AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1339990

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1339990 MtrunA17_Chr4g0053781 98.151 757 14 0 1 757 1 757 0.0 1528
Msa1339990 MtrunA17_Chr5g0401511 67.414 758 238 3 7 756 6 762 0.0 1065
Msa1339990 MtrunA17_Chr4g0020651 66.048 754 248 2 11 756 5 758 0.0 1023
Msa1339990 MtrunA17_Chr1g0152771 62.812 761 270 6 7 756 6 764 0.0 985
Msa1339990 MtrunA17_Chr3g0134621 63.772 737 230 4 27 756 31 737 0.0 946
Msa1339990 MtrunA17_Chr1g0204321 51.114 763 349 7 14 756 20 778 0.0 798
Msa1339990 MtrunA17_Chr2g0300751 52.835 776 333 11 8 756 5 774 0.0 789
Msa1339990 MtrunA17_Chr8g0344331 53.271 749 319 15 30 756 37 776 0.0 757
Msa1339990 MtrunA17_Chr4g0037221 51.272 747 339 12 27 755 29 768 0.0 753
Msa1339990 MtrunA17_Chr4g0070391 51.262 753 345 10 13 756 14 753 0.0 723
Msa1339990 MtrunA17_Chr8g0344971 48.320 774 356 13 9 755 4 760 0.0 698
Msa1339990 MtrunA17_Chr7g0246461 43.742 775 369 10 13 757 5 742 0.0 650
Msa1339990 MtrunA17_Chr7g0262161 46.247 746 375 13 30 757 26 763 0.0 640
Msa1339990 MtrunA17_Chr3g0120521 45.686 707 356 13 64 754 75 769 0.0 608
Msa1339990 MtrunA17_Chr4g0076611 46.045 708 350 14 64 754 1 693 0.0 594
Msa1339990 MtrunA17_Chr4g0057061 44.177 747 376 18 25 756 56 776 0.0 572
Msa1339990 MtrunA17_Chr7g0250481 43.406 781 376 24 28 754 29 797 0.0 565
Msa1339990 MtrunA17_Chr4g0057481 45.199 677 350 12 93 756 23 691 0.0 564
Msa1339990 MtrunA17_Chr4g0057471 43.626 706 376 13 64 755 12 709 0.0 559
Msa1339990 MtrunA17_Chr5g0398351 43.614 736 377 12 30 754 25 733 0.0 557
Msa1339990 MtrunA17_Chr5g0398351 43.148 737 380 13 30 754 795 1504 2.41e-179 553
Msa1339990 MtrunA17_Chr5g0398241 43.691 737 376 13 30 754 44 753 0.0 552
Msa1339990 MtrunA17_Chr1g0189251 40.526 760 414 12 15 755 14 754 0.0 548
Msa1339990 MtrunA17_Chr8g0345981 42.667 750 385 17 31 755 29 758 0.0 548
Msa1339990 MtrunA17_Chr8g0345971 40.915 765 409 13 15 755 14 759 0.0 544
Msa1339990 MtrunA17_Chr5g0398401 43.284 737 379 13 30 754 44 753 0.0 543
Msa1339990 MtrunA17_Chr8g0345991 42.457 749 384 18 31 755 29 754 0.0 541
Msa1339990 MtrunA17_Chr5g0398331 42.781 748 385 15 19 754 34 750 0.0 540
Msa1339990 MtrunA17_Chr4g0026641 43.137 765 391 21 14 755 11 754 0.0 540
Msa1339990 MtrunA17_Chr4g0057531 42.655 708 381 12 64 754 77 776 0.0 538
Msa1339990 MtrunA17_Chr1g0189561 41.538 780 412 22 1 755 1 761 2.43e-179 532
Msa1339990 MtrunA17_Chr5g0398311 42.570 747 384 14 19 754 34 746 4.09e-179 531
Msa1339990 MtrunA17_Chr7g0248871 41.419 775 400 22 13 755 12 764 4.26e-178 529
Msa1339990 MtrunA17_Chr5g0407701 41.098 747 391 21 31 754 29 749 3.98e-177 526
Msa1339990 MtrunA17_Chr2g0285121 41.444 748 384 18 51 756 49 784 7.75e-177 526
Msa1339990 MtrunA17_Chr5g0423261 45.469 629 326 12 138 756 2 623 1.41e-176 520
Msa1339990 MtrunA17_Chr4g0057491 44.817 627 331 10 139 756 3 623 1.44e-176 520
Msa1339990 MtrunA17_Chr2g0285111 41.356 752 383 20 46 756 53 787 1.47e-175 523
Msa1339990 MtrunA17_Chr8g0377961 40.658 760 390 20 29 754 42 774 2.33e-175 522
Msa1339990 MtrunA17_Chr7g0276151 39.818 771 415 15 8 755 12 756 8.37e-175 520
Msa1339990 MtrunA17_Chr8g0369891 39.947 751 391 21 31 754 35 752 3.02e-173 516
Msa1339990 MtrunA17_Chr7g0250411 40.793 782 407 23 13 754 18 783 5.57e-171 511
Msa1339990 MtrunA17_Chr7g0250371 41.229 781 406 23 13 754 18 784 1.12e-170 510
Msa1339990 MtrunA17_Chr8g0345961 40.285 772 411 19 9 755 11 757 1.17e-170 509
Msa1339990 MtrunA17_Chr2g0303881 42.588 742 381 18 38 755 6 726 3.45e-170 507
Msa1339990 MtrunA17_Chr7g0250391 41.244 788 413 24 5 754 7 782 2.78e-168 504
Msa1339990 MtrunA17_Chr4g0057511 44.391 624 328 12 143 756 3 617 1.47e-167 496
Msa1339990 MtrunA17_Chr7g0250331 40.788 787 396 24 28 754 30 806 1.44e-166 500
Msa1339990 MtrunA17_Chr4g0057461 43.691 634 333 15 139 755 3 629 2.46e-166 494
Msa1339990 MtrunA17_Chr7g0266051 40.222 721 389 17 45 754 16 705 2.66e-162 486
Msa1339990 MtrunA17_Chr8g0351011 39.678 746 394 20 28 754 43 751 3.12e-160 482
Msa1339990 MtrunA17_Chr7g0227991 37.918 778 406 23 3 755 9 734 4.77e-156 471
Msa1339990 MtrunA17_Chr3g0143251 39.236 785 400 24 14 755 15 765 6.95e-156 471
Msa1339990 MtrunA17_Chr6g0470881 38.292 773 394 26 9 754 13 729 5.93e-154 465
Msa1339990 MtrunA17_Chr3g0136151 38.267 750 413 18 31 755 38 762 4.43e-153 464
Msa1339990 MtrunA17_Chr8g0354771 36.472 754 445 15 20 748 13 757 2.74e-152 462
Msa1339990 MtrunA17_Chr6g0470851 37.731 758 406 25 16 754 19 729 5.24e-152 460
Msa1339990 MtrunA17_Chr8g0334521 37.354 771 402 24 11 754 17 733 2.46e-150 456
Msa1339990 MtrunA17_Chr7g0246451 39.515 701 382 17 64 754 77 745 4.20e-149 453
Msa1339990 MtrunA17_Chr5g0439271 42.645 605 310 14 176 754 8 601 4.43e-146 441
Msa1339990 MtrunA17_Chr3g0079971 38.722 767 381 27 20 754 22 731 8.77e-146 444
Msa1339990 MtrunA17_Chr1g0170081 36.566 763 401 25 20 754 23 730 7.56e-145 442
Msa1339990 MtrunA17_Chr1g0146271 37.120 757 397 22 22 754 31 732 9.11e-145 442
Msa1339990 MtrunA17_Chr8g0354741 40.376 639 340 14 133 755 21 634 2.27e-144 437
Msa1339990 MtrunA17_Chr1g0146251 37.726 774 401 28 10 754 13 734 4.26e-143 437
Msa1339990 MtrunA17_Chr7g0248861 41.042 614 321 13 24 610 23 622 1.77e-141 437
Msa1339990 MtrunA17_Chr7g0248861 52.610 249 105 5 115 353 614 859 1.05e-63 228
Msa1339990 MtrunA17_Chr8g0334491 35.419 751 415 22 22 754 29 727 4.71e-134 414
Msa1339990 MtrunA17_Chr8g0376841 41.208 563 293 14 28 572 39 581 1.33e-129 397
Msa1339990 MtrunA17_Chr4g0071871 34.026 770 409 29 22 729 57 789 2.73e-103 335
Msa1339990 MtrunA17_Chr2g0301011 37.814 558 261 19 92 640 3 483 2.83e-102 323
Msa1339990 MtrunA17_Chr5g0447171 37.428 521 252 11 288 754 7 507 5.85e-102 323
Msa1339990 MtrunA17_Chr2g0298601 33.947 760 413 30 22 724 57 784 3.92e-98 322
Msa1339990 MtrunA17_Chr7g0261691 47.774 337 162 6 135 461 13 345 6.40e-95 299
Msa1339990 MtrunA17_Chr4g0075331 32.258 682 402 19 49 684 1 668 4.85e-87 290
Msa1339990 MtrunA17_Chr8g0380961 32.852 761 437 27 51 754 102 845 8.35e-87 292
Msa1339990 MtrunA17_Chr2g0302951 31.459 747 437 22 65 754 110 838 1.00e-85 289
Msa1339990 MtrunA17_Chr3g0143241 38.771 472 249 15 14 461 15 470 1.47e-84 278
Msa1339990 MtrunA17_Chr7g0250461 38.074 457 252 13 13 442 18 470 9.10e-83 272
Msa1339990 MtrunA17_Chr4g0026651 46.026 302 126 6 79 347 2 299 6.54e-77 250
Msa1339990 MtrunA17_Chr6g0480721 42.593 324 165 6 64 381 5 313 9.08e-77 260
Msa1339990 MtrunA17_Chr6g0480721 38.387 310 164 8 453 754 309 599 3.49e-51 189
Msa1339990 MtrunA17_Chr7g0261701 46.831 284 135 8 474 754 19 289 2.03e-74 243
Msa1339990 MtrunA17_Chr7g0250441 49.110 281 133 6 477 754 9 282 3.49e-72 238
Msa1339990 MtrunA17_Chr4g0035881 40.710 366 158 8 214 572 4 317 3.97e-71 235
Msa1339990 MtrunA17_Chr3g0097061 41.195 318 158 8 92 401 3 299 1.61e-66 227
Msa1339990 MtrunA17_Chr3g0097061 40.833 120 63 1 531 650 330 441 1.74e-22 101
Msa1339990 MtrunA17_Chr8g0346361 37.952 332 179 10 431 754 184 496 2.63e-58 206
Msa1339990 MtrunA17_Chr8g0346361 45.545 202 91 4 152 351 4 188 4.03e-47 175
Msa1339990 MtrunA17_Chr3g0103071 38.298 282 163 5 262 535 1 279 7.79e-56 192
Msa1339990 MtrunA17_Chr4g0026661 42.692 260 134 8 500 755 12 260 8.19e-54 186
Msa1339990 MtrunA17_Chr3g0105461 39.863 291 126 5 64 347 69 317 3.37e-53 188
Msa1339990 MtrunA17_Chr3g0105451 40.136 294 145 10 465 751 6 275 1.60e-52 183
Msa1339990 MtrunA17_Chr2g0301911 36.413 368 181 13 152 503 30 360 7.97e-52 185
Msa1339990 MtrunA17_Chr2g0312861 41.699 259 136 8 500 755 1 247 1.42e-51 182
Msa1339990 MtrunA17_Chr2g0301031 41.085 258 137 8 500 754 1 246 1.99e-51 179
Msa1339990 MtrunA17_Chr3g0103061 37.269 271 144 8 1 254 1 262 5.69e-47 167
Msa1339990 MtrunA17_Chr2g0312841 44.388 196 91 4 152 345 9 188 1.42e-44 158
Msa1339990 MtrunA17_Chr4g0071191 39.899 198 100 3 470 662 46 229 3.13e-38 142
Msa1339990 MtrunA17_Chr5g0436021 45.181 166 78 2 177 339 31 186 4.94e-38 140
Msa1339990 MtrunA17_Chr2g0301921 40.092 217 115 9 541 754 1 205 3.80e-37 138
Msa1339990 MtrunA17_Chr2g0301021 30.216 417 167 15 8 401 9 324 1.59e-35 139
Msa1339990 MtrunA17_Chr5g0418921 45.522 134 72 1 471 603 3 136 7.58e-30 116
Msa1339990 MtrunA17_Chr3g0142981 39.286 196 68 5 180 359 32 192 1.41e-28 113
Msa1339990 MtrunA17_Chr3g0103081 37.908 153 78 6 608 754 1 142 4.66e-24 99.0
Msa1339990 MtrunA17_Chr3g0143231 55.556 90 39 1 483 572 1 89 3.14e-22 91.7
Msa1339990 MtrunA17_Chr5g0439281 31.892 185 106 6 14 178 13 197 2.42e-21 92.8
Msa1339990 MtrunA17_Chr5g0398341 46.316 95 50 1 541 635 1 94 3.88e-21 89.0
Msa1339990 MtrunA17_Chr3g0143021 41.000 100 59 0 64 163 7 106 1.15e-20 87.8
Msa1339990 MtrunA17_Chr3g0142971 53.409 88 36 2 483 568 1 85 9.23e-20 84.3
Msa1339990 MtrunA17_Chr7g0248851 37.500 152 86 6 608 755 1 147 1.33e-18 83.6
Msa1339990 MtrunA17_Chr5g0436031 35.088 171 93 7 595 757 23 183 3.60e-18 84.0
Msa1339990 MtrunA17_Chr3g0077671 56.338 71 30 1 531 600 236 306 5.95e-18 85.5
Msa1339990 MtrunA17_Chr8g0376851 33.333 162 105 3 595 754 11 171 1.53e-17 80.9
Msa1339990 MtrunA17_Chr4g0035871 32.143 140 91 2 41 176 11 150 1.03e-15 75.1
Msa1339990 MtrunA17_Chr3g0142961 36.641 131 76 5 589 714 10 138 4.82e-14 70.1
Msa1339990 MtrunA17_Chr8g0346351 30.345 145 94 3 11 151 17 158 3.21e-12 65.5
Msa1339990 MtrunA17_Chr3g0143011 59.184 49 20 0 300 348 1 49 4.68e-12 62.0
Msa1339990 MtrunA17_Chr8g0346961 36.585 123 66 7 570 686 1 117 1.35e-11 62.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1339990 AT5G67360.1 72.861 748 196 4 13 756 12 756 0.0 1130
Msa1339990 AT2G05920.1 56.599 735 305 9 28 757 27 752 0.0 820
Msa1339990 AT5G51750.1 52.500 760 341 10 14 756 20 776 0.0 798
Msa1339990 AT3G14067.1 51.958 766 341 13 9 756 13 769 0.0 773
Msa1339990 AT3G14240.1 51.409 745 342 11 30 755 27 770 0.0 752
Msa1339990 AT4G34980.1 49.539 759 361 11 13 755 7 759 0.0 734
Msa1339990 AT1G04110.1 44.631 773 395 14 10 755 5 771 0.0 631
Msa1339990 AT1G01900.1 45.308 746 386 10 25 757 38 774 0.0 620
Msa1339990 AT2G04160.1 45.751 706 358 13 64 754 75 770 0.0 603
Msa1339990 AT5G59810.1 43.576 755 383 18 26 754 37 774 0.0 574
Msa1339990 AT5G45650.2 41.019 785 387 20 28 755 24 789 1.97e-180 536
Msa1339990 AT5G45650.1 41.019 785 387 20 28 755 24 789 1.97e-180 536
Msa1339990 AT1G20160.1 39.820 776 424 19 3 755 7 762 4.90e-168 503
Msa1339990 AT1G20160.2 41.538 715 378 17 63 755 27 723 9.81e-167 498
Msa1339990 AT5G59120.1 40.351 741 386 18 28 754 29 727 5.84e-162 486
Msa1339990 AT4G10520.1 40.187 749 389 22 31 754 30 744 8.37e-161 484
Msa1339990 AT1G32960.1 41.601 762 392 24 24 754 26 765 6.48e-160 483
Msa1339990 AT5G03620.1 40.053 754 394 20 28 752 32 756 1.39e-159 481
Msa1339990 AT5G59090.1 38.753 738 396 17 31 754 33 728 4.21e-159 479
Msa1339990 AT4G10550.1 39.464 783 412 21 9 754 9 766 5.71e-159 480
Msa1339990 AT5G67090.1 37.834 748 413 15 11 743 5 715 2.40e-158 477
Msa1339990 AT4G10550.3 39.921 764 401 20 24 754 44 782 2.66e-158 479
Msa1339990 AT1G32940.1 41.046 765 392 21 24 754 23 762 8.55e-158 477
Msa1339990 AT5G59090.3 38.753 738 394 18 31 754 33 726 1.36e-157 475
Msa1339990 AT5G59090.2 38.618 738 392 17 31 754 33 723 1.38e-157 475
Msa1339990 AT1G32940.4 41.803 732 372 18 53 754 4 711 6.77e-157 473
Msa1339990 AT1G32940.2 41.803 732 372 18 53 754 4 711 6.77e-157 473
Msa1339990 AT4G10550.4 40.599 734 383 18 49 754 2 710 1.52e-156 472
Msa1339990 AT4G10550.2 40.599 734 383 18 49 754 2 710 1.52e-156 472
Msa1339990 AT1G32950.1 39.591 783 412 21 7 754 5 761 1.74e-155 471
Msa1339990 AT5G59190.1 39.447 687 367 16 46 724 14 659 2.50e-155 468
Msa1339990 AT4G10540.1 39.735 755 402 20 31 754 31 763 2.92e-154 468
Msa1339990 AT5G58840.1 38.836 739 376 21 28 754 32 706 1.18e-152 462
Msa1339990 AT4G10510.3 38.501 787 421 23 6 754 4 765 2.30e-152 463
Msa1339990 AT1G32950.2 40.463 734 379 19 53 754 3 710 3.79e-152 461
Msa1339990 AT4G10510.1 39.056 763 406 22 25 754 17 753 6.49e-152 461
Msa1339990 AT4G10510.4 39.944 716 383 17 64 754 16 709 1.90e-151 459
Msa1339990 AT4G10510.2 39.944 716 383 17 64 754 1 694 2.75e-151 458
Msa1339990 AT1G66210.1 38.309 757 410 19 13 747 23 744 2.30e-149 455
Msa1339990 AT3G46850.1 38.058 762 411 21 12 754 15 734 2.50e-149 454
Msa1339990 AT1G20150.1 37.076 766 434 19 21 755 23 771 2.53e-149 455
Msa1339990 AT3G46840.1 38.045 757 417 20 12 754 16 734 5.50e-149 453
Msa1339990 AT4G26330.2 39.889 722 392 20 60 754 15 721 1.09e-148 452
Msa1339990 AT5G59130.4 36.863 765 421 20 4 754 9 725 2.23e-147 449
Msa1339990 AT4G21630.1 38.372 774 399 22 15 754 24 753 3.72e-147 449
Msa1339990 AT4G00230.1 37.802 746 408 19 28 754 35 743 5.25e-147 448
Msa1339990 AT4G21650.1 38.402 776 397 22 17 754 28 760 1.01e-146 448
Msa1339990 AT5G58830.1 37.467 758 399 19 13 757 13 708 2.74e-146 445
Msa1339990 AT5G58820.1 37.973 740 380 18 28 754 27 700 2.77e-146 445
Msa1339990 AT4G10530.1 37.849 753 392 23 31 754 30 735 3.83e-146 446
Msa1339990 AT5G59130.3 37.378 717 396 16 46 754 15 686 4.91e-146 444
Msa1339990 AT5G11940.1 39.281 751 393 23 31 754 38 752 9.61e-146 446
Msa1339990 AT1G66220.1 35.807 768 437 18 8 754 12 744 1.01e-145 445
Msa1339990 AT5G59130.1 36.732 765 418 21 4 754 9 721 3.81e-145 443
Msa1339990 AT4G26330.1 39.130 736 392 21 60 754 15 735 1.01e-144 442
Msa1339990 AT5G59100.1 37.012 743 415 19 28 754 32 737 1.77e-144 441
Msa1339990 AT5G59130.2 36.601 765 413 21 4 754 9 715 8.66e-143 437
Msa1339990 AT5G45640.1 36.618 751 403 20 57 755 23 752 1.64e-140 432
Msa1339990 AT4G15040.2 38.504 722 384 18 44 754 13 685 3.60e-140 429
Msa1339990 AT4G15040.1 38.504 722 384 18 44 754 13 685 3.60e-140 429
Msa1339990 AT5G03620.2 44.029 561 281 13 28 572 32 575 2.77e-137 417
Msa1339990 AT1G32940.3 44.231 572 272 16 31 572 30 584 1.37e-128 396
Msa1339990 AT4G21326.1 37.483 723 392 18 55 754 2 687 1.58e-128 399
Msa1339990 AT4G21323.1 36.389 720 408 17 55 754 104 793 3.18e-124 390
Msa1339990 AT1G32970.1 38.839 672 358 17 102 754 85 722 9.84e-122 382
Msa1339990 AT4G00230.2 39.572 561 296 14 28 572 35 568 6.36e-119 370
Msa1339990 AT5G58840.3 38.989 554 275 14 28 572 32 531 9.44e-115 358
Msa1339990 AT1G20160.3 39.417 515 283 10 3 501 7 508 1.74e-106 337
Msa1339990 AT2G19170.1 33.202 762 419 30 21 724 52 781 1.12e-101 332
Msa1339990 AT2G19170.2 33.202 762 419 30 21 724 52 781 1.12e-101 332
Msa1339990 AT4G30020.3 31.932 761 429 25 22 724 53 782 1.70e-100 328
Msa1339990 AT4G30020.1 31.932 761 429 25 22 724 53 782 1.70e-100 328
Msa1339990 AT4G30020.4 31.932 761 429 25 22 724 53 782 1.70e-100 328
Msa1339990 AT4G30020.2 31.932 761 429 25 22 724 53 782 1.70e-100 328
Msa1339990 AT1G30600.1 32.181 752 429 27 65 756 98 828 2.48e-95 315
Msa1339990 AT4G20430.3 31.275 761 423 27 65 755 119 849 8.28e-92 306
Msa1339990 AT4G20430.1 31.275 761 423 27 65 755 119 849 8.28e-92 306
Msa1339990 AT5G44530.1 31.667 780 445 29 37 754 80 833 1.08e-91 305
Msa1339990 AT2G39850.1 33.288 742 403 28 64 754 65 765 1.62e-91 303
Msa1339990 AT4G20430.2 32.032 743 417 25 65 755 119 825 1.06e-90 303
Msa1339990 AT5G44530.2 30.683 805 445 30 37 754 80 858 1.46e-86 292
Msa1339990 AT5G58840.2 36.439 483 244 14 28 501 32 460 2.26e-83 273
Msa1339990 AT1G62340.1 33.439 628 354 19 65 635 98 718 1.78e-78 269
Msa1339990 AT4G21640.1 41.530 366 187 8 17 356 28 392 4.22e-78 266
Msa1339990 AT4G21640.1 40.193 311 160 9 452 754 435 727 2.91e-53 197
Msa1339990 AT5G44530.3 30.957 533 305 18 37 518 80 600 2.20e-58 209
Msa1339990 AT1G32980.1 43.316 187 99 4 537 721 3 184 2.84e-37 138
Msa1339990 AT5G59110.1 42.683 164 90 4 597 757 7 169 1.05e-29 116

Find 196 sgRNAs with CRISPR-Local

Find 462 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TAATCCCAACTAATCGAAAT+TGG 0.177317 tig0003618:-5007 Msa1339990:intergenic
CCTTTCCATGTTGTGGGTAT+AGG 0.188998 tig0003618:-3216 Msa1339990:intergenic
TCGTTGAAGCTCTTGCTTTC+AGG 0.213838 tig0003618:-3180 Msa1339990:intergenic
CATAAACCAAACCAGGATTA+AGG 0.242069 tig0003618:-4577 Msa1339990:intergenic
TACTGTAACGTTTACTTCTT+CGG 0.253950 tig0003618:+4913 Msa1339990:CDS
AGCTTCAACGATGCTGGATT+TGG 0.257105 tig0003618:+3192 Msa1339990:CDS
CGCTATTGACAAAGCTATTT+CGG 0.272079 tig0003618:+3545 Msa1339990:CDS
GTTCCCGACGCAAGCTTATT+CGG 0.317802 tig0003618:+3423 Msa1339990:CDS
TCAAGCAAACGGGCTTCTTC+TGG 0.322609 tig0003618:-2997 Msa1339990:intergenic
ACTGTAACGTTTACTTCTTC+GGG 0.323763 tig0003618:+4914 Msa1339990:CDS
ATCTTTCCCTGTAGCAATCT+TGG 0.324561 tig0003618:+2777 Msa1339990:CDS
ACAGCGGCTGGGCTCCATTC+AGG 0.326342 tig0003618:-4428 Msa1339990:intergenic
TCTTTGAAACTTAACTCTTC+AGG 0.330666 tig0003618:-4872 Msa1339990:intergenic
AGCTTATTCGGTTACGCATC+GGG 0.338167 tig0003618:+3435 Msa1339990:CDS
CCTCAGAAGTTGAATGGGTT+TGG 0.349984 tig0003618:+4944 Msa1339990:CDS
ATGATTCATACCACAAAGTA+TGG 0.353698 tig0003618:-2894 Msa1339990:intergenic
TGCAGCCCTTAATCCTGGTT+TGG 0.363173 tig0003618:+4571 Msa1339990:CDS
ATCGTCGTCTCGAGGAGATT+TGG 0.387802 tig0003618:-3358 Msa1339990:intergenic
GTTGAATGGGTTTGGAAGGT+TGG 0.387899 tig0003618:+4952 Msa1339990:CDS
AAGGGAGTTGAAGCCATGTT+AGG 0.392798 tig0003618:+3312 Msa1339990:CDS
GACTCTGTGGTTTCATCAAT+AGG 0.394062 tig0003618:-3336 Msa1339990:intergenic
CCTGTTGCAGCCCTTAATCC+TGG 0.394361 tig0003618:+4566 Msa1339990:CDS
CCAGGATTAAGGGCTGCAAC+AGG 0.395282 tig0003618:-4566 Msa1339990:intergenic
ATCAACGGTAACTGAGATTC+CGG 0.396754 tig0003618:-3843 Msa1339990:intergenic
ATCTGCGGGCTGATCGAATT+AGG 0.397042 tig0003618:-4230 Msa1339990:intergenic
CCATGATCAAACGGTGTAGA+AGG 0.397156 tig0003618:-4527 Msa1339990:intergenic
TTAACAGCGGATGATTATCT+AGG 0.397928 tig0003618:+4602 Msa1339990:CDS
TGGAAAGGCGCGTGTGAAAC+AGG 0.400648 tig0003618:+3231 Msa1339990:CDS
TTCAGAGACAGTGTAGCTAT+TGG 0.402314 tig0003618:+3618 Msa1339990:CDS
TCTTGTTCAGCTGGAAATGC+TGG 0.404183 tig0003618:+3675 Msa1339990:CDS
GTGAAAGCAGCCGGAGGATT+GGG 0.406312 tig0003618:+3999 Msa1339990:CDS
TTGCTGTTTATAAAGTTTGT+TGG 0.409964 tig0003618:+3490 Msa1339990:CDS
AATGTTCTGTCACTTTCTCT+TGG 0.413004 tig0003618:+3576 Msa1339990:CDS
ATTCTAGTTTCTTGTTCAGC+TGG 0.415966 tig0003618:+3666 Msa1339990:CDS
ATAAACCAAACCAGGATTAA+GGG 0.421774 tig0003618:-4576 Msa1339990:intergenic
CACGCGCCTTTCCATGTTGT+GGG 0.422801 tig0003618:-3222 Msa1339990:intergenic
ACACCTGGTGCGATCAGATC+AGG 0.425511 tig0003618:-4260 Msa1339990:intergenic
CCTTCTACACCGTTTGATCA+TGG 0.426970 tig0003618:+4527 Msa1339990:CDS
TGAAGCTCGTACTTCACTTC+AGG 0.428417 tig0003618:-3048 Msa1339990:intergenic
TTATCACCGGAGTTAGTTGC+CGG 0.429003 tig0003618:+3921 Msa1339990:CDS
GAAGCCCAATTTCGATTAGT+TGG 0.429053 tig0003618:+5002 Msa1339990:CDS
AATCCCAACTAATCGAAATT+GGG 0.429123 tig0003618:-5006 Msa1339990:intergenic
CTGTCACTTTCTCTTGGTGG+TGG 0.430228 tig0003618:+3582 Msa1339990:CDS
AGCAAGAGCTTCAACGATGC+TGG 0.431465 tig0003618:+3186 Msa1339990:CDS
GGAAGGTTGGAATGGACTAA+TGG 0.434502 tig0003618:+4965 Msa1339990:CDS
GAACTAAATGCTGCGACAAC+CGG 0.437926 tig0003618:-4200 Msa1339990:intergenic
GTCACATAGTACAATCTTCC+CGG 0.438162 tig0003618:-3940 Msa1339990:intergenic
AGAGCTGATCTAACAGCGGC+TGG 0.441933 tig0003618:-4440 Msa1339990:intergenic
CGTTTGCTTGAGAGTCAAAC+GGG 0.443258 tig0003618:+3009 Msa1339990:CDS
GATTGTGTTTCAAGGAACTA+AGG 0.443790 tig0003618:+4160 Msa1339990:CDS
TCGACCCCTCAGAAGTTGAA+TGG 0.445414 tig0003618:+4938 Msa1339990:CDS
CGACCCCTCAGAAGTTGAAT+GGG 0.449973 tig0003618:+4939 Msa1339990:CDS
TACTAACTCCTCGCCATTTG+CGG 0.450315 tig0003618:-4042 Msa1339990:intergenic
AAATTGCAAGATAGTGCAAC+TGG 0.452150 tig0003618:+4500 Msa1339990:CDS
GGCTTCTTCTGGTGTTAACC+TGG 0.454855 tig0003618:-2986 Msa1339990:intergenic
AAGCCCAATTTCGATTAGTT+GGG 0.456897 tig0003618:+5003 Msa1339990:CDS
GTTCTGTCACTTTCTCTTGG+TGG 0.460015 tig0003618:+3579 Msa1339990:CDS
CGTTTGACTCTCAAGCAAAC+GGG 0.460235 tig0003618:-3007 Msa1339990:intergenic
AACAAAACCAAGATTGCTAC+AGG 0.461781 tig0003618:-2784 Msa1339990:intergenic
ATACAAGGCTTCTGCAACAT+CGG 0.462969 tig0003618:+4820 Msa1339990:CDS
CTGAGCAACACAGCCGCAAA+TGG 0.469988 tig0003618:+4029 Msa1339990:CDS
CCGTTTGACTCTCAAGCAAA+CGG 0.475975 tig0003618:-3008 Msa1339990:intergenic
GGTGAAAGCAGCCGGAGGAT+TGG 0.482771 tig0003618:+3998 Msa1339990:CDS
ACACGCGCCTTTCCATGTTG+TGG 0.483426 tig0003618:-3223 Msa1339990:intergenic
ACACCGTTTGATCATGGATC+AGG 0.486913 tig0003618:+4533 Msa1339990:CDS
ACTGTGAAGATTGTGTTTCA+AGG 0.488094 tig0003618:+4152 Msa1339990:CDS
GACTATGTAAGTGCTCTTCA+AGG 0.488528 tig0003618:-2833 Msa1339990:intergenic
ATGGGTTTGGAAGGTTGGAA+TGG 0.491630 tig0003618:+4957 Msa1339990:CDS
TCTGTGAAATGAGAACTTCA+TGG 0.491740 tig0003618:-2755 Msa1339990:intergenic
TTCCCCGCTTCTGTTAGTCT+CGG 0.496414 tig0003618:+3771 Msa1339990:CDS
ACAAGAACTCCTCAGTTCCT+TGG 0.496450 tig0003618:+3075 Msa1339990:CDS
ATCTTCCCGGCAACTAACTC+CGG 0.497503 tig0003618:-3927 Msa1339990:intergenic
CCGTTTGCTTGAGAGTCAAA+CGG 0.498674 tig0003618:+3008 Msa1339990:CDS
CCAAACCCATTCAACTTCTG+AGG 0.500015 tig0003618:-4944 Msa1339990:intergenic
GTATGGTGCTCAAAACTCTC+TGG 0.500925 tig0003618:-2877 Msa1339990:intergenic
CGTCATACACAAATTTCCAT+TGG 0.506115 tig0003618:-3892 Msa1339990:intergenic
AATGGAAATTTGTGTATGAC+GGG 0.508423 tig0003618:+3894 Msa1339990:CDS
GACTACGTTGGCCCCACCCA+TGG 0.510176 tig0003618:-4756 Msa1339990:intergenic
CAAACCCATTCAACTTCTGA+GGG 0.513006 tig0003618:-4943 Msa1339990:intergenic
CGATCCATGGATTCTCCACC+AGG 0.515936 tig0003618:+2968 Msa1339990:CDS
CAATGGAAATTTGTGTATGA+CGG 0.517400 tig0003618:+3893 Msa1339990:CDS
CTTTCACCGACCGCTGTGGC+CGG 0.517956 tig0003618:-4083 Msa1339990:intergenic
TAACCGAATAAGCTTGCGTC+GGG 0.520754 tig0003618:-3426 Msa1339990:intergenic
AGAAGTTGAATGGGTTTGGA+AGG 0.522350 tig0003618:+4948 Msa1339990:CDS
GTGACCGTGGGATGAATGCT+AGG 0.523039 tig0003618:+3958 Msa1339990:CDS
TCGTTTCCTGAGCTTGACTC+AGG 0.524148 tig0003618:-3123 Msa1339990:intergenic
ACTTATGAAAACGCGATCCA+TGG 0.526423 tig0003618:+2955 Msa1339990:CDS
TTAAAGCGGCTCATCCTGAA+TGG 0.529604 tig0003618:+4414 Msa1339990:CDS
TATAAAGTTTGTTGGAAAGG+TGG 0.532291 tig0003618:+3498 Msa1339990:CDS
AAGCTTATTCGGTTACGCAT+CGG 0.534071 tig0003618:+3434 Msa1339990:CDS
CACACCTCATCAACAGCAGC+AGG 0.535276 tig0003618:+3393 Msa1339990:CDS
ATCGGGAACGGCGCGTGGGA+TGG 0.536080 tig0003618:+3452 Msa1339990:CDS
GTTTATAAAGTTTGTTGGAA+AGG 0.536571 tig0003618:+3495 Msa1339990:CDS
ATGTTTCCTGAGTCAAGCTC+AGG 0.536919 tig0003618:+3117 Msa1339990:CDS
GGTTGGAGTTGAGCCTTCAC+CGG 0.537581 tig0003618:+4181 Msa1339990:CDS
TTACCGAGACTAACAGAAGC+GGG 0.537688 tig0003618:-3774 Msa1339990:intergenic
TGAAACACAATCTTCACAGT+TGG 0.538010 tig0003618:-4149 Msa1339990:intergenic
AAACCTGATCTGATCGCACC+AGG 0.543697 tig0003618:+4257 Msa1339990:CDS
ATTCGGTTACGCATCGGGAA+CGG 0.544640 tig0003618:+3440 Msa1339990:CDS
GTGTTTCAAGGAACTAAGGT+TGG 0.547454 tig0003618:+4164 Msa1339990:CDS
CACGAGAATCCTCACAAATG+TGG 0.547746 tig0003618:+4784 Msa1339990:CDS
CCAGGTGTCAACATCTTAGC+GGG 0.548059 tig0003618:+4275 Msa1339990:CDS
GTCTCTCTAATGTTGCTCCA+TGG 0.549761 tig0003618:+3712 Msa1339990:CDS
AGAAAATTCCAGTGTGACGC+GGG 0.552924 tig0003618:+4677 Msa1339990:CDS
GGAGCTGTGGTGAAAGCAGC+CGG 0.552954 tig0003618:+3990 Msa1339990:CDS
TGTCCTGATCCATGATCAAA+CGG 0.553240 tig0003618:-4536 Msa1339990:intergenic
GTCAATAGCGGCCAAAATGT+CGG 0.554249 tig0003618:-3532 Msa1339990:intergenic
TTAACCTGGTGGAGAATCCA+TGG 0.557283 tig0003618:-2972 Msa1339990:intergenic
CTGCGGGTCCCACATTTGTG+AGG 0.560097 tig0003618:-4793 Msa1339990:intergenic
CAGTTACCGTTGATCTACGC+GGG 0.561146 tig0003618:+3852 Msa1339990:CDS
CCCGCTAAGATGTTGACACC+TGG 0.562259 tig0003618:-4275 Msa1339990:intergenic
GCATTCCCCGCGTAGATCAA+CGG 0.562491 tig0003618:-3858 Msa1339990:intergenic
GAAGCCTTGTATGTTCCTGC+GGG 0.563638 tig0003618:-4809 Msa1339990:intergenic
CATCTTAGCGGGATGGTCGA+AGG 0.564840 tig0003618:+4286 Msa1339990:CDS
TAAACCACTCACATGAGGGC+AGG 0.566983 tig0003618:-4381 Msa1339990:intergenic
AGAAGCCTTGTATGTTCCTG+CGG 0.568571 tig0003618:-4810 Msa1339990:intergenic
CTCACAAATGTGGGACCCGC+AGG 0.572719 tig0003618:+4794 Msa1339990:CDS
CTCATCAACGGCTAAGCCAG+TGG 0.574494 tig0003618:-4318 Msa1339990:intergenic
CCTATACCCACAACATGGAA+AGG 0.576152 tig0003618:+3216 Msa1339990:CDS
TCTCGTGTGTTTGACTACGT+TGG 0.577831 tig0003618:-4768 Msa1339990:intergenic
GTCGCAGCATTTAGTTCACG+TGG 0.579732 tig0003618:+4206 Msa1339990:CDS
ACAGCGGTCGGTGAAAGAGA+AGG 0.579848 tig0003618:+4089 Msa1339990:CDS
GATCAGGTTTCAATATCTGC+GGG 0.580203 tig0003618:-4244 Msa1339990:intergenic
TGGATTACTACAGTGGGTGC+TGG 0.582172 tig0003618:+3732 Msa1339990:CDS
TTTAGCTGCTTTGATTAAAG+CGG 0.586580 tig0003618:+4400 Msa1339990:CDS
AAGAAAATTCCAGTGTGACG+CGG 0.586793 tig0003618:+4676 Msa1339990:CDS
AGCAGCCGGAGGATTGGGTA+TGG 0.588157 tig0003618:+4004 Msa1339990:CDS
TTCTTCTGGTGTTAACCTGG+TGG 0.588713 tig0003618:-2983 Msa1339990:intergenic
TCGAGGAGATTTGGACTCTG+TGG 0.588882 tig0003618:-3349 Msa1339990:intergenic
ACTAATGGAAAGAACGTGGT+TGG 0.588961 tig0003618:+4980 Msa1339990:CDS
AATGCTGCGACAACCGGTGA+AGG 0.590713 tig0003618:-4194 Msa1339990:intergenic
ATCTACACGTCTCTCATCAA+CGG 0.590742 tig0003618:-4330 Msa1339990:intergenic
GCACCCACTGTAGTAATCCA+TGG 0.594833 tig0003618:-3729 Msa1339990:intergenic
TTAGAGAGACTATAAGCACT+TGG 0.595586 tig0003618:-3699 Msa1339990:intergenic
CAGAACCATACCCAATCCTC+CGG 0.602588 tig0003618:-4009 Msa1339990:intergenic
ACCAGGTGTCAACATCTTAG+CGG 0.603711 tig0003618:+4274 Msa1339990:CDS
TCCGGTGTGTCGCTCTATCG+AGG 0.603742 tig0003618:+3810 Msa1339990:CDS
TTCATCAATAGGACCTAACA+TGG 0.603749 tig0003618:-3325 Msa1339990:intergenic
ACGAGAATCCTCACAAATGT+GGG 0.603889 tig0003618:+4785 Msa1339990:CDS
CCTCGAGACGACGATGGCCA+CGG 0.603901 tig0003618:+3366 Msa1339990:CDS
GCATTTCAGATTTCGCCATG+TGG 0.604117 tig0003618:-2855 Msa1339990:intergenic
CAACACAGCCGCAAATGGCG+AGG 0.606862 tig0003618:+4034 Msa1339990:CDS
TTCTCTTTCACCGACCGCTG+TGG 0.606868 tig0003618:-4087 Msa1339990:intergenic
GCGGGATGGTCGAAGGCGGT+AGG 0.607748 tig0003618:+4293 Msa1339990:CDS
GGGACCCGCAGGAACATACA+AGG 0.608187 tig0003618:+4805 Msa1339990:CDS
ACTCACATGAGGGCAGGACA+TGG 0.609545 tig0003618:-4375 Msa1339990:intergenic
ACGCATCGGGAACGGCGCGT+GGG 0.612672 tig0003618:+3448 Msa1339990:CDS
TGAGCCTGCTGCTGTTGATG+AGG 0.612783 tig0003618:-3397 Msa1339990:intergenic
GAGTCAAACGGGGATTCTTG+CGG 0.612974 tig0003618:+3020 Msa1339990:CDS
AGATCAGGTTTCAATATCTG+CGG 0.613302 tig0003618:-4245 Msa1339990:intergenic
CCGTGGCCATCGTCGTCTCG+AGG 0.613935 tig0003618:-3366 Msa1339990:intergenic
ATGAATGCTAGGGTGCAGAA+AGG 0.614480 tig0003618:+3969 Msa1339990:CDS
ATGTCCTGCCCTCATGTGAG+TGG 0.615120 tig0003618:+4377 Msa1339990:CDS
CGAAATAGCTTTGTCAATAG+CGG 0.616643 tig0003618:-3544 Msa1339990:intergenic
GCAGCTAAACCACTCACATG+AGG 0.620549 tig0003618:-4386 Msa1339990:intergenic
AATGCTACTAACGCTACCAA+TGG 0.620830 tig0003618:+3876 Msa1339990:CDS
TATCACCGGAGTTAGTTGCC+GGG 0.621391 tig0003618:+3922 Msa1339990:CDS
GTGTCAACATCTTAGCGGGA+TGG 0.627352 tig0003618:+4279 Msa1339990:CDS
GCACCCTAGCATTCATCCCA+CGG 0.631282 tig0003618:-3962 Msa1339990:intergenic
CAGCTAAACCACTCACATGA+GGG 0.633909 tig0003618:-4385 Msa1339990:intergenic
TTGTCAAGACCAAGGAACTG+AGG 0.636087 tig0003618:-3084 Msa1339990:intergenic
CAGGATTAAGGGCTGCAACA+GGG 0.640306 tig0003618:-4565 Msa1339990:intergenic
GTTAAATCATAAACCAAACC+AGG 0.641688 tig0003618:-4584 Msa1339990:intergenic
TCAGGAAACGAGGTTGTCGT+CGG 0.644295 tig0003618:+3135 Msa1339990:CDS
AAGATTGTACTATGTGACCG+TGG 0.644539 tig0003618:+3945 Msa1339990:CDS
TCATCAACGGCTAAGCCAGT+GGG 0.646405 tig0003618:-4317 Msa1339990:intergenic
GCTTCTGTTAGTCTCGGTAA+CGG 0.648843 tig0003618:+3777 Msa1339990:CDS
TATGACGGGAACTTTATCAC+CGG 0.649867 tig0003618:+3908 Msa1339990:CDS
TAGAGAGACTATAAGCACTT+GGG 0.655457 tig0003618:-3698 Msa1339990:intergenic
GCTCCATGGATTACTACAGT+GGG 0.656607 tig0003618:+3726 Msa1339990:CDS
CTGTGTAGTTTAAAGCACAA+AGG 0.663444 tig0003618:-4628 Msa1339990:intergenic
TGACCGTGGGATGAATGCTA+GGG 0.663627 tig0003618:+3959 Msa1339990:CDS
TGAGTCAAGCTCAGGAAACG+AGG 0.667553 tig0003618:+3125 Msa1339990:CDS
AAATCTCCTCGAGACGACGA+TGG 0.667847 tig0003618:+3360 Msa1339990:CDS
GCCTCGATAGAGCGACACAC+CGG 0.679143 tig0003618:-3811 Msa1339990:intergenic
TGATCATGGATCAGGACACG+TGG 0.680005 tig0003618:+4541 Msa1339990:CDS
GGTAACGGACTTAACTACTC+CGG 0.682480 tig0003618:+3792 Msa1339990:CDS
GTAACCGAATAAGCTTGCGT+CGG 0.685164 tig0003618:-3427 Msa1339990:intergenic
GCTGTGGTGAAAGCAGCCGG+AGG 0.686873 tig0003618:+3993 Msa1339990:CDS
TTGATGAGGTGTGAGTGCCG+TGG 0.687104 tig0003618:-3383 Msa1339990:intergenic
TTTGGTTTATGATTTAACAG+CGG 0.687578 tig0003618:+4589 Msa1339990:CDS
TGCTCCATGGATTACTACAG+TGG 0.688244 tig0003618:+3725 Msa1339990:CDS
TTGGACCTATACCCACAACA+TGG 0.690524 tig0003618:+3211 Msa1339990:CDS
CTTAGCGGGATGGTCGAAGG+CGG 0.693872 tig0003618:+4289 Msa1339990:CDS
TCAGTTACCGTTGATCTACG+CGG 0.698039 tig0003618:+3851 Msa1339990:CDS
GAGCACTTACATAGTCCACA+TGG 0.698516 tig0003618:+2840 Msa1339990:CDS
AGATTGTACTATGTGACCGT+GGG 0.698768 tig0003618:+3946 Msa1339990:CDS
ACAAAACCAAGATTGCTACA+GGG 0.699679 tig0003618:-2783 Msa1339990:intergenic
TACCGAGACTAACAGAAGCG+GGG 0.703744 tig0003618:-3773 Msa1339990:intergenic
CATAAGAGCTGATCTAACAG+CGG 0.709966 tig0003618:-4444 Msa1339990:intergenic
AGTTACCGTTGATCTACGCG+GGG 0.711819 tig0003618:+3853 Msa1339990:CDS
GTTACCGAGACTAACAGAAG+CGG 0.712723 tig0003618:-3775 Msa1339990:intergenic
AAACCCATTCAACTTCTGAG+GGG 0.727110 tig0003618:-4942 Msa1339990:intergenic
TAGGGTGCAGAAAGGAGCTG+TGG 0.728123 tig0003618:+3977 Msa1339990:CDS
GTTTGCTTGAGAGTCAAACG+GGG 0.735942 tig0003618:+3010 Msa1339990:CDS
ATGGACTAATGGAAAGAACG+TGG 0.819435 tig0003618:+4976 Msa1339990:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATTGCAACAAAAAGTTGAT+AGG + tig0003618:3273-3292 Msa1339990:CDS 25.0%
!!! TTGCTGTTTATAAAGTTTGT+TGG + tig0003618:3490-3509 Msa1339990:CDS 25.0%
!!! GTTTATAAAGTTTGTTGGAA+AGG + tig0003618:3495-3514 Msa1339990:CDS 25.0%
!!! GTAGATTTTAACATTATCTC+TGG + tig0003618:4347-4366 Msa1339990:CDS 25.0%
!! TTTGGTTTATGATTTAACAG+CGG + tig0003618:4589-4608 Msa1339990:CDS 25.0%
!! AATTGCAACAAAAAGTTGAT+AGG + tig0003618:3273-3292 Msa1339990:CDS 25.0%
!!! TTGCTGTTTATAAAGTTTGT+TGG + tig0003618:3490-3509 Msa1339990:CDS 25.0%
!!! GTTTATAAAGTTTGTTGGAA+AGG + tig0003618:3495-3514 Msa1339990:CDS 25.0%
!!! GTAGATTTTAACATTATCTC+TGG + tig0003618:4347-4366 Msa1339990:CDS 25.0%
!! TTTGGTTTATGATTTAACAG+CGG + tig0003618:4589-4608 Msa1339990:CDS 25.0%
!!! AGCAATCTTGGTTTTGTTTA+TGG + tig0003618:2789-2808 Msa1339990:CDS 30.0%
!!! GCAATCTTGGTTTTGTTTAT+GGG + tig0003618:2790-2809 Msa1339990:CDS 30.0%
ATGATTCATACCACAAAGTA+TGG - tig0003618:2897-2916 Msa1339990:intergenic 30.0%
!! TATAAAGTTTGTTGGAAAGG+TGG + tig0003618:3498-3517 Msa1339990:CDS 30.0%
!!! TTGTTTTAGTTCCGACATTT+TGG + tig0003618:3521-3540 Msa1339990:CDS 30.0%
CAATGGAAATTTGTGTATGA+CGG + tig0003618:3893-3912 Msa1339990:CDS 30.0%
AATGGAAATTTGTGTATGAC+GGG + tig0003618:3894-3913 Msa1339990:CDS 30.0%
!!! CAAAAAGTACTTATTTTCCG+AGG + tig0003618:4121-4140 Msa1339990:CDS 30.0%
! TTTAGCTGCTTTGATTAAAG+CGG + tig0003618:4400-4419 Msa1339990:CDS 30.0%
ATAAACCAAACCAGGATTAA+GGG - tig0003618:4579-4598 Msa1339990:intergenic 30.0%
GTTAAATCATAAACCAAACC+AGG - tig0003618:4587-4606 Msa1339990:intergenic 30.0%
! TCTTAATTACCCATCTTTTG+CGG + tig0003618:4721-4740 Msa1339990:CDS 30.0%
!! TCTTTGAAACTTAACTCTTC+AGG - tig0003618:4875-4894 Msa1339990:intergenic 30.0%
TACTGTAACGTTTACTTCTT+CGG + tig0003618:4913-4932 Msa1339990:CDS 30.0%
AATCCCAACTAATCGAAATT+GGG - tig0003618:5009-5028 Msa1339990:intergenic 30.0%
TAATCCCAACTAATCGAAAT+TGG - tig0003618:5010-5029 Msa1339990:intergenic 30.0%
!!! AGCAATCTTGGTTTTGTTTA+TGG + tig0003618:2789-2808 Msa1339990:CDS 30.0%
!!! GCAATCTTGGTTTTGTTTAT+GGG + tig0003618:2790-2809 Msa1339990:CDS 30.0%
ATGATTCATACCACAAAGTA+TGG - tig0003618:2897-2916 Msa1339990:intergenic 30.0%
!! TATAAAGTTTGTTGGAAAGG+TGG + tig0003618:3498-3517 Msa1339990:CDS 30.0%
!!! TTGTTTTAGTTCCGACATTT+TGG + tig0003618:3521-3540 Msa1339990:CDS 30.0%
CAATGGAAATTTGTGTATGA+CGG + tig0003618:3893-3912 Msa1339990:CDS 30.0%
AATGGAAATTTGTGTATGAC+GGG + tig0003618:3894-3913 Msa1339990:CDS 30.0%
!!! CAAAAAGTACTTATTTTCCG+AGG + tig0003618:4121-4140 Msa1339990:CDS 30.0%
! TTTAGCTGCTTTGATTAAAG+CGG + tig0003618:4400-4419 Msa1339990:CDS 30.0%
ATAAACCAAACCAGGATTAA+GGG - tig0003618:4579-4598 Msa1339990:intergenic 30.0%
GTTAAATCATAAACCAAACC+AGG - tig0003618:4587-4606 Msa1339990:intergenic 30.0%
! TCTTAATTACCCATCTTTTG+CGG + tig0003618:4721-4740 Msa1339990:CDS 30.0%
!! TCTTTGAAACTTAACTCTTC+AGG - tig0003618:4875-4894 Msa1339990:intergenic 30.0%
TACTGTAACGTTTACTTCTT+CGG + tig0003618:4913-4932 Msa1339990:CDS 30.0%
AATCCCAACTAATCGAAATT+GGG - tig0003618:5009-5028 Msa1339990:intergenic 30.0%
TAATCCCAACTAATCGAAAT+TGG - tig0003618:5010-5029 Msa1339990:intergenic 30.0%
ACAAAACCAAGATTGCTACA+GGG - tig0003618:2786-2805 Msa1339990:intergenic 35.0%
AACAAAACCAAGATTGCTAC+AGG - tig0003618:2787-2806 Msa1339990:intergenic 35.0%
!! ACAAAAAGTTGATAGGAGCA+AGG + tig0003618:3280-3299 Msa1339990:CDS 35.0%
TTCATCAATAGGACCTAACA+TGG - tig0003618:3328-3347 Msa1339990:intergenic 35.0%
!! CGAAATAGCTTTGTCAATAG+CGG - tig0003618:3547-3566 Msa1339990:intergenic 35.0%
CGCTATTGACAAAGCTATTT+CGG + tig0003618:3545-3564 Msa1339990:CDS 35.0%
!! AATGTTCTGTCACTTTCTCT+TGG + tig0003618:3576-3595 Msa1339990:CDS 35.0%
!!! TATTGGTGCTTTTTCTGCAA+TGG + tig0003618:3635-3654 Msa1339990:CDS 35.0%
!! ATTCTAGTTTCTTGTTCAGC+TGG + tig0003618:3666-3685 Msa1339990:CDS 35.0%
TAGAGAGACTATAAGCACTT+GGG - tig0003618:3701-3720 Msa1339990:intergenic 35.0%
TTAGAGAGACTATAAGCACT+TGG - tig0003618:3702-3721 Msa1339990:intergenic 35.0%
CGTCATACACAAATTTCCAT+TGG - tig0003618:3895-3914 Msa1339990:intergenic 35.0%
! AGCAGATACTCATCTTTTAC+CGG + tig0003618:4064-4083 Msa1339990:CDS 35.0%
TGAAACACAATCTTCACAGT+TGG - tig0003618:4152-4171 Msa1339990:intergenic 35.0%
ACTGTGAAGATTGTGTTTCA+AGG + tig0003618:4152-4171 Msa1339990:CDS 35.0%
GATTGTGTTTCAAGGAACTA+AGG + tig0003618:4160-4179 Msa1339990:CDS 35.0%
AGATCAGGTTTCAATATCTG+CGG - tig0003618:4248-4267 Msa1339990:intergenic 35.0%
GCTTACACAGCTTACAAAAA+CGG + tig0003618:4473-4492 Msa1339990:CDS 35.0%
AAATTGCAAGATAGTGCAAC+TGG + tig0003618:4500-4519 Msa1339990:CDS 35.0%
CATAAACCAAACCAGGATTA+AGG - tig0003618:4580-4599 Msa1339990:intergenic 35.0%
TTAACAGCGGATGATTATCT+AGG + tig0003618:4602-4621 Msa1339990:CDS 35.0%
! CTGTGTAGTTTAAAGCACAA+AGG - tig0003618:4631-4650 Msa1339990:intergenic 35.0%
CAAAAACTACCGCAAAAGAT+GGG - tig0003618:4733-4752 Msa1339990:intergenic 35.0%
TCAAAAACTACCGCAAAAGA+TGG - tig0003618:4734-4753 Msa1339990:intergenic 35.0%
! TAGTTTTTGATACCATGGGT+GGG + tig0003618:4744-4763 Msa1339990:CDS 35.0%
ACTGTAACGTTTACTTCTTC+GGG + tig0003618:4914-4933 Msa1339990:CDS 35.0%
! AAGCCCAATTTCGATTAGTT+GGG + tig0003618:5003-5022 Msa1339990:CDS 35.0%
ACAAAACCAAGATTGCTACA+GGG - tig0003618:2786-2805 Msa1339990:intergenic 35.0%
AACAAAACCAAGATTGCTAC+AGG - tig0003618:2787-2806 Msa1339990:intergenic 35.0%
!! ACAAAAAGTTGATAGGAGCA+AGG + tig0003618:3280-3299 Msa1339990:CDS 35.0%
TTCATCAATAGGACCTAACA+TGG - tig0003618:3328-3347 Msa1339990:intergenic 35.0%
!! CGAAATAGCTTTGTCAATAG+CGG - tig0003618:3547-3566 Msa1339990:intergenic 35.0%
CGCTATTGACAAAGCTATTT+CGG + tig0003618:3545-3564 Msa1339990:CDS 35.0%
!! AATGTTCTGTCACTTTCTCT+TGG + tig0003618:3576-3595 Msa1339990:CDS 35.0%
!!! TATTGGTGCTTTTTCTGCAA+TGG + tig0003618:3635-3654 Msa1339990:CDS 35.0%
!! ATTCTAGTTTCTTGTTCAGC+TGG + tig0003618:3666-3685 Msa1339990:CDS 35.0%
TAGAGAGACTATAAGCACTT+GGG - tig0003618:3701-3720 Msa1339990:intergenic 35.0%
TTAGAGAGACTATAAGCACT+TGG - tig0003618:3702-3721 Msa1339990:intergenic 35.0%
CGTCATACACAAATTTCCAT+TGG - tig0003618:3895-3914 Msa1339990:intergenic 35.0%
! AGCAGATACTCATCTTTTAC+CGG + tig0003618:4064-4083 Msa1339990:CDS 35.0%
TGAAACACAATCTTCACAGT+TGG - tig0003618:4152-4171 Msa1339990:intergenic 35.0%
ACTGTGAAGATTGTGTTTCA+AGG + tig0003618:4152-4171 Msa1339990:CDS 35.0%
GATTGTGTTTCAAGGAACTA+AGG + tig0003618:4160-4179 Msa1339990:CDS 35.0%
AGATCAGGTTTCAATATCTG+CGG - tig0003618:4248-4267 Msa1339990:intergenic 35.0%
GCTTACACAGCTTACAAAAA+CGG + tig0003618:4473-4492 Msa1339990:CDS 35.0%
AAATTGCAAGATAGTGCAAC+TGG + tig0003618:4500-4519 Msa1339990:CDS 35.0%
CATAAACCAAACCAGGATTA+AGG - tig0003618:4580-4599 Msa1339990:intergenic 35.0%
TTAACAGCGGATGATTATCT+AGG + tig0003618:4602-4621 Msa1339990:CDS 35.0%
! CTGTGTAGTTTAAAGCACAA+AGG - tig0003618:4631-4650 Msa1339990:intergenic 35.0%
CAAAAACTACCGCAAAAGAT+GGG - tig0003618:4733-4752 Msa1339990:intergenic 35.0%
TCAAAAACTACCGCAAAAGA+TGG - tig0003618:4734-4753 Msa1339990:intergenic 35.0%
! TAGTTTTTGATACCATGGGT+GGG + tig0003618:4744-4763 Msa1339990:CDS 35.0%
ACTGTAACGTTTACTTCTTC+GGG + tig0003618:4914-4933 Msa1339990:CDS 35.0%
! AAGCCCAATTTCGATTAGTT+GGG + tig0003618:5003-5022 Msa1339990:CDS 35.0%
ATCTTTCCCTGTAGCAATCT+TGG + tig0003618:2777-2796 Msa1339990:CDS 40.0%
GACTATGTAAGTGCTCTTCA+AGG - tig0003618:2836-2855 Msa1339990:intergenic 40.0%
!! GTTTTGAGCACCATACTTTG+TGG + tig0003618:2884-2903 Msa1339990:CDS 40.0%
ACTTATGAAAACGCGATCCA+TGG + tig0003618:2955-2974 Msa1339990:CDS 40.0%
! CTGCATTTTTGTCAAGACCA+AGG - tig0003618:3095-3114 Msa1339990:intergenic 40.0%
!! GTGTTTTAGACACTGGTGTT+TGG + tig0003618:3157-3176 Msa1339990:CDS 40.0%
! AGGAGCAAGGTTCTTTTCAA+AGG + tig0003618:3293-3312 Msa1339990:CDS 40.0%
! GGAGCAAGGTTCTTTTCAAA+GGG + tig0003618:3294-3313 Msa1339990:CDS 40.0%
GACTCTGTGGTTTCATCAAT+AGG - tig0003618:3339-3358 Msa1339990:intergenic 40.0%
AAGCTTATTCGGTTACGCAT+CGG + tig0003618:3434-3453 Msa1339990:CDS 40.0%
TTCAGAGACAGTGTAGCTAT+TGG + tig0003618:3618-3637 Msa1339990:CDS 40.0%
!! GCTTTTTCTGCAATGGAGAA+AGG + tig0003618:3642-3661 Msa1339990:CDS 40.0%
ATCAACGGTAACTGAGATTC+CGG - tig0003618:3846-3865 Msa1339990:intergenic 40.0%
AATGCTACTAACGCTACCAA+TGG + tig0003618:3876-3895 Msa1339990:CDS 40.0%
! TATGACGGGAACTTTATCAC+CGG + tig0003618:3908-3927 Msa1339990:CDS 40.0%
GTCACATAGTACAATCTTCC+CGG - tig0003618:3943-3962 Msa1339990:intergenic 40.0%
AAGATTGTACTATGTGACCG+TGG + tig0003618:3945-3964 Msa1339990:CDS 40.0%
AGATTGTACTATGTGACCGT+GGG + tig0003618:3946-3965 Msa1339990:CDS 40.0%
GTGTTTCAAGGAACTAAGGT+TGG + tig0003618:4164-4183 Msa1339990:CDS 40.0%
GATCAGGTTTCAATATCTGC+GGG - tig0003618:4247-4266 Msa1339990:intergenic 40.0%
ATCTACACGTCTCTCATCAA+CGG - tig0003618:4333-4352 Msa1339990:intergenic 40.0%
CATAAGAGCTGATCTAACAG+CGG - tig0003618:4447-4466 Msa1339990:intergenic 40.0%
TGTCCTGATCCATGATCAAA+CGG - tig0003618:4539-4558 Msa1339990:intergenic 40.0%
AAGAAAATTCCAGTGTGACG+CGG + tig0003618:4676-4695 Msa1339990:CDS 40.0%
! TGCGGTAGTTTTTGATACCA+TGG + tig0003618:4739-4758 Msa1339990:CDS 40.0%
! GCGGTAGTTTTTGATACCAT+GGG + tig0003618:4740-4759 Msa1339990:CDS 40.0%
! GTAGTTTTTGATACCATGGG+TGG + tig0003618:4743-4762 Msa1339990:CDS 40.0%
! AGTTTTTGATACCATGGGTG+GGG + tig0003618:4745-4764 Msa1339990:CDS 40.0%
ACGAGAATCCTCACAAATGT+GGG + tig0003618:4785-4804 Msa1339990:CDS 40.0%
ATACAAGGCTTCTGCAACAT+CGG + tig0003618:4820-4839 Msa1339990:CDS 40.0%
AAACCCATTCAACTTCTGAG+GGG - tig0003618:4945-4964 Msa1339990:intergenic 40.0%
CAAACCCATTCAACTTCTGA+GGG - tig0003618:4946-4965 Msa1339990:intergenic 40.0%
! AGAAGTTGAATGGGTTTGGA+AGG + tig0003618:4948-4967 Msa1339990:CDS 40.0%
! ATGGACTAATGGAAAGAACG+TGG + tig0003618:4976-4995 Msa1339990:CDS 40.0%
ACTAATGGAAAGAACGTGGT+TGG + tig0003618:4980-4999 Msa1339990:CDS 40.0%
GAAGCCCAATTTCGATTAGT+TGG + tig0003618:5002-5021 Msa1339990:CDS 40.0%
ATCTTTCCCTGTAGCAATCT+TGG + tig0003618:2777-2796 Msa1339990:CDS 40.0%
GACTATGTAAGTGCTCTTCA+AGG - tig0003618:2836-2855 Msa1339990:intergenic 40.0%
!! GTTTTGAGCACCATACTTTG+TGG + tig0003618:2884-2903 Msa1339990:CDS 40.0%
ACTTATGAAAACGCGATCCA+TGG + tig0003618:2955-2974 Msa1339990:CDS 40.0%
! CTGCATTTTTGTCAAGACCA+AGG - tig0003618:3095-3114 Msa1339990:intergenic 40.0%
!! GTGTTTTAGACACTGGTGTT+TGG + tig0003618:3157-3176 Msa1339990:CDS 40.0%
! AGGAGCAAGGTTCTTTTCAA+AGG + tig0003618:3293-3312 Msa1339990:CDS 40.0%
! GGAGCAAGGTTCTTTTCAAA+GGG + tig0003618:3294-3313 Msa1339990:CDS 40.0%
GACTCTGTGGTTTCATCAAT+AGG - tig0003618:3339-3358 Msa1339990:intergenic 40.0%
AAGCTTATTCGGTTACGCAT+CGG + tig0003618:3434-3453 Msa1339990:CDS 40.0%
TTCAGAGACAGTGTAGCTAT+TGG + tig0003618:3618-3637 Msa1339990:CDS 40.0%
!! GCTTTTTCTGCAATGGAGAA+AGG + tig0003618:3642-3661 Msa1339990:CDS 40.0%
ATCAACGGTAACTGAGATTC+CGG - tig0003618:3846-3865 Msa1339990:intergenic 40.0%
AATGCTACTAACGCTACCAA+TGG + tig0003618:3876-3895 Msa1339990:CDS 40.0%
! TATGACGGGAACTTTATCAC+CGG + tig0003618:3908-3927 Msa1339990:CDS 40.0%
GTCACATAGTACAATCTTCC+CGG - tig0003618:3943-3962 Msa1339990:intergenic 40.0%
AAGATTGTACTATGTGACCG+TGG + tig0003618:3945-3964 Msa1339990:CDS 40.0%
AGATTGTACTATGTGACCGT+GGG + tig0003618:3946-3965 Msa1339990:CDS 40.0%
GTGTTTCAAGGAACTAAGGT+TGG + tig0003618:4164-4183 Msa1339990:CDS 40.0%
GATCAGGTTTCAATATCTGC+GGG - tig0003618:4247-4266 Msa1339990:intergenic 40.0%
ATCTACACGTCTCTCATCAA+CGG - tig0003618:4333-4352 Msa1339990:intergenic 40.0%
CATAAGAGCTGATCTAACAG+CGG - tig0003618:4447-4466 Msa1339990:intergenic 40.0%
TGTCCTGATCCATGATCAAA+CGG - tig0003618:4539-4558 Msa1339990:intergenic 40.0%
AAGAAAATTCCAGTGTGACG+CGG + tig0003618:4676-4695 Msa1339990:CDS 40.0%
! TGCGGTAGTTTTTGATACCA+TGG + tig0003618:4739-4758 Msa1339990:CDS 40.0%
! GCGGTAGTTTTTGATACCAT+GGG + tig0003618:4740-4759 Msa1339990:CDS 40.0%
! GTAGTTTTTGATACCATGGG+TGG + tig0003618:4743-4762 Msa1339990:CDS 40.0%
! AGTTTTTGATACCATGGGTG+GGG + tig0003618:4745-4764 Msa1339990:CDS 40.0%
ACGAGAATCCTCACAAATGT+GGG + tig0003618:4785-4804 Msa1339990:CDS 40.0%
ATACAAGGCTTCTGCAACAT+CGG + tig0003618:4820-4839 Msa1339990:CDS 40.0%
AAACCCATTCAACTTCTGAG+GGG - tig0003618:4945-4964 Msa1339990:intergenic 40.0%
CAAACCCATTCAACTTCTGA+GGG - tig0003618:4946-4965 Msa1339990:intergenic 40.0%
! AGAAGTTGAATGGGTTTGGA+AGG + tig0003618:4948-4967 Msa1339990:CDS 40.0%
! ATGGACTAATGGAAAGAACG+TGG + tig0003618:4976-4995 Msa1339990:CDS 40.0%
ACTAATGGAAAGAACGTGGT+TGG + tig0003618:4980-4999 Msa1339990:CDS 40.0%
GAAGCCCAATTTCGATTAGT+TGG + tig0003618:5002-5021 Msa1339990:CDS 40.0%
GAGCACTTACATAGTCCACA+TGG + tig0003618:2840-2859 Msa1339990:CDS 45.0%
GCATTTCAGATTTCGCCATG+TGG - tig0003618:2858-2877 Msa1339990:intergenic 45.0%
GTATGGTGCTCAAAACTCTC+TGG - tig0003618:2880-2899 Msa1339990:intergenic 45.0%
TTAACCTGGTGGAGAATCCA+TGG - tig0003618:2975-2994 Msa1339990:intergenic 45.0%
! TTCTTCTGGTGTTAACCTGG+TGG - tig0003618:2986-3005 Msa1339990:intergenic 45.0%
CGTTTGACTCTCAAGCAAAC+GGG - tig0003618:3010-3029 Msa1339990:intergenic 45.0%
CCGTTTGACTCTCAAGCAAA+CGG - tig0003618:3011-3030 Msa1339990:intergenic 45.0%
CCGTTTGCTTGAGAGTCAAA+CGG + tig0003618:3008-3027 Msa1339990:CDS 45.0%
CGTTTGCTTGAGAGTCAAAC+GGG + tig0003618:3009-3028 Msa1339990:CDS 45.0%
GTTTGCTTGAGAGTCAAACG+GGG + tig0003618:3010-3029 Msa1339990:CDS 45.0%
TGAAGCTCGTACTTCACTTC+AGG - tig0003618:3051-3070 Msa1339990:intergenic 45.0%
ACAAGAACTCCTCAGTTCCT+TGG + tig0003618:3075-3094 Msa1339990:CDS 45.0%
TTGTCAAGACCAAGGAACTG+AGG - tig0003618:3087-3106 Msa1339990:intergenic 45.0%
ATGTTTCCTGAGTCAAGCTC+AGG + tig0003618:3117-3136 Msa1339990:CDS 45.0%
TCGTTGAAGCTCTTGCTTTC+AGG - tig0003618:3183-3202 Msa1339990:intergenic 45.0%
AGCTTCAACGATGCTGGATT+TGG + tig0003618:3192-3211 Msa1339990:CDS 45.0%
TTGGACCTATACCCACAACA+TGG + tig0003618:3211-3230 Msa1339990:CDS 45.0%
CCTTTCCATGTTGTGGGTAT+AGG - tig0003618:3219-3238 Msa1339990:intergenic 45.0%
CCTATACCCACAACATGGAA+AGG + tig0003618:3216-3235 Msa1339990:CDS 45.0%
AAGGGAGTTGAAGCCATGTT+AGG + tig0003618:3312-3331 Msa1339990:CDS 45.0%
TAACCGAATAAGCTTGCGTC+GGG - tig0003618:3429-3448 Msa1339990:intergenic 45.0%
GTAACCGAATAAGCTTGCGT+CGG - tig0003618:3430-3449 Msa1339990:intergenic 45.0%
AGCTTATTCGGTTACGCATC+GGG + tig0003618:3435-3454 Msa1339990:CDS 45.0%
GTCAATAGCGGCCAAAATGT+CGG - tig0003618:3535-3554 Msa1339990:intergenic 45.0%
!! GTTCTGTCACTTTCTCTTGG+TGG + tig0003618:3579-3598 Msa1339990:CDS 45.0%
TCTTGTTCAGCTGGAAATGC+TGG + tig0003618:3675-3694 Msa1339990:CDS 45.0%
GTCTCTCTAATGTTGCTCCA+TGG + tig0003618:3712-3731 Msa1339990:CDS 45.0%
! TGCTCCATGGATTACTACAG+TGG + tig0003618:3725-3744 Msa1339990:CDS 45.0%
! GCTCCATGGATTACTACAGT+GGG + tig0003618:3726-3745 Msa1339990:CDS 45.0%
TTACCGAGACTAACAGAAGC+GGG - tig0003618:3777-3796 Msa1339990:intergenic 45.0%
GTTACCGAGACTAACAGAAG+CGG - tig0003618:3778-3797 Msa1339990:intergenic 45.0%
! GCTTCTGTTAGTCTCGGTAA+CGG + tig0003618:3777-3796 Msa1339990:CDS 45.0%
!! GGTAACGGACTTAACTACTC+CGG + tig0003618:3792-3811 Msa1339990:CDS 45.0%
TCAGTTACCGTTGATCTACG+CGG + tig0003618:3851-3870 Msa1339990:CDS 45.0%
TTATCACCGGAGTTAGTTGC+CGG + tig0003618:3921-3940 Msa1339990:CDS 45.0%
ATGAATGCTAGGGTGCAGAA+AGG + tig0003618:3969-3988 Msa1339990:CDS 45.0%
TACTAACTCCTCGCCATTTG+CGG - tig0003618:4045-4064 Msa1339990:intergenic 45.0%
!!! CTTCACAGTTGGTTTTGCCT+CGG - tig0003618:4141-4160 Msa1339990:intergenic 45.0%
GAACTAAATGCTGCGACAAC+CGG - tig0003618:4203-4222 Msa1339990:intergenic 45.0%
ACCAGGTGTCAACATCTTAG+CGG + tig0003618:4274-4293 Msa1339990:CDS 45.0%
CAGCTAAACCACTCACATGA+GGG - tig0003618:4388-4407 Msa1339990:intergenic 45.0%
TTAAAGCGGCTCATCCTGAA+TGG + tig0003618:4414-4433 Msa1339990:CDS 45.0%
CCATGATCAAACGGTGTAGA+AGG - tig0003618:4530-4549 Msa1339990:intergenic 45.0%
CCTTCTACACCGTTTGATCA+TGG + tig0003618:4527-4546 Msa1339990:CDS 45.0%
ACACCGTTTGATCATGGATC+AGG + tig0003618:4533-4552 Msa1339990:CDS 45.0%
AGAAAATTCCAGTGTGACGC+GGG + tig0003618:4677-4696 Msa1339990:CDS 45.0%
!!! ATTTTTTACCCGCGTCACAC+TGG - tig0003618:4688-4707 Msa1339990:intergenic 45.0%
TCTCGTGTGTTTGACTACGT+TGG - tig0003618:4771-4790 Msa1339990:intergenic 45.0%
CACGAGAATCCTCACAAATG+TGG + tig0003618:4784-4803 Msa1339990:CDS 45.0%
! AGAAGCCTTGTATGTTCCTG+CGG - tig0003618:4813-4832 Msa1339990:intergenic 45.0%
CCAAACCCATTCAACTTCTG+AGG - tig0003618:4947-4966 Msa1339990:intergenic 45.0%
! CCTCAGAAGTTGAATGGGTT+TGG + tig0003618:4944-4963 Msa1339990:CDS 45.0%
! GTTGAATGGGTTTGGAAGGT+TGG + tig0003618:4952-4971 Msa1339990:CDS 45.0%
ATGGGTTTGGAAGGTTGGAA+TGG + tig0003618:4957-4976 Msa1339990:CDS 45.0%
!! GGAAGGTTGGAATGGACTAA+TGG + tig0003618:4965-4984 Msa1339990:CDS 45.0%
GAGCACTTACATAGTCCACA+TGG + tig0003618:2840-2859 Msa1339990:CDS 45.0%
GCATTTCAGATTTCGCCATG+TGG - tig0003618:2858-2877 Msa1339990:intergenic 45.0%
GTATGGTGCTCAAAACTCTC+TGG - tig0003618:2880-2899 Msa1339990:intergenic 45.0%
TTAACCTGGTGGAGAATCCA+TGG - tig0003618:2975-2994 Msa1339990:intergenic 45.0%
! TTCTTCTGGTGTTAACCTGG+TGG - tig0003618:2986-3005 Msa1339990:intergenic 45.0%
CGTTTGACTCTCAAGCAAAC+GGG - tig0003618:3010-3029 Msa1339990:intergenic 45.0%
CCGTTTGACTCTCAAGCAAA+CGG - tig0003618:3011-3030 Msa1339990:intergenic 45.0%
CCGTTTGCTTGAGAGTCAAA+CGG + tig0003618:3008-3027 Msa1339990:CDS 45.0%
CGTTTGCTTGAGAGTCAAAC+GGG + tig0003618:3009-3028 Msa1339990:CDS 45.0%
GTTTGCTTGAGAGTCAAACG+GGG + tig0003618:3010-3029 Msa1339990:CDS 45.0%
TGAAGCTCGTACTTCACTTC+AGG - tig0003618:3051-3070 Msa1339990:intergenic 45.0%
ACAAGAACTCCTCAGTTCCT+TGG + tig0003618:3075-3094 Msa1339990:CDS 45.0%
TTGTCAAGACCAAGGAACTG+AGG - tig0003618:3087-3106 Msa1339990:intergenic 45.0%
ATGTTTCCTGAGTCAAGCTC+AGG + tig0003618:3117-3136 Msa1339990:CDS 45.0%
TCGTTGAAGCTCTTGCTTTC+AGG - tig0003618:3183-3202 Msa1339990:intergenic 45.0%
AGCTTCAACGATGCTGGATT+TGG + tig0003618:3192-3211 Msa1339990:CDS 45.0%
TTGGACCTATACCCACAACA+TGG + tig0003618:3211-3230 Msa1339990:CDS 45.0%
CCTTTCCATGTTGTGGGTAT+AGG - tig0003618:3219-3238 Msa1339990:intergenic 45.0%
CCTATACCCACAACATGGAA+AGG + tig0003618:3216-3235 Msa1339990:CDS 45.0%
AAGGGAGTTGAAGCCATGTT+AGG + tig0003618:3312-3331 Msa1339990:CDS 45.0%
TAACCGAATAAGCTTGCGTC+GGG - tig0003618:3429-3448 Msa1339990:intergenic 45.0%
GTAACCGAATAAGCTTGCGT+CGG - tig0003618:3430-3449 Msa1339990:intergenic 45.0%
AGCTTATTCGGTTACGCATC+GGG + tig0003618:3435-3454 Msa1339990:CDS 45.0%
GTCAATAGCGGCCAAAATGT+CGG - tig0003618:3535-3554 Msa1339990:intergenic 45.0%
!! GTTCTGTCACTTTCTCTTGG+TGG + tig0003618:3579-3598 Msa1339990:CDS 45.0%
TCTTGTTCAGCTGGAAATGC+TGG + tig0003618:3675-3694 Msa1339990:CDS 45.0%
GTCTCTCTAATGTTGCTCCA+TGG + tig0003618:3712-3731 Msa1339990:CDS 45.0%
! TGCTCCATGGATTACTACAG+TGG + tig0003618:3725-3744 Msa1339990:CDS 45.0%
! GCTCCATGGATTACTACAGT+GGG + tig0003618:3726-3745 Msa1339990:CDS 45.0%
TTACCGAGACTAACAGAAGC+GGG - tig0003618:3777-3796 Msa1339990:intergenic 45.0%
GTTACCGAGACTAACAGAAG+CGG - tig0003618:3778-3797 Msa1339990:intergenic 45.0%
! GCTTCTGTTAGTCTCGGTAA+CGG + tig0003618:3777-3796 Msa1339990:CDS 45.0%
!! GGTAACGGACTTAACTACTC+CGG + tig0003618:3792-3811 Msa1339990:CDS 45.0%
TCAGTTACCGTTGATCTACG+CGG + tig0003618:3851-3870 Msa1339990:CDS 45.0%
TTATCACCGGAGTTAGTTGC+CGG + tig0003618:3921-3940 Msa1339990:CDS 45.0%
ATGAATGCTAGGGTGCAGAA+AGG + tig0003618:3969-3988 Msa1339990:CDS 45.0%
TACTAACTCCTCGCCATTTG+CGG - tig0003618:4045-4064 Msa1339990:intergenic 45.0%
!!! CTTCACAGTTGGTTTTGCCT+CGG - tig0003618:4141-4160 Msa1339990:intergenic 45.0%
GAACTAAATGCTGCGACAAC+CGG - tig0003618:4203-4222 Msa1339990:intergenic 45.0%
ACCAGGTGTCAACATCTTAG+CGG + tig0003618:4274-4293 Msa1339990:CDS 45.0%
CAGCTAAACCACTCACATGA+GGG - tig0003618:4388-4407 Msa1339990:intergenic 45.0%
TTAAAGCGGCTCATCCTGAA+TGG + tig0003618:4414-4433 Msa1339990:CDS 45.0%
CCATGATCAAACGGTGTAGA+AGG - tig0003618:4530-4549 Msa1339990:intergenic 45.0%
CCTTCTACACCGTTTGATCA+TGG + tig0003618:4527-4546 Msa1339990:CDS 45.0%
ACACCGTTTGATCATGGATC+AGG + tig0003618:4533-4552 Msa1339990:CDS 45.0%
AGAAAATTCCAGTGTGACGC+GGG + tig0003618:4677-4696 Msa1339990:CDS 45.0%
!!! ATTTTTTACCCGCGTCACAC+TGG - tig0003618:4688-4707 Msa1339990:intergenic 45.0%
TCTCGTGTGTTTGACTACGT+TGG - tig0003618:4771-4790 Msa1339990:intergenic 45.0%
CACGAGAATCCTCACAAATG+TGG + tig0003618:4784-4803 Msa1339990:CDS 45.0%
! AGAAGCCTTGTATGTTCCTG+CGG - tig0003618:4813-4832 Msa1339990:intergenic 45.0%
CCAAACCCATTCAACTTCTG+AGG - tig0003618:4947-4966 Msa1339990:intergenic 45.0%
! CCTCAGAAGTTGAATGGGTT+TGG + tig0003618:4944-4963 Msa1339990:CDS 45.0%
! GTTGAATGGGTTTGGAAGGT+TGG + tig0003618:4952-4971 Msa1339990:CDS 45.0%
ATGGGTTTGGAAGGTTGGAA+TGG + tig0003618:4957-4976 Msa1339990:CDS 45.0%
!! GGAAGGTTGGAATGGACTAA+TGG + tig0003618:4965-4984 Msa1339990:CDS 45.0%
! GGCTTCTTCTGGTGTTAACC+TGG - tig0003618:2989-3008 Msa1339990:intergenic 50.0%
! TCAAGCAAACGGGCTTCTTC+TGG - tig0003618:3000-3019 Msa1339990:intergenic 50.0%
GAGTCAAACGGGGATTCTTG+CGG + tig0003618:3020-3039 Msa1339990:CDS 50.0%
TCGTTTCCTGAGCTTGACTC+AGG - tig0003618:3126-3145 Msa1339990:intergenic 50.0%
TGAGTCAAGCTCAGGAAACG+AGG + tig0003618:3125-3144 Msa1339990:CDS 50.0%
TCAGGAAACGAGGTTGTCGT+CGG + tig0003618:3135-3154 Msa1339990:CDS 50.0%
!! GTCGTCGGTGTTTTAGACAC+TGG + tig0003618:3150-3169 Msa1339990:CDS 50.0%
AGCAAGAGCTTCAACGATGC+TGG + tig0003618:3186-3205 Msa1339990:CDS 50.0%
TCGAGGAGATTTGGACTCTG+TGG - tig0003618:3352-3371 Msa1339990:intergenic 50.0%
ATCGTCGTCTCGAGGAGATT+TGG - tig0003618:3361-3380 Msa1339990:intergenic 50.0%
AAATCTCCTCGAGACGACGA+TGG + tig0003618:3360-3379 Msa1339990:CDS 50.0%
GTTCCCGACGCAAGCTTATT+CGG + tig0003618:3423-3442 Msa1339990:CDS 50.0%
ATTCGGTTACGCATCGGGAA+CGG + tig0003618:3440-3459 Msa1339990:CDS 50.0%
!! CTGTCACTTTCTCTTGGTGG+TGG + tig0003618:3582-3601 Msa1339990:CDS 50.0%
GCACCCACTGTAGTAATCCA+TGG - tig0003618:3732-3751 Msa1339990:intergenic 50.0%
TGGATTACTACAGTGGGTGC+TGG + tig0003618:3732-3751 Msa1339990:CDS 50.0%
! TTCCCCGCTTCTGTTAGTCT+CGG + tig0003618:3771-3790 Msa1339990:CDS 50.0%
TACCGAGACTAACAGAAGCG+GGG - tig0003618:3776-3795 Msa1339990:intergenic 50.0%
CAGTTACCGTTGATCTACGC+GGG + tig0003618:3852-3871 Msa1339990:CDS 50.0%
AGTTACCGTTGATCTACGCG+GGG + tig0003618:3853-3872 Msa1339990:CDS 50.0%
TATCACCGGAGTTAGTTGCC+GGG + tig0003618:3922-3941 Msa1339990:CDS 50.0%
ATCTTCCCGGCAACTAACTC+CGG - tig0003618:3930-3949 Msa1339990:intergenic 50.0%
TGACCGTGGGATGAATGCTA+GGG + tig0003618:3959-3978 Msa1339990:CDS 50.0%
CAGAACCATACCCAATCCTC+CGG - tig0003618:4012-4031 Msa1339990:intergenic 50.0%
! TCATCTTTTACCGGCCACAG+CGG + tig0003618:4073-4092 Msa1339990:CDS 50.0%
! GTCGCAGCATTTAGTTCACG+TGG + tig0003618:4206-4225 Msa1339990:CDS 50.0%
! ATCTGCGGGCTGATCGAATT+AGG - tig0003618:4233-4252 Msa1339990:intergenic 50.0%
AAACCTGATCTGATCGCACC+AGG + tig0003618:4257-4276 Msa1339990:CDS 50.0%
CCAGGTGTCAACATCTTAGC+GGG + tig0003618:4275-4294 Msa1339990:CDS 50.0%
GTGTCAACATCTTAGCGGGA+TGG + tig0003618:4279-4298 Msa1339990:CDS 50.0%
TCATCAACGGCTAAGCCAGT+GGG - tig0003618:4320-4339 Msa1339990:intergenic 50.0%
TAAACCACTCACATGAGGGC+AGG - tig0003618:4384-4403 Msa1339990:intergenic 50.0%
GCAGCTAAACCACTCACATG+AGG - tig0003618:4389-4408 Msa1339990:intergenic 50.0%
TGATCATGGATCAGGACACG+TGG + tig0003618:4541-4560 Msa1339990:CDS 50.0%
CAGGATTAAGGGCTGCAACA+GGG - tig0003618:4568-4587 Msa1339990:intergenic 50.0%
TGCAGCCCTTAATCCTGGTT+TGG + tig0003618:4571-4590 Msa1339990:CDS 50.0%
! GAAGCCTTGTATGTTCCTGC+GGG - tig0003618:4812-4831 Msa1339990:intergenic 50.0%
TCGACCCCTCAGAAGTTGAA+TGG + tig0003618:4938-4957 Msa1339990:CDS 50.0%
CGACCCCTCAGAAGTTGAAT+GGG + tig0003618:4939-4958 Msa1339990:CDS 50.0%
! GGCTTCTTCTGGTGTTAACC+TGG - tig0003618:2989-3008 Msa1339990:intergenic 50.0%
! TCAAGCAAACGGGCTTCTTC+TGG - tig0003618:3000-3019 Msa1339990:intergenic 50.0%
GAGTCAAACGGGGATTCTTG+CGG + tig0003618:3020-3039 Msa1339990:CDS 50.0%
TCGTTTCCTGAGCTTGACTC+AGG - tig0003618:3126-3145 Msa1339990:intergenic 50.0%
TGAGTCAAGCTCAGGAAACG+AGG + tig0003618:3125-3144 Msa1339990:CDS 50.0%
TCAGGAAACGAGGTTGTCGT+CGG + tig0003618:3135-3154 Msa1339990:CDS 50.0%
!! GTCGTCGGTGTTTTAGACAC+TGG + tig0003618:3150-3169 Msa1339990:CDS 50.0%
AGCAAGAGCTTCAACGATGC+TGG + tig0003618:3186-3205 Msa1339990:CDS 50.0%
TCGAGGAGATTTGGACTCTG+TGG - tig0003618:3352-3371 Msa1339990:intergenic 50.0%
ATCGTCGTCTCGAGGAGATT+TGG - tig0003618:3361-3380 Msa1339990:intergenic 50.0%
AAATCTCCTCGAGACGACGA+TGG + tig0003618:3360-3379 Msa1339990:CDS 50.0%
GTTCCCGACGCAAGCTTATT+CGG + tig0003618:3423-3442 Msa1339990:CDS 50.0%
ATTCGGTTACGCATCGGGAA+CGG + tig0003618:3440-3459 Msa1339990:CDS 50.0%
!! CTGTCACTTTCTCTTGGTGG+TGG + tig0003618:3582-3601 Msa1339990:CDS 50.0%
GCACCCACTGTAGTAATCCA+TGG - tig0003618:3732-3751 Msa1339990:intergenic 50.0%
TGGATTACTACAGTGGGTGC+TGG + tig0003618:3732-3751 Msa1339990:CDS 50.0%
! TTCCCCGCTTCTGTTAGTCT+CGG + tig0003618:3771-3790 Msa1339990:CDS 50.0%
TACCGAGACTAACAGAAGCG+GGG - tig0003618:3776-3795 Msa1339990:intergenic 50.0%
CAGTTACCGTTGATCTACGC+GGG + tig0003618:3852-3871 Msa1339990:CDS 50.0%
AGTTACCGTTGATCTACGCG+GGG + tig0003618:3853-3872 Msa1339990:CDS 50.0%
TATCACCGGAGTTAGTTGCC+GGG + tig0003618:3922-3941 Msa1339990:CDS 50.0%
ATCTTCCCGGCAACTAACTC+CGG - tig0003618:3930-3949 Msa1339990:intergenic 50.0%
TGACCGTGGGATGAATGCTA+GGG + tig0003618:3959-3978 Msa1339990:CDS 50.0%
CAGAACCATACCCAATCCTC+CGG - tig0003618:4012-4031 Msa1339990:intergenic 50.0%
! TCATCTTTTACCGGCCACAG+CGG + tig0003618:4073-4092 Msa1339990:CDS 50.0%
! GTCGCAGCATTTAGTTCACG+TGG + tig0003618:4206-4225 Msa1339990:CDS 50.0%
! ATCTGCGGGCTGATCGAATT+AGG - tig0003618:4233-4252 Msa1339990:intergenic 50.0%
AAACCTGATCTGATCGCACC+AGG + tig0003618:4257-4276 Msa1339990:CDS 50.0%
CCAGGTGTCAACATCTTAGC+GGG + tig0003618:4275-4294 Msa1339990:CDS 50.0%
GTGTCAACATCTTAGCGGGA+TGG + tig0003618:4279-4298 Msa1339990:CDS 50.0%
TCATCAACGGCTAAGCCAGT+GGG - tig0003618:4320-4339 Msa1339990:intergenic 50.0%
TAAACCACTCACATGAGGGC+AGG - tig0003618:4384-4403 Msa1339990:intergenic 50.0%
GCAGCTAAACCACTCACATG+AGG - tig0003618:4389-4408 Msa1339990:intergenic 50.0%
TGATCATGGATCAGGACACG+TGG + tig0003618:4541-4560 Msa1339990:CDS 50.0%
CAGGATTAAGGGCTGCAACA+GGG - tig0003618:4568-4587 Msa1339990:intergenic 50.0%
TGCAGCCCTTAATCCTGGTT+TGG + tig0003618:4571-4590 Msa1339990:CDS 50.0%
! GAAGCCTTGTATGTTCCTGC+GGG - tig0003618:4812-4831 Msa1339990:intergenic 50.0%
TCGACCCCTCAGAAGTTGAA+TGG + tig0003618:4938-4957 Msa1339990:CDS 50.0%
CGACCCCTCAGAAGTTGAAT+GGG + tig0003618:4939-4958 Msa1339990:CDS 50.0%
CGATCCATGGATTCTCCACC+AGG + tig0003618:2968-2987 Msa1339990:CDS 55.0%
CACGCGCCTTTCCATGTTGT+GGG - tig0003618:3225-3244 Msa1339990:intergenic 55.0%
ACACGCGCCTTTCCATGTTG+TGG - tig0003618:3226-3245 Msa1339990:intergenic 55.0%
! TGGAAAGGCGCGTGTGAAAC+AGG + tig0003618:3231-3250 Msa1339990:CDS 55.0%
! TTGATGAGGTGTGAGTGCCG+TGG - tig0003618:3386-3405 Msa1339990:intergenic 55.0%
CACACCTCATCAACAGCAGC+AGG + tig0003618:3393-3412 Msa1339990:CDS 55.0%
TGAGCCTGCTGCTGTTGATG+AGG - tig0003618:3400-3419 Msa1339990:intergenic 55.0%
CTATCGAGGCAACGCTCTAC+CGG + tig0003618:3824-3843 Msa1339990:CDS 55.0%
GCATTCCCCGCGTAGATCAA+CGG - tig0003618:3861-3880 Msa1339990:intergenic 55.0%
GTGACCGTGGGATGAATGCT+AGG + tig0003618:3958-3977 Msa1339990:CDS 55.0%
GCACCCTAGCATTCATCCCA+CGG - tig0003618:3965-3984 Msa1339990:intergenic 55.0%
TAGGGTGCAGAAAGGAGCTG+TGG + tig0003618:3977-3996 Msa1339990:CDS 55.0%
GTGAAAGCAGCCGGAGGATT+GGG + tig0003618:3999-4018 Msa1339990:CDS 55.0%
CTGAGCAACACAGCCGCAAA+TGG + tig0003618:4029-4048 Msa1339990:CDS 55.0%
TTCTCTTTCACCGACCGCTG+TGG - tig0003618:4090-4109 Msa1339990:intergenic 55.0%
ACAGCGGTCGGTGAAAGAGA+AGG + tig0003618:4089-4108 Msa1339990:CDS 55.0%
GGTTGGAGTTGAGCCTTCAC+CGG + tig0003618:4181-4200 Msa1339990:CDS 55.0%
AATGCTGCGACAACCGGTGA+AGG - tig0003618:4197-4216 Msa1339990:intergenic 55.0%
ACACCTGGTGCGATCAGATC+AGG - tig0003618:4263-4282 Msa1339990:intergenic 55.0%
CCCGCTAAGATGTTGACACC+TGG - tig0003618:4278-4297 Msa1339990:intergenic 55.0%
CATCTTAGCGGGATGGTCGA+AGG + tig0003618:4286-4305 Msa1339990:CDS 55.0%
CTCATCAACGGCTAAGCCAG+TGG - tig0003618:4321-4340 Msa1339990:intergenic 55.0%
ACTCACATGAGGGCAGGACA+TGG - tig0003618:4378-4397 Msa1339990:intergenic 55.0%
ATGTCCTGCCCTCATGTGAG+TGG + tig0003618:4377-4396 Msa1339990:CDS 55.0%
GAGCTGATCTAACAGCGGCT+GGG - tig0003618:4442-4461 Msa1339990:intergenic 55.0%
AGAGCTGATCTAACAGCGGC+TGG - tig0003618:4443-4462 Msa1339990:intergenic 55.0%
CCAGGATTAAGGGCTGCAAC+AGG - tig0003618:4569-4588 Msa1339990:intergenic 55.0%
CCTGTTGCAGCCCTTAATCC+TGG + tig0003618:4566-4585 Msa1339990:CDS 55.0%
CGATCCATGGATTCTCCACC+AGG + tig0003618:2968-2987 Msa1339990:CDS 55.0%
CACGCGCCTTTCCATGTTGT+GGG - tig0003618:3225-3244 Msa1339990:intergenic 55.0%
ACACGCGCCTTTCCATGTTG+TGG - tig0003618:3226-3245 Msa1339990:intergenic 55.0%
! TGGAAAGGCGCGTGTGAAAC+AGG + tig0003618:3231-3250 Msa1339990:CDS 55.0%
! TTGATGAGGTGTGAGTGCCG+TGG - tig0003618:3386-3405 Msa1339990:intergenic 55.0%
CACACCTCATCAACAGCAGC+AGG + tig0003618:3393-3412 Msa1339990:CDS 55.0%
TGAGCCTGCTGCTGTTGATG+AGG - tig0003618:3400-3419 Msa1339990:intergenic 55.0%
CTATCGAGGCAACGCTCTAC+CGG + tig0003618:3824-3843 Msa1339990:CDS 55.0%
GCATTCCCCGCGTAGATCAA+CGG - tig0003618:3861-3880 Msa1339990:intergenic 55.0%
GTGACCGTGGGATGAATGCT+AGG + tig0003618:3958-3977 Msa1339990:CDS 55.0%
GCACCCTAGCATTCATCCCA+CGG - tig0003618:3965-3984 Msa1339990:intergenic 55.0%
TAGGGTGCAGAAAGGAGCTG+TGG + tig0003618:3977-3996 Msa1339990:CDS 55.0%
GTGAAAGCAGCCGGAGGATT+GGG + tig0003618:3999-4018 Msa1339990:CDS 55.0%
CTGAGCAACACAGCCGCAAA+TGG + tig0003618:4029-4048 Msa1339990:CDS 55.0%
TTCTCTTTCACCGACCGCTG+TGG - tig0003618:4090-4109 Msa1339990:intergenic 55.0%
ACAGCGGTCGGTGAAAGAGA+AGG + tig0003618:4089-4108 Msa1339990:CDS 55.0%
GGTTGGAGTTGAGCCTTCAC+CGG + tig0003618:4181-4200 Msa1339990:CDS 55.0%
AATGCTGCGACAACCGGTGA+AGG - tig0003618:4197-4216 Msa1339990:intergenic 55.0%
ACACCTGGTGCGATCAGATC+AGG - tig0003618:4263-4282 Msa1339990:intergenic 55.0%
CCCGCTAAGATGTTGACACC+TGG - tig0003618:4278-4297 Msa1339990:intergenic 55.0%
CATCTTAGCGGGATGGTCGA+AGG + tig0003618:4286-4305 Msa1339990:CDS 55.0%
CTCATCAACGGCTAAGCCAG+TGG - tig0003618:4321-4340 Msa1339990:intergenic 55.0%
ACTCACATGAGGGCAGGACA+TGG - tig0003618:4378-4397 Msa1339990:intergenic 55.0%
ATGTCCTGCCCTCATGTGAG+TGG + tig0003618:4377-4396 Msa1339990:CDS 55.0%
GAGCTGATCTAACAGCGGCT+GGG - tig0003618:4442-4461 Msa1339990:intergenic 55.0%
AGAGCTGATCTAACAGCGGC+TGG - tig0003618:4443-4462 Msa1339990:intergenic 55.0%
CCAGGATTAAGGGCTGCAAC+AGG - tig0003618:4569-4588 Msa1339990:intergenic 55.0%
CCTGTTGCAGCCCTTAATCC+TGG + tig0003618:4566-4585 Msa1339990:CDS 55.0%
AACAGCAACCCTAGCGCGTG+TGG - tig0003618:3478-3497 Msa1339990:intergenic 60.0%
! TCCGGTGTGTCGCTCTATCG+AGG + tig0003618:3810-3829 Msa1339990:CDS 60.0%
GCCTCGATAGAGCGACACAC+CGG - tig0003618:3814-3833 Msa1339990:intergenic 60.0%
GGAGCTGTGGTGAAAGCAGC+CGG + tig0003618:3990-4009 Msa1339990:CDS 60.0%
GGTGAAAGCAGCCGGAGGAT+TGG + tig0003618:3998-4017 Msa1339990:CDS 60.0%
AGCAGCCGGAGGATTGGGTA+TGG + tig0003618:4004-4023 Msa1339990:CDS 60.0%
CAACACAGCCGCAAATGGCG+AGG + tig0003618:4034-4053 Msa1339990:CDS 60.0%
! CTTTTACCGGCCACAGCGGT+CGG + tig0003618:4077-4096 Msa1339990:CDS 60.0%
CTTAGCGGGATGGTCGAAGG+CGG + tig0003618:4289-4308 Msa1339990:CDS 60.0%
CTGCGGGTCCCACATTTGTG+AGG - tig0003618:4796-4815 Msa1339990:intergenic 60.0%
CTCACAAATGTGGGACCCGC+AGG + tig0003618:4794-4813 Msa1339990:CDS 60.0%
GGGACCCGCAGGAACATACA+AGG + tig0003618:4805-4824 Msa1339990:CDS 60.0%
AACAGCAACCCTAGCGCGTG+TGG - tig0003618:3478-3497 Msa1339990:intergenic 60.0%
! TCCGGTGTGTCGCTCTATCG+AGG + tig0003618:3810-3829 Msa1339990:CDS 60.0%
GCCTCGATAGAGCGACACAC+CGG - tig0003618:3814-3833 Msa1339990:intergenic 60.0%
GGAGCTGTGGTGAAAGCAGC+CGG + tig0003618:3990-4009 Msa1339990:CDS 60.0%
GGTGAAAGCAGCCGGAGGAT+TGG + tig0003618:3998-4017 Msa1339990:CDS 60.0%
AGCAGCCGGAGGATTGGGTA+TGG + tig0003618:4004-4023 Msa1339990:CDS 60.0%
CAACACAGCCGCAAATGGCG+AGG + tig0003618:4034-4053 Msa1339990:CDS 60.0%
! CTTTTACCGGCCACAGCGGT+CGG + tig0003618:4077-4096 Msa1339990:CDS 60.0%
CTTAGCGGGATGGTCGAAGG+CGG + tig0003618:4289-4308 Msa1339990:CDS 60.0%
CTGCGGGTCCCACATTTGTG+AGG - tig0003618:4796-4815 Msa1339990:intergenic 60.0%
CTCACAAATGTGGGACCCGC+AGG + tig0003618:4794-4813 Msa1339990:CDS 60.0%
GGGACCCGCAGGAACATACA+AGG + tig0003618:4805-4824 Msa1339990:CDS 60.0%
CCTCGAGACGACGATGGCCA+CGG + tig0003618:3366-3385 Msa1339990:CDS 65.0%
TGGGATGGCCACACGCGCTA+GGG + tig0003618:3467-3486 Msa1339990:CDS 65.0%
GCTGTGGTGAAAGCAGCCGG+AGG + tig0003618:3993-4012 Msa1339990:CDS 65.0%
CTTTCACCGACCGCTGTGGC+CGG - tig0003618:4086-4105 Msa1339990:intergenic 65.0%
TCGAAGGCGGTAGGTCCCAC+TGG + tig0003618:4302-4321 Msa1339990:CDS 65.0%
ACAGCGGCTGGGCTCCATTC+AGG - tig0003618:4431-4450 Msa1339990:intergenic 65.0%
GACTACGTTGGCCCCACCCA+TGG - tig0003618:4759-4778 Msa1339990:intergenic 65.0%
CCTCGAGACGACGATGGCCA+CGG + tig0003618:3366-3385 Msa1339990:CDS 65.0%
TGGGATGGCCACACGCGCTA+GGG + tig0003618:3467-3486 Msa1339990:CDS 65.0%
GCTGTGGTGAAAGCAGCCGG+AGG + tig0003618:3993-4012 Msa1339990:CDS 65.0%
CTTTCACCGACCGCTGTGGC+CGG - tig0003618:4086-4105 Msa1339990:intergenic 65.0%
TCGAAGGCGGTAGGTCCCAC+TGG + tig0003618:4302-4321 Msa1339990:CDS 65.0%
ACAGCGGCTGGGCTCCATTC+AGG - tig0003618:4431-4450 Msa1339990:intergenic 65.0%
GACTACGTTGGCCCCACCCA+TGG - tig0003618:4759-4778 Msa1339990:intergenic 65.0%
CCGTGGCCATCGTCGTCTCG+AGG - tig0003618:3369-3388 Msa1339990:intergenic 70.0%
TACGCATCGGGAACGGCGCG+TGG + tig0003618:3447-3466 Msa1339990:CDS 70.0%
ACGCATCGGGAACGGCGCGT+GGG + tig0003618:3448-3467 Msa1339990:CDS 70.0%
ATCGGGAACGGCGCGTGGGA+TGG + tig0003618:3452-3471 Msa1339990:CDS 70.0%
GTGGGATGGCCACACGCGCT+AGG + tig0003618:3466-3485 Msa1339990:CDS 70.0%
GCGGGATGGTCGAAGGCGGT+AGG + tig0003618:4293-4312 Msa1339990:CDS 70.0%
CCGTGGCCATCGTCGTCTCG+AGG - tig0003618:3369-3388 Msa1339990:intergenic 70.0%
TACGCATCGGGAACGGCGCG+TGG + tig0003618:3447-3466 Msa1339990:CDS 70.0%
ACGCATCGGGAACGGCGCGT+GGG + tig0003618:3448-3467 Msa1339990:CDS 70.0%
ATCGGGAACGGCGCGTGGGA+TGG + tig0003618:3452-3471 Msa1339990:CDS 70.0%
GTGGGATGGCCACACGCGCT+AGG + tig0003618:3466-3485 Msa1339990:CDS 70.0%
GCGGGATGGTCGAAGGCGGT+AGG + tig0003618:4293-4312 Msa1339990:CDS 70.0%
Chromosome Type Strat End Strand Name
tig0003618 gene 2757 5030 2757 ID=Msa1339990;Name=Msa1339990
tig0003618 mRNA 2757 5030 2757 ID=Msa1339990-mRNA-1;Parent=Msa1339990;Name=Msa1339990-mRNA-1;_AED=0.00;_eAED=0.00;_QI=0|-1|0|1|-1|1|1|0|757
tig0003618 exon 2757 5030 2757 ID=Msa1339990-mRNA-1:exon:2356;Parent=Msa1339990-mRNA-1
tig0003618 CDS 2757 5030 2757 ID=Msa1339990-mRNA-1:cds;Parent=Msa1339990-mRNA-1
Gene Sequence

>Msa1339990

ATGAAGTTCTCATTTCACAGATCTTTCCCTGTAGCAATCTTGGTTTTGTTTATGGGTCTATGTGATGCATCTTCTTCCTTGAAGAGCACTTACATAGTCCACATGGCGAAATCTGAAATGCCAGAGAGTTTTGAGCACCATACTTTGTGGTATGAATCATCTTTACAATCTGTATCTGATTCAGCTGAAATGATGTATACTTATGAAAACGCGATCCATGGATTCTCCACCAGGTTAACACCAGAAGAAGCCCGTTTGCTTGAGAGTCAAACGGGGATTCTTGCGGTGTTACCTGAAGTGAAGTACGAGCTTCACACAACAAGAACTCCTCAGTTCCTTGGTCTTGACAAAAATGCAGAAATGTTTCCTGAGTCAAGCTCAGGAAACGAGGTTGTCGTCGGTGTTTTAGACACTGGTGTTTGGCCTGAAAGCAAGAGCTTCAACGATGCTGGATTTGGACCTATACCCACAACATGGAAAGGCGCGTGTGAAACAGGTACAAATTTCACAGCTTCAAATTGCAACAAAAAGTTGATAGGAGCAAGGTTCTTTTCAAAGGGAGTTGAAGCCATGTTAGGTCCTATTGATGAAACCACAGAGTCCAAATCTCCTCGAGACGACGATGGCCACGGCACTCACACCTCATCAACAGCAGCAGGCTCAGTCGTTCCCGACGCAAGCTTATTCGGTTACGCATCGGGAACGGCGCGTGGGATGGCCACACGCGCTAGGGTTGCTGTTTATAAAGTTTGTTGGAAAGGTGGTTGTTTTAGTTCCGACATTTTGGCCGCTATTGACAAAGCTATTTCGGACAACGTTAATGTTCTGTCACTTTCTCTTGGTGGTGGAATGTCTGATTATTTCAGAGACAGTGTAGCTATTGGTGCTTTTTCTGCAATGGAGAAAGGAATTCTAGTTTCTTGTTCAGCTGGAAATGCTGGCCCAAGTGCTTATAGTCTCTCTAATGTTGCTCCATGGATTACTACAGTGGGTGCTGGTACTCTTGATCGTGATTTCCCCGCTTCTGTTAGTCTCGGTAACGGACTTAACTACTCCGGTGTGTCGCTCTATCGAGGCAACGCTCTACCGGAATCTCAGTTACCGTTGATCTACGCGGGGAATGCTACTAACGCTACCAATGGAAATTTGTGTATGACGGGAACTTTATCACCGGAGTTAGTTGCCGGGAAGATTGTACTATGTGACCGTGGGATGAATGCTAGGGTGCAGAAAGGAGCTGTGGTGAAAGCAGCCGGAGGATTGGGTATGGTTCTGAGCAACACAGCCGCAAATGGCGAGGAGTTAGTAGCAGATACTCATCTTTTACCGGCCACAGCGGTCGGTGAAAGAGAAGGCAATGCAATCAAAAAGTACTTATTTTCCGAGGCAAAACCAACTGTGAAGATTGTGTTTCAAGGAACTAAGGTTGGAGTTGAGCCTTCACCGGTTGTCGCAGCATTTAGTTCACGTGGACCTAATTCGATCAGCCCGCAGATATTGAAACCTGATCTGATCGCACCAGGTGTCAACATCTTAGCGGGATGGTCGAAGGCGGTAGGTCCCACTGGCTTAGCCGTTGATGAGAGACGTGTAGATTTTAACATTATCTCTGGTACATCCATGTCCTGCCCTCATGTGAGTGGTTTAGCTGCTTTGATTAAAGCGGCTCATCCTGAATGGAGCCCAGCCGCTGTTAGATCAGCTCTTATGACAACTGCTTACACAGCTTACAAAAACGGTAACAAATTGCAAGATAGTGCAACTGGAAAACCTTCTACACCGTTTGATCATGGATCAGGACACGTGGACCCTGTTGCAGCCCTTAATCCTGGTTTGGTTTATGATTTAACAGCGGATGATTATCTAGGTTTCCTTTGTGCTTTAAACTACACAGCAGCACAGATCACATCTTTAGCAAGAAGAAAATTCCAGTGTGACGCGGGTAAAAAATACAGTGTGTCTGATCTTAATTACCCATCTTTTGCGGTAGTTTTTGATACCATGGGTGGGGCCAACGTAGTCAAACACACGAGAATCCTCACAAATGTGGGACCCGCAGGAACATACAAGGCTTCTGCAACATCGGATTCAAAGAATGTGAAAATAACAGTTGAGCCTGAAGAGTTAAGTTTCAAAGAAAATGAGAAGAAAAGTTTTACTGTAACGTTTACTTCTTCGGGTTCGACCCCTCAGAAGTTGAATGGGTTTGGAAGGTTGGAATGGACTAATGGAAAGAACGTGGTTGGAAGCCCAATTTCGATTAGTTGGGATTAA
Protein sequence

>Msa1339990

MKFSFHRSFPVAILVLFMGLCDASSSLKSTYIVHMAKSEMPESFEHHTLWYESSLQSVSDSAEMMYTYENAIHGFSTRLTPEEARLLESQTGILAVLPEVKYELHTTRTPQFLGLDKNAEMFPESSSGNEVVVGVLDTGVWPESKSFNDAGFGPIPTTWKGACETGTNFTASNCNKKLIGARFFSKGVEAMLGPIDETTESKSPRDDDGHGTHTSSTAAGSVVPDASLFGYASGTARGMATRARVAVYKVCWKGGCFSSDILAAIDKAISDNVNVLSLSLGGGMSDYFRDSVAIGAFSAMEKGILVSCSAGNAGPSAYSLSNVAPWITTVGAGTLDRDFPASVSLGNGLNYSGVSLYRGNALPESQLPLIYAGNATNATNGNLCMTGTLSPELVAGKIVLCDRGMNARVQKGAVVKAAGGLGMVLSNTAANGEELVADTHLLPATAVGEREGNAIKKYLFSEAKPTVKIVFQGTKVGVEPSPVVAAFSSRGPNSISPQILKPDLIAPGVNILAGWSKAVGPTGLAVDERRVDFNIISGTSMSCPHVSGLAALIKAAHPEWSPAAVRSALMTTAYTAYKNGNKLQDSATGKPSTPFDHGSGHVDPVAALNPGLVYDLTADDYLGFLCALNYTAAQITSLARRKFQCDAGKKYSVSDLNYPSFAVVFDTMGGANVVKHTRILTNVGPAGTYKASATSDSKNVKITVEPEELSFKENEKKSFTVTFTSSGSTPQKLNGFGRLEWTNGKNVVGSPISISWD*