Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0688270 | XP_013455842.1 | 85.440 | 364 | 30 | 1 | 2 | 342 | 128 | 491 | 0.0 | 645 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0688270 | sp|Q93ZB9|FACR3_ARATH | 56.749 | 363 | 133 | 2 | 2 | 341 | 132 | 493 | 1.56e-153 | 443 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0688270 | A0A072ULF3 | 85.440 | 364 | 30 | 1 | 2 | 342 | 128 | 491 | 0.0 | 645 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0002460 | Msa0688270 | 0.811729 | 6.051000e-51 | -8.615850e-47 |
| Msa0006070 | Msa0688270 | 0.807131 | 5.871139e-50 | -8.615850e-47 |
| Msa0006110 | Msa0688270 | 0.833275 | 5.856943e-56 | -8.615850e-47 |
| Msa0011170 | Msa0688270 | 0.804371 | 2.230231e-49 | -8.615850e-47 |
| Msa0014710 | Msa0688270 | 0.810179 | 1.311166e-50 | -8.615850e-47 |
| Msa0015400 | Msa0688270 | 0.803232 | 3.846651e-49 | -8.615850e-47 |
| Msa0017070 | Msa0688270 | 0.806942 | 6.438525e-50 | -8.615850e-47 |
| Msa0017510 | Msa0688270 | 0.805188 | 1.505711e-49 | -8.615850e-47 |
| Msa0018650 | Msa0688270 | 0.800367 | 1.489708e-48 | -8.615850e-47 |
| Msa0019580 | Msa0688270 | 0.806062 | 9.871024e-50 | -8.615850e-47 |
| Msa0020420 | Msa0688270 | 0.804732 | 1.875303e-49 | -8.615850e-47 |
| Msa0034110 | Msa0688270 | 0.807415 | 5.111420e-50 | -8.615850e-47 |
| Msa0036140 | Msa0688270 | 0.826399 | 2.771476e-54 | -8.615850e-47 |
| Msa0036920 | Msa0688270 | 0.800314 | 1.527655e-48 | -8.615850e-47 |
| Msa0044260 | Msa0688270 | 0.801034 | 1.089051e-48 | -8.615850e-47 |
| Msa0054480 | Msa0688270 | 0.806186 | 9.295773e-50 | -8.615850e-47 |
| Msa0064970 | Msa0688270 | 0.826902 | 2.101897e-54 | -8.615850e-47 |
| Msa0075880 | Msa0688270 | 0.805729 | 1.159810e-49 | -8.615850e-47 |
| Msa0078900 | Msa0688270 | 0.827660 | 1.383971e-54 | -8.615850e-47 |
| Msa0080090 | Msa0688270 | 0.801175 | 1.019182e-48 | -8.615850e-47 |
| Msa0084380 | Msa0688270 | 0.801314 | 9.546740e-49 | -8.615850e-47 |
| Msa0086760 | Msa0688270 | 0.814796 | 1.283834e-51 | -8.615850e-47 |
| Msa0091210 | Msa0688270 | -0.806912 | 6.532685e-50 | -8.615850e-47 |
| Msa0095560 | Msa0688270 | 0.801692 | 7.986789e-49 | -8.615850e-47 |
| Msa0107580 | Msa0688270 | 0.804850 | 1.772232e-49 | -8.615850e-47 |
| Msa0114060 | Msa0688270 | 0.832542 | 8.908665e-56 | -8.615850e-47 |
| Msa0611800 | Msa0688270 | 0.800674 | 1.289980e-48 | -8.615850e-47 |
| Msa0616070 | Msa0688270 | 0.803790 | 2.945902e-49 | -8.615850e-47 |
| Msa0625720 | Msa0688270 | 0.815953 | 7.096372e-52 | -8.615850e-47 |
| Msa0629450 | Msa0688270 | 0.800600 | 1.335618e-48 | -8.615850e-47 |
| Msa0633700 | Msa0688270 | 0.802852 | 4.607956e-49 | -8.615850e-47 |
| Msa0636170 | Msa0688270 | 0.806169 | 9.373228e-50 | -8.615850e-47 |
| Msa0637900 | Msa0688270 | 0.800641 | 1.310522e-48 | -8.615850e-47 |
| Msa0657970 | Msa0688270 | 0.832460 | 9.334541e-56 | -8.615850e-47 |
| Msa0661650 | Msa0688270 | 0.833562 | 4.966532e-56 | -8.615850e-47 |
| Msa0663380 | Msa0688270 | 0.806221 | 9.137639e-50 | -8.615850e-47 |
| Msa0663390 | Msa0688270 | 0.817758 | 2.792703e-52 | -8.615850e-47 |
| Msa0667340 | Msa0688270 | 0.802724 | 4.897546e-49 | -8.615850e-47 |
| Msa0672690 | Msa0688270 | 0.810106 | 1.359405e-50 | -8.615850e-47 |
| Msa0673460 | Msa0688270 | 0.810474 | 1.132469e-50 | -8.615850e-47 |
| Msa0678930 | Msa0688270 | 0.806463 | 8.125100e-50 | -8.615850e-47 |
| Msa0680660 | Msa0688270 | 0.856418 | 3.261867e-62 | -8.615850e-47 |
| Msa0681250 | Msa0688270 | 0.819466 | 1.144569e-52 | -8.615850e-47 |
| Msa0681270 | Msa0688270 | 0.821802 | 3.325824e-53 | -8.615850e-47 |
| Msa0688270 | Msa0689800 | 0.809526 | 1.811530e-50 | -8.615850e-47 |
| Msa0688270 | Msa0693010 | -0.808934 | 2.426323e-50 | -8.615850e-47 |
| Msa0688270 | Msa0693380 | 0.802980 | 4.336583e-49 | -8.615850e-47 |
| Msa0688270 | Msa0694370 | 0.809500 | 1.834613e-50 | -8.615850e-47 |
| Msa0688270 | Msa0697060 | 0.810919 | 9.070287e-51 | -8.615850e-47 |
| Msa0688270 | Msa0711830 | 0.803403 | 3.544756e-49 | -8.615850e-47 |
| Msa0688270 | Msa0716530 | 0.800874 | 1.174170e-48 | -8.615850e-47 |
| Msa0688270 | Msa0724210 | 0.837850 | 4.075010e-57 | -8.615850e-47 |
| Msa0688270 | Msa0731940 | 0.842624 | 2.307882e-58 | -8.615850e-47 |
| Msa0688270 | Msa0735170 | 0.833222 | 6.037552e-56 | -8.615850e-47 |
| Msa0688270 | Msa0740510 | 0.822851 | 1.898814e-53 | -8.615850e-47 |
| Msa0688270 | Msa0759410 | 0.811995 | 5.296398e-51 | -8.615850e-47 |
| Msa0688270 | Msa0760130 | 0.814728 | 1.329230e-51 | -8.615850e-47 |
| Msa0688270 | Msa0761910 | 0.802500 | 5.448335e-49 | -8.615850e-47 |
| Msa0688270 | Msa0762360 | 0.802927 | 4.446818e-49 | -8.615850e-47 |
| Msa0688270 | Msa0762970 | 0.809714 | 1.650600e-50 | -8.615850e-47 |
| Msa0688270 | Msa0764720 | 0.802396 | 5.722534e-49 | -8.615850e-47 |
| Msa0688270 | Msa0766630 | 0.844593 | 6.869857e-59 | -8.615850e-47 |
| Msa0688270 | Msa0767300 | 0.803636 | 3.171353e-49 | -8.615850e-47 |
| Msa0688270 | Msa0767740 | 0.812538 | 4.030539e-51 | -8.615850e-47 |
| Msa0688270 | Msa0768310 | 0.820438 | 6.857278e-53 | -8.615850e-47 |
| Msa0688270 | Msa0777790 | 0.818570 | 1.829429e-52 | -8.615850e-47 |
| Msa0688270 | Msa0789250 | 0.822721 | 2.035306e-53 | -8.615850e-47 |
| Msa0688270 | Msa0790510 | 0.806369 | 8.505262e-50 | -8.615850e-47 |
| Msa0688270 | Msa0802830 | 0.805595 | 1.237194e-49 | -8.615850e-47 |
| Msa0688270 | Msa0810220 | 0.829773 | 4.266764e-55 | -8.615850e-47 |
| Msa0688270 | Msa0811080 | 0.817475 | 3.234837e-52 | -8.615850e-47 |
| Msa0688270 | Msa0813400 | 0.801277 | 9.714642e-49 | -8.615850e-47 |
| Msa0688270 | Msa0817460 | 0.808445 | 3.085789e-50 | -8.615850e-47 |
| Msa0688270 | Msa0820770 | 0.824151 | 9.427301e-54 | -8.615850e-47 |
| Msa0688270 | Msa0832340 | 0.821392 | 4.137341e-53 | -8.615850e-47 |
| Msa0688270 | Msa0843260 | 0.821546 | 3.812929e-53 | -8.615850e-47 |
| Msa0688270 | Msa0844490 | 0.831632 | 1.495393e-55 | -8.615850e-47 |
| Msa0688270 | Msa0844570 | 0.800842 | 1.191898e-48 | -8.615850e-47 |
| Msa0688270 | Msa0846210 | 0.814351 | 1.610532e-51 | -8.615850e-47 |
| Msa0688270 | Msa0861090 | 0.822599 | 2.172859e-53 | -8.615850e-47 |
| Msa0688270 | Msa0870530 | 0.804025 | 2.633257e-49 | -8.615850e-47 |
| Msa0688270 | Msa0875290 | 0.823412 | 1.404956e-53 | -8.615850e-47 |
| Msa0688270 | Msa0880950 | 0.801967 | 7.013645e-49 | -8.615850e-47 |
| Msa0688270 | Msa0884670 | 0.822813 | 1.938142e-53 | -8.615850e-47 |
| Msa0688270 | Msa0885280 | 0.837527 | 4.932993e-57 | -8.615850e-47 |
| Msa0688270 | Msa0885290 | 0.803896 | 2.800304e-49 | -8.615850e-47 |
| Msa0688270 | Msa0897330 | 0.815758 | 7.843586e-52 | -8.615850e-47 |
| Msa0688270 | Msa0901400 | 0.814765 | 1.304267e-51 | -8.615850e-47 |
| Msa0688270 | Msa0907070 | 0.807626 | 4.611126e-50 | -8.615850e-47 |
| Msa0688270 | Msa0907260 | 0.821161 | 4.678490e-53 | -8.615850e-47 |
| Msa0688270 | Msa0909120 | 0.825208 | 5.313841e-54 | -8.615850e-47 |
| Msa0688270 | Msa0909140 | 0.807953 | 3.928287e-50 | -8.615850e-47 |
| Msa0688270 | Msa0918220 | 0.820064 | 8.357396e-53 | -8.615850e-47 |
| Msa0688270 | Msa0925290 | 0.820449 | 6.819898e-53 | -8.615850e-47 |
| Msa0688270 | Msa0925810 | 0.804008 | 2.654430e-49 | -8.615850e-47 |
| Msa0688270 | Msa0926890 | 0.822455 | 2.347862e-53 | -8.615850e-47 |
| Msa0688270 | Msa0927290 | 0.811060 | 8.457406e-51 | -8.615850e-47 |
| Msa0688270 | Msa0930390 | 0.802112 | 6.547538e-49 | -8.615850e-47 |
| Msa0688270 | Msa0931520 | 0.800222 | 1.594660e-48 | -8.615850e-47 |
| Msa0688270 | Msa0933100 | 0.809009 | 2.338743e-50 | -8.615850e-47 |
| Msa0688270 | Msa0935910 | 0.849811 | 2.545195e-60 | -8.615850e-47 |
| Msa0688270 | Msa0938220 | 0.831085 | 2.038535e-55 | -8.615850e-47 |
| Msa0688270 | Msa0947660 | 0.802060 | 6.709328e-49 | -8.615850e-47 |
| Msa0688270 | Msa0954910 | 0.828542 | 8.486736e-55 | -8.615850e-47 |
| Msa0688270 | Msa0956270 | 0.820508 | 6.610033e-53 | -8.615850e-47 |
| Msa0688270 | Msa0965610 | 0.833981 | 3.901406e-56 | -8.615850e-47 |
| Msa0688270 | Msa0969450 | 0.824972 | 6.040870e-54 | -8.615850e-47 |
| Msa0688270 | Msa0969520 | 0.819085 | 1.397910e-52 | -8.615850e-47 |
| Msa0688270 | Msa0974080 | 0.801361 | 9.336562e-49 | -8.615850e-47 |
| Msa0688270 | Msa0975220 | 0.825490 | 4.556853e-54 | -8.615850e-47 |
| Msa0688270 | Msa0989360 | 0.837331 | 5.535512e-57 | -8.615850e-47 |
| Msa0688270 | Msa0998690 | 0.806018 | 1.008639e-49 | -8.615850e-47 |
| Msa0688270 | Msa0999870 | 0.810623 | 1.051147e-50 | -8.615850e-47 |
| Msa0688270 | Msa1001180 | 0.814288 | 1.663092e-51 | -8.615850e-47 |
| Msa0688270 | Msa1002000 | 0.813257 | 2.805683e-51 | -8.615850e-47 |
| Msa0688270 | Msa1002850 | 0.808999 | 2.350237e-50 | -8.615850e-47 |
| Msa0688270 | Msa1003620 | 0.802424 | 5.648097e-49 | -8.615850e-47 |
| Msa0688270 | Msa1004840 | 0.805039 | 1.618158e-49 | -8.615850e-47 |
| Msa0688270 | Msa1014540 | 0.854099 | 1.541877e-61 | -8.615850e-47 |
| Msa0688270 | Msa1016320 | 0.809207 | 2.120387e-50 | -8.615850e-47 |
| Msa0688270 | Msa1019000 | 0.808133 | 3.597400e-50 | -8.615850e-47 |
| Msa0688270 | Msa1019150 | 0.812031 | 5.202851e-51 | -8.615850e-47 |
| Msa0688270 | Msa1023050 | 0.819078 | 1.402998e-52 | -8.615850e-47 |
| Msa0688270 | Msa1023950 | 0.832649 | 8.381668e-56 | -8.615850e-47 |
| Msa0688270 | Msa1035480 | 0.805683 | 1.185971e-49 | -8.615850e-47 |
| Msa0688270 | Msa1063860 | 0.810524 | 1.104189e-50 | -8.615850e-47 |
| Msa0688270 | Msa1065570 | 0.805461 | 1.320221e-49 | -8.615850e-47 |
| Msa0688270 | Msa1075220 | -0.825825 | 3.795404e-54 | -8.615850e-47 |
| Msa0688270 | Msa1075540 | 0.808957 | 2.398770e-50 | -8.615850e-47 |
| Msa0688270 | Msa1075650 | 0.820231 | 7.649318e-53 | -8.615850e-47 |
| Msa0688270 | Msa1079430 | 0.801414 | 9.104837e-49 | -8.615850e-47 |
| Msa0688270 | Msa1082500 | 0.839478 | 1.546668e-57 | -8.615850e-47 |
| Msa0688270 | Msa1083840 | 0.833800 | 4.331476e-56 | -8.615850e-47 |
| Msa0688270 | Msa1090240 | 0.801561 | 8.497942e-49 | -8.615850e-47 |
| Msa0688270 | Msa1104090 | 0.830402 | 2.997181e-55 | -8.615850e-47 |
| Msa0688270 | Msa1108070 | 0.823915 | 1.070819e-53 | -8.615850e-47 |
| Msa0688270 | Msa1113170 | 0.827375 | 1.619658e-54 | -8.615850e-47 |
| Msa0688270 | Msa1114030 | 0.811720 | 6.080819e-51 | -8.615850e-47 |
| Msa0688270 | Msa1116260 | 0.813798 | 2.132960e-51 | -8.615850e-47 |
| Msa0688270 | Msa1119480 | 0.805324 | 1.410545e-49 | -8.615850e-47 |
| Msa0688270 | Msa1121450 | -0.802596 | 5.205584e-49 | -8.615850e-47 |
| Msa0688270 | Msa1121480 | 0.827149 | 1.835037e-54 | -8.615850e-47 |
| Msa0688270 | Msa1121490 | 0.860029 | 2.745199e-63 | -8.615850e-47 |
| Msa0688270 | Msa1131220 | 0.820063 | 8.359754e-53 | -8.615850e-47 |
| Msa0688270 | Msa1135220 | 0.802647 | 5.080765e-49 | -8.615850e-47 |
| Msa0688270 | Msa1137570 | 0.804083 | 2.560848e-49 | -8.615850e-47 |
| Msa0688270 | Msa1137690 | 0.801556 | 8.518104e-49 | -8.615850e-47 |
| Msa0688270 | Msa1139000 | -0.822297 | 2.553866e-53 | -8.615850e-47 |
| Msa0688270 | Msa1142020 | 0.802160 | 6.399778e-49 | -8.615850e-47 |
| Msa0688270 | Msa1144720 | -0.804887 | 1.740806e-49 | -8.615850e-47 |
| Msa0688270 | Msa1147740 | 0.814248 | 1.696605e-51 | -8.615850e-47 |
| Msa0688270 | Msa1154280 | 0.820651 | 6.128744e-53 | -8.615850e-47 |
| Msa0688270 | Msa1158310 | 0.802172 | 6.365544e-49 | -8.615850e-47 |
| Msa0688270 | Msa1160670 | 0.822175 | 2.726374e-53 | -8.615850e-47 |
| Msa0688270 | Msa1162550 | -0.827747 | 1.318766e-54 | -8.615850e-47 |
| Msa0688270 | Msa1162780 | 0.821607 | 3.690724e-53 | -8.615850e-47 |
| Msa0688270 | Msa1163090 | 0.816338 | 5.823605e-52 | -8.615850e-47 |
| Msa0688270 | Msa1185110 | 0.806047 | 9.942903e-50 | -8.615850e-47 |
| Msa0688270 | Msa1186950 | -0.806563 | 7.739990e-50 | -8.615850e-47 |
| Msa0688270 | Msa1187940 | 0.802394 | 5.727786e-49 | -8.615850e-47 |
| Msa0688270 | Msa1187950 | 0.816005 | 6.909142e-52 | -8.615850e-47 |
| Msa0688270 | Msa1188370 | 0.805847 | 1.095569e-49 | -8.615850e-47 |
| Msa0688270 | Msa1192640 | 0.802350 | 5.848345e-49 | -8.615850e-47 |
| Msa0688270 | Msa1198400 | 0.811526 | 6.699496e-51 | -8.615850e-47 |
| Msa0688270 | Msa1207220 | 0.812130 | 4.948409e-51 | -8.615850e-47 |
| Msa0688270 | Msa1228590 | 0.820824 | 5.591630e-53 | -8.615850e-47 |
| Msa0688270 | Msa1238930 | 0.807583 | 4.709493e-50 | -8.615850e-47 |
| Msa0688270 | Msa1242220 | 0.805541 | 1.269859e-49 | -8.615850e-47 |
| Msa0688270 | Msa1246510 | 0.813520 | 2.455000e-51 | -8.615850e-47 |
| Msa0688270 | Msa1249490 | 0.820288 | 7.425427e-53 | -8.615850e-47 |
| Msa0688270 | Msa1251910 | 0.801969 | 7.004789e-49 | -8.615850e-47 |
| Msa0688270 | Msa1253000 | 0.803815 | 2.911054e-49 | -8.615850e-47 |
| Msa0688270 | Msa1269230 | 0.800167 | 1.636428e-48 | -8.615850e-47 |
| Msa0688270 | Msa1277660 | 0.819098 | 1.388004e-52 | -8.615850e-47 |
| Msa0688270 | Msa1282580 | -0.805811 | 1.114503e-49 | -8.615850e-47 |
| Msa0688270 | Msa1283860 | 0.815372 | 9.562758e-52 | -8.615850e-47 |
| Msa0688270 | Msa1284680 | 0.827808 | 1.274800e-54 | -8.615850e-47 |
| Msa0688270 | Msa1285930 | 0.818592 | 1.808444e-52 | -8.615850e-47 |
| Msa0688270 | Msa1286760 | 0.831934 | 1.259291e-55 | -8.615850e-47 |
| Msa0688270 | Msa1292570 | 0.803092 | 4.111913e-49 | -8.615850e-47 |
| Msa0688270 | Msa1296760 | 0.804923 | 1.711278e-49 | -8.615850e-47 |
| Msa0688270 | Msa1297210 | 0.803777 | 2.964763e-49 | -8.615850e-47 |
| Msa0688270 | Msa1308380 | 0.802655 | 5.060516e-49 | -8.615850e-47 |
| Msa0688270 | Msa1309030 | 0.828634 | 8.059508e-55 | -8.615850e-47 |
| Msa0688270 | Msa1313150 | 0.803442 | 3.478967e-49 | -8.615850e-47 |
| Msa0688270 | Msa1322890 | 0.817860 | 2.648415e-52 | -8.615850e-47 |
| Msa0688270 | Msa1325860 | -0.800245 | 1.577389e-48 | -8.615850e-47 |
| Msa0688270 | Msa1331000 | 0.819469 | 1.142926e-52 | -8.615850e-47 |
| Msa0688270 | Msa1343760 | 0.817635 | 2.976527e-52 | -8.615850e-47 |
| Msa0688270 | Msa1345920 | 0.809212 | 2.115875e-50 | -8.615850e-47 |
| Msa0688270 | Msa1353470 | 0.839015 | 2.039833e-57 | -8.615850e-47 |
| Msa0688270 | Msa1359040 | 0.815761 | 7.834644e-52 | -8.615850e-47 |
| Msa0688270 | Msa1366810 | 0.808067 | 3.714948e-50 | -8.615850e-47 |
| Msa0688270 | Msa1372980 | 0.817727 | 2.837706e-52 | -8.615850e-47 |
| Msa0688270 | Msa1373010 | 0.802053 | 6.732481e-49 | -8.615850e-47 |
| Msa0688270 | Msa1373030 | 0.842642 | 2.282480e-58 | -8.615850e-47 |
| Msa0688270 | Msa1374470 | 0.808703 | 2.718684e-50 | -8.615850e-47 |
| Msa0688270 | Msa1388930 | 0.807328 | 5.333044e-50 | -8.615850e-47 |
| Msa0688270 | Msa1388970 | 0.801566 | 8.477010e-49 | -8.615850e-47 |
| Msa0688270 | Msa1392240 | 0.817016 | 4.103933e-52 | -8.615850e-47 |
| Msa0688270 | Msa1392260 | 0.818059 | 2.388285e-52 | -8.615850e-47 |
| Msa0688270 | Msa1397860 | 0.829402 | 5.252977e-55 | -8.615850e-47 |
| Msa0688270 | Msa1400870 | -0.804201 | 2.420469e-49 | -8.615850e-47 |
| Msa0688270 | Msa1409880 | 0.801933 | 7.128061e-49 | -8.615850e-47 |
| Msa0688270 | Msa1410680 | 0.810497 | 1.119597e-50 | -8.615850e-47 |
| Msa0688270 | Msa1411020 | 0.801790 | 7.623760e-49 | -8.615850e-47 |
| Msa0688270 | Msa1412640 | 0.807014 | 6.214815e-50 | -8.615850e-47 |
| Msa0688270 | Msa1415910 | 0.805751 | 1.147410e-49 | -8.615850e-47 |
| Msa0688270 | Msa1419960 | 0.819877 | 9.222265e-53 | -8.615850e-47 |
| Msa0688270 | Msa1420290 | 0.814957 | 1.182524e-51 | -8.615850e-47 |
| Msa0688270 | Msa1423880 | 0.808695 | 2.729680e-50 | -8.615850e-47 |
| Msa0688270 | Msa1429900 | 0.806410 | 8.337593e-50 | -8.615850e-47 |
| Msa0688270 | Msa1433120 | 0.801534 | 8.606055e-49 | -8.615850e-47 |
| Msa0688270 | Msa1438250 | 0.837330 | 5.540527e-57 | -8.615850e-47 |
| Msa0688270 | Msa1440560 | 0.811205 | 7.865702e-51 | -8.615850e-47 |
| Msa0688270 | Msa1444440 | 0.804525 | 2.072246e-49 | -8.615850e-47 |
| Msa0688270 | Msa1451570 | 0.806406 | 8.355758e-50 | -8.615850e-47 |
| Msa0688270 | Msa1456670 | 0.815824 | 7.584061e-52 | -8.615850e-47 |
| Msa0688270 | Msa1460050 | 0.820342 | 7.215036e-53 | -8.615850e-47 |
| Msa0688270 | Msa1466540 | 0.841562 | 4.407816e-58 | -8.615850e-47 |
| Msa0688270 | Msa1467020 | 0.804988 | 1.658217e-49 | -8.615850e-47 |
| Msa0126610 | Msa0688270 | 0.809263 | 2.063064e-50 | -8.615850e-47 |
| Msa0131770 | Msa0688270 | 0.821883 | 3.186281e-53 | -8.615850e-47 |
| Msa0142220 | Msa0688270 | 0.862883 | 3.697056e-64 | -8.615850e-47 |
| Msa0153910 | Msa0688270 | 0.823415 | 1.402072e-53 | -8.615850e-47 |
| Msa0157290 | Msa0688270 | 0.805797 | 1.122271e-49 | -8.615850e-47 |
| Msa0158480 | Msa0688270 | 0.829268 | 5.660157e-55 | -8.615850e-47 |
| Msa0159930 | Msa0688270 | 0.807354 | 5.266641e-50 | -8.615850e-47 |
| Msa0165210 | Msa0688270 | 0.803657 | 3.140432e-49 | -8.615850e-47 |
| Msa0169860 | Msa0688270 | 0.801040 | 1.086268e-48 | -8.615850e-47 |
| Msa0171540 | Msa0688270 | 0.811987 | 5.318709e-51 | -8.615850e-47 |
| Msa0188460 | Msa0688270 | 0.800486 | 1.409334e-48 | -8.615850e-47 |
| Msa0188830 | Msa0688270 | 0.815733 | 7.945676e-52 | -8.615850e-47 |
| Msa0199240 | Msa0688270 | 0.805591 | 1.239569e-49 | -8.615850e-47 |
| Msa0211150 | Msa0688270 | 0.800551 | 1.366632e-48 | -8.615850e-47 |
| Msa0212990 | Msa0688270 | 0.836039 | 1.181690e-56 | -8.615850e-47 |
| Msa0213520 | Msa0688270 | 0.811753 | 5.980030e-51 | -8.615850e-47 |
| Msa0214300 | Msa0688270 | 0.846489 | 2.102928e-59 | -8.615850e-47 |
| Msa0218240 | Msa0688270 | 0.821747 | 3.425233e-53 | -8.615850e-47 |
| Msa0371730 | Msa0688270 | 0.827552 | 1.469173e-54 | -8.615850e-47 |
| Msa0381610 | Msa0688270 | -0.807205 | 5.664592e-50 | -8.615850e-47 |
| Msa0384890 | Msa0688270 | 0.814806 | 1.277006e-51 | -8.615850e-47 |
| Msa0386090 | Msa0688270 | 0.800029 | 1.745733e-48 | -8.615850e-47 |
| Msa0388960 | Msa0688270 | 0.813714 | 2.225728e-51 | -8.615850e-47 |
| Msa0390400 | Msa0688270 | -0.809441 | 1.889051e-50 | -8.615850e-47 |
| Msa0394970 | Msa0688270 | 0.800365 | 1.491657e-48 | -8.615850e-47 |
| Msa0395770 | Msa0688270 | -0.806510 | 7.943120e-50 | -8.615850e-47 |
| Msa0395790 | Msa0688270 | 0.807534 | 4.822797e-50 | -8.615850e-47 |
| Msa0397750 | Msa0688270 | 0.810844 | 9.415384e-51 | -8.615850e-47 |
| Msa0399300 | Msa0688270 | 0.818843 | 1.586393e-52 | -8.615850e-47 |
| Msa0402290 | Msa0688270 | 0.829885 | 4.008205e-55 | -8.615850e-47 |
| Msa0406120 | Msa0688270 | 0.800572 | 1.353594e-48 | -8.615850e-47 |
| Msa0407750 | Msa0688270 | 0.804034 | 2.622305e-49 | -8.615850e-47 |
| Msa0408110 | Msa0688270 | 0.800345 | 1.505586e-48 | -8.615850e-47 |
| Msa0414230 | Msa0688270 | 0.802193 | 6.299971e-49 | -8.615850e-47 |
| Msa0417080 | Msa0688270 | 0.809546 | 1.794125e-50 | -8.615850e-47 |
| Msa0417100 | Msa0688270 | 0.802696 | 4.963659e-49 | -8.615850e-47 |
| Msa0417270 | Msa0688270 | 0.800870 | 1.176436e-48 | -8.615850e-47 |
| Msa0419980 | Msa0688270 | 0.802049 | 6.744547e-49 | -8.615850e-47 |
| Msa0425170 | Msa0688270 | 0.812286 | 4.577005e-51 | -8.615850e-47 |
| Msa0426640 | Msa0688270 | 0.800386 | 1.476628e-48 | -8.615850e-47 |
| Msa0432300 | Msa0688270 | 0.819629 | 1.050508e-52 | -8.615850e-47 |
| Msa0436780 | Msa0688270 | 0.808065 | 3.719971e-50 | -8.615850e-47 |
| Msa0436800 | Msa0688270 | 0.824988 | 5.988602e-54 | -8.615850e-47 |
| Msa0437990 | Msa0688270 | 0.802425 | 5.644286e-49 | -8.615850e-47 |
| Msa0440400 | Msa0688270 | 0.806328 | 8.676260e-50 | -8.615850e-47 |
| Msa0440750 | Msa0688270 | 0.826839 | 2.176443e-54 | -8.615850e-47 |
| Msa0443260 | Msa0688270 | 0.821961 | 3.056108e-53 | -8.615850e-47 |
| Msa0453120 | Msa0688270 | 0.803703 | 3.072247e-49 | -8.615850e-47 |
| Msa0453640 | Msa0688270 | 0.822310 | 2.536666e-53 | -8.615850e-47 |
| Msa0455040 | Msa0688270 | 0.809101 | 2.235180e-50 | -8.615850e-47 |
| Msa0455760 | Msa0688270 | 0.812766 | 3.593265e-51 | -8.615850e-47 |
| Msa0457180 | Msa0688270 | 0.802217 | 6.230417e-49 | -8.615850e-47 |
| Msa0458090 | Msa0688270 | 0.818376 | 2.024199e-52 | -8.615850e-47 |
| Msa0464680 | Msa0688270 | 0.819205 | 1.312642e-52 | -8.615850e-47 |
| Msa0466120 | Msa0688270 | 0.830856 | 2.320698e-55 | -8.615850e-47 |
| Msa0469940 | Msa0688270 | -0.821020 | 5.039844e-53 | -8.615850e-47 |
| Msa0479340 | Msa0688270 | 0.827328 | 1.662013e-54 | -8.615850e-47 |
| Msa0481530 | Msa0688270 | 0.801931 | 7.132602e-49 | -8.615850e-47 |
| Msa0243890 | Msa0688270 | 0.811153 | 8.072214e-51 | -8.615850e-47 |
| Msa0267370 | Msa0688270 | 0.822371 | 2.455033e-53 | -8.615850e-47 |
| Msa0270520 | Msa0688270 | 0.805139 | 1.541964e-49 | -8.615850e-47 |
| Msa0273100 | Msa0688270 | 0.820489 | 6.674989e-53 | -8.615850e-47 |
| Msa0288100 | Msa0688270 | 0.809931 | 1.482464e-50 | -8.615850e-47 |
| Msa0290870 | Msa0688270 | 0.837945 | 3.851450e-57 | -8.615850e-47 |
| Msa0294030 | Msa0688270 | 0.803701 | 3.074221e-49 | -8.615850e-47 |
| Msa0305190 | Msa0688270 | 0.836536 | 8.833506e-57 | -8.615850e-47 |
| Msa0306210 | Msa0688270 | -0.804801 | 1.814456e-49 | -8.615850e-47 |
| Msa0309020 | Msa0688270 | 0.807830 | 4.172007e-50 | -8.615850e-47 |
| Msa0326520 | Msa0688270 | 0.822336 | 2.501494e-53 | -8.615850e-47 |
| Msa0330340 | Msa0688270 | 0.838297 | 3.127648e-57 | -8.615850e-47 |
| Msa0340450 | Msa0688270 | 0.818300 | 2.106010e-52 | -8.615850e-47 |
| Msa0340470 | Msa0688270 | 0.801710 | 7.917179e-49 | -8.615850e-47 |
| Msa0344690 | Msa0688270 | -0.823592 | 1.274805e-53 | -8.615850e-47 |
| Msa0345970 | Msa0688270 | 0.817552 | 3.108727e-52 | -8.615850e-47 |
| Msa0355220 | Msa0688270 | 0.828381 | 9.281549e-55 | -8.615850e-47 |
| Msa0357340 | Msa0688270 | 0.823407 | 1.408133e-53 | -8.615850e-47 |
| Msa0484780 | Msa0688270 | 0.815305 | 9.898067e-52 | -8.615850e-47 |
| Msa0495320 | Msa0688270 | 0.800532 | 1.378920e-48 | -8.615850e-47 |
| Msa0502340 | Msa0688270 | 0.814149 | 1.784305e-51 | -8.615850e-47 |
| Msa0512900 | Msa0688270 | 0.808045 | 3.755398e-50 | -8.615850e-47 |
| Msa0529890 | Msa0688270 | 0.814238 | 1.706070e-51 | -8.615850e-47 |
| Msa0532350 | Msa0688270 | 0.811343 | 7.341025e-51 | -8.615850e-47 |
| Msa0537500 | Msa0688270 | 0.801167 | 1.022896e-48 | -8.615850e-47 |
| Msa0538600 | Msa0688270 | 0.801936 | 7.117925e-49 | -8.615850e-47 |
| Msa0541130 | Msa0688270 | 0.833891 | 4.108872e-56 | -8.615850e-47 |
| Msa0545210 | Msa0688270 | 0.809354 | 1.972511e-50 | -8.615850e-47 |
| Msa0545850 | Msa0688270 | 0.823155 | 1.612519e-53 | -8.615850e-47 |
| Msa0571630 | Msa0688270 | 0.816416 | 5.594407e-52 | -8.615850e-47 |
| Msa0585230 | Msa0688270 | 0.809774 | 1.602753e-50 | -8.615850e-47 |
| Msa0585560 | Msa0688270 | 0.816707 | 4.814132e-52 | -8.615850e-47 |
| Msa0598160 | Msa0688270 | 0.808953 | 2.403547e-50 | -8.615850e-47 |
| Msa0598780 | Msa0688270 | 0.825459 | 4.635237e-54 | -8.615850e-47 |
| Msa0600700 | Msa0688270 | 0.851923 | 6.467666e-61 | -8.615850e-47 |
| Msa0601750 | Msa0688270 | 0.810074 | 1.381087e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0688270 | MtrunA17_Chr4g0026691 | 85.440 | 364 | 30 | 1 | 2 | 342 | 128 | 491 | 0.0 | 645 |
| Msa0688270 | MtrunA17_Chr2g0321201 | 67.857 | 364 | 93 | 2 | 2 | 342 | 130 | 492 | 0.0 | 527 |
| Msa0688270 | MtrunA17_Chr2g0321181 | 62.637 | 364 | 113 | 1 | 2 | 342 | 128 | 491 | 3.38e-173 | 490 |
| Msa0688270 | MtrunA17_Chr4g0026701 | 62.912 | 364 | 112 | 1 | 2 | 342 | 129 | 492 | 6.03e-173 | 489 |
| Msa0688270 | MtrunA17_Chr4g0026711 | 46.070 | 369 | 172 | 4 | 1 | 342 | 127 | 495 | 1.45e-113 | 338 |
| Msa0688270 | MtrunA17_Chr6g0465391 | 46.784 | 342 | 172 | 3 | 2 | 342 | 128 | 460 | 1.80e-109 | 327 |
| Msa0688270 | MtrunA17_Chr4g0026771 | 43.478 | 368 | 181 | 5 | 2 | 342 | 125 | 492 | 2.29e-107 | 322 |
| Msa0688270 | MtrunA17_Chr1g0176054 | 36.898 | 374 | 197 | 9 | 2 | 342 | 241 | 608 | 1.72e-77 | 249 |
| Msa0688270 | MtrunA17_Chr5g0419501 | 35.135 | 259 | 111 | 4 | 2 | 257 | 128 | 332 | 7.30e-46 | 159 |
| Msa0688270 | MtrunA17_Chr5g0431251 | 51.538 | 130 | 63 | 0 | 54 | 183 | 1 | 130 | 1.39e-44 | 150 |
| Msa0688270 | MtrunA17_Chr4g0026911 | 38.251 | 183 | 86 | 4 | 183 | 339 | 3 | 184 | 6.63e-37 | 131 |
| Msa0688270 | MtrunA17_Chr5g0431281 | 39.247 | 186 | 84 | 4 | 183 | 342 | 28 | 210 | 1.28e-33 | 123 |
| Msa0688270 | MtrunA17_Chr6g0465381 | 44.516 | 155 | 86 | 0 | 117 | 271 | 1 | 155 | 1.18e-30 | 114 |
| Msa0688270 | MtrunA17_Chr5g0419491 | 44.792 | 96 | 53 | 0 | 247 | 342 | 5 | 100 | 2.11e-24 | 95.5 |
| Msa0688270 | MtrunA17_Chr4g0026901 | 67.241 | 58 | 19 | 0 | 100 | 157 | 15 | 72 | 6.19e-23 | 91.3 |
| Msa0688270 | MtrunA17_Chr5g0431271 | 58.209 | 67 | 28 | 0 | 117 | 183 | 1 | 67 | 6.37e-22 | 89.7 |
| Msa0688270 | MtrunA17_Chr4g0026891 | 38.793 | 116 | 66 | 3 | 2 | 113 | 125 | 239 | 1.42e-20 | 90.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0688270 | AT4G33790.2 | 56.749 | 363 | 133 | 2 | 2 | 341 | 19 | 380 | 9.03e-156 | 442 |
| Msa0688270 | AT4G33790.1 | 56.749 | 363 | 133 | 2 | 2 | 341 | 132 | 493 | 1.59e-154 | 443 |
| Msa0688270 | AT5G22500.1 | 49.589 | 365 | 158 | 3 | 2 | 342 | 128 | 490 | 2.58e-128 | 376 |
| Msa0688270 | AT3G44540.1 | 47.123 | 365 | 169 | 2 | 2 | 342 | 128 | 492 | 4.27e-124 | 365 |
| Msa0688270 | AT3G44550.2 | 45.528 | 369 | 172 | 4 | 2 | 342 | 19 | 386 | 1.21e-112 | 333 |
| Msa0688270 | AT3G44550.1 | 45.528 | 369 | 172 | 4 | 2 | 342 | 128 | 495 | 9.13e-112 | 334 |
| Msa0688270 | AT5G22420.4 | 45.272 | 349 | 169 | 3 | 2 | 329 | 19 | 366 | 5.43e-107 | 318 |
| Msa0688270 | AT5G22420.3 | 44.986 | 349 | 170 | 3 | 2 | 329 | 3 | 350 | 2.08e-106 | 316 |
| Msa0688270 | AT5G22420.6 | 44.986 | 349 | 170 | 3 | 2 | 329 | 3 | 350 | 2.08e-106 | 316 |
| Msa0688270 | AT5G22420.1 | 44.857 | 350 | 171 | 3 | 1 | 329 | 54 | 402 | 2.30e-106 | 317 |
| Msa0688270 | AT3G44560.1 | 45.799 | 369 | 171 | 4 | 2 | 342 | 128 | 495 | 6.69e-106 | 319 |
| Msa0688270 | AT5G22500.2 | 50.365 | 274 | 130 | 3 | 2 | 275 | 128 | 395 | 1.38e-97 | 295 |
| Msa0688270 | AT5G22420.5 | 43.131 | 313 | 156 | 3 | 38 | 329 | 4 | 315 | 2.52e-88 | 268 |
| Msa0688270 | AT3G44560.3 | 46.372 | 317 | 144 | 3 | 2 | 293 | 128 | 443 | 3.20e-88 | 272 |
| Msa0688270 | AT3G44560.2 | 47.222 | 288 | 149 | 2 | 2 | 287 | 128 | 414 | 5.09e-82 | 255 |
| Msa0688270 | AT5G22420.2 | 42.088 | 297 | 150 | 3 | 54 | 329 | 1 | 296 | 2.13e-80 | 247 |
| Msa0688270 | AT5G22420.7 | 42.088 | 297 | 150 | 3 | 54 | 329 | 1 | 296 | 2.13e-80 | 247 |
| Msa0688270 | AT3G11980.1 | 36.772 | 378 | 193 | 7 | 2 | 342 | 245 | 613 | 4.26e-77 | 248 |
| Msa0688270 | AT3G44540.2 | 57.065 | 184 | 79 | 0 | 2 | 185 | 128 | 311 | 8.24e-75 | 233 |
| Msa0688270 | AT3G44540.3 | 57.065 | 184 | 79 | 0 | 2 | 185 | 128 | 311 | 8.24e-75 | 233 |
| Msa0688270 | AT3G56700.2 | 35.311 | 354 | 206 | 8 | 2 | 341 | 198 | 542 | 3.43e-64 | 213 |
| Msa0688270 | AT3G56700.1 | 32.768 | 354 | 194 | 9 | 2 | 341 | 198 | 521 | 1.85e-52 | 181 |
Find 102 sgRNAs with CRISPR-Local
Find 359 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TAATCCAGTCACACCATTTA+AGG | 0.122489 | 4_4:+53954768 | None:intergenic |
| TATAGTGATCTTCAAGAATT+TGG | 0.164039 | 4_4:-53951929 | Msa0688270:CDS |
| CTTACTTTGCCAACTTTAAC+TGG | 0.183504 | 4_4:+53951860 | None:intergenic |
| TGAAATGTAATTATCATAAT+TGG | 0.216371 | 4_4:+53950168 | None:intergenic |
| ATGTATCTCATCACTTTATA+TGG | 0.251266 | 4_4:+53950317 | None:intergenic |
| CTTGAGTTTACTGCATTCTT+TGG | 0.257472 | 4_4:+53954981 | None:intergenic |
| ATGATATATAGCAATGTTAT+TGG | 0.265763 | 4_4:+53951982 | None:intergenic |
| CTTTGGGCCTAAATACATTT+GGG | 0.284952 | 4_4:-53955026 | Msa0688270:CDS |
| CACTTGGGCCACTCCTTAAA+TGG | 0.288402 | 4_4:-53954781 | Msa0688270:CDS |
| GTTATTCTACTCCAATTCTA+TGG | 0.293474 | 4_4:-53950068 | Msa0688270:three_prime_UTR |
| ATACAGGTACGATATATCTT+TGG | 0.295271 | 4_4:-53955043 | Msa0688270:intron |
| ATTGTGTGAGTTACAAGAAT+TGG | 0.298827 | 4_4:-53954710 | Msa0688270:CDS |
| TTATGTCGTTGAAATTATAA+AGG | 0.313650 | 4_4:-53950032 | Msa0688270:three_prime_UTR |
| TCTTTGGGCCTAAATACATT+TGG | 0.315959 | 4_4:-53955027 | Msa0688270:CDS |
| TACTGTTATTTGTAGCTTGA+TGG | 0.324251 | 4_4:-53950216 | Msa0688270:three_prime_UTR |
| GTTGATTTCATCCATAGAAT+TGG | 0.325429 | 4_4:+53950057 | None:intergenic |
| TCATCCCATTTGATCACTTT+GGG | 0.332086 | 4_4:+53950394 | None:intergenic |
| GAAATCAGGGCAAAGTTATA+TGG | 0.334256 | 4_4:-53954114 | Msa0688270:intron |
| GCTTAACCCCAAATGTATTT+AGG | 0.340380 | 4_4:+53955019 | None:intergenic |
| AAGGAGTGGCCCAAGTGATA+TGG | 0.346332 | 4_4:+53954787 | None:intergenic |
| CTTACACGCCCTTGAAGAAT+AGG | 0.377248 | 4_4:+53951361 | None:intergenic |
| ATCATCCCATTTGATCACTT+TGG | 0.378754 | 4_4:+53950393 | None:intergenic |
| TTGATCCCAAAGTGATCAAA+TGG | 0.389689 | 4_4:-53950399 | Msa0688270:CDS |
| GTCGTTGAAATTATAAAGGA+TGG | 0.418698 | 4_4:-53950028 | Msa0688270:three_prime_UTR |
| TTGTGTGAGTTACAAGAATT+GGG | 0.418864 | 4_4:-53954709 | Msa0688270:CDS |
| TGATATATAGCAATGTTATT+GGG | 0.422429 | 4_4:+53951983 | None:intergenic |
| TACAGGTACGATATATCTTT+GGG | 0.428265 | 4_4:-53955042 | Msa0688270:intron |
| TTTGTGAATACATATGTGTT+TGG | 0.440627 | 4_4:+53954087 | None:intergenic |
| CAAGCCTTACCTATTCTTCA+AGG | 0.441439 | 4_4:-53951370 | Msa0688270:CDS |
| CGCTATGGCTAAACTGTCAA+TGG | 0.444646 | 4_4:+53952221 | None:intergenic |
| GTTCTTGTACATGTATCAAC+AGG | 0.445703 | 4_4:-53954958 | Msa0688270:intron |
| GGACATATCTTGATCTCAAA+AGG | 0.447953 | 4_4:-53951428 | Msa0688270:CDS |
| GACAGTTTAGCCATAGCGTA+TGG | 0.453518 | 4_4:-53952216 | Msa0688270:CDS |
| TTAATTTCAGCTTATGTATG+TGG | 0.453617 | 4_4:-53954838 | Msa0688270:intron |
| CAGAAACATATATATGAGAT+TGG | 0.454634 | 4_4:+53950116 | None:intergenic |
| TAAAGTGGCTATGAAGAACT+TGG | 0.456354 | 4_4:-53954668 | Msa0688270:CDS |
| TGAAGAACTTGGGTATTAGC+AGG | 0.463714 | 4_4:-53954657 | Msa0688270:intron |
| CCTTTCCCTGGTTGGTCCGA+AGG | 0.467556 | 4_4:-53953973 | Msa0688270:CDS |
| CTACCAACCGCATAACAATC+TGG | 0.467571 | 4_4:+53951400 | None:intergenic |
| CTGGTTGGTCCGAAGGTGTA+AGG | 0.488407 | 4_4:-53953966 | Msa0688270:intron |
| TGAAGATCACTATAAATAAG+AGG | 0.491406 | 4_4:+53951938 | None:intergenic |
| TTTCCGTCATTGTTTATCCA+TGG | 0.491926 | 4_4:+53951884 | None:intergenic |
| TGTTGATGTAGAAGAGAAAG+TGG | 0.501873 | 4_4:-53954743 | Msa0688270:CDS |
| TAATTTCAGCTTATGTATGT+GGG | 0.507232 | 4_4:-53954837 | Msa0688270:intron |
| CACTCCTTAAATGGTGTGAC+TGG | 0.507881 | 4_4:-53954772 | Msa0688270:CDS |
| GGAAAATTAACATGCTACCT+TGG | 0.510162 | 4_4:-53952189 | Msa0688270:CDS |
| TTATGATAATTACATTTCAA+AGG | 0.512088 | 4_4:-53950164 | Msa0688270:three_prime_UTR |
| AGAATGTATTTAACCACGCT+AGG | 0.516162 | 4_4:+53950349 | None:intergenic |
| TCAAAGAACCTTTCCCTGGT+TGG | 0.516289 | 4_4:-53953981 | Msa0688270:CDS |
| TATGTATTCACAAAGGCAAT+GGG | 0.525737 | 4_4:-53954078 | Msa0688270:CDS |
| AACAGATGATGAAATTAAAG+TGG | 0.529588 | 4_4:-53954683 | Msa0688270:CDS |
| GACGGAAATCCAGTTAAAGT+TGG | 0.530309 | 4_4:-53951869 | Msa0688270:CDS |
| GAATTCACCACCATGTCAGC+TGG | 0.534357 | 4_4:+53952040 | None:intergenic |
| AAAACCATACCTTACACCTT+CGG | 0.537766 | 4_4:+53953957 | None:intergenic |
| AACATTGCTATATATCATGT+TGG | 0.540257 | 4_4:-53951977 | Msa0688270:CDS |
| TTTGGGCCTAAATACATTTG+GGG | 0.542105 | 4_4:-53955025 | Msa0688270:CDS |
| TGATCCCAAAGTGATCAAAT+GGG | 0.548308 | 4_4:-53950398 | Msa0688270:CDS |
| AATGTACTAGTGACAATGGT+TGG | 0.551421 | 4_4:+53954003 | None:intergenic |
| ACATTCAAAGAACCTTTCCC+TGG | 0.552357 | 4_4:-53953985 | Msa0688270:CDS |
| GATCCAGATTGTTATGCGGT+TGG | 0.558623 | 4_4:-53951403 | Msa0688270:CDS |
| GACATTTCACAGCAAAACCA+TGG | 0.562023 | 4_4:-53951901 | Msa0688270:CDS |
| ATGTATGTGGGGAGAGAGAA+GGG | 0.563957 | 4_4:-53954825 | Msa0688270:CDS |
| GAATGTATTTAACCACGCTA+GGG | 0.565029 | 4_4:+53950350 | None:intergenic |
| CTTACACCTTCGGACCAACC+AGG | 0.565622 | 4_4:+53953967 | None:intergenic |
| TAATTAGATACCAGCTGACA+TGG | 0.568856 | 4_4:-53952050 | Msa0688270:intron |
| ATTAGAGAAACCATATCACT+TGG | 0.570492 | 4_4:-53954797 | Msa0688270:CDS |
| GGCAGCAAGACAAGGTGGGG+TGG | 0.572757 | 4_4:-53950440 | Msa0688270:CDS |
| TATGTATGTGGGGAGAGAGA+AGG | 0.577911 | 4_4:-53954826 | Msa0688270:CDS |
| TGAGATCAAGATATGTCCCT+CGG | 0.579358 | 4_4:+53951433 | None:intergenic |
| AAGCCTTACCTATTCTTCAA+GGG | 0.581203 | 4_4:-53951369 | Msa0688270:CDS |
| GAATACAGAGAAGTTGAGAA+TGG | 0.583212 | 4_4:-53950461 | Msa0688270:CDS |
| ACGCCCTTGAAGAATAGGTA+AGG | 0.583834 | 4_4:+53951366 | None:intergenic |
| ACAGTTTAGCCATAGCGTAT+GGG | 0.583955 | 4_4:-53952215 | Msa0688270:CDS |
| CAAAGAATGCAGTAAACTCA+AGG | 0.593837 | 4_4:-53954980 | Msa0688270:CDS |
| TTGAGAATGGCAGCAAGACA+AGG | 0.597493 | 4_4:-53950448 | Msa0688270:CDS |
| AAAGTGGCTATGAAGAACTT+GGG | 0.598358 | 4_4:-53954667 | Msa0688270:CDS |
| TTACACCTTCGGACCAACCA+GGG | 0.599390 | 4_4:+53953968 | None:intergenic |
| GTACTTTGTCAGTATTTCCG+AGG | 0.602173 | 4_4:-53951450 | Msa0688270:CDS |
| TTTGAATGTACTAGTGACAA+TGG | 0.602283 | 4_4:+53953999 | None:intergenic |
| AATTTCAGCTTATGTATGTG+GGG | 0.604334 | 4_4:-53954836 | Msa0688270:intron |
| ATATGTATTCACAAAGGCAA+TGG | 0.604795 | 4_4:-53954079 | Msa0688270:CDS |
| AATGGCAGCAAGACAAGGTG+GGG | 0.604900 | 4_4:-53950443 | Msa0688270:CDS |
| GAATGGCAGCAAGACAAGGT+GGG | 0.605942 | 4_4:-53950444 | Msa0688270:CDS |
| TTAGCCATAGCGTATGGGAA+AGG | 0.607515 | 4_4:-53952210 | Msa0688270:CDS |
| CCTTCGGACCAACCAGGGAA+AGG | 0.608114 | 4_4:+53953973 | None:intergenic |
| ATGCTTGTAGAGCAATTGAA+AGG | 0.608823 | 4_4:-53954051 | Msa0688270:CDS |
| TACTTTGTCAGTATTTCCGA+GGG | 0.611578 | 4_4:-53951449 | Msa0688270:CDS |
| AGAATGGCAGCAAGACAAGG+TGG | 0.614006 | 4_4:-53950445 | Msa0688270:CDS |
| TGTATTTAACCACGCTAGGG+AGG | 0.614460 | 4_4:+53950353 | None:intergenic |
| GAACATTCACCTCCCTAGCG+TGG | 0.618108 | 4_4:-53950362 | Msa0688270:CDS |
| TCAGGGCAAAGTTATATGGA+TGG | 0.619664 | 4_4:-53954110 | Msa0688270:intron |
| ATGATTTGCATGAGCTACAA+TGG | 0.629315 | 4_4:+53952006 | None:intergenic |
| TCTTAATGCAGTTGTTGATG+TGG | 0.637842 | 4_4:-53952163 | Msa0688270:intron |
| CAGTCACACCATTTAAGGAG+TGG | 0.644735 | 4_4:+53954773 | None:intergenic |
| AGAATAGGTAAGGCTTGTAG+AGG | 0.646667 | 4_4:+53951376 | None:intergenic |
| AAACCATGGATAAACAATGA+CGG | 0.657837 | 4_4:-53951887 | Msa0688270:CDS |
| AATAAGAGGTCTTCTAACAG+AGG | 0.660851 | 4_4:+53951952 | None:intergenic |
| TTAGAGAAACCATATCACTT+GGG | 0.677333 | 4_4:-53954796 | Msa0688270:CDS |
| GGAAGATCCAGATTGTTATG+CGG | 0.686875 | 4_4:-53951407 | Msa0688270:CDS |
| CAACTGCATTAAGATCTCCA+AGG | 0.697639 | 4_4:+53952172 | None:intergenic |
| AAACACATATGTATTCACAA+AGG | 0.716346 | 4_4:-53954085 | Msa0688270:CDS |
| TTAGATACCAGCTGACATGG+TGG | 0.733114 | 4_4:-53952047 | Msa0688270:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TAATATTTGAAACTATTAAA+AGG | + | chr4_4:53950452-53950471 | None:intergenic | 10.0% |
| !! | TATTAAAAGGTTTATTAATT+AGG | + | chr4_4:53950497-53950516 | None:intergenic | 10.0% |
| !! | TTAAAATAATCGATATTAAA+AGG | + | chr4_4:53950510-53950529 | None:intergenic | 10.0% |
| !! | TTAAATAGAAGAAATAAATA+TGG | + | chr4_4:53950637-53950656 | None:intergenic | 10.0% |
| !! | CTGTATATAATTAAAATAAA+AGG | + | chr4_4:53951357-53951376 | None:intergenic | 10.0% |
| !!! | CTTTTATTTTAATTATATAC+AGG | - | chr4_4:53951355-53951374 | Msa0688270:intron | 10.0% |
| !!! | TTCTATTTAAAATAAACTTA+TGG | + | chr4_4:53951984-53952003 | None:intergenic | 10.0% |
| !! | TCAAATTATAAACAAAAAAT+AGG | - | chr4_4:53952864-53952883 | Msa0688270:intron | 10.0% |
| !! | TATCTAATTATTAAAAAAAG+TGG | + | chr4_4:53954354-53954373 | None:intergenic | 10.0% |
| !!! | TTCTTCTATTTAATTTTGAA+AGG | - | chr4_4:53950644-53950663 | Msa0688270:intron | 15.0% |
| !! | GTAAATAGAAAATGATTTAA+GGG | + | chr4_4:53950818-53950837 | None:intergenic | 15.0% |
| !! | AGTAAATAGAAAATGATTTA+AGG | + | chr4_4:53950819-53950838 | None:intergenic | 15.0% |
| !!! | AGAAAAAAAAAATGATTTGT+GGG | + | chr4_4:53950877-53950896 | None:intergenic | 15.0% |
| !! | TAGAAAAAAAAAATGATTTG+TGG | + | chr4_4:53950878-53950897 | None:intergenic | 15.0% |
| !! | TATGTGAAATTGAATAAATT+TGG | - | chr4_4:53951026-53951045 | Msa0688270:intron | 15.0% |
| !!! | TATTTTGTTTTGTAGATAAT+TGG | - | chr4_4:53951082-53951101 | Msa0688270:intron | 15.0% |
| !!! | ATTTTGTTTTGTAGATAATT+GGG | - | chr4_4:53951083-53951102 | Msa0688270:intron | 15.0% |
| !! | TGAAAGAAAAAAAAATACTT+TGG | + | chr4_4:53951334-53951353 | None:intergenic | 15.0% |
| !!! | TAATATTTTTCCTAACTTTT+GGG | + | chr4_4:53951521-53951540 | None:intergenic | 15.0% |
| !!! | TTAATATTTTTCCTAACTTT+TGG | + | chr4_4:53951522-53951541 | None:intergenic | 15.0% |
| !! | AATTATATCTCAAAAACTAA+TGG | + | chr4_4:53951889-53951908 | None:intergenic | 15.0% |
| !! | TTATATATAGTGAAAAGATT+AGG | + | chr4_4:53952527-53952546 | None:intergenic | 15.0% |
| !!! | TTAAATTGTGACATTAATTT+TGG | - | chr4_4:53952634-53952653 | Msa0688270:intron | 15.0% |
| !! | ATTTGCAATAATCAAAATTT+AGG | - | chr4_4:53952708-53952727 | Msa0688270:intron | 15.0% |
| !!! | CTTTTTTTTTTTTTGCAATT+TGG | - | chr4_4:53952752-53952771 | Msa0688270:intron | 15.0% |
| !! | TCAAAAAGATCTTATAATTA+GGG | + | chr4_4:53953064-53953083 | None:intergenic | 15.0% |
| !! | TTTAATACAAATATGAACAA+AGG | + | chr4_4:53953247-53953266 | None:intergenic | 15.0% |
| !! | AAGTTAATAGCATTAATTAA+GGG | - | chr4_4:53953290-53953309 | Msa0688270:intron | 15.0% |
| !! | TATAATAAATAAGTGTATGT+AGG | + | chr4_4:53953431-53953450 | None:intergenic | 15.0% |
| !! | TAATGGAGAAATTATAATTA+GGG | + | chr4_4:53954306-53954325 | None:intergenic | 15.0% |
| !! | TTAATGGAGAAATTATAATT+AGG | + | chr4_4:53954307-53954326 | None:intergenic | 15.0% |
| !! | TTAGTCATTATAAACAATAA+AGG | + | chr4_4:53954669-53954688 | None:intergenic | 15.0% |
| !! | ATTGTTTATAATGACTAATA+TGG | - | chr4_4:53954671-53954690 | Msa0688270:CDS | 15.0% |
| !!! | TTTCTTTAGAAATTTTTACA+AGG | - | chr4_4:53954873-53954892 | Msa0688270:intron | 15.0% |
| !!! | AAAATGTCTTTAAAAGTAAT+AGG | - | chr4_4:53955338-53955357 | Msa0688270:intron | 15.0% |
| !!! | TTTTATTTTTTACCCAAAAT+TGG | + | chr4_4:53955380-53955399 | None:intergenic | 15.0% |
| !! | AAATTTAGTATCATCATTTA+TGG | - | chr4_4:53955405-53955424 | Msa0688270:intron | 15.0% |
| !! | AGGTTAAATTAAAATATAAG+TGG | - | chr4_4:53955806-53955825 | Msa0688270:intron | 15.0% |
| !! | ATATAAATCTTTATAATGTG+TGG | - | chr4_4:53956126-53956145 | Msa0688270:intron | 15.0% |
| !! | TGAAATGTAATTATCATAAT+TGG | + | chr4_4:53956249-53956268 | None:intergenic | 15.0% |
| !! | TTATGATAATTACATTTCAA+AGG | - | chr4_4:53956250-53956269 | Msa0688270:intron | 15.0% |
| !!! | AAATTAGGTTTCTGTTTTAT+TGG | - | chr4_4:53950033-53950052 | Msa0688270:three_prime_UTR | 20.0% |
| !!! | TTTCTGTTTTATTGGATTTT+TGG | - | chr4_4:53950041-53950060 | Msa0688270:three_prime_UTR | 20.0% |
| !!! | TTCTGTTTTATTGGATTTTT+GGG | - | chr4_4:53950042-53950061 | Msa0688270:three_prime_UTR | 20.0% |
| !! | ATTATTACAAGCAGAAATAT+AGG | - | chr4_4:53950161-53950180 | Msa0688270:three_prime_UTR | 20.0% |
| !!! | AATAGAAAAAAGCATATAGA+CGG | + | chr4_4:53950197-53950216 | None:intergenic | 20.0% |
| !! | ATACTATGATCAAATATTTC+CGG | - | chr4_4:53950263-53950282 | Msa0688270:three_prime_UTR | 20.0% |
| !!! | ACTTATTTTAATTTGTTTGC+CGG | + | chr4_4:53950285-53950304 | None:intergenic | 20.0% |
| !!! | TTTTAAAGAGAAAAGTTAAG+TGG | - | chr4_4:53950590-53950609 | Msa0688270:intron | 20.0% |
| !! | AAATGATTTAAGGAATTACA+AGG | + | chr4_4:53950849-53950868 | None:intergenic | 20.0% |
| !! | TTAACTATATTATCCATGTA+TGG | - | chr4_4:53950920-53950939 | Msa0688270:intron | 20.0% |
| !! | TTCACATATACAGATTAAAA+AGG | + | chr4_4:53951014-53951033 | None:intergenic | 20.0% |
| !! | AATACATATTTGATATGCAA+AGG | + | chr4_4:53951066-53951085 | None:intergenic | 20.0% |
| !! | TAAATTGCTAAAGGAAATAT+TGG | - | chr4_4:53951117-53951136 | Msa0688270:intron | 20.0% |
| !! | AAATTGCTAAAGGAAATATT+GGG | - | chr4_4:53951118-53951137 | Msa0688270:intron | 20.0% |
| !! | AAATCTTACAACATTTCTTT+CGG | - | chr4_4:53951144-53951163 | Msa0688270:intron | 20.0% |
| !! | CAAATACAAAATTTGATGAA+AGG | - | chr4_4:53951278-53951297 | Msa0688270:intron | 20.0% |
| !! | TCTTAAGCATATATATCTAA+AGG | + | chr4_4:53951926-53951945 | None:intergenic | 20.0% |
| !!! | TTTCAAAAACAGTGTTTTTT+TGG | - | chr4_4:53952021-53952040 | Msa0688270:CDS | 20.0% |
| !!! | TTCAAAAACAGTGTTTTTTT+GGG | - | chr4_4:53952022-53952041 | Msa0688270:CDS | 20.0% |
| !! | TCAAAGAAAATTGATGTATT+TGG | - | chr4_4:53952121-53952140 | Msa0688270:intron | 20.0% |
| !! | AGAATACTTGTTTAGATATT+TGG | - | chr4_4:53952206-53952225 | Msa0688270:CDS | 20.0% |
| !! | TTATTATGAACAATGAAATC+AGG | - | chr4_4:53952286-53952305 | Msa0688270:intron | 20.0% |
| !! | TATTATGAACAATGAAATCA+GGG | - | chr4_4:53952287-53952306 | Msa0688270:intron | 20.0% |
| !!! | TTTTTCACTAAATTGAGAAA+AGG | + | chr4_4:53952670-53952689 | None:intergenic | 20.0% |
| !!! | TGTTTATAATTTGAAACAGA+GGG | + | chr4_4:53952858-53952877 | None:intergenic | 20.0% |
| !!! | TTGTTTATAATTTGAAACAG+AGG | + | chr4_4:53952859-53952878 | None:intergenic | 20.0% |
| !!! | TTTTATTGCTTTCCAAAATT+TGG | + | chr4_4:53952914-53952933 | None:intergenic | 20.0% |
| !! | CTCAAAAAGATCTTATAATT+AGG | + | chr4_4:53953065-53953084 | None:intergenic | 20.0% |
| !! | TTACTAAATGTGACAAAAAA+GGG | + | chr4_4:53953167-53953186 | None:intergenic | 20.0% |
| !! | GAAGTTAATAGCATTAATTA+AGG | - | chr4_4:53953289-53953308 | Msa0688270:intron | 20.0% |
| !! | ACTTATTTATTATAGAGCAT+TGG | - | chr4_4:53953437-53953456 | Msa0688270:intron | 20.0% |
| !!! | CTTATTTATTATAGAGCATT+GGG | - | chr4_4:53953438-53953457 | Msa0688270:intron | 20.0% |
| !! | AAATTCACACAATTCATAAA+AGG | - | chr4_4:53954129-53954148 | Msa0688270:intron | 20.0% |
| !! | TATAATTAGGGATGAATAAT+TGG | + | chr4_4:53954294-53954313 | None:intergenic | 20.0% |
| !! | TGATATATAGCAATGTTATT+GGG | + | chr4_4:53954434-53954453 | None:intergenic | 20.0% |
| !! | ATGATATATAGCAATGTTAT+TGG | + | chr4_4:53954435-53954454 | None:intergenic | 20.0% |
| !! | AGTTTAAGAGTAAAAACTTT+GGG | + | chr4_4:53955220-53955239 | None:intergenic | 20.0% |
| !! | TTATATCATCTCAGAATTTA+GGG | + | chr4_4:53955667-53955686 | None:intergenic | 20.0% |
| !! | TTATGTCGTTGAAATTATAA+AGG | - | chr4_4:53956382-53956401 | Msa0688270:intron | 20.0% |
| ! | ATGACTTTCTCTTCTTATTA+AGG | + | chr4_4:53950076-53950095 | None:intergenic | 25.0% |
| !! | TATATACAACACCTCATTTT+TGG | - | chr4_4:53950107-53950126 | Msa0688270:three_prime_UTR | 25.0% |
| !!! | ATATACAACACCTCATTTTT+GGG | - | chr4_4:53950108-53950127 | Msa0688270:three_prime_UTR | 25.0% |
| ! | TAGAAGTAGTACATTACTTA+TGG | + | chr4_4:53950139-53950158 | None:intergenic | 25.0% |
| !!! | AAATATTATTTCTACTGCAG+TGG | - | chr4_4:53950464-53950483 | Msa0688270:CDS | 25.0% |
| ! | AGGAACACCATATTTATATA+TGG | - | chr4_4:53950664-53950683 | Msa0688270:intron | 25.0% |
| ! | AACAGCACCATATATAAATA+TGG | + | chr4_4:53950674-53950693 | None:intergenic | 25.0% |
| !! | GGATTTGTTTAAATTGCTAA+AGG | - | chr4_4:53951108-53951127 | Msa0688270:intron | 25.0% |
| ! | AATTGCTAAAGGAAATATTG+GGG | - | chr4_4:53951119-53951138 | Msa0688270:intron | 25.0% |
| ! | AATGTACAACAATTATTGTG+AGG | + | chr4_4:53951549-53951568 | None:intergenic | 25.0% |
| ! | TTAATTTCAGCTTATGTATG+TGG | - | chr4_4:53951576-53951595 | Msa0688270:intron | 25.0% |
| ! | TAATTTCAGCTTATGTATGT+GGG | - | chr4_4:53951577-53951596 | Msa0688270:intron | 25.0% |
| ! | AACAGATGATGAAATTAAAG+TGG | - | chr4_4:53951731-53951750 | Msa0688270:intron | 25.0% |
| ! | AAGACCTAAGTTATAGAAAT+GGG | + | chr4_4:53951861-53951880 | None:intergenic | 25.0% |
| ! | AAAGACCTAAGTTATAGAAA+TGG | + | chr4_4:53951862-53951881 | None:intergenic | 25.0% |
| ! | TTTCTATAACTTAGGTCTTT+AGG | - | chr4_4:53951862-53951881 | Msa0688270:intron | 25.0% |
| !!! | TCAAAAACAGTGTTTTTTTG+GGG | - | chr4_4:53952023-53952042 | Msa0688270:CDS | 25.0% |
| !! | GAATTTAAGACTTTGTATGT+TGG | + | chr4_4:53952054-53952073 | None:intergenic | 25.0% |
| ! | AAATCTAAACCAGTATGAAT+TGG | + | chr4_4:53952252-53952271 | None:intergenic | 25.0% |
| !!! | TCATACTGGTTTAGATTTTT+AGG | - | chr4_4:53952254-53952273 | Msa0688270:intron | 25.0% |
| ! | TTTGTGAATACATATGTGTT+TGG | + | chr4_4:53952330-53952349 | None:intergenic | 25.0% |
| ! | AAACACATATGTATTCACAA+AGG | - | chr4_4:53952329-53952348 | Msa0688270:intron | 25.0% |
| ! | CAAAGACTAAATTGTGAAAA+AGG | + | chr4_4:53952609-53952628 | None:intergenic | 25.0% |
| ! | CAATAATCAAAATTTAGGTC+TGG | - | chr4_4:53952713-53952732 | Msa0688270:intron | 25.0% |
| ! | TTGGTTACGTACTTATATAT+TGG | - | chr4_4:53952771-53952790 | Msa0688270:intron | 25.0% |
| ! | AAATAGGTTAAGAACAATTG+AGG | - | chr4_4:53952880-53952899 | Msa0688270:intron | 25.0% |
| !!! | GAGGTATTTTATCCAAATTT+TGG | - | chr4_4:53952899-53952918 | Msa0688270:intron | 25.0% |
| ! | AAAGATCTTATAATTAGGGA+TGG | + | chr4_4:53953060-53953079 | None:intergenic | 25.0% |
| ! | ACAAAGGGATCTTATAAAAA+GGG | + | chr4_4:53953099-53953118 | None:intergenic | 25.0% |
| ! | AACAAAGGGATCTTATAAAA+AGG | + | chr4_4:53953100-53953119 | None:intergenic | 25.0% |
| ! | ATGTAGTTGGAAATAACAAA+GGG | + | chr4_4:53953114-53953133 | None:intergenic | 25.0% |
| ! | AATGTAGTTGGAAATAACAA+AGG | + | chr4_4:53953115-53953134 | None:intergenic | 25.0% |
| ! | TACTAAATGTGACAAAAAAG+GGG | + | chr4_4:53953166-53953185 | None:intergenic | 25.0% |
| ! | CTTACTAAATGTGACAAAAA+AGG | + | chr4_4:53953168-53953187 | None:intergenic | 25.0% |
| ! | GCATCTAGTAATTAGTATAA+AGG | - | chr4_4:53953340-53953359 | Msa0688270:intron | 25.0% |
| !!! | TCAAAGAGTGCTTATAATTA+GGG | - | chr4_4:53953389-53953408 | Msa0688270:intron | 25.0% |
| ! | TTGGATAGAAGATTATTGAA+GGG | + | chr4_4:53953726-53953745 | None:intergenic | 25.0% |
| ! | AATAATCTTCTATCCAAGTT+GGG | - | chr4_4:53953729-53953748 | Msa0688270:intron | 25.0% |
| ! | TGATGAGACTAGAAAATTAA+TGG | + | chr4_4:53954323-53954342 | None:intergenic | 25.0% |
| ! | AACATTGCTATATATCATGT+TGG | - | chr4_4:53954437-53954456 | Msa0688270:intron | 25.0% |
| ! | TGAAGATCACTATAAATAAG+AGG | + | chr4_4:53954479-53954498 | None:intergenic | 25.0% |
| ! | TATAGTGATCTTCAAGAATT+TGG | - | chr4_4:53954485-53954504 | Msa0688270:intron | 25.0% |
| ! | TAGAAACCTTTAACAAAAGA+AGG | + | chr4_4:53954628-53954647 | None:intergenic | 25.0% |
| !!! | ACTAATATGGTTTTAAATCG+CGG | - | chr4_4:53954684-53954703 | Msa0688270:CDS | 25.0% |
| ! | TACTACAAGTCATTATATTG+TGG | - | chr4_4:53954716-53954735 | Msa0688270:CDS | 25.0% |
| ! | CATTATATTGTGGCAAAATA+CGG | - | chr4_4:53954726-53954745 | Msa0688270:CDS | 25.0% |
| ! | ATTGCAATTTCGATTGTATT+AGG | + | chr4_4:53954762-53954781 | None:intergenic | 25.0% |
| !! | TCGTCATATAAATGATTTTG+TGG | + | chr4_4:53954802-53954821 | None:intergenic | 25.0% |
| ! | CTAAAGAAAAAATTGAGTGA+TGG | + | chr4_4:53954862-53954881 | None:intergenic | 25.0% |
| !!! | CTCATCTAATTTTTTGCATT+TGG | - | chr4_4:53954917-53954936 | Msa0688270:intron | 25.0% |
| !!! | TCTAATTTTTTGCATTTGGT+AGG | - | chr4_4:53954921-53954940 | Msa0688270:intron | 25.0% |
| !!! | CTAATTTTTTGCATTTGGTA+GGG | - | chr4_4:53954922-53954941 | Msa0688270:intron | 25.0% |
| ! | TTTGTCATGCTAAAATAAGT+AGG | + | chr4_4:53955155-53955174 | None:intergenic | 25.0% |
| ! | GTTTAAGAGTAAAAACTTTG+GGG | + | chr4_4:53955219-53955238 | None:intergenic | 25.0% |
| ! | GAGTTTAAGAGTAAAAACTT+TGG | + | chr4_4:53955221-53955240 | None:intergenic | 25.0% |
| ! | TGCATTTGCATCAAAAAAAT+TGG | - | chr4_4:53955561-53955580 | Msa0688270:intron | 25.0% |
| ! | CTTATATCATCTCAGAATTT+AGG | + | chr4_4:53955668-53955687 | None:intergenic | 25.0% |
| ! | CATATTTATCACCTAATACT+GGG | + | chr4_4:53955739-53955758 | None:intergenic | 25.0% |
| ! | ACATATTTATCACCTAATAC+TGG | + | chr4_4:53955740-53955759 | None:intergenic | 25.0% |
| !!! | TTTGATGGGTTGATTAATTA+AGG | - | chr4_4:53955786-53955805 | Msa0688270:intron | 25.0% |
| ! | ATATCTGTCTAGCTATTATT+AGG | - | chr4_4:53955844-53955863 | Msa0688270:intron | 25.0% |
| ! | TTATTAGGTTATGTATCATG+AGG | - | chr4_4:53955859-53955878 | Msa0688270:intron | 25.0% |
| ! | ATGTATCTCATCACTTTATA+TGG | + | chr4_4:53956100-53956119 | None:intergenic | 25.0% |
| ! | CAGAAACATATATATGAGAT+TGG | + | chr4_4:53956301-53956320 | None:intergenic | 25.0% |
| !! | AATGAGGTGTTGTATATATG+TGG | + | chr4_4:53950105-53950124 | None:intergenic | 30.0% |
| GACGTCTGACATAATAATAT+TGG | - | chr4_4:53950388-53950407 | Msa0688270:CDS | 30.0% | |
| GTGGGATAGAAAATGATTTA+AGG | + | chr4_4:53950859-53950878 | None:intergenic | 30.0% | |
| GCAATATAGATAACCATACA+TGG | + | chr4_4:53950936-53950955 | None:intergenic | 30.0% | |
| ! | TGTTTTGTAGATAATTGGGA+AGG | - | chr4_4:53951087-53951106 | Msa0688270:intron | 30.0% |
| ATTGCTAAAGGAAATATTGG+GGG | - | chr4_4:53951120-53951139 | Msa0688270:intron | 30.0% | |
| ACTGGAAGATTCTATTCTAA+AGG | - | chr4_4:53951213-53951232 | Msa0688270:intron | 30.0% | |
| ATACAGGTACGATATATCTT+TGG | - | chr4_4:53951371-53951390 | Msa0688270:CDS | 30.0% | |
| TACAGGTACGATATATCTTT+GGG | - | chr4_4:53951372-53951391 | Msa0688270:CDS | 30.0% | |
| CAATATCAATCCCAAAAGTT+AGG | - | chr4_4:53951508-53951527 | Msa0688270:intron | 30.0% | |
| AATTTCAGCTTATGTATGTG+GGG | - | chr4_4:53951578-53951597 | Msa0688270:intron | 30.0% | |
| ATTAGAGAAACCATATCACT+TGG | - | chr4_4:53951617-53951636 | Msa0688270:intron | 30.0% | |
| TTAGAGAAACCATATCACTT+GGG | - | chr4_4:53951618-53951637 | Msa0688270:intron | 30.0% | |
| ATTGTGTGAGTTACAAGAAT+TGG | - | chr4_4:53951704-53951723 | Msa0688270:intron | 30.0% | |
| TTGTGTGAGTTACAAGAATT+GGG | - | chr4_4:53951705-53951724 | Msa0688270:intron | 30.0% | |
| GGGCTTAAATAACATAACTA+TGG | + | chr4_4:53951828-53951847 | None:intergenic | 30.0% | |
| ! | TAAGACTTTGTATGTTGGTT+TGG | + | chr4_4:53952049-53952068 | None:intergenic | 30.0% |
| ! | TACGGAGAATATCTTTTGTT+TGG | + | chr4_4:53952079-53952098 | None:intergenic | 30.0% |
| GTATGAATTGGAATTTAAGG+TGG | + | chr4_4:53952240-53952259 | None:intergenic | 30.0% | |
| CCAGTATGAATTGGAATTTA+AGG | + | chr4_4:53952243-53952262 | None:intergenic | 30.0% | |
| CCTTAAATTCCAATTCATAC+TGG | - | chr4_4:53952240-53952259 | Msa0688270:intron | 30.0% | |
| ATATGTATTCACAAAGGCAA+TGG | - | chr4_4:53952335-53952354 | Msa0688270:intron | 30.0% | |
| TATGTATTCACAAAGGCAAT+GGG | - | chr4_4:53952336-53952355 | Msa0688270:intron | 30.0% | |
| TTTGAATGTACTAGTGACAA+TGG | + | chr4_4:53952418-53952437 | None:intergenic | 30.0% | |
| TCTCTTCCTATATTCTTTCT+CGG | - | chr4_4:53952951-53952970 | Msa0688270:intron | 30.0% | |
| ATGATACCGAGAAAGAATAT+AGG | + | chr4_4:53952960-53952979 | None:intergenic | 30.0% | |
| TGAAAGAAACCGTTGAAAAT+AGG | - | chr4_4:53953004-53953023 | Msa0688270:intron | 30.0% | |
| GAAAGAAACCGTTGAAAATA+GGG | - | chr4_4:53953005-53953024 | Msa0688270:intron | 30.0% | |
| !! | CTCAAAGAGTGCTTATAATT+AGG | - | chr4_4:53953388-53953407 | Msa0688270:intron | 30.0% |
| CAACTATGTGAATTGCATTT+AGG | + | chr4_4:53953554-53953573 | None:intergenic | 30.0% | |
| CTTGGATAGAAGATTATTGA+AGG | + | chr4_4:53953727-53953746 | None:intergenic | 30.0% | |
| CAATAATCTTCTATCCAAGT+TGG | - | chr4_4:53953728-53953747 | Msa0688270:intron | 30.0% | |
| ATAATCTTCTATCCAAGTTG+GGG | - | chr4_4:53953730-53953749 | Msa0688270:intron | 30.0% | |
| TTACTTGTACCACAAGTAAT+AGG | + | chr4_4:53953830-53953849 | None:intergenic | 30.0% | |
| !!! | AACTTTTTTTTTGTGGTGGT+CGG | + | chr4_4:53954085-53954104 | None:intergenic | 30.0% |
| !!! | TGATCGCAACTTTTTTTTTG+TGG | + | chr4_4:53954092-53954111 | None:intergenic | 30.0% |
| AAACCATGGATAAACAATGA+CGG | - | chr4_4:53954527-53954546 | Msa0688270:intron | 30.0% | |
| !! | AGTAAGAGTGTTTAGTAACA+TGG | - | chr4_4:53954571-53954590 | Msa0688270:intron | 30.0% |
| CCTTTAACAAAAGAAGGTAA+CGG | + | chr4_4:53954622-53954641 | None:intergenic | 30.0% | |
| AATTGCAATTGATACCGTTA+TGG | - | chr4_4:53954773-53954792 | Msa0688270:CDS | 30.0% | |
| AGGCATATCTATTCAAACAT+GGG | + | chr4_4:53955135-53955154 | None:intergenic | 30.0% | |
| TAGGCATATCTATTCAAACA+TGG | + | chr4_4:53955136-53955155 | None:intergenic | 30.0% | |
| TCAACCACTTATTAGTATTG+GGG | + | chr4_4:53955282-53955301 | None:intergenic | 30.0% | |
| GTCAACCACTTATTAGTATT+GGG | + | chr4_4:53955283-53955302 | None:intergenic | 30.0% | |
| TGTCAACCACTTATTAGTAT+TGG | + | chr4_4:53955284-53955303 | None:intergenic | 30.0% | |
| !! | AAAATTGGCTTGTAAGGTAA+TGG | + | chr4_4:53955365-53955384 | None:intergenic | 30.0% |
| ! | ATTACCTTACAAGCCAATTT+TGG | - | chr4_4:53955364-53955383 | Msa0688270:intron | 30.0% |
| ! | TTACCTTACAAGCCAATTTT+GGG | - | chr4_4:53955365-53955384 | Msa0688270:intron | 30.0% |
| !! | TTTTATTTATGCGCTTCAGT+TGG | + | chr4_4:53955526-53955545 | None:intergenic | 30.0% |
| TGTGCATTATCATTACAACA+CGG | - | chr4_4:53955762-53955781 | Msa0688270:intron | 30.0% | |
| ! | TACTGTTATTTGTAGCTTGA+TGG | - | chr4_4:53956198-53956217 | Msa0688270:intron | 30.0% |
| GTTATTCTACTCCAATTCTA+TGG | - | chr4_4:53956346-53956365 | Msa0688270:intron | 30.0% | |
| ! | GTTGATTTCATCCATAGAAT+TGG | + | chr4_4:53956360-53956379 | None:intergenic | 30.0% |
| GTCGTTGAAATTATAAAGGA+TGG | - | chr4_4:53956386-53956405 | Msa0688270:intron | 30.0% | |
| TATGGATATGCCCAAAAATG+AGG | + | chr4_4:53950121-53950140 | None:intergenic | 35.0% | |
| ATAAACTCACACACAAGTGT+AGG | - | chr4_4:53950341-53950360 | Msa0688270:exon | 35.0% | |
| ! | AAAAGTTGACTCTAGTACCT+GGG | - | chr4_4:53951167-53951186 | Msa0688270:intron | 35.0% |
| GACATTTCTCTTGAAGACTT+GGG | - | chr4_4:53951190-53951209 | Msa0688270:intron | 35.0% | |
| TCTTTGGGCCTAAATACATT+TGG | - | chr4_4:53951387-53951406 | Msa0688270:CDS | 35.0% | |
| CTTTGGGCCTAAATACATTT+GGG | - | chr4_4:53951388-53951407 | Msa0688270:CDS | 35.0% | |
| TTTGGGCCTAAATACATTTG+GGG | - | chr4_4:53951389-53951408 | Msa0688270:CDS | 35.0% | |
| GCTTAACCCCAAATGTATTT+AGG | + | chr4_4:53951398-53951417 | None:intergenic | 35.0% | |
| CTTGAGTTTACTGCATTCTT+TGG | + | chr4_4:53951436-53951455 | None:intergenic | 35.0% | |
| CAAAGAATGCAGTAAACTCA+AGG | - | chr4_4:53951434-53951453 | Msa0688270:CDS | 35.0% | |
| GTTCTTGTACATGTATCAAC+AGG | - | chr4_4:53951456-53951475 | Msa0688270:CDS | 35.0% | |
| TAATCCAGTCACACCATTTA+AGG | + | chr4_4:53951649-53951668 | None:intergenic | 35.0% | |
| TGTTGATGTAGAAGAGAAAG+TGG | - | chr4_4:53951671-53951690 | Msa0688270:intron | 35.0% | |
| TAAAGTGGCTATGAAGAACT+TGG | - | chr4_4:53951746-53951765 | Msa0688270:intron | 35.0% | |
| AAAGTGGCTATGAAGAACTT+GGG | - | chr4_4:53951747-53951766 | Msa0688270:intron | 35.0% | |
| TAGAAATGGGTGTCTATTGT+GGG | + | chr4_4:53951848-53951867 | None:intergenic | 35.0% | |
| ATAGAAATGGGTGTCTATTG+TGG | + | chr4_4:53951849-53951868 | None:intergenic | 35.0% | |
| GACACCCATTTCTATAACTT+AGG | - | chr4_4:53951854-53951873 | Msa0688270:intron | 35.0% | |
| !! | GGAGAATATCTTTTGTTTGG+TGG | + | chr4_4:53952076-53952095 | None:intergenic | 35.0% |
| GAAATCAGGGCAAAGTTATA+TGG | - | chr4_4:53952300-53952319 | Msa0688270:intron | 35.0% | |
| ATGCTTGTAGAGCAATTGAA+AGG | - | chr4_4:53952363-53952382 | Msa0688270:intron | 35.0% | |
| AATGTACTAGTGACAATGGT+TGG | + | chr4_4:53952414-53952433 | None:intergenic | 35.0% | |
| AAAACCATACCTTACACCTT+CGG | + | chr4_4:53952460-53952479 | None:intergenic | 35.0% | |
| ! | GTTCAACACCCTATTTTCAA+CGG | + | chr4_4:53953016-53953035 | None:intergenic | 35.0% |
| !! | GAAAATAGGGTGTTGAACTT+TGG | - | chr4_4:53953018-53953037 | Msa0688270:intron | 35.0% |
| GATCTTATAATTAGGGATGG+AGG | + | chr4_4:53953057-53953076 | None:intergenic | 35.0% | |
| GACGGAGTAATAAATGTAGT+TGG | + | chr4_4:53953127-53953146 | None:intergenic | 35.0% | |
| AAGGGGCTTATATATAGAGA+CGG | + | chr4_4:53953149-53953168 | None:intergenic | 35.0% | |
| ! | AGAGTGCTTATAATTAGGGA+CGG | - | chr4_4:53953393-53953412 | Msa0688270:intron | 35.0% |
| ATTGTCATATAGTCAGAGAG+AGG | - | chr4_4:53953616-53953635 | Msa0688270:intron | 35.0% | |
| TTGTCATATAGTCAGAGAGA+GGG | - | chr4_4:53953617-53953636 | Msa0688270:intron | 35.0% | |
| !! | ACTTGATCTTTTGAGGAAAC+TGG | + | chr4_4:53953669-53953688 | None:intergenic | 35.0% |
| GAAGCAAAGACTTTGTGAAA+AGG | + | chr4_4:53953698-53953717 | None:intergenic | 35.0% | |
| AGAAGATTATTGAAGGGTTG+AGG | + | chr4_4:53953720-53953739 | None:intergenic | 35.0% | |
| AATGATAATCATCCCCAACT+TGG | + | chr4_4:53953745-53953764 | None:intergenic | 35.0% | |
| !! | CTCTATTGGTTGACATTTTC+TGG | + | chr4_4:53953799-53953818 | None:intergenic | 35.0% |
| AATAGGTGTCTCTTCTCTAT+TGG | + | chr4_4:53953813-53953832 | None:intergenic | 35.0% | |
| TAGGGACAATGCATAATGTA+TGG | - | chr4_4:53954040-53954059 | Msa0688270:CDS | 35.0% | |
| GACAATGCATAATGTATGGA+AGG | - | chr4_4:53954044-53954063 | Msa0688270:CDS | 35.0% | |
| !!! | ACTTTTTTTTTGTGGTGGTC+GGG | + | chr4_4:53954084-53954103 | None:intergenic | 35.0% |
| !!! | TCGCAACTTTTTTTTTGTGG+TGG | + | chr4_4:53954089-53954108 | None:intergenic | 35.0% |
| GGAAAATTAACATGCTACCT+TGG | - | chr4_4:53954225-53954244 | Msa0688270:intron | 35.0% | |
| TCTTAATGCAGTTGTTGATG+TGG | - | chr4_4:53954251-53954270 | Msa0688270:intron | 35.0% | |
| ! | GGGATGAATAATTGGTTTCA+TGG | + | chr4_4:53954286-53954305 | None:intergenic | 35.0% |
| TAATTAGATACCAGCTGACA+TGG | - | chr4_4:53954364-53954383 | Msa0688270:intron | 35.0% | |
| ! | ATGATTTGCATGAGCTACAA+TGG | + | chr4_4:53954411-53954430 | None:intergenic | 35.0% |
| AATAAGAGGTCTTCTAACAG+AGG | + | chr4_4:53954465-53954484 | None:intergenic | 35.0% | |
| TTTCCGTCATTGTTTATCCA+TGG | + | chr4_4:53954533-53954552 | None:intergenic | 35.0% | |
| CTTACTTTGCCAACTTTAAC+TGG | + | chr4_4:53954557-53954576 | None:intergenic | 35.0% | |
| ! | CCGTTACCTTCTTTTGTTAA+AGG | - | chr4_4:53954619-53954638 | Msa0688270:intron | 35.0% |
| ! | TGATTTTGTGGTCTCCATAA+CGG | + | chr4_4:53954790-53954809 | None:intergenic | 35.0% |
| ! | GTAATCATCGCTTTAAATCG+CGG | + | chr4_4:53954832-53954851 | None:intergenic | 35.0% |
| TACTTTGTCAGTATTTCCGA+GGG | - | chr4_4:53954965-53954984 | Msa0688270:CDS | 35.0% | |
| GGACATATCTTGATCTCAAA+AGG | - | chr4_4:53954986-53955005 | Msa0688270:CDS | 35.0% | |
| AAGCCTTACCTATTCTTCAA+GGG | - | chr4_4:53955045-53955064 | Msa0688270:intron | 35.0% | |
| GGCATATCTATTCAAACATG+GGG | + | chr4_4:53955134-53955153 | None:intergenic | 35.0% | |
| ! | AACCACTTATTAGTATTGGG+GGG | + | chr4_4:53955280-53955299 | None:intergenic | 35.0% |
| ! | CAACCACTTATTAGTATTGG+GGG | + | chr4_4:53955281-53955300 | None:intergenic | 35.0% |
| !! | TTACCCAAAATTGGCTTGTA+AGG | + | chr4_4:53955371-53955390 | None:intergenic | 35.0% |
| GACGTTATTAGCATCAGAAA+TGG | - | chr4_4:53955594-53955613 | Msa0688270:intron | 35.0% | |
| ACATTATGTCACCCAGTATT+AGG | - | chr4_4:53955725-53955744 | Msa0688270:intron | 35.0% | |
| !! | TCATTACAACACGGTTTTGA+TGG | - | chr4_4:53955771-53955790 | Msa0688270:intron | 35.0% |
| !! | CATTACAACACGGTTTTGAT+GGG | - | chr4_4:53955772-53955791 | Msa0688270:intron | 35.0% |
| GAATACAGAGAAGTTGAGAA+TGG | - | chr4_4:53955953-53955972 | Msa0688270:intron | 35.0% | |
| TTGATCCCAAAGTGATCAAA+TGG | - | chr4_4:53956015-53956034 | Msa0688270:intron | 35.0% | |
| TGATCCCAAAGTGATCAAAT+GGG | - | chr4_4:53956016-53956035 | Msa0688270:intron | 35.0% | |
| TCATCCCATTTGATCACTTT+GGG | + | chr4_4:53956023-53956042 | None:intergenic | 35.0% | |
| ATCATCCCATTTGATCACTT+TGG | + | chr4_4:53956024-53956043 | None:intergenic | 35.0% | |
| GAATGTATTTAACCACGCTA+GGG | + | chr4_4:53956067-53956086 | None:intergenic | 35.0% | |
| AGAATGTATTTAACCACGCT+AGG | + | chr4_4:53956068-53956087 | None:intergenic | 35.0% | |
| GAGGTGTGTGTTGTGAAATT+AGG | - | chr4_4:53950018-53950037 | Msa0688270:three_prime_UTR | 40.0% | |
| CTTCGCTTGCAAAATCATAG+TGG | + | chr4_4:53950759-53950778 | None:intergenic | 40.0% | |
| ! | GAAAAGTTGACTCTAGTACC+TGG | - | chr4_4:53951166-53951185 | Msa0688270:intron | 40.0% |
| ! | AAAGTTGACTCTAGTACCTG+GGG | - | chr4_4:53951168-53951187 | Msa0688270:intron | 40.0% |
| GGACATTTCTCTTGAAGACT+TGG | - | chr4_4:53951189-53951208 | Msa0688270:intron | 40.0% | |
| TGAAGAACTTGGGTATTAGC+AGG | - | chr4_4:53951757-53951776 | Msa0688270:intron | 40.0% | |
| TCAGGGCAAAGTTATATGGA+TGG | - | chr4_4:53952304-53952323 | Msa0688270:intron | 40.0% | |
| ACATTCAAAGAACCTTTCCC+TGG | - | chr4_4:53952429-53952448 | Msa0688270:intron | 40.0% | |
| GGCTTATATATAGAGACGGA+CGG | + | chr4_4:53953145-53953164 | None:intergenic | 40.0% | |
| CAACTTCATGTGAAATGCAG+TGG | - | chr4_4:53953463-53953482 | Msa0688270:intron | 40.0% | |
| TTGTGCGTTTACGGAATTCA+CGG | + | chr4_4:53953581-53953600 | None:intergenic | 40.0% | |
| CCAAATGCTTTGTGCGTTTA+CGG | + | chr4_4:53953590-53953609 | None:intergenic | 40.0% | |
| ! | GTTCGCTACTTGATCTTTTG+AGG | + | chr4_4:53953676-53953695 | None:intergenic | 40.0% |
| ATTTACCAACCTCCAACTTG+TGG | - | chr4_4:53953762-53953781 | Msa0688270:intron | 40.0% | |
| TTTACCAACCTCCAACTTGT+GGG | - | chr4_4:53953763-53953782 | Msa0688270:intron | 40.0% | |
| GAAGAGACACCTATTACTTG+TGG | - | chr4_4:53953818-53953837 | Msa0688270:intron | 40.0% | |
| ! | TGAGCTTAACTCAGTTGGTA+GGG | - | chr4_4:53954022-53954041 | Msa0688270:CDS | 40.0% |
| TGCATAATGTATGGAAGGTC+CGG | - | chr4_4:53954049-53954068 | Msa0688270:CDS | 40.0% | |
| !!! | CTTTTTTTTTGTGGTGGTCG+GGG | + | chr4_4:53954083-53954102 | None:intergenic | 40.0% |
| ! | TGCGTGTGCTTGTTAATTAC+AGG | - | chr4_4:53954169-53954188 | Msa0688270:intron | 40.0% |
| ACAGTTTAGCCATAGCGTAT+GGG | - | chr4_4:53954199-53954218 | Msa0688270:intron | 40.0% | |
| ! | TTTTCCTTTCCCATACGCTA+TGG | + | chr4_4:53954211-53954230 | None:intergenic | 40.0% |
| CAACTGCATTAAGATCTCCA+AGG | + | chr4_4:53954245-53954264 | None:intergenic | 40.0% | |
| GACATTTCACAGCAAAACCA+TGG | - | chr4_4:53954513-53954532 | Msa0688270:intron | 40.0% | |
| GACGGAAATCCAGTTAAAGT+TGG | - | chr4_4:53954545-53954564 | Msa0688270:intron | 40.0% | |
| GTACTTTGTCAGTATTTCCG+AGG | - | chr4_4:53954964-53954983 | Msa0688270:CDS | 40.0% | |
| TGAGATCAAGATATGTCCCT+CGG | + | chr4_4:53954984-53955003 | None:intergenic | 40.0% | |
| GGAAGATCCAGATTGTTATG+CGG | - | chr4_4:53955007-53955026 | Msa0688270:CDS | 40.0% | |
| AGAATAGGTAAGGCTTGTAG+AGG | + | chr4_4:53955041-53955060 | None:intergenic | 40.0% | |
| CAAGCCTTACCTATTCTTCA+AGG | - | chr4_4:53955044-53955063 | Msa0688270:intron | 40.0% | |
| ATCCCCCCAATACTAATAAG+TGG | - | chr4_4:53955275-53955294 | Msa0688270:intron | 40.0% | |
| TCACACACAAGTGTAGGTGT+TGG | - | chr4_4:53950347-53950366 | Msa0688270:CDS | 45.0% | |
| CACACACAAGTGTAGGTGTT+GGG | - | chr4_4:53950348-53950367 | Msa0688270:CDS | 45.0% | |
| TATGTCAGACGTCGTAACCA+GGG | + | chr4_4:53950381-53950400 | None:intergenic | 45.0% | |
| TTATGTCAGACGTCGTAACC+AGG | + | chr4_4:53950382-53950401 | None:intergenic | 45.0% | |
| TCTTCAAGAGAAATGTCCCC+AGG | + | chr4_4:53951187-53951206 | None:intergenic | 45.0% | |
| TTCTCTTGAAGACTTGGGAC+TGG | - | chr4_4:53951195-53951214 | Msa0688270:intron | 45.0% | |
| TATGTATGTGGGGAGAGAGA+AGG | - | chr4_4:53951588-53951607 | Msa0688270:intron | 45.0% | |
| ATGTATGTGGGGAGAGAGAA+GGG | - | chr4_4:53951589-53951608 | Msa0688270:intron | 45.0% | |
| CAGTCACACCATTTAAGGAG+TGG | + | chr4_4:53951644-53951663 | None:intergenic | 45.0% | |
| CACTCCTTAAATGGTGTGAC+TGG | - | chr4_4:53951642-53951661 | Msa0688270:intron | 45.0% | |
| TCAAAGAACCTTTCCCTGGT+TGG | - | chr4_4:53952433-53952452 | Msa0688270:intron | 45.0% | |
| ! | CCGTAAACGCACAAAGCATT+TGG | - | chr4_4:53953587-53953606 | Msa0688270:intron | 45.0% |
| TTACCAACCTCCAACTTGTG+GGG | - | chr4_4:53953764-53953783 | Msa0688270:intron | 45.0% | |
| ACTCGTGAGCTTAACTCAGT+TGG | - | chr4_4:53954017-53954036 | Msa0688270:CDS | 45.0% | |
| GTGAGCTTAACTCAGTTGGT+AGG | - | chr4_4:53954021-53954040 | Msa0688270:CDS | 45.0% | |
| GCATAATGTATGGAAGGTCC+GGG | - | chr4_4:53954050-53954069 | Msa0688270:CDS | 45.0% | |
| CATAATGTATGGAAGGTCCG+GGG | - | chr4_4:53954051-53954070 | Msa0688270:CDS | 45.0% | |
| CGCTATGGCTAAACTGTCAA+TGG | + | chr4_4:53954196-53954215 | None:intergenic | 45.0% | |
| GACAGTTTAGCCATAGCGTA+TGG | - | chr4_4:53954198-53954217 | Msa0688270:intron | 45.0% | |
| TTAGCCATAGCGTATGGGAA+AGG | - | chr4_4:53954204-53954223 | Msa0688270:intron | 45.0% | |
| ATGCAGTTGTTGATGTGGTG+AGG | - | chr4_4:53954256-53954275 | Msa0688270:intron | 45.0% | |
| TTAGATACCAGCTGACATGG+TGG | - | chr4_4:53954367-53954386 | Msa0688270:intron | 45.0% | |
| GATCCAGATTGTTATGCGGT+TGG | - | chr4_4:53955011-53955030 | Msa0688270:CDS | 45.0% | |
| CTACCAACCGCATAACAATC+TGG | + | chr4_4:53955017-53955036 | None:intergenic | 45.0% | |
| ACGCCCTTGAAGAATAGGTA+AGG | + | chr4_4:53955051-53955070 | None:intergenic | 45.0% | |
| CTTACACGCCCTTGAAGAAT+AGG | + | chr4_4:53955056-53955075 | None:intergenic | 45.0% | |
| !! | GTGGTCTTATGGATCTTGGA+TGG | + | chr4_4:53955694-53955713 | None:intergenic | 45.0% |
| !! | GTAGGTGGTCTTATGGATCT+TGG | + | chr4_4:53955698-53955717 | None:intergenic | 45.0% |
| TCCATAAGACCACCTACTGA+CGG | - | chr4_4:53955701-53955720 | Msa0688270:intron | 45.0% | |
| TGACATAATGTGCCGTCAGT+AGG | + | chr4_4:53955716-53955735 | None:intergenic | 45.0% | |
| TTGAGAATGGCAGCAAGACA+AGG | - | chr4_4:53955966-53955985 | Msa0688270:intron | 45.0% | |
| TGTATTTAACCACGCTAGGG+AGG | + | chr4_4:53956064-53956083 | None:intergenic | 45.0% | |
| !!! | TTTTTTCTTATATTTTATTA+CGG | + | chr4_4:53952097-53952116 | None:intergenic | 5.0% |
| ! | GGTGTTTTGCTCGTTGAGCT+AGG | - | chr4_4:53950409-53950428 | Msa0688270:CDS | 50.0% |
| AAGGAGTGGCCCAAGTGATA+TGG | + | chr4_4:53951630-53951649 | None:intergenic | 50.0% | |
| CACTTGGGCCACTCCTTAAA+TGG | - | chr4_4:53951633-53951652 | Msa0688270:intron | 50.0% | |
| TTACACCTTCGGACCAACCA+GGG | + | chr4_4:53952449-53952468 | None:intergenic | 50.0% | |
| ! | TGGTCCGAAGGTGTAAGGTA+TGG | - | chr4_4:53952453-53952472 | Msa0688270:intron | 50.0% |
| TACCAACCTCCAACTTGTGG+GGG | - | chr4_4:53953765-53953784 | Msa0688270:intron | 50.0% | |
| ! | TAATAGCCCCCACAAGTTGG+AGG | + | chr4_4:53953774-53953793 | None:intergenic | 50.0% |
| GTGTAATAGCCCCCACAAGT+TGG | + | chr4_4:53953777-53953796 | None:intergenic | 50.0% | |
| GAATTCACCACCATGTCAGC+TGG | + | chr4_4:53954377-53954396 | None:intergenic | 50.0% | |
| TGGGGTTCGAGTCAAGAGAA+AGG | + | chr4_4:53955201-53955220 | None:intergenic | 50.0% | |
| CATAATGTGCCGTCAGTAGG+TGG | + | chr4_4:53955713-53955732 | None:intergenic | 50.0% | |
| AGAATGGCAGCAAGACAAGG+TGG | - | chr4_4:53955969-53955988 | Msa0688270:intron | 50.0% | |
| GAATGGCAGCAAGACAAGGT+GGG | - | chr4_4:53955970-53955989 | Msa0688270:intron | 50.0% | |
| AATGGCAGCAAGACAAGGTG+GGG | - | chr4_4:53955971-53955990 | Msa0688270:intron | 50.0% | |
| !! | AGGTGTTGGGATTCGAACCC+TGG | - | chr4_4:53950361-53950380 | Msa0688270:CDS | 55.0% |
| GCTCGTTGAGCTAGGACTTG+TGG | - | chr4_4:53950417-53950436 | Msa0688270:CDS | 55.0% | |
| CTTACACCTTCGGACCAACC+AGG | + | chr4_4:53952450-53952469 | None:intergenic | 55.0% | |
| ! | CTGGTTGGTCCGAAGGTGTA+AGG | - | chr4_4:53952448-53952467 | Msa0688270:intron | 55.0% |
| GGGGGGATAGATAGCACACT+TGG | + | chr4_4:53955263-53955282 | None:intergenic | 55.0% | |
| ! | GCCGTCAGTAGGTGGTCTTA+TGG | + | chr4_4:53955705-53955724 | None:intergenic | 55.0% |
| GAACATTCACCTCCCTAGCG+TGG | - | chr4_4:53956052-53956071 | Msa0688270:intron | 55.0% | |
| CCTTCGGACCAACCAGGGAA+AGG | + | chr4_4:53952444-53952463 | None:intergenic | 60.0% | |
| ! | CCTTTCCCTGGTTGGTCCGA+AGG | - | chr4_4:53952441-53952460 | Msa0688270:intron | 60.0% |
| !! | GTCAGAGAGAGGGTGCTAGC+AGG | - | chr4_4:53953627-53953646 | Msa0688270:intron | 60.0% |
| ! | AGCCCCCACAAGTTGGAGGT+TGG | + | chr4_4:53953770-53953789 | None:intergenic | 60.0% |
| GGTGGTCGGGGTTTGAACCC+CGG | + | chr4_4:53954071-53954090 | None:intergenic | 65.0% | |
| GGCAGCAAGACAAGGTGGGG+TGG | - | chr4_4:53955974-53955993 | Msa0688270:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_4 | gene | 53950013 | 53956423 | 53950013 | ID=Msa0688270;Name=Msa0688270 |
| chr4_4 | mRNA | 53950013 | 53956423 | 53950013 | ID=Msa0688270-mRNA-1;Parent=Msa0688270;Name=Msa0688270-mRNA-1;_AED=0.19;_eAED=0.19;_QI=0|0.62|0.55|0.88|0.75|0.66|9|309|342 |
| chr4_4 | exon | 53950013 | 53950294 | 53950013 | ID=Msa0688270-mRNA-1:exon:14208;Parent=Msa0688270-mRNA-1 |
| chr4_4 | exon | 53950315 | 53950495 | 53950315 | ID=Msa0688270-mRNA-1:exon:14207;Parent=Msa0688270-mRNA-1 |
| chr4_4 | exon | 53951366 | 53951493 | 53951366 | ID=Msa0688270-mRNA-1:exon:14206;Parent=Msa0688270-mRNA-1 |
| chr4_4 | exon | 53951865 | 53952065 | 53951865 | ID=Msa0688270-mRNA-1:exon:14205;Parent=Msa0688270-mRNA-1 |
| chr4_4 | exon | 53952164 | 53952245 | 53952164 | ID=Msa0688270-mRNA-1:exon:14204;Parent=Msa0688270-mRNA-1 |
| chr4_4 | exon | 53953967 | 53954128 | 53953967 | ID=Msa0688270-mRNA-1:exon:14203;Parent=Msa0688270-mRNA-1 |
| chr4_4 | exon | 53954658 | 53954850 | 53954658 | ID=Msa0688270-mRNA-1:exon:14202;Parent=Msa0688270-mRNA-1 |
| chr4_4 | exon | 53954959 | 53955059 | 53954959 | ID=Msa0688270-mRNA-1:exon:14201;Parent=Msa0688270-mRNA-1 |
| chr4_4 | exon | 53956416 | 53956423 | 53956416 | ID=Msa0688270-mRNA-1:exon:14200;Parent=Msa0688270-mRNA-1 |
| chr4_4 | CDS | 53956416 | 53956423 | 53956416 | ID=Msa0688270-mRNA-1:cds;Parent=Msa0688270-mRNA-1 |
| chr4_4 | CDS | 53954959 | 53955059 | 53954959 | ID=Msa0688270-mRNA-1:cds;Parent=Msa0688270-mRNA-1 |
| chr4_4 | CDS | 53954658 | 53954850 | 53954658 | ID=Msa0688270-mRNA-1:cds;Parent=Msa0688270-mRNA-1 |
| chr4_4 | CDS | 53953967 | 53954128 | 53953967 | ID=Msa0688270-mRNA-1:cds;Parent=Msa0688270-mRNA-1 |
| chr4_4 | CDS | 53952164 | 53952245 | 53952164 | ID=Msa0688270-mRNA-1:cds;Parent=Msa0688270-mRNA-1 |
| chr4_4 | CDS | 53951865 | 53952065 | 53951865 | ID=Msa0688270-mRNA-1:cds;Parent=Msa0688270-mRNA-1 |
| chr4_4 | CDS | 53951366 | 53951493 | 53951366 | ID=Msa0688270-mRNA-1:cds;Parent=Msa0688270-mRNA-1 |
| chr4_4 | CDS | 53950342 | 53950495 | 53950342 | ID=Msa0688270-mRNA-1:cds;Parent=Msa0688270-mRNA-1 |
| chr4_4 | three_prime_UTR | 53950315 | 53950341 | 53950315 | ID=Msa0688270-mRNA-1:three_prime_utr;Parent=Msa0688270-mRNA-1 |
| chr4_4 | three_prime_UTR | 53950013 | 53950294 | 53950013 | ID=Msa0688270-mRNA-1:three_prime_utr;Parent=Msa0688270-mRNA-1 |
| Gene Sequence |
| Protein sequence |
