTTCACCTTGGC+AGG 0.477175 8_1:+21111083 Msa1184910:CDS
GTTCCATTGTCAAATAAGCT+AGG 0.477935 8_1:-21109073 None:intergenic
ACCAATGCCACACAACTCTC+TGG 0.478399 8_1:-21108848 None:intergenic
AGTTGTGATGAAATGGGAAT+TGG 0.482857 8_1:-21108304 None:intergenic
TCATGTGTATGTGATGGGGA+TGG 0.483513 8_1:+21108788 Msa1184910:CDS
ATTTGGTGGCTTGAAGTTGA+AGG 0.484413 8_1:+21111019 Msa1184910:CDS
GTGATGAATTCATTAAATTG+AGG 0.484831 8_1:+21108637 Msa1184910:five_prime_UTR
TATCATGGGGAAAGCTTTGG+AGG 0.486059 8_1:+21108988 Msa1184910:CDS
AGAAACCAAACATCTATCTT+GGG 0.486840 8_1:-21111588 None:intergenic
CGTGCTAGCTTACATATATC+CGG 0.487725 8_1:-21108890 None:intergenic
AAAGCTAGTTGTGATGAAAT+GGG 0.490117 8_1:-21108310 None:intergenic
GATGAAGATAAGCAACTGAA+TGG 0.490735 8_1:-21110994 None:intergenic
GACATTGGGAGGTACACAAT+TGG 0.491891 8_1:+21108341 Msa1184910:five_prime_UTR
TACACACTGTATGTCCCTAC+TGG 0.496964 8_1:-21111061 None:intergenic
TTTCCTCATGTGTATGTGAT+GGG 0.501023 8_1:+21108783 Msa1184910:CDS
GAGGATGATACTAGTAGCTC+TGG 0.505477 8_1:+21109007 Msa1184910:CDS
TAAGTGCGTGTTTGATATCA+TGG 0.512969 8_1:-21111498 None:intergenic
TTGATTTCCAATTTCCAGTA+GGG 0.525554 8_1:+21111047 Msa1184910:CDS
AGTTCTATGAGGCCAAAGCT+TGG 0.528263 8_1:+21108818 Msa1184910:CDS
ACCAGAGAGTTGTGTGGCAT+TGG 0.531563 8_1:+21108847 Msa1184910:CDS
TTTCAGCTGACGACTTCTGA+TGG 0.534756 8_1:+21111178 Msa1184910:CDS
GGCAGGTCATCCAAGAAGCT+CGG 0.535630 8_1:+21111100 Msa1184910:CDS
AATAGATTGCACTCATACCA+AGG 0.535661 8_1:+21111321 Msa1184910:CDS
GGCTAGATAAGAAGACCGGT+GGG 0.546129 8_1:+21109684 Msa1184910:CDS
ATTGATTTCCAATTTCCAGT+AGG 0.547843 8_1:+21111046 Msa1184910:CDS
GTCGACACACAAACCACCCT+TGG 0.552331 8_1:-21111338 None:intergenic
ATTTGGACAATCCAGGGCAC+TGG 0.554734 8_1:+21111224 Msa1184910:CDS
GACCGAGCACATCCATGGCT+GGG 0.560312 8_1:+21111138 Msa1184910:CDS
TTCTCAAAGAATGGAATGGT+TGG 0.561798 8_1:+21111696 Msa1184910:three_prime_UTR
CAAAGTTTCCTACATGGTAG+AGG 0.564462 8_1:-21111249 None:intergenic
TTCTATGAGGCCAAAGCTTG+GGG 0.564798 8_1:+21108820 Msa1184910:CDS
ACATTTCGACTGAAGAATCA+AGG 0.566024 8_1:+21109774 Msa1184910:CDS
TGGTAGAGGATCCAGTGCCC+TGG 0.568450 8_1:-21111235 None:intergenic
CTGGTGCTGAATTAGGGAAG+AGG 0.570486 8_1:+21109026 Msa1184910:CDS
TTCCTCATGTGTATGTGATG+GGG 0.572484 8_1:+21108784 Msa1184910:CDS
ATCCCAGCCATGGATGTGCT+CGG 0.573548 8_1:-21111140 None:intergenic
TAGAGACAAAGTTTCCTACA+TGG 0.576728 8_1:-21111255 None:intergenic
TGTAAGACCGAGCACATCCA+TGG 0.577774 8_1:+21111133 Msa1184910:CDS
AAATTCAGATTCTGGGTCTG+TGG 0.580655 8_1:+21108597 Msa1184910:five_prime_UTR
TGCTTTCTCAAAGAATGGAA+TGG 0.588397 8_1:+21111692 Msa1184910:three_prime_UTR
AAGCCTAGCTTATTTGACAA+TGG 0.589381 8_1:+21109070 Msa1184910:CDS
ATGATAAACTCATAATTCAA+CGG 0.590373 8_1:-21108971 None:intergenic
TGGATTGTCCAAATGAGTAT+GGG 0.593977 8_1:-21111215 None:intergenic
ATCTGGCTAGATAAGAAGAC+CGG 0.595975 8_1:+21109680 Msa1184910:CDS
GTTGATGTATTTGGATCCAC+CGG 0.598664 8_1:+21108871 Msa1184910:CDS
TGGTGCTGAATTAGGGAAGA+GGG 0.599625 8_1:+21109027 Msa1184910:CDS
GCTTCTTGGATGACCTGCCA+AGG 0.607702 8_1:-21111096 None:intergenic
GATTGCACTCATACCAAGGG+TGG 0.619652 8_1:+21111325 Msa1184910:CDS
TGGTGGATTTACTAAAATCA+CGG 0.620545 8_1:-21111478 None:intergenic
CTTATTTGACAATGGAACCA+AGG 0.622181 8_1:+21109078 Msa1184910:CDS
TGGCTAGATAAGAAGACCGG+TGG 0.623197 8_1:+21109683 Msa1184910:CDS
CACTGGATCCTCTACCATGT+AGG 0.625677 8_1:+21111241 Msa1184910:CDS
ATGGGGATTGTAGTTCTATG+AGG 0.637876 8_1:+21108807 Msa1184910:CDS
ATACTCATTTGGACAATCCA+GGG 0.642583 8_1:+21111218 Msa1184910:CDS
CCAAAGCGTTAAGGATTACG+GGG 0.642663 8_1:+21109726 Msa1184910:CDS
GCTACTATTGCATATAAGCA+CGG 0.643154 8_1:-21111362 None:intergenic
AACATGCACTAAGTCAACTC+AGG 0.643845 8_1:-21111437 None:intergenic
GCTAGCTTACATATATCCGG+TGG 0.658843 8_1:-21108887 None:intergenic
ATCCCCATCACATACACATG+AGG 0.663735 8_1:-21108786 None:intergenic
TGAATTATGAGTTTATCATG+GGG 0.664410 8_1:+21108975 Msa1184910:CDS
ATAAATACACAAGTCACACA+TGG 0.668418 8_1:-21111639 None:intergenic
ATAGATTGCACTCATACCAA+GGG 0.671071 8_1:+21111322 Msa1184910:CDS
AATTGCCATACAAACCCCAC+CGG 0.672776 8_1:-21109699 None:intergenic
GTGTACTTCAGACTTCACCT+TGG 0.710985 8_1:+21111079 Msa1184910:CDS
GCTCGGTCTTACAAACTCGT+CGG 0.720767 8_1:-21111123 None:intergenic
GCTAGATAAGAAGACCGGTG+GGG 0.725990 8_1:+21109685 Msa1184910:CDS
GGATATACCAGAGAGTTGTG+TGG 0.728873 8_1:+21108841 Msa1184910:CDS
GTGCGTGTTTGATATCATGG+TGG 0.744124 8_1:-21111495 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AATTTTTGGGTTTTATATTT+TGG + chr8_1:21108504-21108523 Msa1184910:five_prime_UTR 15.0%
!!! ATTTTTGGGTTTTATATTTT+GGG + chr8_1:21108505-21108524 Msa1184910:five_prime_UTR 15.0%
!!! AACCTTATAGTTTTATATTT+TGG + chr8_1:21108704-21108723 Msa1184910:five_prime_UTR 15.0%
!!! TTTCTATTTCTTTTGAAAAA+TGG - chr8_1:21109143-21109162 None:intergenic 15.0%
!! AAAAAAAGCAAAATTTATGA+TGG + chr8_1:21110014-21110033 Msa1184910:intron 15.0%
!!! AATTTTGATTTGATAAGTGA+TGG + chr8_1:21108421-21108440 Msa1184910:five_prime_UTR 20.0%
!!! TTTTTGGGTTTTATATTTTG+GGG + chr8_1:21108506-21108525 Msa1184910:five_prime_UTR 20.0%
!!! TTTTAGTTAAATTCAGATTC+TGG + chr8_1:21108589-21108608 Msa1184910:five_prime_UTR 20.0%
!! TTTAGTTAAATTCAGATTCT+GGG + chr8_1:21108590-21108609 Msa1184910:five_prime_UTR 20.0%
!!! TTTTAGTTGAATTGATATTC+TGG + chr8_1:21108673-21108692 Msa1184910:five_prime_UTR 20.0%
!! TTTAGTTGAATTGATATTCT+GGG + chr8_1:21108674-21108693 Msa1184910:five_prime_UTR 20.0%
!! CTCCAAAATATAAAACTATA+AGG - chr8_1:21108709-21108728 None:intergenic 20.0%
!! ATGATAAACTCATAATTCAA+CGG - chr8_1:21108974-21108993 None:intergenic 20.0%
!! TTGAATTATGAGTTTATCAT+GGG + chr8_1:21108974-21108993 Msa1184910:CDS 20.0%
!! CTTGAACACATAATATTAAT+GGG - chr8_1:21109526-21109545 None:intergenic 20.0%
!! TCTTGAACACATAATATTAA+TGG - chr8_1:21109527-21109546 None:intergenic 20.0%
!!! ATGAAAGCATAGTAATTAAT+GGG + chr8_1:21109564-21109583 Msa1184910:intron 20.0%
!! TACATACTCTTTATAAAATG+TGG - chr8_1:21110382-21110401 None:intergenic 20.0%
!!! TAACTTTAAAGCGAAAAATA+AGG - chr8_1:21110888-21110907 None:intergenic 20.0%
!! GTTACACTTTCATTTATAAT+TGG - chr8_1:21111768-21111787 None:intergenic 20.0%
!!! TTTTAGTTGAATTCAGATTC+TGG + chr8_1:21108390-21108409 Msa1184910:five_prime_UTR 25.0%
! TTTAGTTGAATTCAGATTCT+GGG + chr8_1:21108391-21108410 Msa1184910:five_prime_UTR 25.0%
!! TTTTTGTTGAATTCAGATTC+TGG + chr8_1:21108473-21108492 Msa1184910:five_prime_UTR 25.0%
!! TTTTGTTGAATTCAGATTCT+GGG + chr8_1:21108474-21108493 Msa1184910:five_prime_UTR 25.0%
! GTGATGAATTCATTAAATTG+AGG + chr8_1:21108637-21108656 Msa1184910:five_prime_UTR 25.0%
!!! TTAACTAGTTTAGTTTGGTT+TGG + chr8_1:21108730-21108749 Msa1184910:five_prime_UTR 25.0%
! GTTGAATTATGAGTTTATCA+TGG + chr8_1:21108973-21108992 Msa1184910:CDS 25.0%
! TGAATTATGAGTTTATCATG+GGG + chr8_1:21108975-21108994 Msa1184910:CDS 25.0%
! AACCCTTATACAACAAAAAT+CGG - chr8_1:21109357-21109376 None:intergenic 25.0%
!!! AATGGGTTTTTATTTGAGTT+TGG - chr8_1:21109509-21109528 None:intergenic 25.0%
!! CATGAAAGCATAGTAATTAA+TGG + chr8_1:21109563-21109582 Msa1184910:intron 25.0%
! ATTTGTCACAACATTTACTT+TGG + chr8_1:21109649-21109668 Msa1184910:intron 25.0%
!!! ATGCTAATGCAATAGTTTTT+TGG - chr8_1:21110322-21110341 None:intergenic 25.0%
!!! ATTTGCTATCTTTTTAGTCA+TGG + chr8_1:21110520-21110539 Msa1184910:intron 25.0%
! AGAAAAAGCTACATGTTTAA+AGG - chr8_1:21110696-21110715 None:intergenic 25.0%
! AAGCGAAAAATAAGGATTAT+AGG - chr8_1:21110880-21110899 None:intergenic 25.0%
! TTGCTTATCTTCATCAAATT+TGG + chr8_1:21111002-21111021 Msa1184910:CDS 25.0%
!!! TTTTTGTGGGCTATATTTTA+AGG - chr8_1:21111564-21111583 None:intergenic 25.0%
AAAGCTAGTTGTGATGAAAT+GGG - chr8_1:21108313-21108332 None:intergenic 30.0%
AAAAGCTAGTTGTGATGAAA+TGG - chr8_1:21108314-21108333 None:intergenic 30.0%
!!! TTCATCACAACTAGCTTTTT+AGG + chr8_1:21108315-21108334 Msa1184910:five_prime_UTR 30.0%
!!! TAGCTTTTTAGGTTTGACAT+TGG + chr8_1:21108326-21108345 Msa1184910:five_prime_UTR 30.0%
!!! AGCTTTTTAGGTTTGACATT+GGG + chr8_1:21108327-21108346 Msa1184910:five_prime_UTR 30.0%
! ACACAATTGGTTCAAAATTC+AGG + chr8_1:21108354-21108373 Msa1184910:five_prime_UTR 30.0%
!! GTGATGGATTTGATAAATTG+AGG + chr8_1:21108437-21108456 Msa1184910:five_prime_UTR 30.0%
! TTCTGGGTCATTGAAATTTT+TGG + chr8_1:21108490-21108509 Msa1184910:five_prime_UTR 30.0%
! TCTGGGTCATTGAAATTTTT+GGG + chr8_1:21108491-21108510 Msa1184910:five_prime_UTR 30.0%
!! ATTTTGGGGAAAAAGTAGTT+TGG + chr8_1:21108520-21108539 Msa1184910:five_prime_UTR 30.0%
! GGAGATTAACTAGTTTAGTT+TGG + chr8_1:21108725-21108744 Msa1184910:five_prime_UTR 30.0%
! GTTTTGTGTGTGTTGAATAT+GGG + chr8_1:21108752-21108771 Msa1184910:exon 30.0%
!!! TTCTTTTGCCGATTTTGTTT+GGG + chr8_1:21108937-21108956 Msa1184910:CDS 30.0%
CTTTGATTCCCAAACAAAAT+CGG - chr8_1:21108948-21108967 None:intergenic 30.0%
AGGATCCAAACTGATTATTT+GGG + chr8_1:21109214-21109233 Msa1184910:intron 30.0%
!! AACCCGATTTTTGTTGTATA+AGG + chr8_1:21109351-21109370 Msa1184910:intron 30.0%
!! ACCCGATTTTTGTTGTATAA+GGG + chr8_1:21109352-21109371 Msa1184910:intron 30.0%
ACCCTTATACAACAAAAATC+GGG - chr8_1:21109356-21109375 None:intergenic 30.0%
ATTAATGGGAAGAAAAGTAG+AGG + chr8_1:21109578-21109597 Msa1184910:intron 30.0%
! CACAACATTTACTTTGGTTT+AGG + chr8_1:21109655-21109674 Msa1184910:intron 30.0%
! TTACTTTGGTTTAGGAAATC+TGG + chr8_1:21109663-21109682 Msa1184910:intron 30.0%
!!! TGTATTTTTTCCCACTGTAT+TGG + chr8_1:21109954-21109973 Msa1184910:intron 30.0%
!!! GTATTTTTTCCCACTGTATT+GGG + chr8_1:21109955-21109974 Msa1184910:intron 30.0%
TTTGACAACTCTATGAATAG+AGG + chr8_1:21110088-21110107 Msa1184910:intron 30.0%
TTGACAACTCTATGAATAGA+GGG + chr8_1:21110089-21110108 Msa1184910:intron 30.0%
GGTATTGTCATAAAAGCAAA+AGG - chr8_1:21110153-21110172 None:intergenic 30.0%
!!! GCAATAGTTTTTTGGCTTTA+TGG - chr8_1:21110314-21110333 None:intergenic 30.0%
GCATACAAAAGATTCAAGAT+TGG + chr8_1:21110338-21110357 Msa1184910:intron 30.0%
! ACCAAATCTTTTGTATGTCT+TGG + chr8_1:21110407-21110426 Msa1184910:intron 30.0%
! CCAAATCTTTTGTATGTCTT+GGG + chr8_1:21110408-21110427 Msa1184910:intron 30.0%
TTGACGCATAAGTATTTACA+AGG - chr8_1:21110498-21110517 None:intergenic 30.0%
!! CTCATTTTTCCCAATTTACT+TGG + chr8_1:21110560-21110579 Msa1184910:intron 30.0%
TTGAAGTGAAAACACATATC+TGG + chr8_1:21110645-21110664 Msa1184910:intron 30.0%
ATCAAGTATAAACACACATG+TGG + chr8_1:21110834-21110853 Msa1184910:intron 30.0%
CTTATCTTCATCAAATTTGG+TGG + chr8_1:21111005-21111024 Msa1184910:CDS 30.0%
! ATTGATTTCCAATTTCCAGT+AGG + chr8_1:21111046-21111065 Msa1184910:CDS 30.0%
TTGATTTCCAATTTCCAGTA+GGG + chr8_1:21111047-21111066 Msa1184910:CDS 30.0%
!!! GAAGTGTAAATTGTTTTTGC+AGG + chr8_1:21111397-21111416 Msa1184910:exon 30.0%
!!! TGTAAATTGTTTTTGCAGGT+AGG + chr8_1:21111401-21111420 Msa1184910:exon 30.0%
!! TGGTGGATTTACTAAAATCA+CGG - chr8_1:21111481-21111500 None:intergenic 30.0%
!!! TTTTAAGGTATTACTTCCAC+TGG - chr8_1:21111549-21111568 None:intergenic 30.0%
AGAAACCAAACATCTATCTT+GGG - chr8_1:21111591-21111610 None:intergenic 30.0%
AAGAAACCAAACATCTATCT+TGG - chr8_1:21111592-21111611 None:intergenic 30.0%
ATAAATACACAAGTCACACA+TGG - chr8_1:21111642-21111661 None:intergenic 30.0%
TTGCATGAAGTGTAACATTA+TGG + chr8_1:21111742-21111761 Msa1184910:three_prime_UTR 30.0%
CTTGAAGAATCCAATTCAAC+CGG + chr8_1:21108241-21108260 Msa1184910:five_prime_UTR 35.0%
AATCCAATTCAACCGGAAAA+CGG + chr8_1:21108248-21108267 Msa1184910:five_prime_UTR 35.0%
AGTTGTGATGAAATGGGAAT+TGG - chr8_1:21108307-21108326 None:intergenic 35.0%
!!! TTTTTAGGTTTGACATTGGG+AGG + chr8_1:21108330-21108349 Msa1184910:five_prime_UTR 35.0%
!! GGTTTTGTGTGTGTTGAATA+TGG + chr8_1:21108751-21108770 Msa1184910:exon 35.0%
! TTTTCCTCATGTGTATGTGA+TGG + chr8_1:21108782-21108801 Msa1184910:CDS 35.0%
TTTCCTCATGTGTATGTGAT+GGG + chr8_1:21108783-21108802 Msa1184910:CDS 35.0%
TAAGCTAGCACGATTGAATA+GGG + chr8_1:21108901-21108920 Msa1184910:CDS 35.0%
!!! CTTCTTTTGCCGATTTTGTT+TGG + chr8_1:21108936-21108955 Msa1184910:CDS 35.0%
AAGCCTAGCTTATTTGACAA+TGG + chr8_1:21109070-21109089 Msa1184910:CDS 35.0%
GTTCCATTGTCAAATAAGCT+AGG - chr8_1:21109076-21109095 None:intergenic 35.0%
CTTATTTGACAATGGAACCA+AGG + chr8_1:21109078-21109097 Msa1184910:CDS 35.0%
GAGGATCCAAACTGATTATT+TGG + chr8_1:21109213-21109232 Msa1184910:intron 35.0%
CAAGTCCCAAATAATCAGTT+TGG - chr8_1:21109222-21109241 None:intergenic 35.0%
! CAAACTGATTATTTGGGACT+TGG + chr8_1:21109220-21109239 Msa1184910:intron 35.0%
! TTTTCTCTCACTCGATCTAA+CGG + chr8_1:21109287-21109306 Msa1184910:intron 35.0%
ATATCCAACTTTAGCTGCAA+TGG + chr8_1:21109453-21109472 Msa1184910:intron 35.0%
CATGTCATGACTTATTAGAG+TGG - chr8_1:21109608-21109627 None:intergenic 35.0%
! CAATTTCTTCCAAAGCGTTA+AGG + chr8_1:21109717-21109736 Msa1184910:CDS 35.0%
! TTCCAAAGCGTTAAGGATTA+CGG + chr8_1:21109724-21109743 Msa1184910:CDS 35.0%
ACATTTCGACTGAAGAATCA+AGG + chr8_1:21109774-21109793 Msa1184910:CDS 35.0%
AAAAATGAGCCCAATACAGT+GGG - chr8_1:21109967-21109986 None:intergenic 35.0%
AAAAAATGAGCCCAATACAG+TGG - chr8_1:21109968-21109987 None:intergenic 35.0%
!!! ACTGTATTGGGCTCATTTTT+TGG + chr8_1:21109967-21109986 Msa1184910:intron 35.0%
TGACAACTCTATGAATAGAG+GGG + chr8_1:21110090-21110109 Msa1184910:intron 35.0%
ACAATACCCCTATGTTCATA+GGG + chr8_1:21110165-21110184 Msa1184910:intron 35.0%
TTGACAACCCTATGAACATA+GGG - chr8_1:21110175-21110194 None:intergenic 35.0%
TTTGACAACCCTATGAACAT+AGG - chr8_1:21110176-21110195 None:intergenic 35.0%
CCCAAGACATACAAAAGATT+TGG - chr8_1:21110411-21110430 None:intergenic 35.0%
TCTTGGGTCAAATCTAAACT+TGG + chr8_1:21110424-21110443 Msa1184910:intron 35.0%
ATCTAAACTTGGTCTAGACT+TGG + chr8_1:21110435-21110454 Msa1184910:intron 35.0%
AACACATATCTGGTTACTGT+TGG + chr8_1:21110655-21110674 Msa1184910:intron 35.0%
! ACACACATGTGGACAATTTT+AGG + chr8_1:21110845-21110864 Msa1184910:intron 35.0%
! ACTATGAAAGCGCATGAATA+TGG + chr8_1:21110925-21110944 Msa1184910:intron 35.0%
GATGAAGATAAGCAACTGAA+TGG - chr8_1:21110997-21111016 None:intergenic 35.0%
TGGATTGTCCAAATGAGTAT+GGG - chr8_1:21111218-21111237 None:intergenic 35.0%
ATACTCATTTGGACAATCCA+GGG + chr8_1:21111218-21111237 Msa1184910:CDS 35.0%
TAGAGACAAAGTTTCCTACA+TGG - chr8_1:21111258-21111277 None:intergenic 35.0%
AATAGATTGCACTCATACCA+AGG + chr8_1:21111321-21111340 Msa1184910:CDS 35.0%
ATAGATTGCACTCATACCAA+GGG + chr8_1:21111322-21111341 Msa1184910:CDS 35.0%
GCTACTATTGCATATAAGCA+CGG - chr8_1:21111365-21111384 None:intergenic 35.0%
TTAGTGCATGTTTGGTATCA+TGG + chr8_1:21111448-21111467 Msa1184910:three_prime_UTR 35.0%
TAAGTGCGTGTTTGATATCA+TGG - chr8_1:21111501-21111520 None:intergenic 35.0%
! AAACACGCACTTAGCAATTT+TGG + chr8_1:21111508-21111527 Msa1184910:three_prime_UTR 35.0%
!! TTAGCAATTTTGGTCGCATA+GGG + chr8_1:21111518-21111537 Msa1184910:three_prime_UTR 35.0%
! TATCTTGGGAAGCTTTTTGT+GGG - chr8_1:21111577-21111596 None:intergenic 35.0%
TGTTGTGCTTTCTCAAAGAA+TGG + chr8_1:21111687-21111706 Msa1184910:three_prime_UTR 35.0%
TGCTTTCTCAAAGAATGGAA+TGG + chr8_1:21111692-21111711 Msa1184910:three_prime_UTR 35.0%
TTCTCAAAGAATGGAATGGT+TGG + chr8_1:21111696-21111715 Msa1184910:three_prime_UTR 35.0%
GGGAATTGGCATGAATTTCT+GGG - chr8_1:21108293-21108312 None:intergenic 40.0%
TGGGAATTGGCATGAATTTC+TGG - chr8_1:21108294-21108313 None:intergenic 40.0%
GGGGAAAAAGTAGTTTGGTT+TGG + chr8_1:21108525-21108544 Msa1184910:five_prime_UTR 40.0%
AAATTCAGATTCTGGGTCTG+TGG + chr8_1:21108597-21108616 Msa1184910:five_prime_UTR 40.0%
TTCCTCATGTGTATGTGATG+GGG + chr8_1:21108784-21108803 Msa1184910:CDS 40.0%
! ATGGGGATTGTAGTTCTATG+AGG + chr8_1:21108807-21108826 Msa1184910:CDS 40.0%
!! GGCATTGGTGTTGATGTATT+TGG + chr8_1:21108862-21108881 Msa1184910:CDS 40.0%
GTTGATGTATTTGGATCCAC+CGG + chr8_1:21108871-21108890 Msa1184910:CDS 40.0%
! CGTGCTAGCTTACATATATC+CGG - chr8_1:21108893-21108912 None:intergenic 40.0%
GTAAGCTAGCACGATTGAAT+AGG + chr8_1:21108900-21108919 Msa1184910:CDS 40.0%
GTTTATCATGGGGAAAGCTT+TGG + chr8_1:21108985-21109004 Msa1184910:CDS 40.0%
TTTGACAATGGAACCAAGGT+AGG + chr8_1:21109082-21109101 Msa1184910:intron 40.0%
TGCATTGTGCAACAGCTATA+GGG - chr8_1:21109184-21109203 None:intergenic 40.0%
TTGCATTGTGCAACAGCTAT+AGG - chr8_1:21109185-21109204 None:intergenic 40.0%
TCAGTTTGGATCCTCTATAG+TGG - chr8_1:21109208-21109227 None:intergenic 40.0%
CTACACAGTGCAACAATTGT+GGG - chr8_1:21109315-21109334 None:intergenic 40.0%
AAAGCCATTGCAGCTAAAGT+TGG - chr8_1:21109460-21109479 None:intergenic 40.0%
ATCTGGCTAGATAAGAAGAC+CGG + chr8_1:21109680-21109699 Msa1184910:CDS 40.0%
! TCCAAAGCGTTAAGGATTAC+GGG + chr8_1:21109725-21109744 Msa1184910:CDS 40.0%
GGATAGATGATCGCAGATAT+TGG + chr8_1:21109747-21109766 Msa1184910:CDS 40.0%
GAATCAAGGTGAGATTACTG+CGG + chr8_1:21109788-21109807 Msa1184910:intron 40.0%
AATCAAGGTGAGATTACTGC+GGG + chr8_1:21109789-21109808 Msa1184910:intron 40.0%
GACAATACCCCTATGTTCAT+AGG + chr8_1:21110164-21110183 Msa1184910:intron 40.0%
TGACAACCCTATGAACATAG+GGG - chr8_1:21110174-21110193 None:intergenic 40.0%
! AACTTGGTCTAGACTTGGTT+TGG + chr8_1:21110440-21110459 Msa1184910:intron 40.0%
!! TCTTTTTAGTCATGGTCTCG+TGG + chr8_1:21110528-21110547 Msa1184910:intron 40.0%
GAACACGCACCAAGTAAATT+GGG - chr8_1:21110572-21110591 None:intergenic 40.0%
!! CAATTTACTTGGTGCGTGTT+CGG + chr8_1:21110571-21110590 Msa1184910:intron 40.0%
! ATGAAAGCGCATGAATATGG+TGG + chr8_1:21110928-21110947 Msa1184910:intron 40.0%
!! CTCTGCTTTTGTGTGTGAAT+AGG + chr8_1:21110969-21110988 Msa1184910:intron 40.0%
! ATTTGGTGGCTTGAAGTTGA+AGG + chr8_1:21111019-21111038 Msa1184910:CDS 40.0%
TGTATGTCCCTACTGGAAAT+TGG - chr8_1:21111057-21111076 None:intergenic 40.0%
CTGGATTGTCCAAATGAGTA+TGG - chr8_1:21111219-21111238 None:intergenic 40.0%
CATACTCATTTGGACAATCC+AGG + chr8_1:21111217-21111236 Msa1184910:CDS 40.0%
CAAAGTTTCCTACATGGTAG+AGG - chr8_1:21111252-21111271 None:intergenic 40.0%
AACATGCACTAAGTCAACTC+AGG - chr8_1:21111440-21111459 None:intergenic 40.0%
! GAGTTGACTTAGTGCATGTT+TGG + chr8_1:21111440-21111459 Msa1184910:three_prime_UTR 40.0%
!! CTTAGCAATTTTGGTCGCAT+AGG + chr8_1:21111517-21111536 Msa1184910:three_prime_UTR 40.0%
!! TAGCAATTTTGGTCGCATAG+GGG + chr8_1:21111519-21111538 Msa1184910:three_prime_UTR 40.0%
! CTATCTTGGGAAGCTTTTTG+TGG - chr8_1:21111578-21111597 None:intergenic 40.0%
AGCTTCCCAAGATAGATGTT+TGG + chr8_1:21111583-21111602 Msa1184910:three_prime_UTR 40.0%
GTGTACTCTATTACTTCAGC+TGG + chr8_1:21111718-21111737 Msa1184910:three_prime_UTR 40.0%
! GACATTGGGAGGTACACAAT+TGG + chr8_1:21108341-21108360 Msa1184910:five_prime_UTR 45.0%
ATCCCCATCACATACACATG+AGG - chr8_1:21108789-21108808 None:intergenic 45.0%
! TCATGTGTATGTGATGGGGA+TGG + chr8_1:21108788-21108807 Msa1184910:CDS 45.0%
! CATGTGTATGTGATGGGGAT+GGG + chr8_1:21108789-21108808 Msa1184910:CDS 45.0%
! ATGTGTATGTGATGGGGATG+GGG + chr8_1:21108790-21108809 Msa1184910:CDS 45.0%
AGTTCTATGAGGCCAAAGCT+TGG + chr8_1:21108818-21108837 Msa1184910:CDS 45.0%
GTTCTATGAGGCCAAAGCTT+GGG + chr8_1:21108819-21108838 Msa1184910:CDS 45.0%
TTCTATGAGGCCAAAGCTTG+GGG + chr8_1:21108820-21108839 Msa1184910:CDS 45.0%
TCTGGTATATCCCCAAGCTT+TGG - chr8_1:21108833-21108852 None:intergenic 45.0%
GGATATACCAGAGAGTTGTG+TGG + chr8_1:21108841-21108860 Msa1184910:CDS 45.0%
! GCTAGCTTACATATATCCGG+TGG - chr8_1:21108890-21108909 None:intergenic 45.0%
! TATCATGGGGAAAGCTTTGG+AGG + chr8_1:21108988-21109007 Msa1184910:CDS 45.0%
GAGGATGATACTAGTAGCTC+TGG + chr8_1:21109007-21109026 Msa1184910:CDS 45.0%
!! AGTAGCTCTGGTGCTGAATT+AGG + chr8_1:21109019-21109038 Msa1184910:CDS 45.0%
!! GTAGCTCTGGTGCTGAATTA+GGG + chr8_1:21109020-21109039 Msa1184910:CDS 45.0%
! TGGTGCTGAATTAGGGAAGA+GGG + chr8_1:21109027-21109046 Msa1184910:CDS 45.0%
GGAACCAAGGTAGGTTATCT+TGG + chr8_1:21109091-21109110 Msa1184910:intron 45.0%
CGAACCAAGATAACCTACCT+TGG - chr8_1:21109098-21109117 None:intergenic 45.0%
GCATTGTGCAACAGCTATAG+GGG - chr8_1:21109183-21109202 None:intergenic 45.0%
GCACAATGCAACCACTATAG+AGG + chr8_1:21109194-21109213 Msa1184910:intron 45.0%
TTGGATCACCTGCAGCTTAT+TGG + chr8_1:21109239-21109258 Msa1184910:intron 45.0%
TGGATCACCTGCAGCTTATT+GGG + chr8_1:21109240-21109259 Msa1184910:intron 45.0%
GCTACACAGTGCAACAATTG+TGG - chr8_1:21109316-21109335 None:intergenic 45.0%
!!! GGGTTTTGAATCCTCTACAG+CGG + chr8_1:21109372-21109391 Msa1184910:intron 45.0%
AATTGCCATACAAACCCCAC+CGG - chr8_1:21109702-21109721 None:intergenic 45.0%
! CCAAAGCGTTAAGGATTACG+GGG + chr8_1:21109726-21109745 Msa1184910:CDS 45.0%
CACATTTGACCAAAGCCAGA+GGG + chr8_1:21110257-21110276 Msa1184910:intron 45.0%
! TGTATTAGACCCTCTGGCTT+TGG - chr8_1:21110269-21110288 None:intergenic 45.0%
CGACTTTGTATTAGACCCTC+TGG - chr8_1:21110275-21110294 None:intergenic 45.0%
CGAACACGCACCAAGTAAAT+TGG - chr8_1:21110573-21110592 None:intergenic 45.0%
! TTGGTGCGTGTTCGGTTTTA+CGG + chr8_1:21110579-21110598 Msa1184910:intron 45.0%
TCATGCGCTTTCATAGTGCA+TGG - chr8_1:21110922-21110941 None:intergenic 45.0%
TACACACTGTATGTCCCTAC+TGG - chr8_1:21111064-21111083 None:intergenic 45.0%
GTGTACTTCAGACTTCACCT+TGG + chr8_1:21111079-21111098 Msa1184910:CDS 45.0%
!! CAGGTTTTATATCCCAGCCA+TGG - chr8_1:21111153-21111172 None:intergenic 45.0%
TTTCAGCTGACGACTTCTGA+TGG + chr8_1:21111178-21111197 Msa1184910:CDS 45.0%
CGCTGTATCCCATACTCATT+TGG + chr8_1:21111207-21111226 Msa1184910:CDS 45.0%
GTGCGTGTTTGATATCATGG+TGG - chr8_1:21111498-21111517 None:intergenic 45.0%
!! AGCAATTTTGGTCGCATAGG+GGG + chr8_1:21111520-21111539 Msa1184910:three_prime_UTR 45.0%
!! ACGCCGTTTTCCGGTTGAAT+TGG - chr8_1:21108254-21108273 None:intergenic 50.0%
ACCAGAGAGTTGTGTGGCAT+TGG + chr8_1:21108847-21108866 Msa1184910:CDS 50.0%
ACCAATGCCACACAACTCTC+TGG - chr8_1:21108851-21108870 None:intergenic 50.0%
! CTGGTGCTGAATTAGGGAAG+AGG + chr8_1:21109026-21109045 Msa1184910:CDS 50.0%
GGATCACCTGCAGCTTATTG+GGG + chr8_1:21109241-21109260 Msa1184910:intron 50.0%
AACCATCCCCAATAAGCTGC+AGG - chr8_1:21109250-21109269 None:intergenic 50.0%
! TAGCTGCAATGGCTTTGCAG+AGG + chr8_1:21109464-21109483 Msa1184910:intron 50.0%
TGGCTAGATAAGAAGACCGG+TGG + chr8_1:21109683-21109702 Msa1184910:CDS 50.0%
GGCTAGATAAGAAGACCGGT+GGG + chr8_1:21109684-21109703 Msa1184910:CDS 50.0%
GCTAGATAAGAAGACCGGTG+GGG + chr8_1:21109685-21109704 Msa1184910:CDS 50.0%
CCCCGTAATCCTTAACGCTT+TGG - chr8_1:21109729-21109748 None:intergenic 50.0%
!! CCTCTGGCTTTGGTCAAATG+TGG - chr8_1:21110259-21110278 None:intergenic 50.0%
CCACATTTGACCAAAGCCAG+AGG + chr8_1:21110256-21110275 Msa1184910:intron 50.0%
! GCGCATGAATATGGTGGAAC+TGG + chr8_1:21110934-21110953 Msa1184910:intron 50.0%
ACTTCAGACTTCACCTTGGC+AGG + chr8_1:21111083-21111102 Msa1184910:CDS 50.0%
GCTCGGTCTTACAAACTCGT+CGG - chr8_1:21111126-21111145 None:intergenic 50.0%
TGTAAGACCGAGCACATCCA+TGG + chr8_1:21111133-21111152 Msa1184910:CDS 50.0%
GTCGTCAGCTGAAACTTTGC+AGG - chr8_1:21111172-21111191 None:intergenic 50.0%
ATTTGGACAATCCAGGGCAC+TGG + chr8_1:21111224-21111243 Msa1184910:CDS 50.0%
CACTGGATCCTCTACCATGT+AGG + chr8_1:21111241-21111260 Msa1184910:CDS 50.0%
GATTGCACTCATACCAAGGG+TGG + chr8_1:21111325-21111344 Msa1184910:CDS 50.0%
CACCTGCAGCTTATTGGGGA+TGG + chr8_1:21109245-21109264 Msa1184910:intron 55.0%
GAATCCTCTACAGCGGCTAC+AGG + chr8_1:21109379-21109398 Msa1184910:intron 55.0%
ATTGCCTGTAGCCGCTGTAG+AGG - chr8_1:21109386-21109405 None:intergenic 55.0%
GAAGACCGGTGGGGTTTGTA+TGG + chr8_1:21109694-21109713 Msa1184910:CDS 55.0%
GCTTCTTGGATGACCTGCCA+AGG - chr8_1:21111099-21111118 None:intergenic 55.0%
GGCAGGTCATCCAAGAAGCT+CGG + chr8_1:21111100-21111119 Msa1184910:CDS 55.0%
ATCCCAGCCATGGATGTGCT+CGG - chr8_1:21111143-21111162 None:intergenic 55.0%
GTCGACACACAAACCACCCT+TGG - chr8_1:21111341-21111360 None:intergenic 55.0%
AACTCGTCGGCCGAGCTTCT+TGG - chr8_1:21111113-21111132 None:intergenic 60.0%
AGACCGAGCACATCCATGGC+TGG + chr8_1:21111137-21111156 Msa1184910:CDS 60.0%
GACCGAGCACATCCATGGCT+GGG + chr8_1:21111138-21111157 Msa1184910:CDS 60.0%
TGGTAGAGGATCCAGTGCCC+TGG - chr8_1:21111238-21111257 None:intergenic 60.0%
!! CGCGTGCGTACGCCGTTTTC+CGG - chr8_1:21108263-21108282 None:intergenic 65.0%
GTCGCATAGGGGGAGTCCAG+TGG + chr8_1:21111530-21111549 Msa1184910:three_prime_UTR 65.0%
Chromosome Type Strat End Strand Name
chr8_1 gene 21108110 21111788 21108110 ID=Msa1184910;Name=Msa1184910
chr8_1 mRNA 21108110 21111788 21108110 ID=Msa1184910-mRNA-1;Parent=Msa1184910;Name=Msa1184910-mRNA-1;_AED=0.02;_eAED=0.02;_QI=660|1|1|1|1|1|3|383|287
chr8_1 exon 21108110 21109099 21108110 ID=Msa1184910-mRNA-1:exon:8025;Parent=Msa1184910-mRNA-1
chr8_1 exon 21109677 21109795 21109677 ID=Msa1184910-mRNA-1:exon:8026;Parent=Msa1184910-mRNA-1
chr8_1 exon 21110991 21111788 21110991 ID=Msa1184910-mRNA-1:exon:8027;Parent=Msa1184910-mRNA-1
chr8_1 five_prime_UTR 21108110 21108769 21108110 ID=Msa1184910-mRNA-1:five_prime_utr;Parent=Msa1184910-mRNA-1
chr8_1 CDS 21108770 21109099 21108770 ID=Msa1184910-mRNA-1:cds;Parent=Msa1184910-mRNA-1
chr8_1 CDS 21109677 21109795 21109677 ID=Msa1184910-mRNA-1:cds;Parent=Msa1184910-mRNA-1
chr8_1 CDS 21110991 21111405 21110991 ID=Msa1184910-mRNA-1:cds;Parent=Msa1184910-mRNA-1
chr8_1 three_prime_UTR 21111406 21111788 21111406 ID=Msa1184910-mRNA-1:three_prime_utr;Parent=Msa1184910-mRNA-1
Gene Sequence

>Msa1184910

ATGGGTGCTAATTTTTCCTCATGTGTATGTGATGGGGATGGGGATTGTAGTTCTATGAGGCCAAAGCTTGGGGATATACCAGAGAGTTGTGTGGCATTGGTGTTGATGTATTTGGATCCACCGGATATATGTAAGCTAGCACGATTGAATAGGGTGTTTCGTGATGCTTCTTTTGCCGATTTTGTTTGGGAATCAAAGTTGCCGTTGAATTATGAGTTTATCATGGGGAAAGCTTTGGAGGATGATACTAGTAGCTCTGGTGCTGAATTAGGGAAGAGGGATATTTATGCTAGACTTTGTAAGCCTAGCTTATTTGACAATGGAACCAAGGAAATCTGGCTAGATAAGAAGACCGGTGGGGTTTGTATGGCAATTTCTTCCAAAGCGTTAAGGATTACGGGGATAGATGATCGCAGATATTGGAATCACATTTCGACTGAAGAATCAAGGTTCCATTCAGTTGCTTATCTTCATCAAATTTGGTGGCTTGAAGTTGAAGGAGATATTGATTTCCAATTTCCAGTAGGGACATACAGTGTGTACTTCAGACTTCACCTTGGCAGGTCATCCAAGAAGCTCGGCCGACGAGTTTGTAAGACCGAGCACATCCATGGCTGGGATATAAAACCTGCAAAGTTTCAGCTGACGACTTCTGATGGTCAAATCGCTGTATCCCATACTCATTTGGACAATCCAGGGCACTGGATCCTCTACCATGTAGGAAACTTTGTCTCTAAGAATTCTAATGATTTGATGAAGTTCAAGTTTTCATTGTCTCAAATAGATTGCACTCATACCAAGGGTGGTTTGTGTGTCGACTCCGTGCTTATATGCAATAGTAGCGATGTAAAAAAAGAAGTGTAA
Protein sequence

>Msa1184910

MGANFSSCVCDGDGDCSSMRPKLGDIPESCVALVLMYLDPPDICKLARLNRVFRDASFADFVWESKLPLNYEFIMGKALEDDTSSSGAELGKRDIYARLCKPSLFDNGTKEIWLDKKTGGVCMAISSKALRITGIDDRRYWNHISTEESRFHSVAYLHQIWWLEVEGDIDFQFPVGTYSVYFRLHLGRSSKKLGRRVCKTEHIHGWDIKPAKFQLTTSDGQIAVSHTHLDNPGHWILYHVGNFVSKNSNDLMKFKFSLSQIDCTHTKGGLCVDSVLICNSSDVKKEV*