Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1292570 | XP_024628813.2 | 96.045 | 986 | 39 | 0 | 1 | 986 | 1 | 986 | 0.0 | 1917 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1292570 | sp|Q94CG5|KIP1_PETIN | 42.311 | 1021 | 492 | 25 | 1 | 979 | 1 | 966 | 0.0 | 683 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1292570 | A0A072U2T5 | 96.045 | 986 | 39 | 0 | 1 | 986 | 1 | 986 | 0.0 | 1917 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0688270 | Msa1292570 | 0.803092 | 4.111913e-49 | -8.615850e-47 |
| Msa0694370 | Msa1292570 | 0.800102 | 1.686627e-48 | -8.615850e-47 |
| Msa0729800 | Msa1292570 | 0.802650 | 5.073325e-49 | -8.615850e-47 |
| Msa0766630 | Msa1292570 | 0.839687 | 1.364950e-57 | -8.615850e-47 |
| Msa0794700 | Msa1292570 | 0.821454 | 4.003200e-53 | -8.615850e-47 |
| Msa0810220 | Msa1292570 | 0.810765 | 9.798023e-51 | -8.615850e-47 |
| Msa0811080 | Msa1292570 | 0.805675 | 1.190327e-49 | -8.615850e-47 |
| Msa0817460 | Msa1292570 | 0.814398 | 1.571991e-51 | -8.615850e-47 |
| Msa0131770 | Msa1292570 | 0.818529 | 1.869383e-52 | -8.615850e-47 |
| Msa0142220 | Msa1292570 | 0.832431 | 9.492775e-56 | -8.615850e-47 |
| Msa0233300 | Msa1292570 | 0.805958 | 1.038150e-49 | -8.615850e-47 |
| Msa1251910 | Msa1292570 | 0.846218 | 2.492867e-59 | -8.615850e-47 |
| Msa1253000 | Msa1292570 | 0.800733 | 1.254739e-48 | -8.615850e-47 |
| Msa1292570 | Msa1309030 | 0.802778 | 4.773675e-49 | -8.615850e-47 |
| Msa1292570 | Msa1353470 | 0.800088 | 1.697963e-48 | -8.615850e-47 |
| Msa1292570 | Msa1451570 | 0.831457 | 1.651229e-55 | -8.615850e-47 |
| Msa0371730 | Msa1292570 | 0.812783 | 3.563234e-51 | -8.615850e-47 |
| Msa0407750 | Msa1292570 | 0.819992 | 8.677650e-53 | -8.615850e-47 |
| Msa0430420 | Msa1292570 | 0.810291 | 1.240082e-50 | -8.615850e-47 |
| Msa0466120 | Msa1292570 | 0.810556 | 1.086823e-50 | -8.615850e-47 |
| Msa1019150 | Msa1292570 | 0.810094 | 1.367341e-50 | -8.615850e-47 |
| Msa1023950 | Msa1292570 | 0.810803 | 9.611459e-51 | -8.615850e-47 |
| Msa1043130 | Msa1292570 | -0.803980 | 2.690477e-49 | -8.615850e-47 |
| Msa0290870 | Msa1292570 | 0.815508 | 8.920387e-52 | -8.615850e-47 |
| Msa1147740 | Msa1292570 | 0.813157 | 2.950393e-51 | -8.615850e-47 |
| Msa1198400 | Msa1292570 | 0.987110 | 4.310563e-169 | -8.615850e-47 |
| Msa0600700 | Msa1292570 | 0.825773 | 3.903401e-54 | -8.615850e-47 |
| Msa0844490 | Msa1292570 | 0.813395 | 2.615332e-51 | -8.615850e-47 |
| Msa0927310 | Msa1292570 | 0.801133 | 1.039481e-48 | -8.615850e-47 |
| Msa0933100 | Msa1292570 | 0.801262 | 9.781689e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1292570 | MtrunA17_Chr8g0367521 | 96.045 | 986 | 39 | 0 | 1 | 986 | 1 | 986 | 0.0 | 1917 |
| Msa1292570 | MtrunA17_Chr5g0412211 | 52.718 | 1159 | 360 | 21 | 1 | 986 | 1 | 1144 | 0.0 | 1048 |
| Msa1292570 | MtrunA17_Chr3g0132861 | 43.048 | 525 | 262 | 13 | 21 | 528 | 16 | 520 | 3.96e-109 | 361 |
| Msa1292570 | MtrunA17_Chr5g0427501 | 39.410 | 373 | 165 | 10 | 666 | 979 | 590 | 960 | 2.18e-65 | 238 |
| Msa1292570 | MtrunA17_Chr1g0204981 | 48.485 | 132 | 65 | 1 | 1 | 129 | 4 | 135 | 2.58e-36 | 149 |
| Msa1292570 | MtrunA17_Chr1g0185241 | 52.991 | 117 | 49 | 1 | 10 | 120 | 15 | 131 | 5.47e-36 | 148 |
| Msa1292570 | MtrunA17_Chr7g0260161 | 48.062 | 129 | 56 | 1 | 10 | 138 | 13 | 130 | 3.22e-34 | 142 |
| Msa1292570 | MtrunA17_Chr5g0394641 | 30.366 | 382 | 194 | 9 | 10 | 362 | 13 | 351 | 8.65e-34 | 141 |
| Msa1292570 | MtrunA17_Chr5g0432781 | 47.154 | 123 | 55 | 3 | 9 | 131 | 20 | 132 | 8.28e-30 | 126 |
| Msa1292570 | MtrunA17_Chr7g0268631 | 47.826 | 92 | 45 | 2 | 11 | 99 | 53 | 144 | 2.13e-22 | 100 |
| Msa1292570 | MtrunA17_Chr1g0196081 | 34.211 | 114 | 71 | 1 | 2 | 111 | 8 | 121 | 2.28e-18 | 89.7 |
| Msa1292570 | MtrunA17_Chr3g0107891 | 47.312 | 93 | 44 | 2 | 33 | 123 | 15 | 104 | 1.14e-17 | 87.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1292570 | AT2G22560.1 | 57.701 | 461 | 182 | 6 | 1 | 457 | 1 | 452 | 1.20e-161 | 500 |
| Msa1292570 | AT5G10500.1 | 47.468 | 474 | 217 | 7 | 1 | 469 | 1 | 447 | 4.53e-131 | 417 |
| Msa1292570 | AT5G10500.1 | 42.994 | 314 | 141 | 6 | 666 | 979 | 558 | 833 | 3.19e-56 | 210 |
| Msa1292570 | AT1G09720.1 | 45.378 | 476 | 223 | 7 | 1 | 468 | 1 | 447 | 2.98e-117 | 382 |
| Msa1292570 | AT1G09720.1 | 40.000 | 370 | 170 | 9 | 658 | 980 | 537 | 901 | 1.01e-65 | 239 |
| Msa1292570 | AT1G58215.1 | 39.609 | 409 | 182 | 8 | 637 | 980 | 514 | 922 | 2.54e-68 | 247 |
| Msa1292570 | AT3G22790.1 | 30.237 | 506 | 274 | 17 | 1 | 467 | 4 | 469 | 6.91e-43 | 171 |
| Msa1292570 | AT3G22790.3 | 30.237 | 506 | 274 | 17 | 1 | 467 | 4 | 469 | 6.91e-43 | 171 |
| Msa1292570 | AT3G22790.2 | 30.237 | 506 | 274 | 17 | 1 | 467 | 4 | 469 | 6.91e-43 | 171 |
| Msa1292570 | AT4G14760.4 | 29.259 | 499 | 283 | 19 | 3 | 467 | 6 | 468 | 1.56e-35 | 147 |
| Msa1292570 | AT4G14760.2 | 29.259 | 499 | 283 | 19 | 3 | 467 | 6 | 468 | 1.56e-35 | 147 |
| Msa1292570 | AT4G14760.3 | 29.259 | 499 | 283 | 19 | 3 | 467 | 6 | 468 | 1.56e-35 | 147 |
| Msa1292570 | AT4G14760.1 | 29.259 | 499 | 283 | 19 | 3 | 467 | 6 | 468 | 1.56e-35 | 147 |
| Msa1292570 | AT1G03080.3 | 38.764 | 178 | 98 | 2 | 7 | 178 | 9 | 181 | 8.82e-35 | 145 |
| Msa1292570 | AT1G03080.1 | 38.764 | 178 | 98 | 2 | 7 | 178 | 9 | 181 | 8.82e-35 | 145 |
| Msa1292570 | AT1G03080.2 | 38.764 | 178 | 98 | 2 | 7 | 178 | 9 | 181 | 8.82e-35 | 145 |
| Msa1292570 | AT4G02710.1 | 32.476 | 311 | 175 | 10 | 5 | 289 | 5 | 306 | 1.82e-32 | 137 |
| Msa1292570 | AT2G30500.2 | 55.682 | 88 | 38 | 1 | 9 | 96 | 20 | 106 | 4.32e-26 | 114 |
| Msa1292570 | AT2G30500.1 | 55.682 | 88 | 38 | 1 | 9 | 96 | 20 | 106 | 4.32e-26 | 114 |
| Msa1292570 | AT2G30500.3 | 55.682 | 88 | 38 | 1 | 9 | 96 | 19 | 105 | 4.77e-26 | 114 |
| Msa1292570 | AT5G58320.1 | 54.217 | 83 | 38 | 0 | 12 | 94 | 23 | 105 | 1.86e-24 | 109 |
| Msa1292570 | AT5G58320.4 | 54.217 | 83 | 38 | 0 | 12 | 94 | 23 | 105 | 1.86e-24 | 109 |
| Msa1292570 | AT5G58320.5 | 54.217 | 83 | 38 | 0 | 12 | 94 | 23 | 105 | 2.01e-24 | 109 |
| Msa1292570 | AT5G58320.2 | 54.217 | 83 | 38 | 0 | 12 | 94 | 23 | 105 | 2.01e-24 | 109 |
| Msa1292570 | AT2G47920.2 | 42.105 | 114 | 58 | 2 | 12 | 117 | 10 | 123 | 3.22e-22 | 97.1 |
| Msa1292570 | AT2G47920.1 | 42.105 | 114 | 58 | 2 | 12 | 117 | 10 | 123 | 3.22e-22 | 97.1 |
| Msa1292570 | AT1G03470.2 | 52.632 | 76 | 35 | 1 | 12 | 86 | 8 | 83 | 5.58e-20 | 91.7 |
| Msa1292570 | AT1G03470.3 | 52.632 | 76 | 35 | 1 | 12 | 86 | 8 | 83 | 5.58e-20 | 91.7 |
| Msa1292570 | AT1G03470.1 | 52.632 | 76 | 35 | 1 | 12 | 86 | 8 | 83 | 5.58e-20 | 91.7 |
| Msa1292570 | AT1G03470.4 | 52.632 | 76 | 35 | 1 | 12 | 86 | 8 | 83 | 5.58e-20 | 91.7 |
| Msa1292570 | AT5G58320.3 | 51.613 | 62 | 30 | 0 | 33 | 94 | 1 | 62 | 1.34e-13 | 74.7 |
| Msa1292570 | AT4G03153.1 | 36.458 | 96 | 55 | 3 | 12 | 101 | 7 | 102 | 2.90e-11 | 64.7 |
Find 136 sgRNAs with CRISPR-Local
Find 182 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATCATCATTCAATAAGATTT+TGG | 0.176661 | 8_3:+48897962 | None:intergenic |
| ATGCTGTTGTTATCTCTTCT+TGG | 0.181149 | 8_3:+48897058 | None:intergenic |
| TTTCTACTCAATCCTGATTT+AGG | 0.182892 | 8_3:+48899163 | None:intergenic |
| CCTTACTTCCCTTACTCTTT+TGG | 0.192513 | 8_3:+48898835 | None:intergenic |
| CCTCATTCGGTATCACCTTT+TGG | 0.233093 | 8_3:+48898081 | None:intergenic |
| AATCCTGATTTAGGAGCTTT+AGG | 0.233147 | 8_3:+48899172 | None:intergenic |
| ATAATTCCATTGCTAGATAT+TGG | 0.234388 | 8_3:-48899057 | Msa1292570:CDS |
| ACCGAGTTCGTCTTGCAAAT+TGG | 0.261286 | 8_3:+48898994 | None:intergenic |
| TCAACAGCAGAAGTTGATTC+TGG | 0.268774 | 8_3:+48897393 | None:intergenic |
| CCTCGTCTGGTATCACCTTT+TGG | 0.271862 | 8_3:+48898288 | None:intergenic |
| CCTCTAAGGTCATTTATCTT+TGG | 0.277004 | 8_3:-48896790 | Msa1292570:CDS |
| TTTACATCTCGTTTCGGCCT+CGG | 0.284477 | 8_3:+48898755 | None:intergenic |
| GCAAACGTGACAATGCTTCT+TGG | 0.304395 | 8_3:+48898900 | None:intergenic |
| TCCATATAAGGAACTCTATC+TGG | 0.306812 | 8_3:+48899364 | None:intergenic |
| AAATCTTTGAGTGGAGTCTT+TGG | 0.314691 | 8_3:+48899265 | None:intergenic |
| CTGCTGTTGAAGAGAAGTTT+AGG | 0.318730 | 8_3:-48897380 | Msa1292570:CDS |
| ACGTTTGGTTTCAATCCTTC+TGG | 0.318970 | 8_3:+48899298 | None:intergenic |
| CAATACGTCCATTTATTCAT+TGG | 0.319468 | 8_3:-48897931 | Msa1292570:CDS |
| CAATACGGCCATTGATTCAT+TGG | 0.327975 | 8_3:-48898114 | Msa1292570:CDS |
| AGTGGAGTCTTTGGAGCTTT+CGG | 0.333188 | 8_3:+48899274 | None:intergenic |
| CAATGAATCAATGGCCGTAT+TGG | 0.335865 | 8_3:+48898115 | None:intergenic |
| TGAAACGGAAAAGGAAAGTT+TGG | 0.339852 | 8_3:-48898468 | Msa1292570:CDS |
| TCCAGATAGAGTTCCTTATA+TGG | 0.346090 | 8_3:-48899365 | Msa1292570:CDS |
| TAGAGGAGAATCTAGAATTC+TGG | 0.350291 | 8_3:-48897338 | Msa1292570:CDS |
| AAATCATGAAAAGGATTATA+AGG | 0.353380 | 8_3:-48897769 | Msa1292570:CDS |
| TAATTCCATTGCTAGATATT+GGG | 0.353589 | 8_3:-48899056 | Msa1292570:CDS |
| TCTCTTTCTTTCAACACTAT+AGG | 0.361479 | 8_3:+48897843 | None:intergenic |
| TCGTCGTCCTCATCCATATA+AGG | 0.365262 | 8_3:+48899352 | None:intergenic |
| TGTGATTTAACATCATGTTT+TGG | 0.365811 | 8_3:+48898188 | None:intergenic |
| GTCACGTTTGCAAGAGAAAC+AGG | 0.366657 | 8_3:-48898888 | Msa1292570:CDS |
| CATATTGAAGTTGATTCATA+AGG | 0.369783 | 8_3:+48898798 | None:intergenic |
| TATCGAAGCTCGAAACAAAA+TGG | 0.379973 | 8_3:-48897245 | Msa1292570:CDS |
| TCAACAAAGTTTATTAGCTC+TGG | 0.383758 | 8_3:+48899481 | None:intergenic |
| TTAGAACAAAGCAATCAAAA+TGG | 0.387996 | 8_3:-48900107 | Msa1292570:CDS |
| CCAAAGATAAATGACCTTAG+AGG | 0.389815 | 8_3:+48896790 | None:intergenic |
| CCAAAAGAGTAAGGGAAGTA+AGG | 0.391738 | 8_3:-48898835 | Msa1292570:CDS |
| ACTCTTTGAGTCATCATTGC+AGG | 0.395563 | 8_3:-48897586 | Msa1292570:CDS |
| TTTCGAGGCTGGCTCAAATT+CGG | 0.396521 | 8_3:-48898636 | Msa1292570:CDS |
| GACAGAAGCAATTGTGTTGT+TGG | 0.400635 | 8_3:+48899390 | None:intergenic |
| TGTGATTTAACGTTATGTTT+CGG | 0.407395 | 8_3:+48898002 | None:intergenic |
| CGAAGAACCGTGTTCCTCTA+AGG | 0.410206 | 8_3:-48896804 | Msa1292570:CDS |
| CAATGAATAAATGGACGTAT+TGG | 0.417435 | 8_3:+48897932 | None:intergenic |
| TTTGGAGCTTTCGGAACGTT+TGG | 0.418385 | 8_3:+48899283 | None:intergenic |
| TCGAATCCGAAGGTCTCATC+TGG | 0.419762 | 8_3:+48896824 | None:intergenic |
| AGTTTCTTCTCAAACAGCTT+TGG | 0.420468 | 8_3:-48898543 | Msa1292570:CDS |
| TTCAAAATGAACTCACACTA+TGG | 0.420988 | 8_3:-48897143 | Msa1292570:CDS |
| TACAAAAGATTTACTGATTG+AGG | 0.424969 | 8_3:-48897268 | Msa1292570:CDS |
| AGGTCTCATCTGGTTTCTCT+TGG | 0.426345 | 8_3:+48896834 | None:intergenic |
| GAACGAGAAACTTAGAGAAA+TGG | 0.426500 | 8_3:-48898426 | Msa1292570:CDS |
| TACTGTTGTTGCTTTCTCCT+CGG | 0.428816 | 8_3:+48897707 | None:intergenic |
| GGCTTTAACCGTGACAGAAA+TGG | 0.430771 | 8_3:-48898615 | Msa1292570:CDS |
| TTGCTTTGTTCTAATGTGGC+TGG | 0.431424 | 8_3:+48900116 | None:intergenic |
| ACTTAGAGAAATGGACGAAA+TGG | 0.431565 | 8_3:-48898417 | Msa1292570:CDS |
| AAATCGAGTCCAAAAGAGTA+AGG | 0.433279 | 8_3:-48898844 | Msa1292570:CDS |
| TTTAAAGCTTCTAGAAGAAG+AGG | 0.435154 | 8_3:-48899548 | Msa1292570:CDS |
| GATACCAGACGAGGACGATA+TGG | 0.437799 | 8_3:-48898279 | Msa1292570:CDS |
| ACTCCTAAAGCTCCTAAATC+AGG | 0.441379 | 8_3:-48899175 | Msa1292570:CDS |
| TCGAATCTCTTCGTCTTTCA+CGG | 0.443211 | 8_3:+48897539 | None:intergenic |
| CGAGATGTAAAAGAAGTAAC+AGG | 0.444047 | 8_3:-48898743 | Msa1292570:CDS |
| CTCACCTTATCCTCCTCATT+CGG | 0.449905 | 8_3:+48898068 | None:intergenic |
| TGTTTCATATTTCTGTATCT+CGG | 0.450311 | 8_3:+48897293 | None:intergenic |
| GAAGATTAAAGAACATTTCG+AGG | 0.454058 | 8_3:-48898651 | Msa1292570:CDS |
| GCAATGCTTATTCATGGTGG+TGG | 0.462825 | 8_3:-48900140 | Msa1292570:CDS |
| GAGCAGAAATGTATTACAAA+AGG | 0.465180 | 8_3:-48899507 | Msa1292570:CDS |
| AAATGAACTCACACTATGGC+TGG | 0.467020 | 8_3:-48897139 | Msa1292570:CDS |
| CGAGGAGGCTCGCCGTTTGA+TGG | 0.468797 | 8_3:-48898945 | Msa1292570:CDS |
| ATTAAAGAACATTTCGAGGC+TGG | 0.469351 | 8_3:-48898647 | Msa1292570:CDS |
| CTGCAAGCAATGCTTATTCA+TGG | 0.477662 | 8_3:-48900146 | Msa1292570:CDS |
| GCTGGTTCGCAACCTTGAAA+CGG | 0.479618 | 8_3:-48898483 | Msa1292570:CDS |
| TTGATTGCTTTGTTCTAATG+TGG | 0.483955 | 8_3:+48900112 | None:intergenic |
| GTTGCTGATGAGCTTCAAGC+TGG | 0.484637 | 8_3:-48896937 | Msa1292570:CDS |
| TTGGAGGGAAATGAAGAAAT+CGG | 0.485167 | 8_3:-48897480 | Msa1292570:CDS |
| TGTTCTGATCTTCAACAACT+TGG | 0.492297 | 8_3:+48898372 | None:intergenic |
| ACCAGAAAATCATGTTATTG+AGG | 0.492750 | 8_3:-48897436 | Msa1292570:CDS |
| ATTGGAAAATGAAGTCCAAA+AGG | 0.496529 | 8_3:-48898096 | Msa1292570:CDS |
| TCTCTCTGATAAAGTCCAAA+AGG | 0.496569 | 8_3:-48898303 | Msa1292570:CDS |
| ATAATACAATCAATTGATGC+TGG | 0.499961 | 8_3:-48897792 | Msa1292570:CDS |
| ATATTGAAGTTGATTCATAA+GGG | 0.500924 | 8_3:+48898799 | None:intergenic |
| GGAAACTGAGGGACAGATCA+AGG | 0.501428 | 8_3:-48899035 | Msa1292570:CDS |
| CTCACCATATCGTCCTCGTC+TGG | 0.501832 | 8_3:+48898275 | None:intergenic |
| TCATATTCAAAACCTCGCCT+TGG | 0.503348 | 8_3:+48896977 | None:intergenic |
| CAAAAGAGTAAGGGAAGTAA+GGG | 0.506192 | 8_3:-48898834 | Msa1292570:CDS |
| TAAAGTATTTGAAACAGAAG+AGG | 0.511073 | 8_3:-48898252 | Msa1292570:CDS |
| GATACCGAATGAGGAGGATA+AGG | 0.512984 | 8_3:-48898072 | Msa1292570:CDS |
| TGATGCTGGAAATCATGAAA+AGG | 0.514888 | 8_3:-48897778 | Msa1292570:CDS |
| TCGCAACCTTGAAACGGAAA+AGG | 0.515404 | 8_3:-48898477 | Msa1292570:CDS |
| TCCAATTTGCAAGACGAACT+CGG | 0.522122 | 8_3:-48898995 | Msa1292570:CDS |
| ATCAAGACTACAATGCGCTT+CGG | 0.526939 | 8_3:+48898328 | None:intergenic |
| GAGAAACCAGATGAGACCTT+CGG | 0.531704 | 8_3:-48896830 | Msa1292570:CDS |
| AACAAAGCAATCAAAATGGA+TGG | 0.532965 | 8_3:-48900103 | Msa1292570:CDS |
| CGTACCTATCGGCTAAAGAT+CGG | 0.533688 | 8_3:+48899440 | None:intergenic |
| TATAATGCTGCGAAATTCCA+AGG | 0.542876 | 8_3:-48896994 | Msa1292570:CDS |
| AACTGATGAACTCCATTCGC+TGG | 0.544339 | 8_3:-48898501 | Msa1292570:CDS |
| TCTTCAACTTGATGCTGAGA+AGG | 0.544826 | 8_3:-48896896 | Msa1292570:CDS |
| GAGCCGCTTCTGCCATCAAA+CGG | 0.544838 | 8_3:+48898933 | None:intergenic |
| TTAAAGCTTCTAGAAGAAGA+GGG | 0.544929 | 8_3:-48899547 | Msa1292570:CDS |
| AAAGGATTTGAGTGAAGATG+TGG | 0.556266 | 8_3:-48898717 | Msa1292570:CDS |
| TAGAGTTCCTTATATGGATG+AGG | 0.558198 | 8_3:-48899359 | Msa1292570:CDS |
| TTGCAAGACGAACTCGGTGA+AGG | 0.558534 | 8_3:-48898989 | Msa1292570:CDS |
| TGTTGAAGAGAAGTTTAGGA+TGG | 0.566244 | 8_3:-48897376 | Msa1292570:CDS |
| TCTGCAAGGTGCTTATAAAG+TGG | 0.568092 | 8_3:+48897168 | None:intergenic |
| TGCTAGATATTGGGAAACTG+AGG | 0.569587 | 8_3:-48899047 | Msa1292570:CDS |
| GGAAAACAGCGCGTTGCTGA+AGG | 0.570843 | 8_3:-48897118 | Msa1292570:CDS |
| TCGCCGTTTGATGGCAGAAG+CGG | 0.572967 | 8_3:-48898936 | Msa1292570:CDS |
| TGATGATGCAAAATCCAATA+CGG | 0.576914 | 8_3:-48898129 | Msa1292570:CDS |
| TAGAAAGCAAGCAATTGAAG+AGG | 0.578147 | 8_3:-48899146 | Msa1292570:CDS |
| TTGCTGATGAGCTTCAAGCT+GGG | 0.579094 | 8_3:-48896936 | Msa1292570:CDS |
| CAAGGTTGCGAACCAGCGAA+TGG | 0.582849 | 8_3:+48898489 | None:intergenic |
| GTTGAAGAGAAGTTTAGGAT+GGG | 0.590016 | 8_3:-48897375 | Msa1292570:CDS |
| CCAAAAGGTGATACCGAATG+AGG | 0.590400 | 8_3:-48898081 | Msa1292570:CDS |
| AATGAAATGTGCAGATATGG+AGG | 0.592734 | 8_3:-48899587 | Msa1292570:intron |
| TTATAAGGAAATTTCATCTG+AGG | 0.593385 | 8_3:-48897754 | Msa1292570:CDS |
| CTTGTTACTGAATTTCCTTG+TGG | 0.598228 | 8_3:+48899216 | None:intergenic |
| TATATCATCATTTCAAAGCA+CGG | 0.601898 | 8_3:+48896716 | None:intergenic |
| ACAAAATGGAAAGCAACAGA+AGG | 0.603333 | 8_3:-48897231 | Msa1292570:CDS |
| TGCTGCGAAATTCCAAGGCG+AGG | 0.604091 | 8_3:-48896989 | Msa1292570:CDS |
| AAAAGAAGTAACAGGAACAA+AGG | 0.607695 | 8_3:-48898735 | Msa1292570:CDS |
| TGATAAGTGATCGTACCTAT+CGG | 0.609920 | 8_3:+48899429 | None:intergenic |
| CAATGCTTATTCATGGTGGT+GGG | 0.611643 | 8_3:-48900139 | Msa1292570:CDS |
| ACGACGACGAAGCATCGCCA+AGG | 0.611893 | 8_3:-48899336 | Msa1292570:CDS |
| AATCGAGTCCAAAAGAGTAA+GGG | 0.614608 | 8_3:-48898843 | Msa1292570:CDS |
| GGGAATCGACGAACTTCTAG+AGG | 0.619415 | 8_3:-48897355 | Msa1292570:CDS |
| AGTTTCCCAATATCTAGCAA+TGG | 0.619821 | 8_3:+48899051 | None:intergenic |
| TGTTAATGTTATTGATGACG+AGG | 0.631377 | 8_3:-48898963 | Msa1292570:CDS |
| CGGCTAAAGATCGGTATGCA+CGG | 0.631655 | 8_3:+48899449 | None:intergenic |
| AATCCAATTCGCAAAAGCCG+AGG | 0.632575 | 8_3:-48898772 | Msa1292570:CDS |
| ACACGGTTCTTCGAATCCGA+AGG | 0.634630 | 8_3:+48896814 | None:intergenic |
| TGGATGGAACAAAACCTCCA+AGG | 0.641564 | 8_3:-48900087 | Msa1292570:intron |
| GCTAGATATTGGGAAACTGA+GGG | 0.645079 | 8_3:-48899046 | Msa1292570:CDS |
| TAATGTTATTGATGACGAGG+AGG | 0.647964 | 8_3:-48898960 | Msa1292570:CDS |
| CATACCGATCTTTAGCCGAT+AGG | 0.649267 | 8_3:-48899444 | Msa1292570:CDS |
| AAAGGTGATACCGAATGAGG+AGG | 0.672192 | 8_3:-48898078 | Msa1292570:CDS |
| TAACGACAGCGACAGCCACA+AGG | 0.673857 | 8_3:-48899231 | Msa1292570:CDS |
| CAAGCAATGCTTATTCATGG+TGG | 0.700776 | 8_3:-48900143 | Msa1292570:CDS |
| CCAAAAGGTGATACCAGACG+AGG | 0.715557 | 8_3:-48898288 | Msa1292570:CDS |
| TAAATGACCTTAGAGGAACA+CGG | 0.755952 | 8_3:+48896797 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TATATAGAAACAAGAAAATT+AGG | + | chr8_3:48896832-48896851 | None:intergenic | 15.0% |
| !!! | TGCTATTTCTTATTGTTTTT+TGG | - | chr8_3:48896913-48896932 | Msa1292570:CDS | 20.0% |
| !! | AAAAGTTAACTATTCATGTA+CGG | + | chr8_3:48897101-48897120 | None:intergenic | 20.0% |
| !!! | ATATTGAAGTTGATTCATAA+GGG | + | chr8_3:48898086-48898105 | None:intergenic | 20.0% |
| !!! | ATCATCATTCAATAAGATTT+TGG | + | chr8_3:48898923-48898942 | None:intergenic | 20.0% |
| !!! | TTCATTTTCCAATGAATAAA+TGG | + | chr8_3:48898962-48898981 | None:intergenic | 20.0% |
| !! | AAATCATGAAAAGGATTATA+AGG | - | chr8_3:48899113-48899132 | Msa1292570:CDS | 20.0% |
| ! | TTAGAACAAAGCAATCAAAA+TGG | - | chr8_3:48896775-48896794 | Msa1292570:CDS | 25.0% |
| ! | ATTAGGAGAAAAAATAACCT+TGG | + | chr8_3:48896815-48896834 | None:intergenic | 25.0% |
| ! | TTCTTATGGAAAAAAAATCG+AGG | - | chr8_3:48896954-48896973 | Msa1292570:CDS | 25.0% |
| !!! | ACACTTTTTAAATCTTTGAG+TGG | + | chr8_3:48897629-48897648 | None:intergenic | 25.0% |
| ! | ATAATTCCATTGCTAGATAT+TGG | - | chr8_3:48897825-48897844 | Msa1292570:CDS | 25.0% |
| ! | TAATTCCATTGCTAGATATT+GGG | - | chr8_3:48897826-48897845 | Msa1292570:CDS | 25.0% |
| !! | CATATTGAAGTTGATTCATA+AGG | + | chr8_3:48898087-48898106 | None:intergenic | 25.0% |
| !! | TAAAGTATTTGAAACAGAAG+AGG | - | chr8_3:48898630-48898649 | Msa1292570:CDS | 25.0% |
| !! | TGTGATTTAACATCATGTTT+TGG | + | chr8_3:48898697-48898716 | None:intergenic | 25.0% |
| !! | TTCATTTTCCAATGAATCAA+TGG | + | chr8_3:48898779-48898798 | None:intergenic | 25.0% |
| ! | TGTGATTTAACGTTATGTTT+CGG | + | chr8_3:48898883-48898902 | None:intergenic | 25.0% |
| !!! | TTCTTCTTTTGTTTGTGAAT+CGG | + | chr8_3:48898995-48899014 | None:intergenic | 25.0% |
| ! | ATAATACAATCAATTGATGC+TGG | - | chr8_3:48899090-48899109 | Msa1292570:CDS | 25.0% |
| ! | TTATAAGGAAATTTCATCTG+AGG | - | chr8_3:48899128-48899147 | Msa1292570:CDS | 25.0% |
| !! | TGTTTCATATTTCTGTATCT+CGG | + | chr8_3:48899592-48899611 | None:intergenic | 25.0% |
| !! | TACAAAAGATTTACTGATTG+AGG | - | chr8_3:48899614-48899633 | Msa1292570:intron | 25.0% |
| ! | GCAAAGTTGAATGAAAAATT+TGG | - | chr8_3:48900014-48900033 | Msa1292570:intron | 25.0% |
| !!! | ATAGACTGTTTTTGTTTCTT+TGG | + | chr8_3:48900125-48900144 | None:intergenic | 25.0% |
| ! | TTGATTGCTTTGTTCTAATG+TGG | + | chr8_3:48896773-48896792 | None:intergenic | 30.0% |
| AACAAAGCAATCAAAATGGA+TGG | - | chr8_3:48896779-48896798 | Msa1292570:CDS | 30.0% | |
| AAGAGAATTGCTCTTTCTTA+TGG | - | chr8_3:48896940-48896959 | Msa1292570:CDS | 30.0% | |
| TATGGAAAAAAAATCGAGGA+AGG | - | chr8_3:48896958-48896977 | Msa1292570:CDS | 30.0% | |
| ! | AAAAACGAGCAGTAAGTTTT+TGG | - | chr8_3:48896994-48897013 | Msa1292570:CDS | 30.0% |
| AGAATCACACATATTAAGTG+TGG | - | chr8_3:48897153-48897172 | Msa1292570:CDS | 30.0% | |
| CCAATATGGTAATAGGTTAT+GGG | + | chr8_3:48897229-48897248 | None:intergenic | 30.0% | |
| ACCAATATGGTAATAGGTTA+TGG | + | chr8_3:48897230-48897249 | None:intergenic | 30.0% | |
| TACACAACCAATATGGTAAT+AGG | + | chr8_3:48897236-48897255 | None:intergenic | 30.0% | |
| TAACAAGTACACAACCAATA+TGG | + | chr8_3:48897243-48897262 | None:intergenic | 30.0% | |
| ! | TTTAAAGCTTCTAGAAGAAG+AGG | - | chr8_3:48897334-48897353 | Msa1292570:CDS | 30.0% |
| ! | TTAAAGCTTCTAGAAGAAGA+GGG | - | chr8_3:48897335-48897354 | Msa1292570:CDS | 30.0% |
| GAGCAGAAATGTATTACAAA+AGG | - | chr8_3:48897375-48897394 | Msa1292570:CDS | 30.0% | |
| TCAACAAAGTTTATTAGCTC+TGG | + | chr8_3:48897404-48897423 | None:intergenic | 30.0% | |
| TTTCTACTCAATCCTGATTT+AGG | + | chr8_3:48897722-48897741 | None:intergenic | 30.0% | |
| !! | TGTTAATGTTATTGATGACG+AGG | - | chr8_3:48897919-48897938 | Msa1292570:CDS | 30.0% |
| ! | ACTTCTTTTACATCTCGTTT+CGG | + | chr8_3:48898136-48898155 | None:intergenic | 30.0% |
| AAAAGAAGTAACAGGAACAA+AGG | - | chr8_3:48898147-48898166 | Msa1292570:CDS | 30.0% | |
| GAAGATTAAAGAACATTTCG+AGG | - | chr8_3:48898231-48898250 | Msa1292570:CDS | 30.0% | |
| ! | TGATGATGCAAAATCCAATA+CGG | - | chr8_3:48898753-48898772 | Msa1292570:CDS | 30.0% |
| ATTGGAAAATGAAGTCCAAA+AGG | - | chr8_3:48898786-48898805 | Msa1292570:CDS | 30.0% | |
| CAATGAATAAATGGACGTAT+TGG | + | chr8_3:48898953-48898972 | None:intergenic | 30.0% | |
| CAATACGTCCATTTATTCAT+TGG | - | chr8_3:48898951-48898970 | Msa1292570:CDS | 30.0% | |
| TCTCTTTCTTTCAACACTAT+AGG | + | chr8_3:48899042-48899061 | None:intergenic | 30.0% | |
| !! | TACTTTTAAAGAAGATTCCG+AGG | - | chr8_3:48899158-48899177 | Msa1292570:CDS | 30.0% |
| !!! | ATGCTTTGCTTTTAGAGTAT+AGG | - | chr8_3:48899205-48899224 | Msa1292570:CDS | 30.0% |
| ! | TCAATAACATGATTTTCTGG+TGG | + | chr8_3:48899447-48899466 | None:intergenic | 30.0% |
| ACCAGAAAATCATGTTATTG+AGG | - | chr8_3:48899446-48899465 | Msa1292570:CDS | 30.0% | |
| ! | TCCTCAATAACATGATTTTC+TGG | + | chr8_3:48899450-48899469 | None:intergenic | 30.0% |
| TTCAAAATGAACTCACACTA+TGG | - | chr8_3:48899739-48899758 | Msa1292570:intron | 30.0% | |
| ! | AGTCTATCTTTTCAATGCAT+AGG | - | chr8_3:48900138-48900157 | Msa1292570:CDS | 30.0% |
| AGGAGAAAAAATAACCTTGG+AGG | + | chr8_3:48896812-48896831 | None:intergenic | 35.0% | |
| ! | AAGAGATTTGCTCTTTCGTA+CGG | - | chr8_3:48897021-48897040 | Msa1292570:CDS | 35.0% |
| CATATTAAGTGTGGAGAAGA+TGG | - | chr8_3:48897162-48897181 | Msa1292570:CDS | 35.0% | |
| CCCATAACCTATTACCATAT+TGG | - | chr8_3:48897226-48897245 | Msa1292570:CDS | 35.0% | |
| CAGAATGAAATGTGCAGATA+TGG | - | chr8_3:48897292-48897311 | Msa1292570:CDS | 35.0% | |
| AATGAAATGTGCAGATATGG+AGG | - | chr8_3:48897295-48897314 | Msa1292570:CDS | 35.0% | |
| TGATAAGTGATCGTACCTAT+CGG | + | chr8_3:48897456-48897475 | None:intergenic | 35.0% | |
| TCCAGATAGAGTTCCTTATA+TGG | - | chr8_3:48897517-48897536 | Msa1292570:CDS | 35.0% | |
| TCCATATAAGGAACTCTATC+TGG | + | chr8_3:48897521-48897540 | None:intergenic | 35.0% | |
| TAGAGTTCCTTATATGGATG+AGG | - | chr8_3:48897523-48897542 | Msa1292570:CDS | 35.0% | |
| ! | AATCCTTCTGGCATTTTTCT+TGG | + | chr8_3:48897575-48897594 | None:intergenic | 35.0% |
| AAATCTTTGAGTGGAGTCTT+TGG | + | chr8_3:48897620-48897639 | None:intergenic | 35.0% | |
| CTTGTTACTGAATTTCCTTG+TGG | + | chr8_3:48897669-48897688 | None:intergenic | 35.0% | |
| AATCCTGATTTAGGAGCTTT+AGG | + | chr8_3:48897713-48897732 | None:intergenic | 35.0% | |
| TAGAAAGCAAGCAATTGAAG+AGG | - | chr8_3:48897736-48897755 | Msa1292570:CDS | 35.0% | |
| AGTTTCCCAATATCTAGCAA+TGG | + | chr8_3:48897834-48897853 | None:intergenic | 35.0% | |
| !! | TAATGTTATTGATGACGAGG+AGG | - | chr8_3:48897922-48897941 | Msa1292570:CDS | 35.0% |
| AAATCGAGTCCAAAAGAGTA+AGG | - | chr8_3:48898038-48898057 | Msa1292570:CDS | 35.0% | |
| AATCGAGTCCAAAAGAGTAA+GGG | - | chr8_3:48898039-48898058 | Msa1292570:CDS | 35.0% | |
| CAAAAGAGTAAGGGAAGTAA+GGG | - | chr8_3:48898048-48898067 | Msa1292570:CDS | 35.0% | |
| CGAGATGTAAAAGAAGTAAC+AGG | - | chr8_3:48898139-48898158 | Msa1292570:CDS | 35.0% | |
| AAAGGATTTGAGTGAAGATG+TGG | - | chr8_3:48898165-48898184 | Msa1292570:CDS | 35.0% | |
| ATTAAAGAACATTTCGAGGC+TGG | - | chr8_3:48898235-48898254 | Msa1292570:CDS | 35.0% | |
| !! | TTTTTCTGCCATTTCTGTCA+CGG | + | chr8_3:48898278-48898297 | None:intergenic | 35.0% |
| AGTTTCTTCTCAAACAGCTT+TGG | - | chr8_3:48898339-48898358 | Msa1292570:CDS | 35.0% | |
| ! | AACTTTCCTTTTCCGTTTCA+AGG | + | chr8_3:48898414-48898433 | None:intergenic | 35.0% |
| TGAAACGGAAAAGGAAAGTT+TGG | - | chr8_3:48898414-48898433 | Msa1292570:CDS | 35.0% | |
| GAACGAGAAACTTAGAGAAA+TGG | - | chr8_3:48898456-48898475 | Msa1292570:CDS | 35.0% | |
| ACTTAGAGAAATGGACGAAA+TGG | - | chr8_3:48898465-48898484 | Msa1292570:CDS | 35.0% | |
| TGTTCTGATCTTCAACAACT+TGG | + | chr8_3:48898513-48898532 | None:intergenic | 35.0% | |
| TCTCTCTGATAAAGTCCAAA+AGG | - | chr8_3:48898579-48898598 | Msa1292570:CDS | 35.0% | |
| TGATGCTGGAAATCATGAAA+AGG | - | chr8_3:48899104-48899123 | Msa1292570:CDS | 35.0% | |
| ! | AAGTCTTTTGCAGAAAAGCT+TGG | - | chr8_3:48899383-48899402 | Msa1292570:CDS | 35.0% |
| TTGGAGGGAAATGAAGAAAT+CGG | - | chr8_3:48899402-48899421 | Msa1292570:CDS | 35.0% | |
| TGTTGAAGAGAAGTTTAGGA+TGG | - | chr8_3:48899506-48899525 | Msa1292570:CDS | 35.0% | |
| ! | GTTGAAGAGAAGTTTAGGAT+GGG | - | chr8_3:48899507-48899526 | Msa1292570:CDS | 35.0% |
| ! | TAGAGGAGAATCTAGAATTC+TGG | - | chr8_3:48899544-48899563 | Msa1292570:CDS | 35.0% |
| TATCGAAGCTCGAAACAAAA+TGG | - | chr8_3:48899637-48899656 | Msa1292570:intron | 35.0% | |
| ACAAAATGGAAAGCAACAGA+AGG | - | chr8_3:48899651-48899670 | Msa1292570:intron | 35.0% | |
| ! | GTTCATTTTGAATCTCTGCA+AGG | + | chr8_3:48899731-48899750 | None:intergenic | 35.0% |
| ATGCTGTTGTTATCTCTTCT+TGG | + | chr8_3:48899827-48899846 | None:intergenic | 35.0% | |
| TATAATGCTGCGAAATTCCA+AGG | - | chr8_3:48899888-48899907 | Msa1292570:intron | 35.0% | |
| TAAATGACCTTAGAGGAACA+CGG | + | chr8_3:48900088-48900107 | None:intergenic | 35.0% | |
| CCAAAGATAAATGACCTTAG+AGG | + | chr8_3:48900095-48900114 | None:intergenic | 35.0% | |
| !! | CCTCTAAGGTCATTTATCTT+TGG | - | chr8_3:48900092-48900111 | Msa1292570:CDS | 35.0% |
| CTGCAAGCAATGCTTATTCA+TGG | - | chr8_3:48896736-48896755 | Msa1292570:CDS | 40.0% | |
| CAAGCAATGCTTATTCATGG+TGG | - | chr8_3:48896739-48896758 | Msa1292570:CDS | 40.0% | |
| CAATGCTTATTCATGGTGGT+GGG | - | chr8_3:48896743-48896762 | Msa1292570:CDS | 40.0% | |
| ! | TTGCTTTGTTCTAATGTGGC+TGG | + | chr8_3:48896769-48896788 | None:intergenic | 40.0% |
| !! | AAAAATCGAGGAAGGTGTCA+TGG | - | chr8_3:48896966-48896985 | Msa1292570:CDS | 40.0% |
| ! | AGAGATTTGCTCTTTCGTAC+GGG | - | chr8_3:48897022-48897041 | Msa1292570:CDS | 40.0% |
| TGGGAACATTTGATGTGTTG+TGG | + | chr8_3:48897210-48897229 | None:intergenic | 40.0% | |
| GACAGAAGCAATTGTGTTGT+TGG | + | chr8_3:48897495-48897514 | None:intergenic | 40.0% | |
| ! | ACGTTTGGTTTCAATCCTTC+TGG | + | chr8_3:48897587-48897606 | None:intergenic | 40.0% |
| ACTCCTAAAGCTCCTAAATC+AGG | - | chr8_3:48897707-48897726 | Msa1292570:CDS | 40.0% | |
| TGCTAGATATTGGGAAACTG+AGG | - | chr8_3:48897835-48897854 | Msa1292570:CDS | 40.0% | |
| GCTAGATATTGGGAAACTGA+GGG | - | chr8_3:48897836-48897855 | Msa1292570:CDS | 40.0% | |
| TCCAATTTGCAAGACGAACT+CGG | - | chr8_3:48897887-48897906 | Msa1292570:CDS | 40.0% | |
| ! | CCTTACTTCCCTTACTCTTT+TGG | + | chr8_3:48898050-48898069 | None:intergenic | 40.0% |
| CCAAAAGAGTAAGGGAAGTA+AGG | - | chr8_3:48898047-48898066 | Msa1292570:CDS | 40.0% | |
| ATCAAGACTACAATGCGCTT+CGG | + | chr8_3:48898557-48898576 | None:intergenic | 40.0% | |
| CAATGAATCAATGGCCGTAT+TGG | + | chr8_3:48898770-48898789 | None:intergenic | 40.0% | |
| !! | CAATACGGCCATTGATTCAT+TGG | - | chr8_3:48898768-48898787 | Msa1292570:CDS | 40.0% |
| !! | TACTGTTGTTGCTTTCTCCT+CGG | + | chr8_3:48899178-48899197 | None:intergenic | 40.0% |
| ACTCTTTGAGTCATCATTGC+AGG | - | chr8_3:48899296-48899315 | Msa1292570:CDS | 40.0% | |
| TCGAATCTCTTCGTCTTTCA+CGG | + | chr8_3:48899346-48899365 | None:intergenic | 40.0% | |
| ! | TCTTTTGCAGAAAAGCTTGG+AGG | - | chr8_3:48899386-48899405 | Msa1292570:CDS | 40.0% |
| ! | CTTTTGCAGAAAAGCTTGGA+GGG | - | chr8_3:48899387-48899406 | Msa1292570:CDS | 40.0% |
| ! | TCAACAGCAGAAGTTGATTC+TGG | + | chr8_3:48899492-48899511 | None:intergenic | 40.0% |
| CTGCTGTTGAAGAGAAGTTT+AGG | - | chr8_3:48899502-48899521 | Msa1292570:CDS | 40.0% | |
| ! | TCTGCAAGGTGCTTATAAAG+TGG | + | chr8_3:48899717-48899736 | None:intergenic | 40.0% |
| AAATGAACTCACACTATGGC+TGG | - | chr8_3:48899743-48899762 | Msa1292570:intron | 40.0% | |
| TCATATTCAAAACCTCGCCT+TGG | + | chr8_3:48899908-48899927 | None:intergenic | 40.0% | |
| TCTTCAACTTGATGCTGAGA+AGG | - | chr8_3:48899986-48900005 | Msa1292570:intron | 40.0% | |
| GCAATGCTTATTCATGGTGG+TGG | - | chr8_3:48896742-48896761 | Msa1292570:CDS | 45.0% | |
| TGGATGGAACAAAACCTCCA+AGG | - | chr8_3:48896795-48896814 | Msa1292570:CDS | 45.0% | |
| ! | GAGATTTGCTCTTTCGTACG+GGG | - | chr8_3:48897023-48897042 | Msa1292570:CDS | 45.0% |
| CATACCGATCTTTAGCCGAT+AGG | - | chr8_3:48897438-48897457 | Msa1292570:CDS | 45.0% | |
| ! | CGTACCTATCGGCTAAAGAT+CGG | + | chr8_3:48897445-48897464 | None:intergenic | 45.0% |
| TCGTCGTCCTCATCCATATA+AGG | + | chr8_3:48897533-48897552 | None:intergenic | 45.0% | |
| ! | CCTTCTGGCATTTTTCTTGG+TGG | + | chr8_3:48897572-48897591 | None:intergenic | 45.0% |
| CCACCAAGAAAAATGCCAGA+AGG | - | chr8_3:48897569-48897588 | Msa1292570:CDS | 45.0% | |
| ! | TTTGGAGCTTTCGGAACGTT+TGG | + | chr8_3:48897602-48897621 | None:intergenic | 45.0% |
| !! | AGTGGAGTCTTTGGAGCTTT+CGG | + | chr8_3:48897611-48897630 | None:intergenic | 45.0% |
| ACCGAGTTCGTCTTGCAAAT+TGG | + | chr8_3:48897891-48897910 | None:intergenic | 45.0% | |
| GCAAACGTGACAATGCTTCT+TGG | + | chr8_3:48897985-48898004 | None:intergenic | 45.0% | |
| GTCACGTTTGCAAGAGAAAC+AGG | - | chr8_3:48897994-48898013 | Msa1292570:CDS | 45.0% | |
| AATCCAATTCGCAAAAGCCG+AGG | - | chr8_3:48898110-48898129 | Msa1292570:CDS | 45.0% | |
| TTTACATCTCGTTTCGGCCT+CGG | + | chr8_3:48898130-48898149 | None:intergenic | 45.0% | |
| ! | TTTCGAGGCTGGCTCAAATT+CGG | - | chr8_3:48898246-48898265 | Msa1292570:CDS | 45.0% |
| ! | GGCTTTAACCGTGACAGAAA+TGG | - | chr8_3:48898267-48898286 | Msa1292570:CDS | 45.0% |
| AACTGATGAACTCCATTCGC+TGG | - | chr8_3:48898381-48898400 | Msa1292570:CDS | 45.0% | |
| TCGCAACCTTGAAACGGAAA+AGG | - | chr8_3:48898405-48898424 | Msa1292570:CDS | 45.0% | |
| ! | CCTCATTCGGTATCACCTTT+TGG | + | chr8_3:48898804-48898823 | None:intergenic | 45.0% |
| CCAAAAGGTGATACCGAATG+AGG | - | chr8_3:48898801-48898820 | Msa1292570:CDS | 45.0% | |
| AAAGGTGATACCGAATGAGG+AGG | - | chr8_3:48898804-48898823 | Msa1292570:CDS | 45.0% | |
| GATACCGAATGAGGAGGATA+AGG | - | chr8_3:48898810-48898829 | Msa1292570:CDS | 45.0% | |
| CTCACCTTATCCTCCTCATT+CGG | + | chr8_3:48898817-48898836 | None:intergenic | 45.0% | |
| !! | TGATTTTCTGGTGGCTGCAA+AGG | + | chr8_3:48899438-48899457 | None:intergenic | 45.0% |
| TTGCTGATGAGCTTCAAGCT+GGG | - | chr8_3:48899946-48899965 | Msa1292570:intron | 45.0% | |
| ! | AGGTCTCATCTGGTTTCTCT+TGG | + | chr8_3:48900051-48900070 | None:intergenic | 45.0% |
| GAGAAACCAGATGAGACCTT+CGG | - | chr8_3:48900052-48900071 | Msa1292570:intron | 45.0% | |
| CGGCTAAAGATCGGTATGCA+CGG | + | chr8_3:48897436-48897455 | None:intergenic | 50.0% | |
| !! | GGCATTTTTCTTGGTGGCCT+TGG | + | chr8_3:48897566-48897585 | None:intergenic | 50.0% |
| GGAAACTGAGGGACAGATCA+AGG | - | chr8_3:48897847-48897866 | Msa1292570:CDS | 50.0% | |
| ! | TTGCAAGACGAACTCGGTGA+AGG | - | chr8_3:48897893-48897912 | Msa1292570:CDS | 50.0% |
| !! | GCTGGTTCGCAACCTTGAAA+CGG | - | chr8_3:48898399-48898418 | Msa1292570:CDS | 50.0% |
| ! | CCTCGTCTGGTATCACCTTT+TGG | + | chr8_3:48898597-48898616 | None:intergenic | 50.0% |
| CCAAAAGGTGATACCAGACG+AGG | - | chr8_3:48898594-48898613 | Msa1292570:CDS | 50.0% | |
| GATACCAGACGAGGACGATA+TGG | - | chr8_3:48898603-48898622 | Msa1292570:CDS | 50.0% | |
| !! | TTTTCTGGTGGCTGCAAAGG+AGG | + | chr8_3:48899435-48899454 | None:intergenic | 50.0% |
| GGGAATCGACGAACTTCTAG+AGG | - | chr8_3:48899527-48899546 | Msa1292570:CDS | 50.0% | |
| GTTGCTGATGAGCTTCAAGC+TGG | - | chr8_3:48899945-48899964 | Msa1292570:intron | 50.0% | |
| TCGAATCCGAAGGTCTCATC+TGG | + | chr8_3:48900061-48900080 | None:intergenic | 50.0% | |
| ACACGGTTCTTCGAATCCGA+AGG | + | chr8_3:48900071-48900090 | None:intergenic | 50.0% | |
| CGAAGAACCGTGTTCCTCTA+AGG | - | chr8_3:48900078-48900097 | Msa1292570:intron | 50.0% | |
| TAACGACAGCGACAGCCACA+AGG | - | chr8_3:48897651-48897670 | Msa1292570:CDS | 55.0% | |
| ! | TCGCCGTTTGATGGCAGAAG+CGG | - | chr8_3:48897946-48897965 | Msa1292570:CDS | 55.0% |
| GAGCCGCTTCTGCCATCAAA+CGG | + | chr8_3:48897952-48897971 | None:intergenic | 55.0% | |
| CAAGGTTGCGAACCAGCGAA+TGG | + | chr8_3:48898396-48898415 | None:intergenic | 55.0% | |
| CTCACCATATCGTCCTCGTC+TGG | + | chr8_3:48898610-48898629 | None:intergenic | 55.0% | |
| GGAAAACAGCGCGTTGCTGA+AGG | - | chr8_3:48899764-48899783 | Msa1292570:intron | 55.0% | |
| TGCTGCGAAATTCCAAGGCG+AGG | - | chr8_3:48899893-48899912 | Msa1292570:intron | 55.0% | |
| !! | ACGACGACGAAGCATCGCCA+AGG | - | chr8_3:48897546-48897565 | Msa1292570:CDS | 60.0% |
| ! | CGGCCTCGGCTTTTGCGAAT+TGG | + | chr8_3:48898116-48898135 | None:intergenic | 60.0% |
| CGAGGAGGCTCGCCGTTTGA+TGG | - | chr8_3:48897937-48897956 | Msa1292570:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_3 | gene | 48896723 | 48900181 | 48896723 | ID=Msa1292570;Name=Msa1292570 |
| chr8_3 | mRNA | 48896723 | 48900181 | 48896723 | ID=Msa1292570-mRNA-1;Parent=Msa1292570;Name=Msa1292570-mRNA-1;_AED=0.00;_eAED=0.01;_QI=0|0|0|1|0|0|2|0|988 |
| chr8_3 | exon | 48900088 | 48900181 | 48900088 | ID=Msa1292570-mRNA-1:exon:13623;Parent=Msa1292570-mRNA-1 |
| chr8_3 | exon | 48896723 | 48899595 | 48896723 | ID=Msa1292570-mRNA-1:exon:13622;Parent=Msa1292570-mRNA-1 |
| chr8_3 | CDS | 48900088 | 48900181 | 48900088 | ID=Msa1292570-mRNA-1:cds;Parent=Msa1292570-mRNA-1 |
| chr8_3 | CDS | 48896723 | 48899595 | 48896723 | ID=Msa1292570-mRNA-1:cds;Parent=Msa1292570-mRNA-1 |
| Gene Sequence |
| Protein sequence |
