Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1253000 | XP_024628019.1 | 81.944 | 504 | 22 | 4 | 1 | 435 | 1 | 504 | 0.0 | 757 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1253000 | sp|A9XMT3|CCLOP_LOTJA | 52.591 | 521 | 158 | 12 | 1 | 435 | 1 | 518 | 5.37e-164 | 474 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1253000 | A0A3G2SGQ0 | 83.771 | 419 | 21 | 3 | 57 | 428 | 1 | 419 | 0.0 | 641 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0006110 | Msa1253000 | 0.804062 | 2.586514e-49 | -8.615850e-47 |
| Msa0014710 | Msa1253000 | 0.805828 | 1.105734e-49 | -8.615850e-47 |
| Msa0016570 | Msa1253000 | 0.802754 | 4.829230e-49 | -8.615850e-47 |
| Msa0017510 | Msa1253000 | 0.826909 | 2.094336e-54 | -8.615850e-47 |
| Msa0021510 | Msa1253000 | 0.806180 | 9.322627e-50 | -8.615850e-47 |
| Msa0034110 | Msa1253000 | 0.808606 | 2.851346e-50 | -8.615850e-47 |
| Msa0044260 | Msa1253000 | 0.803941 | 2.741149e-49 | -8.615850e-47 |
| Msa0064970 | Msa1253000 | 0.810036 | 1.407145e-50 | -8.615850e-47 |
| Msa0068680 | Msa1253000 | 0.808740 | 2.669933e-50 | -8.615850e-47 |
| Msa0071500 | Msa1253000 | 0.822429 | 2.380482e-53 | -8.615850e-47 |
| Msa0105070 | Msa1253000 | 0.806491 | 8.015664e-50 | -8.615850e-47 |
| Msa0114060 | Msa1253000 | 0.817458 | 3.263148e-52 | -8.615850e-47 |
| Msa0116770 | Msa1253000 | 0.808227 | 3.435880e-50 | -8.615850e-47 |
| Msa0629450 | Msa1253000 | 0.800276 | 1.555046e-48 | -8.615850e-47 |
| Msa0639610 | Msa1253000 | 0.809759 | 1.614616e-50 | -8.615850e-47 |
| Msa0650630 | Msa1253000 | 0.811618 | 6.396396e-51 | -8.615850e-47 |
| Msa0657970 | Msa1253000 | 0.823951 | 1.050205e-53 | -8.615850e-47 |
| Msa0661650 | Msa1253000 | 0.805458 | 1.322321e-49 | -8.615850e-47 |
| Msa0668260 | Msa1253000 | 0.811852 | 5.689789e-51 | -8.615850e-47 |
| Msa0672690 | Msa1253000 | 0.808733 | 2.678952e-50 | -8.615850e-47 |
| Msa0673450 | Msa1253000 | 0.837861 | 4.048200e-57 | -8.615850e-47 |
| Msa0673460 | Msa1253000 | 0.803835 | 2.883192e-49 | -8.615850e-47 |
| Msa0678930 | Msa1253000 | 0.836154 | 1.104701e-56 | -8.615850e-47 |
| Msa0681250 | Msa1253000 | 0.825925 | 3.593939e-54 | -8.615850e-47 |
| Msa0681270 | Msa1253000 | 0.834804 | 2.425012e-56 | -8.615850e-47 |
| Msa0688270 | Msa1253000 | 0.803815 | 2.911054e-49 | -8.615850e-47 |
| Msa0694370 | Msa1253000 | 0.815670 | 8.208798e-52 | -8.615850e-47 |
| Msa0697060 | Msa1253000 | 0.809017 | 2.329126e-50 | -8.615850e-47 |
| Msa0726140 | Msa1253000 | 0.812122 | 4.968478e-51 | -8.615850e-47 |
| Msa0731940 | Msa1253000 | 0.838264 | 3.187863e-57 | -8.615850e-47 |
| Msa0736200 | Msa1253000 | 0.802441 | 5.602199e-49 | -8.615850e-47 |
| Msa0756460 | Msa1253000 | 0.806101 | 9.686748e-50 | -8.615850e-47 |
| Msa0759410 | Msa1253000 | 0.810965 | 8.867742e-51 | -8.615850e-47 |
| Msa0760130 | Msa1253000 | 0.824316 | 8.623445e-54 | -8.615850e-47 |
| Msa0766630 | Msa1253000 | 0.849622 | 2.874049e-60 | -8.615850e-47 |
| Msa0767720 | Msa1253000 | 0.803340 | 3.652861e-49 | -8.615850e-47 |
| Msa0768310 | Msa1253000 | 0.820268 | 7.503379e-53 | -8.615850e-47 |
| Msa0769920 | Msa1253000 | 0.808189 | 3.500279e-50 | -8.615850e-47 |
| Msa0777790 | Msa1253000 | 0.803328 | 3.674334e-49 | -8.615850e-47 |
| Msa0777850 | Msa1253000 | 0.802575 | 5.257686e-49 | -8.615850e-47 |
| Msa0786500 | Msa1253000 | 0.815063 | 1.120214e-51 | -8.615850e-47 |
| Msa0789250 | Msa1253000 | 0.817826 | 2.696299e-52 | -8.615850e-47 |
| Msa0802830 | Msa1253000 | 0.822710 | 2.048318e-53 | -8.615850e-47 |
| Msa0810220 | Msa1253000 | 0.824943 | 6.137310e-54 | -8.615850e-47 |
| Msa0811080 | Msa1253000 | 0.836172 | 1.093419e-56 | -8.615850e-47 |
| Msa0820850 | Msa1253000 | 0.821723 | 3.468989e-53 | -8.615850e-47 |
| Msa0822870 | Msa1253000 | 0.838756 | 2.379953e-57 | -8.615850e-47 |
| Msa0832340 | Msa1253000 | 0.825322 | 4.993178e-54 | -8.615850e-47 |
| Msa0139060 | Msa1253000 | 0.806132 | 9.541575e-50 | -8.615850e-47 |
| Msa0142220 | Msa1253000 | 0.857289 | 1.806329e-62 | -8.615850e-47 |
| Msa0145260 | Msa1253000 | 0.807174 | 5.750754e-50 | -8.615850e-47 |
| Msa0153910 | Msa1253000 | 0.829447 | 5.120938e-55 | -8.615850e-47 |
| Msa0157290 | Msa1253000 | 0.826228 | 3.043430e-54 | -8.615850e-47 |
| Msa0158480 | Msa1253000 | 0.814639 | 1.390781e-51 | -8.615850e-47 |
| Msa0165210 | Msa1253000 | 0.817279 | 3.580138e-52 | -8.615850e-47 |
| Msa0188460 | Msa1253000 | 0.805535 | 1.273652e-49 | -8.615850e-47 |
| Msa0198340 | Msa1253000 | 0.814190 | 1.747920e-51 | -8.615850e-47 |
| Msa0198910 | Msa1253000 | 0.803612 | 3.207657e-49 | -8.615850e-47 |
| Msa0211150 | Msa1253000 | 0.811207 | 7.857555e-51 | -8.615850e-47 |
| Msa0214300 | Msa1253000 | 0.842327 | 2.767619e-58 | -8.615850e-47 |
| Msa0214370 | Msa1253000 | 0.821962 | 3.054264e-53 | -8.615850e-47 |
| Msa0214380 | Msa1253000 | 0.823794 | 1.143172e-53 | -8.615850e-47 |
| Msa0218240 | Msa1253000 | 0.830689 | 2.549651e-55 | -8.615850e-47 |
| Msa0220740 | Msa1253000 | 0.805717 | 1.166791e-49 | -8.615850e-47 |
| Msa0227480 | Msa1253000 | 0.835580 | 1.544450e-56 | -8.615850e-47 |
| Msa0233080 | Msa1253000 | 0.823137 | 1.628835e-53 | -8.615850e-47 |
| Msa0233300 | Msa1253000 | 0.824751 | 6.810653e-54 | -8.615850e-47 |
| Msa1226660 | Msa1253000 | 0.805345 | 1.396270e-49 | -8.615850e-47 |
| Msa1236430 | Msa1253000 | 0.802369 | 5.796976e-49 | -8.615850e-47 |
| Msa1249490 | Msa1253000 | 0.810858 | 9.354316e-51 | -8.615850e-47 |
| Msa1253000 | Msa1253020 | 0.820068 | 8.337121e-53 | -8.615850e-47 |
| Msa1253000 | Msa1277660 | 0.841645 | 4.189989e-58 | -8.615850e-47 |
| Msa1253000 | Msa1278110 | 0.808679 | 2.750724e-50 | -8.615850e-47 |
| Msa1253000 | Msa1278400 | 0.803486 | 3.406750e-49 | -8.615850e-47 |
| Msa1253000 | Msa1279370 | 0.817163 | 3.802435e-52 | -8.615850e-47 |
| Msa1253000 | Msa1283330 | 0.806203 | 9.217241e-50 | -8.615850e-47 |
| Msa1253000 | Msa1283860 | 0.818283 | 2.125178e-52 | -8.615850e-47 |
| Msa1253000 | Msa1284680 | 0.853524 | 2.257679e-61 | -8.615850e-47 |
| Msa1253000 | Msa1285930 | 0.809253 | 2.073248e-50 | -8.615850e-47 |
| Msa1253000 | Msa1288560 | 0.816325 | 5.860072e-52 | -8.615850e-47 |
| Msa1253000 | Msa1292570 | 0.800733 | 1.254739e-48 | -8.615850e-47 |
| Msa1253000 | Msa1297290 | 0.802631 | 5.117760e-49 | -8.615850e-47 |
| Msa1253000 | Msa1307890 | 0.812392 | 4.338746e-51 | -8.615850e-47 |
| Msa1253000 | Msa1309030 | 0.800418 | 1.455009e-48 | -8.615850e-47 |
| Msa1253000 | Msa1322890 | 0.800716 | 1.264949e-48 | -8.615850e-47 |
| Msa1253000 | Msa1324500 | 0.802657 | 5.057216e-49 | -8.615850e-47 |
| Msa1253000 | Msa1331000 | 0.804863 | 1.761416e-49 | -8.615850e-47 |
| Msa1253000 | Msa1342840 | 0.801283 | 9.687689e-49 | -8.615850e-47 |
| Msa1253000 | Msa1353470 | 0.810976 | 8.817555e-51 | -8.615850e-47 |
| Msa1253000 | Msa1372760 | 0.810863 | 9.326944e-51 | -8.615850e-47 |
| Msa1253000 | Msa1373030 | 0.831177 | 1.935183e-55 | -8.615850e-47 |
| Msa1253000 | Msa1374470 | 0.812913 | 3.337254e-51 | -8.615850e-47 |
| Msa1253000 | Msa1385000 | 0.802786 | 4.756211e-49 | -8.615850e-47 |
| Msa1253000 | Msa1397860 | 0.837366 | 5.424526e-57 | -8.615850e-47 |
| Msa1253000 | Msa1403480 | 0.803434 | 3.492787e-49 | -8.615850e-47 |
| Msa1253000 | Msa1410680 | 0.823362 | 1.442620e-53 | -8.615850e-47 |
| Msa1253000 | Msa1411020 | 0.827206 | 1.778177e-54 | -8.615850e-47 |
| Msa1253000 | Msa1415910 | 0.800523 | 1.384882e-48 | -8.615850e-47 |
| Msa1253000 | Msa1420490 | 0.808647 | 2.795209e-50 | -8.615850e-47 |
| Msa1253000 | Msa1420820 | 0.802980 | 4.337024e-49 | -8.615850e-47 |
| Msa1253000 | Msa1423390 | 0.809078 | 2.260583e-50 | -8.615850e-47 |
| Msa1253000 | Msa1424290 | 0.820265 | 7.514953e-53 | -8.615850e-47 |
| Msa1253000 | Msa1433120 | 0.834140 | 3.561161e-56 | -8.615850e-47 |
| Msa1253000 | Msa1434350 | 0.818397 | 2.002480e-52 | -8.615850e-47 |
| Msa1253000 | Msa1438250 | 0.822297 | 2.554582e-53 | -8.615850e-47 |
| Msa1253000 | Msa1439320 | 0.817813 | 2.713920e-52 | -8.615850e-47 |
| Msa1253000 | Msa1440370 | 0.810529 | 1.101660e-50 | -8.615850e-47 |
| Msa1253000 | Msa1440560 | 0.802795 | 4.735391e-49 | -8.615850e-47 |
| Msa1253000 | Msa1440810 | 0.812917 | 3.330338e-51 | -8.615850e-47 |
| Msa1253000 | Msa1451570 | 0.819007 | 1.455807e-52 | -8.615850e-47 |
| Msa1253000 | Msa1452240 | 0.815310 | 9.869590e-52 | -8.615850e-47 |
| Msa1253000 | Msa1460050 | 0.811485 | 6.838546e-51 | -8.615850e-47 |
| Msa1253000 | Msa1466540 | 0.837418 | 5.260942e-57 | -8.615850e-47 |
| Msa0371730 | Msa1253000 | 0.814239 | 1.704959e-51 | -8.615850e-47 |
| Msa0381610 | Msa1253000 | -0.803441 | 3.480246e-49 | -8.615850e-47 |
| Msa0384890 | Msa1253000 | 0.824474 | 7.913509e-54 | -8.615850e-47 |
| Msa0386090 | Msa1253000 | 0.805559 | 1.259281e-49 | -8.615850e-47 |
| Msa0390400 | Msa1253000 | -0.805272 | 1.445891e-49 | -8.615850e-47 |
| Msa0395790 | Msa1253000 | 0.819030 | 1.438458e-52 | -8.615850e-47 |
| Msa0397750 | Msa1253000 | 0.815862 | 7.436162e-52 | -8.615850e-47 |
| Msa0399300 | Msa1253000 | 0.822249 | 2.621041e-53 | -8.615850e-47 |
| Msa0402290 | Msa1253000 | 0.840697 | 7.438750e-58 | -8.615850e-47 |
| Msa0407750 | Msa1253000 | 0.840496 | 8.397376e-58 | -8.615850e-47 |
| Msa0407960 | Msa1253000 | 0.832950 | 7.054053e-56 | -8.615850e-47 |
| Msa0411390 | Msa1253000 | 0.802125 | 6.508456e-49 | -8.615850e-47 |
| Msa0419980 | Msa1253000 | 0.807788 | 4.259378e-50 | -8.615850e-47 |
| Msa0427710 | Msa1253000 | 0.804653 | 1.947837e-49 | -8.615850e-47 |
| Msa0430420 | Msa1253000 | 0.807928 | 3.976905e-50 | -8.615850e-47 |
| Msa0432300 | Msa1253000 | 0.821967 | 3.046680e-53 | -8.615850e-47 |
| Msa0435230 | Msa1253000 | 0.817658 | 2.941426e-52 | -8.615850e-47 |
| Msa0436780 | Msa1253000 | 0.818452 | 1.945887e-52 | -8.615850e-47 |
| Msa0436800 | Msa1253000 | 0.847177 | 1.363416e-59 | -8.615850e-47 |
| Msa0437990 | Msa1253000 | 0.818086 | 2.355399e-52 | -8.615850e-47 |
| Msa0440750 | Msa1253000 | 0.808701 | 2.721352e-50 | -8.615850e-47 |
| Msa0453120 | Msa1253000 | 0.805283 | 1.438868e-49 | -8.615850e-47 |
| Msa0455760 | Msa1253000 | 0.800299 | 1.538342e-48 | -8.615850e-47 |
| Msa0464680 | Msa1253000 | 0.810127 | 1.344891e-50 | -8.615850e-47 |
| Msa0479340 | Msa1253000 | 0.815888 | 7.339881e-52 | -8.615850e-47 |
| Msa0981370 | Msa1253000 | 0.843957 | 1.017778e-58 | -8.615850e-47 |
| Msa0991830 | Msa1253000 | 0.807286 | 5.444641e-50 | -8.615850e-47 |
| Msa1000890 | Msa1253000 | 0.802930 | 4.439623e-49 | -8.615850e-47 |
| Msa1000900 | Msa1253000 | 0.812513 | 4.082519e-51 | -8.615850e-47 |
| Msa1003620 | Msa1253000 | 0.807984 | 3.869737e-50 | -8.615850e-47 |
| Msa1004840 | Msa1253000 | 0.819627 | 1.051594e-52 | -8.615850e-47 |
| Msa1014540 | Msa1253000 | 0.853284 | 2.646282e-61 | -8.615850e-47 |
| Msa1016280 | Msa1253000 | 0.811933 | 5.462339e-51 | -8.615850e-47 |
| Msa1016320 | Msa1253000 | 0.817229 | 3.674404e-52 | -8.615850e-47 |
| Msa1023950 | Msa1253000 | 0.844411 | 7.687135e-59 | -8.615850e-47 |
| Msa1024240 | Msa1253000 | 0.811615 | 6.407982e-51 | -8.615850e-47 |
| Msa1030970 | Msa1253000 | 0.803143 | 4.012803e-49 | -8.615850e-47 |
| Msa1044840 | Msa1253000 | 0.802037 | 6.784197e-49 | -8.615850e-47 |
| Msa1046460 | Msa1253000 | 0.800663 | 1.296528e-48 | -8.615850e-47 |
| Msa1063860 | Msa1253000 | 0.817604 | 3.024858e-52 | -8.615850e-47 |
| Msa1075220 | Msa1253000 | -0.810390 | 1.180550e-50 | -8.615850e-47 |
| Msa1075540 | Msa1253000 | 0.814473 | 1.513454e-51 | -8.615850e-47 |
| Msa1075650 | Msa1253000 | 0.829563 | 4.799284e-55 | -8.615850e-47 |
| Msa1079180 | Msa1253000 | 0.808644 | 2.798295e-50 | -8.615850e-47 |
| Msa1082500 | Msa1253000 | 0.817460 | 3.260910e-52 | -8.615850e-47 |
| Msa1083840 | Msa1253000 | 0.817908 | 2.583713e-52 | -8.615850e-47 |
| Msa0239090 | Msa1253000 | 0.805075 | 1.590114e-49 | -8.615850e-47 |
| Msa0251320 | Msa1253000 | 0.823792 | 1.144581e-53 | -8.615850e-47 |
| Msa0251640 | Msa1253000 | 0.800948 | 1.134098e-48 | -8.615850e-47 |
| Msa0257460 | Msa1253000 | 0.803724 | 3.041007e-49 | -8.615850e-47 |
| Msa0265670 | Msa1253000 | 0.802033 | 6.796594e-49 | -8.615850e-47 |
| Msa0270520 | Msa1253000 | 0.806376 | 8.476894e-50 | -8.615850e-47 |
| Msa0273100 | Msa1253000 | 0.800745 | 1.247816e-48 | -8.615850e-47 |
| Msa0285450 | Msa1253000 | 0.805065 | 1.598077e-49 | -8.615850e-47 |
| Msa0290870 | Msa1253000 | 0.802970 | 4.356879e-49 | -8.615850e-47 |
| Msa0294030 | Msa1253000 | 0.816654 | 4.947456e-52 | -8.615850e-47 |
| Msa0307540 | Msa1253000 | 0.809263 | 2.062900e-50 | -8.615850e-47 |
| Msa0326200 | Msa1253000 | 0.811221 | 7.801888e-51 | -8.615850e-47 |
| Msa0331000 | Msa1253000 | 0.824680 | 7.078896e-54 | -8.615850e-47 |
| Msa0337900 | Msa1253000 | 0.845113 | 4.972468e-59 | -8.615850e-47 |
| Msa0340450 | Msa1253000 | 0.808068 | 3.713877e-50 | -8.615850e-47 |
| Msa0345970 | Msa1253000 | 0.816332 | 5.839283e-52 | -8.615850e-47 |
| Msa0355220 | Msa1253000 | 0.837303 | 5.628563e-57 | -8.615850e-47 |
| Msa0357340 | Msa1253000 | 0.829538 | 4.866958e-55 | -8.615850e-47 |
| Msa0360510 | Msa1253000 | 0.810918 | 9.078323e-51 | -8.615850e-47 |
| Msa0363790 | Msa1253000 | 0.803661 | 3.133247e-49 | -8.615850e-47 |
| Msa1113170 | Msa1253000 | 0.820166 | 7.916019e-53 | -8.615850e-47 |
| Msa1114030 | Msa1253000 | 0.826903 | 2.100928e-54 | -8.615850e-47 |
| Msa1117150 | Msa1253000 | 0.803130 | 4.037799e-49 | -8.615850e-47 |
| Msa1121200 | Msa1253000 | 0.808044 | 3.758532e-50 | -8.615850e-47 |
| Msa1121490 | Msa1253000 | 0.819552 | 1.093958e-52 | -8.615850e-47 |
| Msa1136090 | Msa1253000 | 0.811536 | 6.666648e-51 | -8.615850e-47 |
| Msa1137570 | Msa1253000 | 0.810721 | 1.001218e-50 | -8.615850e-47 |
| Msa1147740 | Msa1253000 | 0.808405 | 3.148123e-50 | -8.615850e-47 |
| Msa1160670 | Msa1253000 | 0.812095 | 5.037250e-51 | -8.615850e-47 |
| Msa1162550 | Msa1253000 | -0.813543 | 2.426556e-51 | -8.615850e-47 |
| Msa1174040 | Msa1253000 | 0.804375 | 2.226720e-49 | -8.615850e-47 |
| Msa1187940 | Msa1253000 | 0.808317 | 3.287089e-50 | -8.615850e-47 |
| Msa1187950 | Msa1253000 | 0.824038 | 1.002287e-53 | -8.615850e-47 |
| Msa1200030 | Msa1253000 | 0.802105 | 6.568565e-49 | -8.615850e-47 |
| Msa0512900 | Msa1253000 | 0.809876 | 1.523110e-50 | -8.615850e-47 |
| Msa0513490 | Msa1253000 | 0.803266 | 3.783236e-49 | -8.615850e-47 |
| Msa0523940 | Msa1253000 | 0.808672 | 2.760676e-50 | -8.615850e-47 |
| Msa0531180 | Msa1253000 | 0.803906 | 2.787376e-49 | -8.615850e-47 |
| Msa0532350 | Msa1253000 | 0.803192 | 3.920200e-49 | -8.615850e-47 |
| Msa0544240 | Msa1253000 | 0.810700 | 1.011596e-50 | -8.615850e-47 |
| Msa0545200 | Msa1253000 | 0.809249 | 2.077352e-50 | -8.615850e-47 |
| Msa0585230 | Msa1253000 | 0.801464 | 8.894943e-49 | -8.615850e-47 |
| Msa0589780 | Msa1253000 | 0.811202 | 7.878468e-51 | -8.615850e-47 |
| Msa0598780 | Msa1253000 | 0.800789 | 1.222045e-48 | -8.615850e-47 |
| Msa0600700 | Msa1253000 | 0.833944 | 3.985723e-56 | -8.615850e-47 |
| Msa0844490 | Msa1253000 | 0.824034 | 1.004269e-53 | -8.615850e-47 |
| Msa0846350 | Msa1253000 | 0.810143 | 1.334610e-50 | -8.615850e-47 |
| Msa0855760 | Msa1253000 | 0.838003 | 3.721643e-57 | -8.615850e-47 |
| Msa0857680 | Msa1253000 | 0.801240 | 9.885125e-49 | -8.615850e-47 |
| Msa0861130 | Msa1253000 | 0.817585 | 3.055926e-52 | -8.615850e-47 |
| Msa0880140 | Msa1253000 | 0.823290 | 1.500069e-53 | -8.615850e-47 |
| Msa0885280 | Msa1253000 | 0.814161 | 1.774212e-51 | -8.615850e-47 |
| Msa0885290 | Msa1253000 | 0.824095 | 9.717383e-54 | -8.615850e-47 |
| Msa0897330 | Msa1253000 | 0.818029 | 2.425740e-52 | -8.615850e-47 |
| Msa0897880 | Msa1253000 | 0.804475 | 2.122520e-49 | -8.615850e-47 |
| Msa0901400 | Msa1253000 | 0.833400 | 5.451920e-56 | -8.615850e-47 |
| Msa0907070 | Msa1253000 | 0.801676 | 8.048556e-49 | -8.615850e-47 |
| Msa0907260 | Msa1253000 | 0.819130 | 1.365148e-52 | -8.615850e-47 |
| Msa0909120 | Msa1253000 | 0.806622 | 7.523009e-50 | -8.615850e-47 |
| Msa0914760 | Msa1253000 | 0.803907 | 2.785779e-49 | -8.615850e-47 |
| Msa0922720 | Msa1253000 | 0.802661 | 5.045410e-49 | -8.615850e-47 |
| Msa0926890 | Msa1253000 | 0.800038 | 1.738020e-48 | -8.615850e-47 |
| Msa0927380 | Msa1253000 | 0.814447 | 1.533564e-51 | -8.615850e-47 |
| Msa0931520 | Msa1253000 | 0.809076 | 2.262876e-50 | -8.615850e-47 |
| Msa0933100 | Msa1253000 | 0.812211 | 4.752000e-51 | -8.615850e-47 |
| Msa0935910 | Msa1253000 | 0.843356 | 1.473196e-58 | -8.615850e-47 |
| Msa0952720 | Msa1253000 | 0.803064 | 4.166986e-49 | -8.615850e-47 |
| Msa0953120 | Msa1253000 | 0.806218 | 9.153371e-50 | -8.615850e-47 |
| Msa0954910 | Msa1253000 | 0.809920 | 1.490712e-50 | -8.615850e-47 |
| Msa0956270 | Msa1253000 | 0.818460 | 1.937457e-52 | -8.615850e-47 |
| Msa0959770 | Msa1253000 | 0.816011 | 6.888112e-52 | -8.615850e-47 |
| Msa0965610 | Msa1253000 | 0.810356 | 1.200650e-50 | -8.615850e-47 |
| Msa0969450 | Msa1253000 | 0.809292 | 2.034151e-50 | -8.615850e-47 |
| Msa0969520 | Msa1253000 | 0.808711 | 2.708502e-50 | -8.615850e-47 |
| Msa0974070 | Msa1253000 | 0.806178 | 9.329809e-50 | -8.615850e-47 |
| Msa0974080 | Msa1253000 | 0.821279 | 4.392858e-53 | -8.615850e-47 |
| Msa0975220 | Msa1253000 | 0.808363 | 3.213129e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1253000 | MtrunA17_Chr8g0369511 | 72.436 | 468 | 61 | 7 | 1 | 435 | 1 | 433 | 0.0 | 581 |
| Msa1253000 | MtrunA17_Chr5g0409341 | 52.023 | 519 | 159 | 13 | 1 | 435 | 1 | 513 | 5.47e-154 | 446 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 78 sgRNAs with CRISPR-Local
Find 181 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCACGCCTTGTTTCGCTATT+TGG | 0.110001 | 8_2:-50167922 | None:intergenic |
| ATCCAAGTCAATTAGGTTTA+TGG | 0.146050 | 8_2:-50168107 | None:intergenic |
| GATTTCAATCAATTTCCTTT+AGG | 0.212802 | 8_2:+50167128 | Msa1253000:CDS |
| CAAGAAGTTTCAAATTTAAA+TGG | 0.233249 | 8_2:+50167746 | Msa1253000:CDS |
| ATTTCAATCAATTTCCTTTA+GGG | 0.236035 | 8_2:+50167129 | Msa1253000:CDS |
| TTCAAGATAGCTTGCATATC+AGG | 0.258847 | 8_2:-50169045 | None:intergenic |
| TGATGAAAAGGAACGCCTTC+TGG | 0.271498 | 8_2:+50169191 | Msa1253000:CDS |
| CTAAACCATCCAAGTCAATT+AGG | 0.282523 | 8_2:-50168114 | None:intergenic |
| TATTTCCTCCAAACTAGTTT+TGG | 0.309614 | 8_2:+50167983 | Msa1253000:CDS |
| TCCCTTCACCAAAACTAGTT+TGG | 0.310267 | 8_2:-50167991 | None:intergenic |
| TCTGTAACATCAGCTATTTC+AGG | 0.315882 | 8_2:+50168586 | Msa1253000:CDS |
| GAGTCTCCTTCGACATATAT+TGG | 0.334178 | 8_2:-50168037 | None:intergenic |
| TTGGTGAAGGGAATGAAAAT+TGG | 0.344837 | 8_2:+50168002 | Msa1253000:CDS |
| AGTTGGAGGAAGTACAAGTT+TGG | 0.349381 | 8_2:+50168279 | Msa1253000:CDS |
| TGAGGATTTGATTGATGAAA+AGG | 0.358635 | 8_2:+50169179 | Msa1253000:CDS |
| GAAGCTGAGCTCAAATATAT+TGG | 0.360581 | 8_2:-50168151 | None:intergenic |
| ATTGACGAAGACGAATTTGA+TGG | 0.378481 | 8_2:-50167806 | None:intergenic |
| GTTGGTATTGGTACTCCAAT+AGG | 0.380354 | 8_2:-50166129 | None:intergenic |
| TTAATTTGTCCTTCATGAAC+AGG | 0.381084 | 8_2:+50169109 | Msa1253000:CDS |
| ATGAGCTTTCACAAAGAGTC+TGG | 0.399662 | 8_2:-50168249 | None:intergenic |
| AGACTCTACTATTCAAGTTA+AGG | 0.423459 | 8_2:+50168054 | Msa1253000:CDS |
| TGAGAAACCGCCTTGAAACT+TGG | 0.429297 | 8_2:-50166162 | None:intergenic |
| CATGGACATGCCAAGTTTCA+AGG | 0.431597 | 8_2:+50166152 | Msa1253000:CDS |
| GCTGCAACATTAGTCTCTAC+TGG | 0.437402 | 8_2:+50168193 | Msa1253000:CDS |
| ACATTGATGGATAACCCTAT+TGG | 0.443403 | 8_2:+50166114 | Msa1253000:CDS |
| CTTCACCAAAACTAGTTTGG+AGG | 0.447143 | 8_2:-50167988 | None:intergenic |
| GTTGAATAATCATTCGCCTT+AGG | 0.448291 | 8_2:-50167104 | None:intergenic |
| GGCATGTCCATGGTTGGTAT+TGG | 0.451160 | 8_2:-50166141 | None:intergenic |
| GTCTTGCATAATTCTTCCCT+CGG | 0.451809 | 8_2:-50167078 | None:intergenic |
| TTGGTATTGGTACTCCAATA+GGG | 0.470136 | 8_2:-50166128 | None:intergenic |
| GAAAGCTCATGGAATAAAGT+TGG | 0.479707 | 8_2:+50168262 | Msa1253000:CDS |
| TTTAACAACCTTAATCAAAA+GGG | 0.492308 | 8_2:+50167770 | Msa1253000:CDS |
| AGACTCTTTGTGAAAGCTCA+TGG | 0.493197 | 8_2:+50168251 | Msa1253000:CDS |
| TCAAGATAGCTTGCATATCA+GGG | 0.507239 | 8_2:-50169044 | None:intergenic |
| TGAACAAACAAAGCAGATAG+AGG | 0.517837 | 8_2:+50169140 | Msa1253000:CDS |
| ATAAACCTAATTGACTTGGA+TGG | 0.525607 | 8_2:+50168109 | Msa1253000:CDS |
| TTAGTCTCTACTGGTTTCGA+TGG | 0.529588 | 8_2:+50168202 | Msa1253000:CDS |
| ATGATCGAACTTCCTTCTCA+AGG | 0.535739 | 8_2:-50169080 | None:intergenic |
| AGAATCCTTCCTGTTCATGA+AGG | 0.536170 | 8_2:-50169118 | None:intergenic |
| CCCTACGACAATTACCCTAA+AGG | 0.536531 | 8_2:-50167143 | None:intergenic |
| ATACATAGATTGAGATGGAA+GGG | 0.543146 | 8_2:+50166040 | None:intergenic |
| TAGATTGAGATGGAAGGGAG+AGG | 0.543702 | 8_2:+50166045 | None:intergenic |
| TGGAGGAAATAATCTTCTTG+AGG | 0.545125 | 8_2:-50167971 | None:intergenic |
| CTTGAAACTTGGCATGTCCA+TGG | 0.546639 | 8_2:-50166151 | None:intergenic |
| AATAGAATCTGTTCACATGT+TGG | 0.551048 | 8_2:+50167697 | Msa1253000:CDS |
| ATGCAGAATGGCTGAGGCAA+AGG | 0.552654 | 8_2:+50168996 | Msa1253000:intron |
| TTTGTAATGCAGAATGGCTG+AGG | 0.556244 | 8_2:+50168990 | Msa1253000:intron |
| GATACATAGATTGAGATGGA+AGG | 0.562645 | 8_2:+50166039 | None:intergenic |
| TTGTTTCAATCTCTTCCAGA+AGG | 0.563367 | 8_2:-50169206 | None:intergenic |
| AGCTCATGGAATAAAGTTGG+AGG | 0.576429 | 8_2:+50168265 | Msa1253000:CDS |
| AAATATGTCTGTAATATCCG+AGG | 0.579761 | 8_2:+50167061 | Msa1253000:CDS |
| ATCCATAAACCTAATTGACT+TGG | 0.585153 | 8_2:+50168105 | Msa1253000:CDS |
| AATTATGCAAGACGATCCTA+AGG | 0.585758 | 8_2:+50167088 | Msa1253000:CDS |
| GGACCTTCATAAGCAAAATG+AGG | 0.588458 | 8_2:+50169161 | Msa1253000:CDS |
| CAAAATCCAATATATGTCGA+AGG | 0.593741 | 8_2:+50168031 | Msa1253000:CDS |
| TTTGTCCTTCATGAACAGGA+AGG | 0.596032 | 8_2:+50169113 | Msa1253000:CDS |
| AATTAATTATGCAGAGGACA+AGG | 0.597887 | 8_2:+50168690 | Msa1253000:intron |
| CACATGTTGGCCACTCAGAA+TGG | 0.598667 | 8_2:+50167710 | Msa1253000:CDS |
| AGAGTCTGGCTTGATATGCA+TGG | 0.600443 | 8_2:-50168235 | None:intergenic |
| CTTGTGCTACTTGAGCATTG+TGG | 0.600889 | 8_2:-50167673 | None:intergenic |
| TAATCTGAAAGATGATAGAG+AGG | 0.600923 | 8_2:+50168420 | Msa1253000:CDS |
| CACAATGCTCAAGTAGCACA+AGG | 0.601713 | 8_2:+50167674 | Msa1253000:CDS |
| TGGAGTACCAATACCAACCA+TGG | 0.606350 | 8_2:+50166134 | Msa1253000:CDS |
| AAACTTGGCATGTCCATGGT+TGG | 0.610749 | 8_2:-50166147 | None:intergenic |
| GCGATGCGAAGACCTTGAGA+AGG | 0.628490 | 8_2:+50169068 | Msa1253000:CDS |
| GAATGGCTGAGGCAAAGGAA+AGG | 0.630169 | 8_2:+50169001 | Msa1253000:intron |
| ACTGGTTTCGATGGATGCGA+CGG | 0.631529 | 8_2:+50168211 | Msa1253000:CDS |
| AGCAGCCAAATAGCGAAACA+AGG | 0.638063 | 8_2:+50167917 | Msa1253000:CDS |
| AGTTTGGAAAATAGAGTCAG+AGG | 0.639120 | 8_2:+50168295 | Msa1253000:CDS |
| GCAGCAATAGAAGATTCACT+TGG | 0.640418 | 8_2:-50168175 | None:intergenic |
| CAAGATAGCTTGCATATCAG+GGG | 0.645450 | 8_2:-50169043 | None:intergenic |
| CCAAATAGCGAAACAAGGCG+TGG | 0.648642 | 8_2:+50167922 | Msa1253000:CDS |
| ATTGTTATCACCATTCTGAG+TGG | 0.655235 | 8_2:-50167720 | None:intergenic |
| AATATGTCTGTAATATCCGA+GGG | 0.656938 | 8_2:+50167062 | Msa1253000:CDS |
| CTTATACAAGAATTCAAGTG+AGG | 0.660852 | 8_2:+50166077 | Msa1253000:CDS |
| AAGATAGCTTGCATATCAGG+GGG | 0.672728 | 8_2:-50169042 | None:intergenic |
| GGACATGCCAAGTTTCAAGG+CGG | 0.718606 | 8_2:+50166155 | Msa1253000:CDS |
| AAGCTTTAGAACAGACAGTG+AGG | 0.721284 | 8_2:+50166185 | Msa1253000:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTGTATAAATCTTTTTTTTA+AGG | - | chr8_2:50168944-50168963 | None:intergenic | 10.0% |
| !! | ATAAAATGAAGTTAAATTGT+TGG | + | chr8_2:50166509-50166528 | Msa1253000:intron | 15.0% |
| !! | TAAAATGAAGTTAAATTGTT+GGG | + | chr8_2:50166510-50166529 | Msa1253000:intron | 15.0% |
| !!! | ATTGAAATTTTTGACTTTTT+TGG | + | chr8_2:50166619-50166638 | Msa1253000:intron | 15.0% |
| !! | AGCTTATATAAAACAATTTA+AGG | - | chr8_2:50166705-50166724 | None:intergenic | 15.0% |
| !! | AATCAAAAGAAATAGATTAA+TGG | - | chr8_2:50166991-50167010 | None:intergenic | 15.0% |
| !! | AAATCTTAACTATAAGAAAA+AGG | - | chr8_2:50168910-50168929 | None:intergenic | 15.0% |
| !! | AATATACATGTTAGAACAAA+GGG | - | chr8_2:50166249-50166268 | None:intergenic | 20.0% |
| !!! | TTTTATGATAACAGTTTGTT+TGG | + | chr8_2:50166310-50166329 | Msa1253000:intron | 20.0% |
| !!! | CAAAAAAAGTTACCTTTTAA+AGG | - | chr8_2:50166572-50166591 | None:intergenic | 20.0% |
| !! | AATTAATGTAATCAATGCAT+TGG | + | chr8_2:50166594-50166613 | Msa1253000:intron | 20.0% |
| !!! | TGATAGATACTAAATTTTAC+AGG | - | chr8_2:50166903-50166922 | None:intergenic | 20.0% |
| !! | ATTTCAATCAATTTCCTTTA+GGG | + | chr8_2:50167129-50167148 | Msa1253000:CDS | 20.0% |
| !!! | ATTTAAAATTACACTGTGAT+TGG | + | chr8_2:50167498-50167517 | Msa1253000:intron | 20.0% |
| !!! | TATAAAATGTTTTACACTGA+CGG | + | chr8_2:50167526-50167545 | Msa1253000:intron | 20.0% |
| !!! | GAAATTTTCAACAACTTATT+TGG | + | chr8_2:50167616-50167635 | Msa1253000:intron | 20.0% |
| !! | CAAGAAGTTTCAAATTTAAA+TGG | + | chr8_2:50167746-50167765 | Msa1253000:CDS | 20.0% |
| !!! | TTTTAACAACCTTAATCAAA+AGG | + | chr8_2:50167769-50167788 | Msa1253000:CDS | 20.0% |
| !! | TTTAACAACCTTAATCAAAA+GGG | + | chr8_2:50167770-50167789 | Msa1253000:CDS | 20.0% |
| !!! | AGACAAAAATTTTGTTTTTG+TGG | + | chr8_2:50168367-50168386 | Msa1253000:intron | 20.0% |
| !!! | AATTAGTTTCTCTGAAATTA+TGG | + | chr8_2:50168469-50168488 | Msa1253000:intron | 20.0% |
| !!! | ATCTATTTTGTAAAAGACAA+TGG | + | chr8_2:50168778-50168797 | Msa1253000:intron | 20.0% |
| !! | ACTTTTCTTGAAAACATTGA+TGG | + | chr8_2:50166101-50166120 | Msa1253000:CDS | 25.0% |
| ! | CAATATACATGTTAGAACAA+AGG | - | chr8_2:50166250-50166269 | None:intergenic | 25.0% |
| ! | CTTTGTTCTAACATGTATAT+TGG | + | chr8_2:50166248-50166267 | Msa1253000:intron | 25.0% |
| ! | GTTTCTTGTGAAATTTCTAA+AGG | + | chr8_2:50166339-50166358 | Msa1253000:intron | 25.0% |
| !!! | GAAATTTTTGACTTTTTTGG+TGG | + | chr8_2:50166622-50166641 | Msa1253000:intron | 25.0% |
| !!! | GGTGGAATAATTTTTTCTTT+TGG | + | chr8_2:50166640-50166659 | Msa1253000:intron | 25.0% |
| !!! | CTTATTTCTATAAACTCTCT+AGG | - | chr8_2:50166743-50166762 | None:intergenic | 25.0% |
| ! | AATAAGCTGAAAACAACTTA+TGG | + | chr8_2:50166757-50166776 | Msa1253000:intron | 25.0% |
| ! | AAACATTTGCAAGACTATTT+AGG | - | chr8_2:50166813-50166832 | None:intergenic | 25.0% |
| !! | TACAGACATATTTTGCATAT+TGG | - | chr8_2:50167054-50167073 | None:intergenic | 25.0% |
| ! | GATTTCAATCAATTTCCTTT+AGG | + | chr8_2:50167128-50167147 | Msa1253000:CDS | 25.0% |
| ! | CTAGTTCAATGCTTATAATT+TGG | + | chr8_2:50167220-50167239 | Msa1253000:intron | 25.0% |
| ! | ATAACGAAATCAAATCAACA+TGG | - | chr8_2:50167370-50167389 | None:intergenic | 25.0% |
| ! | AGGTATAATATGGTTTGATT+TGG | + | chr8_2:50168315-50168334 | Msa1253000:intron | 25.0% |
| !!! | TTTCTCTGAAATTATGGTTA+GGG | + | chr8_2:50168475-50168494 | Msa1253000:intron | 25.0% |
| ! | ATATGAGATATACTCATTGT+AGG | - | chr8_2:50168856-50168875 | None:intergenic | 25.0% |
| ! | CATTCTGCATTACAAATATT+AGG | - | chr8_2:50168986-50169005 | None:intergenic | 25.0% |
| ! | CTAATATTTGTAATGCAGAA+TGG | + | chr8_2:50168984-50169003 | Msa1253000:intron | 25.0% |
| CTTATACAAGAATTCAAGTG+AGG | + | chr8_2:50166077-50166096 | Msa1253000:CDS | 30.0% | |
| AAAGTGGTTAACAAATGAAG+AGG | + | chr8_2:50166218-50166237 | Msa1253000:intron | 30.0% | |
| ! | CTAAAGGAATTTGCTTGATT+TGG | + | chr8_2:50166355-50166374 | Msa1253000:intron | 30.0% |
| !! | AATTTGCTTGATTTGGTTTC+AGG | + | chr8_2:50166362-50166381 | Msa1253000:intron | 30.0% |
| !! | ATTTGCTTGATTTGGTTTCA+GGG | + | chr8_2:50166363-50166382 | Msa1253000:intron | 30.0% |
| GATACAATTCATCAAGCAAA+GGG | + | chr8_2:50166385-50166404 | Msa1253000:intron | 30.0% | |
| TTCATAGTAGACTATCACAA+AGG | + | chr8_2:50166409-50166428 | Msa1253000:intron | 30.0% | |
| !! | CACTCTTTAAGACCTTTAAA+AGG | + | chr8_2:50166557-50166576 | Msa1253000:intron | 30.0% |
| ! | GAACTTCTGAAAAATAGCTT+AGG | - | chr8_2:50166789-50166808 | None:intergenic | 30.0% |
| !! | AATGGTTCTAGATGGATAAT+TGG | + | chr8_2:50166856-50166875 | Msa1253000:intron | 30.0% |
| AAATATGTCTGTAATATCCG+AGG | + | chr8_2:50167061-50167080 | Msa1253000:CDS | 30.0% | |
| AATATGTCTGTAATATCCGA+GGG | + | chr8_2:50167062-50167081 | Msa1253000:CDS | 30.0% | |
| GTGAAATCACAACAAAGATA+TGG | - | chr8_2:50167187-50167206 | None:intergenic | 30.0% | |
| ! | TTTGATTTCGTTATTGATGC+AGG | + | chr8_2:50167376-50167395 | Msa1253000:intron | 30.0% |
| TTGTATATACCTCAATTCAG+AGG | - | chr8_2:50167441-50167460 | None:intergenic | 30.0% | |
| TGTCAATCAATCACAATTGT+TGG | + | chr8_2:50167472-50167491 | Msa1253000:intron | 30.0% | |
| ! | ATTTGGTACTCTTTATTTGC+AGG | + | chr8_2:50167633-50167652 | Msa1253000:intron | 30.0% |
| AATAGAATCTGTTCACATGT+TGG | + | chr8_2:50167697-50167716 | Msa1253000:CDS | 30.0% | |
| !! | TATTTCCTCCAAACTAGTTT+TGG | + | chr8_2:50167983-50168002 | Msa1253000:CDS | 30.0% |
| CAAAATCCAATATATGTCGA+AGG | + | chr8_2:50168031-50168050 | Msa1253000:CDS | 30.0% | |
| ! | AGACTCTACTATTCAAGTTA+AGG | + | chr8_2:50168054-50168073 | Msa1253000:CDS | 30.0% |
| ATCCATAAACCTAATTGACT+TGG | + | chr8_2:50168105-50168124 | Msa1253000:CDS | 30.0% | |
| ATCCAAGTCAATTAGGTTTA+TGG | - | chr8_2:50168110-50168129 | None:intergenic | 30.0% | |
| !! | ATAAACCTAATTGACTTGGA+TGG | + | chr8_2:50168109-50168128 | Msa1253000:CDS | 30.0% |
| ! | ATAGAGTCAGAGGTATAATA+TGG | + | chr8_2:50168305-50168324 | Msa1253000:intron | 30.0% |
| !!! | TTTTGTTTTTGTGGAACTAC+AGG | + | chr8_2:50168376-50168395 | Msa1253000:intron | 30.0% |
| TAATCTGAAAGATGATAGAG+AGG | + | chr8_2:50168420-50168439 | Msa1253000:CDS | 30.0% | |
| !! | GTTTCTCTGAAATTATGGTT+AGG | + | chr8_2:50168474-50168493 | Msa1253000:intron | 30.0% |
| !! | TTCTCTGAAATTATGGTTAG+GGG | + | chr8_2:50168476-50168495 | Msa1253000:intron | 30.0% |
| ! | TTTACTGGTTAGTGATTGAA+TGG | - | chr8_2:50168672-50168691 | None:intergenic | 30.0% |
| CCTCTGCATAATTAATTTAC+TGG | - | chr8_2:50168687-50168706 | None:intergenic | 30.0% | |
| CCAGTAAATTAATTATGCAG+AGG | + | chr8_2:50168684-50168703 | Msa1253000:intron | 30.0% | |
| AATTAATTATGCAGAGGACA+AGG | + | chr8_2:50168690-50168709 | Msa1253000:intron | 30.0% | |
| !! | TTAATTTGTCCTTCATGAAC+AGG | + | chr8_2:50169109-50169128 | Msa1253000:CDS | 30.0% |
| ! | AATCCTCATTTTGCTTATGA+AGG | - | chr8_2:50169167-50169186 | None:intergenic | 30.0% |
| TGAGGATTTGATTGATGAAA+AGG | + | chr8_2:50169179-50169198 | Msa1253000:CDS | 30.0% | |
| ! | ACATTGATGGATAACCCTAT+TGG | + | chr8_2:50166114-50166133 | Msa1253000:CDS | 35.0% |
| !! | TTGGTATTGGTACTCCAATA+GGG | - | chr8_2:50166131-50166150 | None:intergenic | 35.0% |
| GGATACAATTCATCAAGCAA+AGG | + | chr8_2:50166384-50166403 | Msa1253000:intron | 35.0% | |
| CTGAAAAATAGCTTAGGACA+TGG | - | chr8_2:50166783-50166802 | None:intergenic | 35.0% | |
| AATTGATCCTTTACCAGCAA+TGG | + | chr8_2:50166838-50166857 | Msa1253000:intron | 35.0% | |
| AGATGGATAATTGGTAAGAG+TGG | + | chr8_2:50166865-50166884 | Msa1253000:intron | 35.0% | |
| AATTATGCAAGACGATCCTA+AGG | + | chr8_2:50167088-50167107 | Msa1253000:CDS | 35.0% | |
| GTTGAATAATCATTCGCCTT+AGG | - | chr8_2:50167107-50167126 | None:intergenic | 35.0% | |
| GATTGTTGAACTTCATCAAC+AGG | - | chr8_2:50167271-50167290 | None:intergenic | 35.0% | |
| AGTTTGATGTAAGCAAACCT+TGG | - | chr8_2:50167311-50167330 | None:intergenic | 35.0% | |
| ! | TACTCTTTATTTGCAGGCAA+AGG | + | chr8_2:50167639-50167658 | Msa1253000:intron | 35.0% |
| ATTGTTATCACCATTCTGAG+TGG | - | chr8_2:50167723-50167742 | None:intergenic | 35.0% | |
| !! | TGAATGCACCCTTTTGATTA+AGG | - | chr8_2:50167781-50167800 | None:intergenic | 35.0% |
| ATTGACGAAGACGAATTTGA+TGG | - | chr8_2:50167809-50167828 | None:intergenic | 35.0% | |
| TGGAGGAAATAATCTTCTTG+AGG | - | chr8_2:50167974-50167993 | None:intergenic | 35.0% | |
| !!! | TCCAAACTAGTTTTGGTGAA+GGG | + | chr8_2:50167990-50168009 | Msa1253000:CDS | 35.0% |
| TTGGTGAAGGGAATGAAAAT+TGG | + | chr8_2:50168002-50168021 | Msa1253000:CDS | 35.0% | |
| CTAAACCATCCAAGTCAATT+AGG | - | chr8_2:50168117-50168136 | None:intergenic | 35.0% | |
| GAAGCTGAGCTCAAATATAT+TGG | - | chr8_2:50168154-50168173 | None:intergenic | 35.0% | |
| GAAAGCTCATGGAATAAAGT+TGG | + | chr8_2:50168262-50168281 | Msa1253000:CDS | 35.0% | |
| AGTTTGGAAAATAGAGTCAG+AGG | + | chr8_2:50168295-50168314 | Msa1253000:CDS | 35.0% | |
| ! | TTTTGTGGAACTACAGGTTT+CGG | + | chr8_2:50168382-50168401 | Msa1253000:intron | 35.0% |
| ! | GGGGTTTGAACAAGATATTT+TGG | + | chr8_2:50168495-50168514 | Msa1253000:intron | 35.0% |
| ! | TCTGTAACATCAGCTATTTC+AGG | + | chr8_2:50168586-50168605 | Msa1253000:CDS | 35.0% |
| AGAATGCCACAAAAAAACGT+AGG | + | chr8_2:50168713-50168732 | Msa1253000:CDS | 35.0% | |
| GAATGCCACAAAAAAACGTA+GGG | + | chr8_2:50168714-50168733 | Msa1253000:CDS | 35.0% | |
| ! | TGATGTCATTTAAACGACGA+TGG | + | chr8_2:50168813-50168832 | Msa1253000:intron | 35.0% |
| ! | TCAAGATAGCTTGCATATCA+GGG | - | chr8_2:50169047-50169066 | None:intergenic | 35.0% |
| ! | TTCAAGATAGCTTGCATATC+AGG | - | chr8_2:50169048-50169067 | None:intergenic | 35.0% |
| TGAACAAACAAAGCAGATAG+AGG | + | chr8_2:50169140-50169159 | Msa1253000:CDS | 35.0% | |
| TTGTTTCAATCTCTTCCAGA+AGG | - | chr8_2:50169209-50169228 | None:intergenic | 35.0% | |
| !! | GTTGGTATTGGTACTCCAAT+AGG | - | chr8_2:50166132-50166151 | None:intergenic | 40.0% |
| !! | AAGCTTTAGAACAGACAGTG+AGG | + | chr8_2:50166185-50166204 | Msa1253000:CDS | 40.0% |
| GTGAGGAACTCTTCAAAAAG+TGG | + | chr8_2:50166202-50166221 | Msa1253000:intron | 40.0% | |
| ! | TCTAGAACCATTGCTGGTAA+AGG | - | chr8_2:50166848-50166867 | None:intergenic | 40.0% |
| !! | TTACCAGCAATGGTTCTAGA+TGG | + | chr8_2:50166848-50166867 | Msa1253000:intron | 40.0% |
| ! | TATCCATCTAGAACCATTGC+TGG | - | chr8_2:50166854-50166873 | None:intergenic | 40.0% |
| GTCTTGCATAATTCTTCCCT+CGG | - | chr8_2:50167081-50167100 | None:intergenic | 40.0% | |
| !! | TCCTTTAGGGTAATTGTCGT+AGG | + | chr8_2:50167142-50167161 | Msa1253000:intron | 40.0% |
| !! | CCTTTAGGGTAATTGTCGTA+GGG | + | chr8_2:50167143-50167162 | Msa1253000:intron | 40.0% |
| CAACAAAGATATGGCATAGC+AGG | - | chr8_2:50167178-50167197 | None:intergenic | 40.0% | |
| AACTTCATCAACAGGTTCTC+TGG | - | chr8_2:50167263-50167282 | None:intergenic | 40.0% | |
| CTTGGCAAGAAACAAGTTAC+TGG | - | chr8_2:50167293-50167312 | None:intergenic | 40.0% | |
| !! | CAGTAACTTGTTTCTTGCCA+AGG | + | chr8_2:50167291-50167310 | Msa1253000:intron | 40.0% |
| ! | CTTTGCTGAATCTGAAGCAT+TGG | + | chr8_2:50167331-50167350 | Msa1253000:intron | 40.0% |
| TTTCGTTATTGATGCAGGCT+TGG | + | chr8_2:50167381-50167400 | Msa1253000:intron | 40.0% | |
| ! | CTTCACCAAAACTAGTTTGG+AGG | - | chr8_2:50167991-50168010 | None:intergenic | 40.0% |
| !!! | CTCCAAACTAGTTTTGGTGA+AGG | + | chr8_2:50167989-50168008 | Msa1253000:CDS | 40.0% |
| TCCCTTCACCAAAACTAGTT+TGG | - | chr8_2:50167994-50168013 | None:intergenic | 40.0% | |
| GAGTCTCCTTCGACATATAT+TGG | - | chr8_2:50168040-50168059 | None:intergenic | 40.0% | |
| GCAGCAATAGAAGATTCACT+TGG | - | chr8_2:50168178-50168197 | None:intergenic | 40.0% | |
| !! | TTAGTCTCTACTGGTTTCGA+TGG | + | chr8_2:50168202-50168221 | Msa1253000:CDS | 40.0% |
| ATGAGCTTTCACAAAGAGTC+TGG | - | chr8_2:50168252-50168271 | None:intergenic | 40.0% | |
| AGACTCTTTGTGAAAGCTCA+TGG | + | chr8_2:50168251-50168270 | Msa1253000:CDS | 40.0% | |
| AGCTCATGGAATAAAGTTGG+AGG | + | chr8_2:50168265-50168284 | Msa1253000:CDS | 40.0% | |
| ! | AGTTGGAGGAAGTACAAGTT+TGG | + | chr8_2:50168279-50168298 | Msa1253000:CDS | 40.0% |
| ! | TGTCATTTAAACGACGATGG+AGG | + | chr8_2:50168816-50168835 | Msa1253000:intron | 40.0% |
| TTTGTAATGCAGAATGGCTG+AGG | + | chr8_2:50168990-50169009 | Msa1253000:intron | 40.0% | |
| ! | AAGATAGCTTGCATATCAGG+GGG | - | chr8_2:50169045-50169064 | None:intergenic | 40.0% |
| ! | CAAGATAGCTTGCATATCAG+GGG | - | chr8_2:50169046-50169065 | None:intergenic | 40.0% |
| ATGATCGAACTTCCTTCTCA+AGG | - | chr8_2:50169083-50169102 | None:intergenic | 40.0% | |
| TTTGTCCTTCATGAACAGGA+AGG | + | chr8_2:50169113-50169132 | Msa1253000:CDS | 40.0% | |
| AGAATCCTTCCTGTTCATGA+AGG | - | chr8_2:50169121-50169140 | None:intergenic | 40.0% | |
| GGACCTTCATAAGCAAAATG+AGG | + | chr8_2:50169161-50169180 | Msa1253000:CDS | 40.0% | |
| ! | TGGAGTACCAATACCAACCA+TGG | + | chr8_2:50166134-50166153 | Msa1253000:CDS | 45.0% |
| AAACTTGGCATGTCCATGGT+TGG | - | chr8_2:50166150-50166169 | None:intergenic | 45.0% | |
| CTTGAAACTTGGCATGTCCA+TGG | - | chr8_2:50166154-50166173 | None:intergenic | 45.0% | |
| CATGGACATGCCAAGTTTCA+AGG | + | chr8_2:50166152-50166171 | Msa1253000:CDS | 45.0% | |
| TGAGAAACCGCCTTGAAACT+TGG | - | chr8_2:50166165-50166184 | None:intergenic | 45.0% | |
| !! | AAAGGTCTTAAAGAGTGCCC+CGG | - | chr8_2:50166554-50166573 | None:intergenic | 45.0% |
| CCCTACGACAATTACCCTAA+AGG | - | chr8_2:50167146-50167165 | None:intergenic | 45.0% | |
| GAAGTCGATCCTCTGAATTG+AGG | + | chr8_2:50167429-50167448 | Msa1253000:intron | 45.0% | |
| !! | CTTGTGCTACTTGAGCATTG+TGG | - | chr8_2:50167676-50167695 | None:intergenic | 45.0% |
| CACAATGCTCAAGTAGCACA+AGG | + | chr8_2:50167674-50167693 | Msa1253000:CDS | 45.0% | |
| AGCAGCCAAATAGCGAAACA+AGG | + | chr8_2:50167917-50167936 | Msa1253000:CDS | 45.0% | |
| ! | GCTGCAACATTAGTCTCTAC+TGG | + | chr8_2:50168193-50168212 | Msa1253000:CDS | 45.0% |
| ! | AGAGTCTGGCTTGATATGCA+TGG | - | chr8_2:50168238-50168257 | None:intergenic | 45.0% |
| TGCCACAAAAAAACGTAGGG+TGG | + | chr8_2:50168717-50168736 | Msa1253000:CDS | 45.0% | |
| !!! | CTCCACCCTACGTTTTTTTG+TGG | - | chr8_2:50168722-50168741 | None:intergenic | 45.0% |
| TGATGAAAAGGAACGCCTTC+TGG | + | chr8_2:50169191-50169210 | Msa1253000:CDS | 45.0% | |
| ! | GGCATGTCCATGGTTGGTAT+TGG | - | chr8_2:50166144-50166163 | None:intergenic | 50.0% |
| GGACATGCCAAGTTTCAAGG+CGG | + | chr8_2:50166155-50166174 | Msa1253000:CDS | 50.0% | |
| GAAATGTTAACGAGTGCCCC+CGG | + | chr8_2:50166532-50166551 | Msa1253000:intron | 50.0% | |
| AAATGTTAACGAGTGCCCCC+GGG | + | chr8_2:50166533-50166552 | Msa1253000:intron | 50.0% | |
| !! | AAGGTCTTAAAGAGTGCCCC+GGG | - | chr8_2:50166553-50166572 | None:intergenic | 50.0% |
| !! | GGAATGCTTAAAGAGTGCCC+CGG | + | chr8_2:50166661-50166680 | Msa1253000:intron | 50.0% |
| !! | GAATGCTTAAAGAGTGCCCC+GGG | + | chr8_2:50166662-50166681 | Msa1253000:intron | 50.0% |
| !! | AATGCTTAAAGAGTGCCCCG+GGG | + | chr8_2:50166663-50166682 | Msa1253000:intron | 50.0% |
| CACATGTTGGCCACTCAGAA+TGG | + | chr8_2:50167710-50167729 | Msa1253000:CDS | 50.0% | |
| !! | CCACGCCTTGTTTCGCTATT+TGG | - | chr8_2:50167925-50167944 | None:intergenic | 50.0% |
| CCAAATAGCGAAACAAGGCG+TGG | + | chr8_2:50167922-50167941 | Msa1253000:CDS | 50.0% | |
| ! | ACTGGTTTCGATGGATGCGA+CGG | + | chr8_2:50168211-50168230 | Msa1253000:CDS | 50.0% |
| ATGCAGAATGGCTGAGGCAA+AGG | + | chr8_2:50168996-50169015 | Msa1253000:intron | 50.0% | |
| GAATGGCTGAGGCAAAGGAA+AGG | + | chr8_2:50169001-50169020 | Msa1253000:intron | 50.0% | |
| TGCATATCAGGGGGAATGGA+TGG | - | chr8_2:50169036-50169055 | None:intergenic | 50.0% | |
| AGCTTGCATATCAGGGGGAA+TGG | - | chr8_2:50169040-50169059 | None:intergenic | 50.0% | |
| AATGTTAACGAGTGCCCCCG+GGG | + | chr8_2:50166534-50166553 | Msa1253000:intron | 55.0% | |
| !! | AGGTCTTAAAGAGTGCCCCG+GGG | - | chr8_2:50166552-50166571 | None:intergenic | 55.0% |
| !! | ATGCTTAAAGAGTGCCCCGG+GGG | + | chr8_2:50166664-50166683 | Msa1253000:intron | 55.0% |
| TCTTGTTAACGAGTGCCCCC+GGG | - | chr8_2:50166682-50166701 | None:intergenic | 55.0% | |
| ! | GTCTTGTTAACGAGTGCCCC+CGG | - | chr8_2:50166683-50166702 | None:intergenic | 55.0% |
| TAAACGACGATGGAGGCGAG+TGG | + | chr8_2:50168823-50168842 | Msa1253000:intron | 55.0% | |
| GCGATGCGAAGACCTTGAGA+AGG | + | chr8_2:50169068-50169087 | Msa1253000:CDS | 55.0% | |
| !! | GGTCTTAAAGAGTGCCCCGG+GGG | - | chr8_2:50166551-50166570 | None:intergenic | 60.0% |
| CTTGTTAACGAGTGCCCCCG+GGG | - | chr8_2:50166681-50166700 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_2 | gene | 50166054 | 50169254 | 50166054 | ID=Msa1253000;Name=Msa1253000 |
| chr8_2 | mRNA | 50166054 | 50169254 | 50166054 | ID=Msa1253000-mRNA-1;Parent=Msa1253000;Name=Msa1253000-mRNA-1;_AED=0.11;_eAED=0.12;_QI=0|0.12|0|1|0.62|0.66|9|0|435 |
| chr8_2 | exon | 50166054 | 50166220 | 50166054 | ID=Msa1253000-mRNA-1:exon:15244;Parent=Msa1253000-mRNA-1 |
| chr8_2 | exon | 50167025 | 50167150 | 50167025 | ID=Msa1253000-mRNA-1:exon:15245;Parent=Msa1253000-mRNA-1 |
| chr8_2 | exon | 50167655 | 50167877 | 50167655 | ID=Msa1253000-mRNA-1:exon:15246;Parent=Msa1253000-mRNA-1 |
| chr8_2 | exon | 50167911 | 50168130 | 50167911 | ID=Msa1253000-mRNA-1:exon:15247;Parent=Msa1253000-mRNA-1 |
| chr8_2 | exon | 50168137 | 50168316 | 50168137 | ID=Msa1253000-mRNA-1:exon:15248;Parent=Msa1253000-mRNA-1 |
| chr8_2 | exon | 50168398 | 50168441 | 50168398 | ID=Msa1253000-mRNA-1:exon:15249;Parent=Msa1253000-mRNA-1 |
| chr8_2 | exon | 50168562 | 50168607 | 50168562 | ID=Msa1253000-mRNA-1:exon:15250;Parent=Msa1253000-mRNA-1 |
| chr8_2 | exon | 50168704 | 50168752 | 50168704 | ID=Msa1253000-mRNA-1:exon:15251;Parent=Msa1253000-mRNA-1 |
| chr8_2 | exon | 50169002 | 50169254 | 50169002 | ID=Msa1253000-mRNA-1:exon:15252;Parent=Msa1253000-mRNA-1 |
| chr8_2 | CDS | 50166054 | 50166220 | 50166054 | ID=Msa1253000-mRNA-1:cds;Parent=Msa1253000-mRNA-1 |
| chr8_2 | CDS | 50167025 | 50167150 | 50167025 | ID=Msa1253000-mRNA-1:cds;Parent=Msa1253000-mRNA-1 |
| chr8_2 | CDS | 50167655 | 50167877 | 50167655 | ID=Msa1253000-mRNA-1:cds;Parent=Msa1253000-mRNA-1 |
| chr8_2 | CDS | 50167911 | 50168130 | 50167911 | ID=Msa1253000-mRNA-1:cds;Parent=Msa1253000-mRNA-1 |
| chr8_2 | CDS | 50168137 | 50168316 | 50168137 | ID=Msa1253000-mRNA-1:cds;Parent=Msa1253000-mRNA-1 |
| chr8_2 | CDS | 50168398 | 50168441 | 50168398 | ID=Msa1253000-mRNA-1:cds;Parent=Msa1253000-mRNA-1 |
| chr8_2 | CDS | 50168562 | 50168607 | 50168562 | ID=Msa1253000-mRNA-1:cds;Parent=Msa1253000-mRNA-1 |
| chr8_2 | CDS | 50168704 | 50168752 | 50168704 | ID=Msa1253000-mRNA-1:cds;Parent=Msa1253000-mRNA-1 |
| chr8_2 | CDS | 50169002 | 50169254 | 50169002 | ID=Msa1253000-mRNA-1:cds;Parent=Msa1253000-mRNA-1 |
| Gene Sequence |
| Protein sequence |
