AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1368390

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1368390 MtrunA17_Chr4g0035391 79.745 627 112 5 1 623 1 616 0.0 1026
Msa1368390 MtrunA17_Chr3g0144911 98.807 419 5 0 1 419 1 419 0.0 867
Msa1368390 MtrunA17_Chr1g0155521 67.516 628 190 9 1 622 1 620 0.0 855
Msa1368390 MtrunA17_Chr3g0141821 58.814 607 208 7 18 623 7 572 0.0 666
Msa1368390 MtrunA17_Chr3g0144891 54.090 599 225 13 28 623 18 569 0.0 557
Msa1368390 MtrunA17_Chr8g0372651 51.820 577 221 8 39 609 17 542 0.0 555
Msa1368390 MtrunA17_Chr5g0404711 61.153 399 122 4 41 439 10 375 2.74e-176 509
Msa1368390 MtrunA17_Chr5g0404711 40.196 102 57 2 522 623 378 475 4.71e-14 75.1
Msa1368390 MtrunA17_Chr3g0080051 43.770 626 325 13 13 622 4 618 4.47e-163 480
Msa1368390 MtrunA17_Chr7g0236461 43.269 624 300 13 14 623 4 587 2.03e-162 478
Msa1368390 MtrunA17_Chr4g0035361 53.586 502 188 11 110 609 1 459 5.82e-161 469
Msa1368390 MtrunA17_Chr4g0035381 59.432 387 83 5 17 395 16 336 1.44e-144 424
Msa1368390 MtrunA17_Chr8g0369291 41.157 605 326 11 31 622 15 602 3.52e-138 416
Msa1368390 MtrunA17_Chr3g0144901 97.449 196 5 0 428 623 1 196 1.93e-136 396
Msa1368390 MtrunA17_Chr5g0399151 51.948 308 143 2 44 351 54 356 4.62e-110 338
Msa1368390 MtrunA17_Chr3g0102691 31.301 246 142 7 88 317 1 235 9.69e-20 91.3
Msa1368390 MtrunA17_Chr4g0076441 25.982 331 204 10 85 393 1 312 4.06e-19 89.0
Msa1368390 MtrunA17_Chr3g0131581 31.163 215 129 6 107 320 66 262 3.39e-18 85.1
Msa1368390 MtrunA17_Chr2g0290661 28.870 239 146 7 93 317 13 241 5.35e-18 85.5
Msa1368390 MtrunA17_Chr8g0385681 31.944 216 128 7 106 320 48 245 1.92e-16 79.7
Msa1368390 MtrunA17_Chr4g0014901 30.180 222 129 9 110 320 271 477 2.27e-16 82.8
Msa1368390 MtrunA17_Chr8g0385291 29.437 231 138 7 110 330 181 396 3.41e-16 81.6
Msa1368390 MtrunA17_Chr4g0004981 27.313 227 140 8 110 326 125 336 2.54e-15 79.0
Msa1368390 MtrunA17_Chr1g0155071 30.986 213 121 9 113 320 48 239 1.82e-14 74.3
Msa1368390 MtrunA17_Chr1g0161441 30.047 213 130 8 111 320 32 228 3.20e-13 70.1
Msa1368390 MtrunA17_Chr3g0131071 28.829 222 133 8 110 320 249 456 1.55e-12 70.5
Msa1368390 MtrunA17_Chr4g0014911 26.549 226 143 6 110 324 139 352 3.44e-11 65.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1368390 AT2G21520.1 74.720 625 145 5 1 617 1 620 0.0 951
Msa1368390 AT2G21520.2 74.086 629 146 6 1 617 1 624 0.0 942
Msa1368390 AT2G21520.3 74.086 629 146 6 1 617 1 624 0.0 942
Msa1368390 AT4G39170.1 73.576 632 140 8 1 623 1 614 0.0 934
Msa1368390 AT4G39170.2 73.418 632 139 9 1 623 1 612 0.0 928
Msa1368390 AT1G19650.1 58.889 630 230 10 1 623 1 608 0.0 701
Msa1368390 AT1G75370.1 58.202 634 232 12 1 623 1 612 0.0 679
Msa1368390 AT1G75370.2 57.771 637 233 12 1 623 1 615 0.0 676
Msa1368390 AT1G19650.2 58.935 526 193 7 105 623 27 536 0.0 597
Msa1368390 AT2G21540.6 51.269 591 220 10 23 609 11 537 0.0 584
Msa1368390 AT2G21540.2 51.269 591 220 10 23 609 11 537 0.0 584
Msa1368390 AT2G21540.1 51.269 591 220 10 23 609 11 537 0.0 584
Msa1368390 AT2G21540.4 51.269 591 220 10 23 609 11 537 0.0 584
Msa1368390 AT2G21540.3 50.931 591 216 10 23 609 11 531 0.0 582
Msa1368390 AT2G21540.5 50.931 591 216 10 23 609 11 531 0.0 582
Msa1368390 AT4G36490.1 53.380 577 214 11 35 609 8 531 0.0 573
Msa1368390 AT4G34580.2 50.251 597 229 10 24 609 3 542 0.0 563
Msa1368390 AT4G34580.1 50.251 597 229 10 24 609 3 542 0.0 563
Msa1368390 AT4G39180.1 50.085 591 232 13 23 609 11 542 0.0 555
Msa1368390 AT1G19650.3 65.783 415 134 5 1 415 1 407 0.0 547
Msa1368390 AT4G39180.3 73.214 336 86 3 23 357 11 343 0.0 535
Msa1368390 AT4G39180.2 73.214 336 86 3 23 357 11 343 0.0 535
Msa1368390 AT2G16380.2 46.891 595 253 10 26 615 5 541 1.96e-179 520
Msa1368390 AT2G16380.1 46.891 595 253 10 26 615 5 541 1.96e-179 520
Msa1368390 AT2G18180.2 74.684 316 72 4 37 351 14 322 1.21e-173 505
Msa1368390 AT2G18180.2 55.714 70 31 0 541 610 466 535 2.98e-16 82.8
Msa1368390 AT2G18180.1 74.684 316 72 4 37 351 14 322 1.26e-173 505
Msa1368390 AT2G18180.1 55.714 70 31 0 541 610 466 535 3.03e-16 82.8
Msa1368390 AT3G24840.1 46.000 600 266 13 29 623 22 568 1.28e-167 491
Msa1368390 AT3G24840.6 46.000 600 266 13 29 623 22 568 1.28e-167 491
Msa1368390 AT3G24840.4 46.000 600 266 13 29 623 22 568 1.28e-167 491
Msa1368390 AT3G24840.2 46.000 600 266 13 29 623 22 568 1.28e-167 491
Msa1368390 AT3G24840.7 46.000 600 267 13 29 623 22 569 1.87e-167 490
Msa1368390 AT3G24840.3 46.000 600 267 13 29 623 22 569 1.87e-167 490
Msa1368390 AT3G24840.5 46.000 600 267 13 29 623 22 569 1.87e-167 490
Msa1368390 AT1G55690.2 42.992 635 322 10 14 622 5 625 1.38e-158 469
Msa1368390 AT1G55690.4 42.992 635 322 10 14 622 5 625 1.38e-158 469
Msa1368390 AT1G55690.1 42.992 635 322 10 14 622 5 625 1.38e-158 469
Msa1368390 AT1G55690.5 42.992 635 322 10 14 622 5 625 1.38e-158 469
Msa1368390 AT1G55690.3 43.062 627 319 9 14 616 5 617 3.02e-157 466
Msa1368390 AT2G18180.3 80.083 241 48 0 111 351 11 251 2.10e-150 443
Msa1368390 AT2G18180.3 55.714 70 31 0 541 610 395 464 1.74e-16 83.2
Msa1368390 AT2G18180.4 80.417 240 47 0 112 351 12 251 2.17e-150 443
Msa1368390 AT2G18180.4 55.714 70 31 0 541 610 395 464 1.75e-16 83.2
Msa1368390 AT2G16380.3 46.138 492 205 8 128 615 1 436 1.16e-142 422
Msa1368390 AT2G18180.5 81.250 224 42 0 128 351 1 224 1.39e-141 419
Msa1368390 AT2G18180.5 55.714 70 31 0 541 610 368 437 1.42e-16 83.2
Msa1368390 AT5G56160.2 55.780 346 149 3 16 359 1 344 3.69e-135 404
Msa1368390 AT5G56160.1 55.780 346 149 3 16 359 1 344 2.18e-134 405
Msa1368390 AT5G56160.3 55.780 346 149 3 16 359 1 344 2.18e-134 405
Msa1368390 AT5G47510.2 50.775 258 127 0 86 343 27 284 5.49e-100 308
Msa1368390 AT5G47510.1 50.775 258 127 0 86 343 26 283 1.45e-99 308
Msa1368390 AT5G47510.4 50.775 258 127 0 86 343 27 284 1.53e-99 308
Msa1368390 AT5G47510.3 52.655 226 107 0 118 343 2 227 2.44e-91 285
Msa1368390 AT5G47730.4 27.984 243 156 6 86 317 7 241 1.63e-19 90.9
Msa1368390 AT5G47730.1 27.984 243 156 6 86 317 7 241 1.63e-19 90.9
Msa1368390 AT1G55840.1 29.098 244 145 6 97 328 19 246 4.39e-18 86.3
Msa1368390 AT1G55840.2 30.047 213 133 4 111 317 12 214 2.46e-17 83.6
Msa1368390 AT1G01630.1 31.604 212 126 7 110 320 52 245 9.49e-17 80.9
Msa1368390 AT1G72160.1 24.336 226 148 8 110 324 166 379 1.42e-15 80.1
Msa1368390 AT5G47730.2 27.604 192 131 3 128 317 1 186 4.29e-14 73.6
Msa1368390 AT5G47730.3 27.604 192 131 3 128 317 1 186 4.29e-14 73.6
Msa1368390 AT4G09160.3 24.638 276 179 8 65 324 267 529 3.20e-12 70.1
Msa1368390 AT4G09160.2 26.106 226 144 6 110 324 316 529 3.80e-12 69.7
Msa1368390 AT4G09160.1 26.106 226 144 6 110 324 341 554 4.34e-12 69.7
Msa1368390 AT3G51670.1 25.000 236 149 9 110 337 84 299 1.49e-11 67.4

Find 193 sgRNAs with CRISPR-Local

Find 362 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTTCCAATCAAATTCAAATT+AGG 0.085421 tig0018646:+62799 Msa1368390:five_prime_UTR
CATATGACCTTCAATATTTC+AGG 0.179559 tig0018646:-64720 None:intergenic
GAATAGCTCTTCATTGCTTT+TGG 0.251350 tig0018646:-65103 None:intergenic
CTCGCAACTTGGCTTCTTCC+TGG 0.254873 tig0018646:-66739 None:intergenic
CAGAGGTCTCACACCTTAAA+AGG 0.255250 tig0018646:+65531 Msa1368390:CDS
TTCCAATCAAATTCAAATTA+GGG 0.256826 tig0018646:+62800 Msa1368390:five_prime_UTR
TTGTAGGAGGGAGTTGAATT+AGG 0.272628 tig0018646:-62844 None:intergenic
ACCCGAGCTTTAACTCCTTC+TGG 0.274076 tig0018646:-66069 None:intergenic
GGAAACATTACTTAGGTTCT+TGG 0.276758 tig0018646:+64482 Msa1368390:intron
TTCCCTGGCGGCCTTGCCCT+TGG 0.278290 tig0018646:-62446 None:intergenic
AACCCTAATTTGAATTTGAT+TGG 0.310023 tig0018646:-62802 None:intergenic
TGTGGGTCCCACTTTAGTTT+TGG 0.314789 tig0018646:-62587 None:intergenic
AGCTAGCAAAGATGCTATTC+TGG 0.321042 tig0018646:-67049 None:intergenic
TTTACTACTAAGACCTCGTT+TGG 0.327966 tig0018646:-62391 None:intergenic
ACTCTCACCGAACAGGTAAA+AGG 0.336501 tig0018646:+65028 Msa1368390:intron
AGAGTTAATTGCTACTAAAA+AGG 0.344700 tig0018646:+66413 Msa1368390:CDS
ATGGCCCTTTATCAGATCTA+AGG 0.345070 tig0018646:-64689 None:intergenic
CTGACTTTGTAAAATTCTTA+AGG 0.347694 tig0018646:-64053 None:intergenic
GATACATCTACTGCCGAATC+AGG 0.348018 tig0018646:+65055 Msa1368390:CDS
AAGGAGTTAAAGCTCGGGTT+TGG 0.349644 tig0018646:+66073 Msa1368390:CDS
CACCCAAGGGCAAGGCCGCC+AGG 0.350122 tig0018646:+62443 Msa1368390:five_prime_UTR
CAGGTACCTCCGAGAAATTC+CGG 0.352903 tig0018646:-64642 None:intergenic
GGAAGTTATGCTAACATGTC+TGG 0.353390 tig0018646:+65441 Msa1368390:CDS
CACGAACAGGGGTCAGTCTA+AGG 0.356073 tig0018646:-65129 None:intergenic
CCAAGTCTTTCAATATAAAC+AGG 0.360352 tig0018646:-63765 None:intergenic
CTCTTCCATTCAGCATCAAC+AGG 0.363635 tig0018646:-65495 None:intergenic
TATTCATGCGTGTTTACTTC+CGG 0.364504 tig0018646:+67421 Msa1368390:three_prime_UTR
GTCTGTGCTTGGCTTGTTGA+AGG 0.374114 tig0018646:-66243 None:intergenic
CACTTAATGTAGTGAGTTGC+CGG 0.379771 tig0018646:+64623 Msa1368390:intron
TCCCTGGCGGCCTTGCCCTT+GGG 0.385722 tig0018646:-62445 None:intergenic
TGGTAATCATCAAAAGCTTC+AGG 0.385856 tig0018646:-63253 None:intergenic
ACTGATGCAGGTTACAACTA+TGG 0.387260 tig0018646:+63806 Msa1368390:CDS
TGTTGAATGCTGCGGTCTGC+CGG 0.390645 tig0018646:+66373 Msa1368390:CDS
TAGTATCATACTATCATCAT+AGG 0.390835 tig0018646:-62532 None:intergenic
CTACAATGGAGAAGGGAGTT+TGG 0.395043 tig0018646:+63441 Msa1368390:CDS
GGATGCCTTAGATCTGATAA+AGG 0.399200 tig0018646:+64684 Msa1368390:CDS
CGGCATTTATGATAAACATT+TGG 0.399702 tig0018646:-64309 None:intergenic
TTGCCTCATTCTTCATTCCC+TGG 0.401093 tig0018646:-62461 None:intergenic
CCTGTTTATATTGAAAGACT+TGG 0.404931 tig0018646:+63765 Msa1368390:CDS
GATGAAAGGAGAACCAGAAT+TGG 0.406535 tig0018646:+63049 Msa1368390:CDS
AGACTTACTTCCTCACGAAC+AGG 0.409545 tig0018646:-65142 None:intergenic
TTCAGCTTCTGACCCTGATT+CGG 0.410951 tig0018646:-65068 None:intergenic
GGTCTGCCGGGTGGATGCTT+TGG 0.413892 tig0018646:+66386 Msa1368390:CDS
CCCTCCTTGCTGAAAAGGTT+AGG 0.416929 tig0018646:+66282 Msa1368390:CDS
TCTTTCCCTCCTTGCTGAAA+AGG 0.421998 tig0018646:+66277 Msa1368390:CDS
CAACTCCCTCCTACAATGTC+TGG 0.427157 tig0018646:+62851 Msa1368390:exon
ATGATTACCATATGATGTTA+AGG 0.431353 tig0018646:+63266 Msa1368390:CDS
CTGGCGGCCTTGCCCTTGGG+TGG 0.435894 tig0018646:-62442 None:intergenic
TTAACTTACGTGGATCTTTG+AGG 0.437733 tig0018646:-64389 None:intergenic
TTCTTGCTTATCTTGTCCAC+TGG 0.437905 tig0018646:+67158 Msa1368390:three_prime_UTR
TGATATTGCAGGAAGTTTGT+TGG 0.441337 tig0018646:-66160 None:intergenic
AGCTCGGGTTTGGGTAGCCC+TGG 0.441503 tig0018646:+66083 Msa1368390:CDS
AGTGAGTTGCCGGAATTTCT+CGG 0.443277 tig0018646:+64633 Msa1368390:intron
GGTTGAAAAGCTTTAGTTGT+TGG 0.444239 tig0018646:+67129 Msa1368390:three_prime_UTR
AAGAGCACCTTAACATCATA+TGG 0.445237 tig0018646:-63273 None:intergenic
AGGAGTTAAAGCTCGGGTTT+GGG 0.448011 tig0018646:+66074 Msa1368390:CDS
GTAACCTGCATCAGTTTGTT+CGG 0.450895 tig0018646:-63798 None:intergenic
TTGAGAATTCAGAAGATGAA+AGG 0.452181 tig0018646:+63035 Msa1368390:CDS
CTCCACAACAGTCTAAATCC+AGG 0.459305 tig0018646:-64334 None:intergenic
TTTATCATAAATGCCGGCCC+TGG 0.461240 tig0018646:+64316 Msa1368390:CDS
GTTAGGTGAGCTTGAAGAGA+AGG 0.464549 tig0018646:+66299 Msa1368390:CDS
TCATCATTAGATGATATTGC+AGG 0.467092 tig0018646:-66171 None:intergenic
TGTTAGCTCTGTTTCTATTG+AGG 0.470702 tig0018646:+63159 Msa1368390:CDS
TCTCAATGGCGAACCACGGC+GGG 0.475604 tig0018646:+64827 Msa1368390:CDS
CTAAAGACAGAGAAAGAGAA+AGG 0.476100 tig0018646:-62668 None:intergenic
TTTACCCTTTCATCAGCTGC+AGG 0.478475 tig0018646:+62624 Msa1368390:five_prime_UTR
TCTAAGAGAATGCTTAAACT+TGG 0.481804 tig0018646:-63104 None:intergenic
CACTGCCTGCAGCTGATGAA+AGG 0.483068 tig0018646:-62629 None:intergenic
ACACTATACCAAAACTAAAG+TGG 0.485836 tig0018646:+62579 Msa1368390:five_prime_UTR
AAGGTCTAGCGAAACGATCA+AGG 0.486798 tig0018646:-62877 None:intergenic
ATGTTTGTTGTCTCGAGAGT+TGG 0.489587 tig0018646:-66210 None:intergenic
AACAATTCCGCCTTCTCGTA+AGG 0.494601 tig0018646:-66354 None:intergenic
TTTGTAGATTTCTGAAAGCA+AGG 0.495319 tig0018646:+63376 Msa1368390:intron
ATGCCAACTTACTCGCAACT+TGG 0.496679 tig0018646:-66750 None:intergenic
ACCACAATCTTAGATGTTCA+AGG 0.499904 tig0018646:+63927 Msa1368390:CDS
ATTTGTCAGGCTAAGATAGC+AGG 0.500992 tig0018646:+65414 Msa1368390:intron
AGCAAATAACATCAGGAAGA+AGG 0.501851 tig0018646:-66109 None:intergenic
ACATCAGGAAGAAGGCAGCC+AGG 0.503548 tig0018646:-66101 None:intergenic
TCAACAGGTTTGTCTACCAT+TGG 0.504730 tig0018646:-65480 None:intergenic
TTCTCGTAAGGCATTTCAGA+TGG 0.509154 tig0018646:-66342 None:intergenic
AAACGTCCCACCCAAGGGCA+AGG 0.510069 tig0018646:+62435 Msa1368390:five_prime_UTR
TAAAAGAGGAGGAGCAGTTG+TGG 0.511561 tig0018646:-62605 None:intergenic
CTCCAGAAGGAGTTAAAGCT+CGG 0.512546 tig0018646:+66067 Msa1368390:CDS
GCAACCGCTGAATGAGTTCA+CGG 0.514132 tig0018646:-64077 None:intergenic
GGAAAAGAGCAAATAACATC+AGG 0.514810 tig0018646:-66116 None:intergenic
TATTACCCACATGGCCATCA+TGG 0.515918 tig0018646:+63723 Msa1368390:CDS
TGGCGGCCTTGCCCTTGGGT+GGG 0.520606 tig0018646:-62441 None:intergenic
TAAAGACAGAGAAAGAGAAA+GGG 0.520963 tig0018646:-62667 None:intergenic
AATGCGTACAAAAGTAGTAA+AGG 0.522586 tig0018646:+67467 Msa1368390:three_prime_UTR
AAAGAAAAGAAAAGAAGGAA+TGG 0.525650 tig0018646:-62708 None:intergenic
TACTTGAAGTAATTGATGCC+AGG 0.527444 tig0018646:+64525 Msa1368390:CDS
CAGGAAGTTTGTTGGTCATG+CGG 0.529886 tig0018646:-66152 None:intergenic
ACAAACCTGTTGATGCTGAA+TGG 0.529895 tig0018646:+65490 Msa1368390:CDS
AGTGGTAGGAGAAAGAGTGA+TGG 0.530434 tig0018646:+63133 Msa1368390:CDS
TCAAGGGGTCCAGACATTGT+AGG 0.532137 tig0018646:-62860 None:intergenic
CTTCCTTGTCTACACCATGA+TGG 0.535434 tig0018646:-63737 None:intergenic
AAGTACAACTGTGATCGTGC+TGG 0.536156 tig0018646:-66926 None:intergenic
AGCTGATGAAAGGGTAAAAG+AGG 0.537928 tig0018646:-62619 None:intergenic
GTTGAATGCTGCGGTCTGCC+GGG 0.538487 tig0018646:+66374 Msa1368390:CDS
CACTATACCAAAACTAAAGT+GGG 0.539911 tig0018646:+62580 Msa1368390:five_prime_UTR
TGAGGATGTTAGAGATGTTG+AGG 0.541292 tig0018646:+63177 Msa1368390:CDS
ACCCAAGGGCAAGGCCGCCA+GGG 0.541314 tig0018646:+62444 Msa1368390:five_prime_UTR
ACTGCCTGCAGCTGATGAAA+GGG 0.541563 tig0018646:-62628 None:intergenic
CTCTCTACGAAGCGTTAATG+AGG 0.542826 tig0018646:+66687 Msa1368390:CDS
TCATGCGGCAAGCAACTTGA+CGG 0.543728 tig0018646:-66137 None:intergenic
TCCCTCGTCTGCACAAGAGC+AGG 0.544804 tig0018646:-64661 None:intergenic
CTGACATGCTACAATGGAGA+AGG 0.546074 tig0018646:+63433 Msa1368390:CDS
TGGTGCTGACACCATTATGC+AGG 0.547549 tig0018646:+63461 Msa1368390:CDS
CTCTTAGAAAGAAGAGTGGT+AGG 0.547857 tig0018646:+63119 Msa1368390:CDS
GATGCCTTAGATCTGATAAA+GGG 0.549117 tig0018646:+64685 Msa1368390:CDS
ATCTGAAATGCCTTACGAGA+AGG 0.553009 tig0018646:+66344 Msa1368390:CDS
CAGGCTAAGATAGCAGGAAA+GGG 0.556007 tig0018646:+65420 Msa1368390:intron
TGATCCGAACAAACTGATGC+AGG 0.556119 tig0018646:+63794 Msa1368390:CDS
GAAGTTATGCTAACATGTCT+GGG 0.556151 tig0018646:+65442 Msa1368390:CDS
GCCCTGGATTTAGACTGTTG+TGG 0.562110 tig0018646:+64332 Msa1368390:CDS
TCAGGCTAAGATAGCAGGAA+AGG 0.562842 tig0018646:+65419 Msa1368390:intron
TACCTGCTCTTGTGCAGACG+AGG 0.562861 tig0018646:+64659 Msa1368390:CDS
AGTATCATACTATCATCATA+GGG 0.563052 tig0018646:-62531 None:intergenic
AGGATCAAGAAAAGACTTGA+CGG 0.565906 tig0018646:-64359 None:intergenic
CATCAGGAAGAAGGCAGCCA+GGG 0.566468 tig0018646:-66100 None:intergenic
CAAATGTTTATCATAAATGC+CGG 0.567049 tig0018646:+64310 Msa1368390:CDS
AGTACAACTGTGATCGTGCT+GGG 0.568944 tig0018646:-66925 None:intergenic
CAGTGGATAGAGTTACAACA+TGG 0.568948 tig0018646:-66969 None:intergenic
GTAAAGGTTCTCAACAGTGA+AGG 0.571005 tig0018646:+64861 Msa1368390:CDS
AAAAGAGGAGGAGCAGTTGT+GGG 0.572833 tig0018646:-62604 None:intergenic
GCTTGCTTACATAGACCGCC+AGG 0.573707 tig0018646:+66721 Msa1368390:CDS
TCCAGAAGGAGTTAAAGCTC+GGG 0.574655 tig0018646:+66068 Msa1368390:CDS
GGTTCTCAACAGTGAAGGGA+AGG 0.575465 tig0018646:+64866 Msa1368390:CDS
GACTTACTTCCTCACGAACA+GGG 0.576560 tig0018646:-65141 None:intergenic
TAAAGGTTCTCAACAGTGAA+GGG 0.579543 tig0018646:+64862 Msa1368390:CDS
CAACAGTCTAAATCCAGGGC+CGG 0.582978 tig0018646:-64329 None:intergenic
CTGTTGATGCTGAATGGAAG+AGG 0.584003 tig0018646:+65496 Msa1368390:CDS
AGGTCTAGCGAAACGATCAA+GGG 0.584638 tig0018646:-62876 None:intergenic
CTTGCACTATTGCTGCAAAG+AGG 0.584915 tig0018646:+63889 Msa1368390:CDS
TTGAGAAAACGTCCCACCCA+AGG 0.585130 tig0018646:+62429 Msa1368390:five_prime_UTR
AACATACAAAACACTCCAGA+AGG 0.585254 tig0018646:+66054 Msa1368390:CDS
CAACCGCTGAATGAGTTCAC+GGG 0.585454 tig0018646:-64076 None:intergenic
TTAGATCTGATAAAGGGCCA+TGG 0.586575 tig0018646:+64691 Msa1368390:CDS
ACTCATTCAGCGGTTGCAGA+AGG 0.587086 tig0018646:+64083 Msa1368390:CDS
AGAGTTACCATTGGGTATCG+TGG 0.589722 tig0018646:-64906 None:intergenic
AGGGGTCCAGACATTGTAGG+AGG 0.593227 tig0018646:-62857 None:intergenic
ATACATCTACTGCCGAATCA+GGG 0.600440 tig0018646:+65056 Msa1368390:CDS
GCGGGCAAGACAAGTAGTAA+AGG 0.600575 tig0018646:+64845 Msa1368390:CDS
ACTACTTGTCTTGCCCGCCG+TGG 0.608753 tig0018646:-64840 None:intergenic
AACTCTCGAGACAACAAACA+TGG 0.609861 tig0018646:+66212 Msa1368390:CDS
CAGCGGTTGCAGAAGGTCGA+CGG 0.610486 tig0018646:+64090 Msa1368390:CDS
TTTGCAGCAATAGTGCAAGC+AGG 0.612016 tig0018646:-63885 None:intergenic
AAAGACAGAGAAAGAGAAAG+GGG 0.618292 tig0018646:-62666 None:intergenic
TGAGAAAACGTCCCACCCAA+GGG 0.619079 tig0018646:+62430 Msa1368390:five_prime_UTR
TCCTTGAACATCTAAGATTG+TGG 0.621262 tig0018646:-63928 None:intergenic
CCGCCAGGGAATGAAGAATG+AGG 0.622334 tig0018646:+62458 Msa1368390:five_prime_UTR
TGCTCTTGTGCAGACGAGGG+AGG 0.624988 tig0018646:+64663 Msa1368390:CDS
TAGACTGACCCCTGTTCGTG+AGG 0.627244 tig0018646:+65132 Msa1368390:CDS
AGAAAGATGCTCCACAGAGG+AGG 0.627660 tig0018646:+66894 Msa1368390:three_prime_UTR
ATGGTGTAGACAAGGAAGGA+AGG 0.628721 tig0018646:+63742 Msa1368390:CDS
AATCTTAGATGTTCAAGGAG+TGG 0.629525 tig0018646:+63932 Msa1368390:CDS
TGCGAAGCCACGATACCCAA+TGG 0.631200 tig0018646:+64899 Msa1368390:CDS
TGTGGGCTGACATGCTACAA+TGG 0.633693 tig0018646:+63427 Msa1368390:CDS
GGCGGAATTGTTGAATGCTG+CGG 0.635995 tig0018646:+66365 Msa1368390:CDS
GGGAGAAACATCCTCCTCTG+TGG 0.636984 tig0018646:-66905 None:intergenic
TGATGAAAGGGTAAAAGAGG+AGG 0.640882 tig0018646:-62616 None:intergenic
TGGCCATCATGGTGTAGACA+AGG 0.641499 tig0018646:+63734 Msa1368390:CDS
TGACATGCTACAATGGAGAA+GGG 0.642619 tig0018646:+63434 Msa1368390:CDS
CATTCTCTTAGAAAGAAGAG+TGG 0.644440 tig0018646:+63115 Msa1368390:CDS
TCCACAACAGTCTAAATCCA+GGG 0.645024 tig0018646:-64333 None:intergenic
ATTTCTCAAACTCTTGCACA+TGG 0.647962 tig0018646:-63845 None:intergenic
CATCATGGTGTAGACAAGGA+AGG 0.648295 tig0018646:+63738 Msa1368390:CDS
ACCTGCTCTTGTGCAGACGA+GGG 0.649120 tig0018646:+64660 Msa1368390:CDS
GTATGATGAATATGTTCCAA+TGG 0.652365 tig0018646:+65464 Msa1368390:CDS
AACAAGCCAAGCACAGACAG+AGG 0.652528 tig0018646:+66248 Msa1368390:CDS
CTGCTTCCAAAGCATCCACC+CGG 0.654601 tig0018646:-66392 None:intergenic
TGAAATGCCTTACGAGAAGG+CGG 0.658641 tig0018646:+66347 Msa1368390:CDS
GGGGTCCAGACATTGTAGGA+GGG 0.661895 tig0018646:-62856 None:intergenic
GTACTATGAGTAAAACTAAG+CGG 0.665294 tig0018646:+67001 Msa1368390:three_prime_UTR
TCTACACCATGATGGCCATG+TGG 0.666431 tig0018646:-63729 None:intergenic
GCAACTTGGCTTCTTCCTGG+CGG 0.667045 tig0018646:-66736 None:intergenic
TTCTCAATGGCGAACCACGG+CGG 0.670535 tig0018646:+64826 Msa1368390:CDS
TGGTTCTCAATGGCGAACCA+CGG 0.670544 tig0018646:+64823 Msa1368390:CDS
GAGTTACAACATGGGTACAA+CGG 0.675378 tig0018646:-66960 None:intergenic
GAATGCTGCGGTCTGCCGGG+TGG 0.679946 tig0018646:+66377 Msa1368390:CDS
ACTTACTTCCTCACGAACAG+GGG 0.681063 tig0018646:-65140 None:intergenic
GAACGCGTGCTTCAACACAC+CGG 0.686752 tig0018646:-67440 None:intergenic
CAGCCCGTGAACTCATTCAG+CGG 0.691924 tig0018646:+64073 Msa1368390:CDS
CCTCATTCTTCATTCCCTGG+CGG 0.692548 tig0018646:-62458 None:intergenic
GGTCTAGCGAAACGATCAAG+GGG 0.694371 tig0018646:-62875 None:intergenic
CTACACCATGATGGCCATGT+GGG 0.701290 tig0018646:-63728 None:intergenic
AGAGGCAAACATCTCTACAG+AGG 0.704526 tig0018646:+65514 Msa1368390:CDS
GTTGTGAAGTATTACCCACA+TGG 0.705174 tig0018646:+63714 Msa1368390:CDS
AAAATAAGCTAATCCAAACG+AGG 0.735067 tig0018646:+62378 None:intergenic
AGTGGATAGAGTTACAACAT+GGG 0.742824 tig0018646:-66968 None:intergenic
GATAGAAAGATGCTCCACAG+AGG 0.748082 tig0018646:+66891 Msa1368390:three_prime_UTR
GAGTTGCCGGAATTTCTCGG+AGG 0.755589 tig0018646:+64636 Msa1368390:CDS
CGACGGTGACAATTACCCCG+AGG 0.764728 tig0018646:+64107 Msa1368390:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TAATTGTGTTTAATTATTAT+TGG + tig0018646:63343-63362 Msa1368390:intron 10.0%
!! ATAAAAAAGAAAAGAAAAGA+AGG - tig0018646:62716-62735 None:intergenic 15.0%
!!! TAAAATGCATATAGAATTTT+GGG + tig0018646:63484-63503 Msa1368390:intron 15.0%
!!! TTTTTTATGAATCAATTTTC+AGG + tig0018646:64029-64048 Msa1368390:intron 15.0%
!!! TTTTTATGAATCAATTTTCA+GGG + tig0018646:64030-64049 Msa1368390:intron 15.0%
!! AATAAGAAGATTCATTAAAA+GGG - tig0018646:65586-65605 None:intergenic 15.0%
!! AAATAAGAAGATTCATTAAA+AGG - tig0018646:65587-65606 None:intergenic 15.0%
!!! TATTTTGTTAATTATGACAT+AGG + tig0018646:65660-65679 Msa1368390:intron 15.0%
!! TTCCAATCAAATTCAAATTA+GGG + tig0018646:62800-62819 Msa1368390:five_prime_UTR 20.0%
!!! TTGAATTTGTTCAATTTTTC+AGG + tig0018646:62962-62981 Msa1368390:intron 20.0%
!!! ACTTAAAGCTTTCTTTTTTA+AGG - tig0018646:63077-63096 None:intergenic 20.0%
!!! GTAAAATGCATATAGAATTT+TGG + tig0018646:63483-63502 Msa1368390:intron 20.0%
!! AAAAAACAAAACATTAGGTA+AGG - tig0018646:63660-63679 None:intergenic 20.0%
!! TCAATAGAAAAGAAAAATCA+TGG - tig0018646:64563-64582 None:intergenic 20.0%
!! TAAATAGCAATTTGTAGAAT+AGG - tig0018646:65171-65190 None:intergenic 20.0%
!! ATAATAATAACTAATCTGAC+AGG + tig0018646:65201-65220 Msa1368390:intron 20.0%
!! TTTGCATGTAAATTTCAAAA+AGG + tig0018646:65850-65869 Msa1368390:intron 20.0%
! AGTATCATACTATCATCATA+GGG - tig0018646:62534-62553 None:intergenic 25.0%
! TAGTATCATACTATCATCAT+AGG - tig0018646:62535-62554 None:intergenic 25.0%
! AAAGAAAAGAAAAGAAGGAA+TGG - tig0018646:62711-62730 None:intergenic 25.0%
! CTTCCAATCAAATTCAAATT+AGG + tig0018646:62799-62818 Msa1368390:five_prime_UTR 25.0%
! AACCCTAATTTGAATTTGAT+TGG - tig0018646:62805-62824 None:intergenic 25.0%
!!! TTCAATTTTTCAGGTTTTGA+GGG + tig0018646:62971-62990 Msa1368390:intron 25.0%
! ATGATTACCATATGATGTTA+AGG + tig0018646:63266-63285 Msa1368390:CDS 25.0%
! TTTCTGATGGTTAAATAACA+TGG + tig0018646:63530-63549 Msa1368390:intron 25.0%
!! GAACAAGATATAGACTTTTA+GGG + tig0018646:63552-63571 Msa1368390:intron 25.0%
!! TATGTTTAGATGGATGATTT+TGG + tig0018646:63575-63594 Msa1368390:intron 25.0%
! GATGCAAAAAACAAAACATT+AGG - tig0018646:63665-63684 None:intergenic 25.0%
!!! AATGTTTTGTTTTTTGCATC+AGG + tig0018646:63665-63684 Msa1368390:intron 25.0%
! AATTGAATGATTTCAAACCT+TGG - tig0018646:63999-64018 None:intergenic 25.0%
! CTGACTTTGTAAAATTCTTA+AGG - tig0018646:64056-64075 None:intergenic 25.0%
! CAAATGTTTATCATAAATGC+CGG + tig0018646:64310-64329 Msa1368390:CDS 25.0%
!! AATTTAAAACAGCTAGAAGA+TGG - tig0018646:64418-64437 None:intergenic 25.0%
!! AATATTTCAGGATTTTTCCA+TGG - tig0018646:64711-64730 None:intergenic 25.0%
! GAAAAATCCTGAAATATTGA+AGG + tig0018646:64713-64732 Msa1368390:CDS 25.0%
!! TAGAACTATTTTGTCCAATT+GGG - tig0018646:65631-65650 None:intergenic 25.0%
! ATTTACATGCAAATGAAATC+CGG - tig0018646:65843-65862 None:intergenic 25.0%
!!! CTTTTTTACAAGTCAAAGAA+TGG - tig0018646:65908-65927 None:intergenic 25.0%
! AGAGTTAATTGCTACTAAAA+AGG + tig0018646:66413-66432 Msa1368390:CDS 25.0%
! TTAATTGCTACTAAAAAGGT+AGG + tig0018646:66417-66436 Msa1368390:intron 25.0%
! TTGAAGATAGTAAGAATAAG+AGG - tig0018646:66531-66550 None:intergenic 25.0%
! TCCAGAAAAATCAAATGTTA+GGG - tig0018646:66656-66675 None:intergenic 25.0%
! ATCCAGAAAAATCAAATGTT+AGG - tig0018646:66657-66676 None:intergenic 25.0%
!! TAGCAAAGCTAACATTTTAA+AGG + tig0018646:66784-66803 Msa1368390:intron 25.0%
!!! TTTTTGTTTGTCTTTGTATC+TGG + tig0018646:67094-67113 Msa1368390:three_prime_UTR 25.0%
! TTCTTATTGGTCAAAAACAA+TGG + tig0018646:67251-67270 Msa1368390:intron 25.0%
!!! AACCACTTTTTGACAATTTT+TGG - tig0018646:67336-67355 None:intergenic 25.0%
ACACTATACCAAAACTAAAG+TGG + tig0018646:62579-62598 Msa1368390:five_prime_UTR 30.0%
CACTATACCAAAACTAAAGT+GGG + tig0018646:62580-62599 Msa1368390:five_prime_UTR 30.0%
TAAAGACAGAGAAAGAGAAA+GGG - tig0018646:62670-62689 None:intergenic 30.0%
!!! TTTTGTTCTTCTTGTTGTTG+CGG - tig0018646:62774-62793 None:intergenic 30.0%
!! AAATTGAAGAGGTACTTACA+AGG - tig0018646:62899-62918 None:intergenic 30.0%
!!! GTTCAATTTTTCAGGTTTTG+AGG + tig0018646:62970-62989 Msa1368390:intron 30.0%
!!! TCAATTTTTCAGGTTTTGAG+GGG + tig0018646:62972-62991 Msa1368390:intron 30.0%
TTGAGAATTCAGAAGATGAA+AGG + tig0018646:63035-63054 Msa1368390:CDS 30.0%
!!! CTTTTTTAAGGATCCAATTC+TGG - tig0018646:63065-63084 None:intergenic 30.0%
TCTAAGAGAATGCTTAAACT+TGG - tig0018646:63107-63126 None:intergenic 30.0%
! TTTGTAGATTTCTGAAAGCA+AGG + tig0018646:63376-63395 Msa1368390:intron 30.0%
TTGAAAAAGCAAAGCATATG+TGG + tig0018646:63409-63428 Msa1368390:CDS 30.0%
TGAAAAAGCAAAGCATATGT+GGG + tig0018646:63410-63429 Msa1368390:CDS 30.0%
! TATGCATTTTACCTGCATAA+TGG - tig0018646:63475-63494 None:intergenic 30.0%
! GGAACAAGATATAGACTTTT+AGG + tig0018646:63551-63570 Msa1368390:intron 30.0%
!!! ACTTTTAGGGTATGTTTAGA+TGG + tig0018646:63565-63584 Msa1368390:intron 30.0%
! TTTAGATGGATGATTTTGGA+GGG + tig0018646:63579-63598 Msa1368390:intron 30.0%
TAAGGCAATCAATTACTTCA+GGG - tig0018646:63642-63661 None:intergenic 30.0%
CCAAGTCTTTCAATATAAAC+AGG - tig0018646:63768-63787 None:intergenic 30.0%
CCTGTTTATATTGAAAGACT+TGG + tig0018646:63765-63784 Msa1368390:CDS 30.0%
! AGTGTGATATAACTAGGTTT+TGG + tig0018646:64221-64240 Msa1368390:intron 30.0%
AAAAACAGTAATCACACTGT+GGG - tig0018646:64266-64285 None:intergenic 30.0%
AAAAAACAGTAATCACACTG+TGG - tig0018646:64267-64286 None:intergenic 30.0%
CGGCATTTATGATAAACATT+TGG - tig0018646:64312-64331 None:intergenic 30.0%
CATATGACCTTCAATATTTC+AGG - tig0018646:64723-64742 None:intergenic 30.0%
!! GTGTTTACACTTTTTGTAGA+TGG + tig0018646:64803-64822 Msa1368390:intron 30.0%
! TTTTTGTAGATGGTTCTCAA+TGG + tig0018646:64813-64832 Msa1368390:intron 30.0%
! AAATATGTGAAGCACCAAAT+TGG - tig0018646:64966-64985 None:intergenic 30.0%
ACATAGTGAAAAAAAGACCT+TGG + tig0018646:65258-65277 Msa1368390:intron 30.0%
CACAATATCTCCAAATATTG+TGG - tig0018646:65301-65320 None:intergenic 30.0%
CAATATTTGGAGATATTGTG+AGG + tig0018646:65301-65320 Msa1368390:intron 30.0%
AAAGAGAAAATTCTCTGAAC+AGG - tig0018646:65359-65378 None:intergenic 30.0%
! TTCACATTCTGTTATTTGTC+AGG + tig0018646:65401-65420 Msa1368390:intron 30.0%
GTATGATGAATATGTTCCAA+TGG + tig0018646:65464-65483 Msa1368390:CDS 30.0%
TCACTAAAATTTCACCCAAT+TGG + tig0018646:65614-65633 Msa1368390:intron 30.0%
! GTAGAACTATTTTGTCCAAT+TGG - tig0018646:65632-65651 None:intergenic 30.0%
ATGCAAAATTGAGGTTGTAA+TGG - tig0018646:65724-65743 None:intergenic 30.0%
! ATATTGTGCTATAGCCTTTT+TGG + tig0018646:65768-65787 Msa1368390:intron 30.0%
! TATTGTGCTATAGCCTTTTT+GGG + tig0018646:65769-65788 Msa1368390:intron 30.0%
TGGATCATTCATATAGTATC+CGG + tig0018646:65821-65840 Msa1368390:intron 30.0%
! TTTCAAAAAGGCTTTTGATG+AGG + tig0018646:65862-65881 Msa1368390:intron 30.0%
! TTCAAAAAGGCTTTTGATGA+GGG + tig0018646:65863-65882 Msa1368390:intron 30.0%
! AAAAAAGAGTTCGAGCTTTT+AGG + tig0018646:65921-65940 Msa1368390:intron 30.0%
TTCTCCAGCAAAAGTTTAAT+CGG + tig0018646:66001-66020 Msa1368390:intron 30.0%
! AAATCCGATTAAACTTTTGC+TGG - tig0018646:66008-66027 None:intergenic 30.0%
TTTAATCGGATTTCCAATAC+AGG + tig0018646:66015-66034 Msa1368390:intron 30.0%
TCATCATTAGATGATATTGC+AGG - tig0018646:66174-66193 None:intergenic 30.0%
! ATCAGAAAAAGAAGTTTTGC+TGG + tig0018646:66854-66873 Msa1368390:intron 30.0%
GTACTATGAGTAAAACTAAG+CGG + tig0018646:67001-67020 Msa1368390:three_prime_UTR 30.0%
ATTACTCATACAAAAACCAG+TGG - tig0018646:67177-67196 None:intergenic 30.0%
TCAACAAAGTTGTCATCAAA+TGG - tig0018646:67213-67232 None:intergenic 30.0%
AATAAGAAGTGAGGAAAACA+AGG - tig0018646:67239-67258 None:intergenic 30.0%
! TTGTTTTCCTCACTTCTTAT+TGG + tig0018646:67238-67257 Msa1368390:intron 30.0%
! TTTTTGACCAATAAGAAGTG+AGG - tig0018646:67248-67267 None:intergenic 30.0%
AAAACAATGGAGAGAGAAAA+AGG + tig0018646:67264-67283 Msa1368390:intron 30.0%
GTCCAAAAATTGTCAAAAAG+TGG + tig0018646:67331-67350 Msa1368390:intron 30.0%
TTTACTACTAAGACCTCGTT+TGG - tig0018646:62394-62413 None:intergenic 35.0%
AAAGACAGAGAAAGAGAAAG+GGG - tig0018646:62669-62688 None:intergenic 35.0%
CTAAAGACAGAGAAAGAGAA+AGG - tig0018646:62671-62690 None:intergenic 35.0%
GCGAGAATTGAAAATTGAAG+AGG - tig0018646:62910-62929 None:intergenic 35.0%
CATTCTCTTAGAAAGAAGAG+TGG + tig0018646:63115-63134 Msa1368390:CDS 35.0%
!! TGTTAGCTCTGTTTCTATTG+AGG + tig0018646:63159-63178 Msa1368390:CDS 35.0%
! TTTTCGTCAGTCTTTGATCA+TGG + tig0018646:63219-63238 Msa1368390:CDS 35.0%
TGGTAATCATCAAAAGCTTC+AGG - tig0018646:63256-63275 None:intergenic 35.0%
!! AAGAGCACCTTAACATCATA+TGG - tig0018646:63276-63295 None:intergenic 35.0%
!!! TTTGGGCTTTAGTTTTCGTT+TGG + tig0018646:63501-63520 Msa1368390:intron 35.0%
! CGTTTGGTTTATGTTTCTGA+TGG + tig0018646:63517-63536 Msa1368390:intron 35.0%
! GTTTAGATGGATGATTTTGG+AGG + tig0018646:63578-63597 Msa1368390:intron 35.0%
!! TTAGATGGATGATTTTGGAG+GGG + tig0018646:63580-63599 Msa1368390:intron 35.0%
GTAAGGCAATCAATTACTTC+AGG - tig0018646:63643-63662 None:intergenic 35.0%
ATTTCTCAAACTCTTGCACA+TGG - tig0018646:63848-63867 None:intergenic 35.0%
ACCACAATCTTAGATGTTCA+AGG + tig0018646:63927-63946 Msa1368390:CDS 35.0%
! TCCTTGAACATCTAAGATTG+TGG - tig0018646:63931-63950 None:intergenic 35.0%
AATCTTAGATGTTCAAGGAG+TGG + tig0018646:63932-63951 Msa1368390:CDS 35.0%
! TTTTTGAACGCTACGTAACT+AGG + tig0018646:64168-64187 Msa1368390:intron 35.0%
ACCTAGTTATATCACACTGT+GGG - tig0018646:64219-64238 None:intergenic 35.0%
AACCTAGTTATATCACACTG+TGG - tig0018646:64220-64239 None:intergenic 35.0%
AGGATCAAGAAAAGACTTGA+CGG - tig0018646:64362-64381 None:intergenic 35.0%
!!! TGGATCTTTGAGGTTGTTTT+AGG - tig0018646:64382-64401 None:intergenic 35.0%
TTAACTTACGTGGATCTTTG+AGG - tig0018646:64392-64411 None:intergenic 35.0%
! AAGATGGCATTTAACTTACG+TGG - tig0018646:64402-64421 None:intergenic 35.0%
TAATGTTTCCAACCAAGCAT+CGG - tig0018646:64472-64491 None:intergenic 35.0%
CTTGGTTGGAAACATTACTT+AGG + tig0018646:64475-64494 Msa1368390:intron 35.0%
GGAAACATTACTTAGGTTCT+TGG + tig0018646:64482-64501 Msa1368390:intron 35.0%
TACTTGAAGTAATTGATGCC+AGG + tig0018646:64525-64544 Msa1368390:CDS 35.0%
AATTGATGCCAGGTACATTA+TGG + tig0018646:64535-64554 Msa1368390:intron 35.0%
GATGCCTTAGATCTGATAAA+GGG + tig0018646:64685-64704 Msa1368390:CDS 35.0%
TGAAGGTCATATGCTATTCT+TGG + tig0018646:64730-64749 Msa1368390:intron 35.0%
TAAAGGTTCTCAACAGTGAA+GGG + tig0018646:64862-64881 Msa1368390:CDS 35.0%
TGATTGTTGCCTTAATCAAG+TGG + tig0018646:64938-64957 Msa1368390:intron 35.0%
! AAATTGGCTCCACTTGATTA+AGG - tig0018646:64950-64969 None:intergenic 35.0%
TTAATCAAGTGGAGCCAATT+TGG + tig0018646:64949-64968 Msa1368390:intron 35.0%
! GCTTCACATATTTTTCTCAG+TGG + tig0018646:64973-64992 Msa1368390:intron 35.0%
! GAATAGCTCTTCATTGCTTT+TGG - tig0018646:65106-65125 None:intergenic 35.0%
TTGTTGCAGTCCACAATATT+TGG + tig0018646:65288-65307 Msa1368390:intron 35.0%
GAAGTTATGCTAACATGTCT+GGG + tig0018646:65442-65461 Msa1368390:CDS 35.0%
AAATTGAGGTTGTAATGGTG+TGG - tig0018646:65719-65738 None:intergenic 35.0%
! ATTGTGCTATAGCCTTTTTG+GGG + tig0018646:65770-65789 Msa1368390:intron 35.0%
! TCAAAAAGGCTTTTGATGAG+GGG + tig0018646:65864-65883 Msa1368390:intron 35.0%
! GTGTTTTGTATGTTAGGAAG+AGG - tig0018646:66048-66067 None:intergenic 35.0%
!! TCTGGAGTGTTTTGTATGTT+AGG - tig0018646:66054-66073 None:intergenic 35.0%
AACATACAAAACACTCCAGA+AGG + tig0018646:66054-66073 Msa1368390:CDS 35.0%
AGCAAATAACATCAGGAAGA+AGG - tig0018646:66112-66131 None:intergenic 35.0%
GGAAAAGAGCAAATAACATC+AGG - tig0018646:66119-66138 None:intergenic 35.0%
TGATATTGCAGGAAGTTTGT+TGG - tig0018646:66163-66182 None:intergenic 35.0%
ACATCAAGAAAGCGAAGTAA+TGG + tig0018646:66458-66477 Msa1368390:intron 35.0%
!! GCCCTAACATTTGATTTTTC+TGG + tig0018646:66652-66671 Msa1368390:intron 35.0%
! GATTTTTCTGGATTGTGCAT+AGG + tig0018646:66664-66683 Msa1368390:intron 35.0%
AGTGGATAGAGTTACAACAT+GGG - tig0018646:66971-66990 None:intergenic 35.0%
CATAGTACACTGAAAAACAG+TGG - tig0018646:66989-67008 None:intergenic 35.0%
!!! TGTATCTGGTTTGTTTTCCT+TGG + tig0018646:67108-67127 Msa1368390:three_prime_UTR 35.0%
! CAACTAAAGCTTTTCAACCA+AGG - tig0018646:67128-67147 None:intergenic 35.0%
! GGTTGAAAAGCTTTAGTTGT+TGG + tig0018646:67129-67148 Msa1368390:three_prime_UTR 35.0%
TATTCATGCGTGTTTACTTC+CGG + tig0018646:67421-67440 Msa1368390:three_prime_UTR 35.0%
TGATGAAAGGGTAAAAGAGG+AGG - tig0018646:62619-62638 None:intergenic 40.0%
AGCTGATGAAAGGGTAAAAG+AGG - tig0018646:62622-62641 None:intergenic 40.0%
TTGTAGGAGGGAGTTGAATT+AGG - tig0018646:62847-62866 None:intergenic 40.0%
GATGAAAGGAGAACCAGAAT+TGG + tig0018646:63049-63068 Msa1368390:CDS 40.0%
CTCTTAGAAAGAAGAGTGGT+AGG + tig0018646:63119-63138 Msa1368390:CDS 40.0%
TGAGGATGTTAGAGATGTTG+AGG + tig0018646:63177-63196 Msa1368390:CDS 40.0%
TGACATGCTACAATGGAGAA+GGG + tig0018646:63434-63453 Msa1368390:CDS 40.0%
CAAATCCAGGGATTTGGAAA+GGG - tig0018646:63613-63632 None:intergenic 40.0%
TCAAATCCAGGGATTTGGAA+AGG - tig0018646:63614-63633 None:intergenic 40.0%
TATGCTCAAATCCAGGGATT+TGG - tig0018646:63619-63638 None:intergenic 40.0%
!!! GCATCAGGATTTTGAGTTCA+AGG + tig0018646:63680-63699 Msa1368390:intron 40.0%
! GTTGTGAAGTATTACCCACA+TGG + tig0018646:63714-63733 Msa1368390:CDS 40.0%
! GTAACCTGCATCAGTTTGTT+CGG - tig0018646:63801-63820 None:intergenic 40.0%
ACTGATGCAGGTTACAACTA+TGG + tig0018646:63806-63825 Msa1368390:CDS 40.0%
ACTGTGGGAATAGTAACAGT+TGG - tig0018646:64204-64223 None:intergenic 40.0%
TCCCACAGTGTGATATAACT+AGG + tig0018646:64215-64234 Msa1368390:intron 40.0%
TCCACAACAGTCTAAATCCA+GGG - tig0018646:64336-64355 None:intergenic 40.0%
AATGTTTCCAACCAAGCATC+GGG - tig0018646:64471-64490 None:intergenic 40.0%
AGTGCGCAATGTGTTAAGTT+AGG - tig0018646:64607-64626 None:intergenic 40.0%
CACTTAATGTAGTGAGTTGC+CGG + tig0018646:64623-64642 Msa1368390:intron 40.0%
GGATGCCTTAGATCTGATAA+AGG + tig0018646:64684-64703 Msa1368390:CDS 40.0%
ATGGCCCTTTATCAGATCTA+AGG - tig0018646:64692-64711 None:intergenic 40.0%
TTAGATCTGATAAAGGGCCA+TGG + tig0018646:64691-64710 Msa1368390:CDS 40.0%
! ATACCCGTCTGACTTGTAAT+AGG + tig0018646:64767-64786 Msa1368390:intron 40.0%
TCAGCCTATTACAAGTCAGA+CGG - tig0018646:64774-64793 None:intergenic 40.0%
GTAAAGGTTCTCAACAGTGA+AGG + tig0018646:64861-64880 Msa1368390:CDS 40.0%
! TTTTGTTACTCTCACCGAAC+AGG + tig0018646:65021-65040 Msa1368390:intron 40.0%
! ATCGCTTCCTTTTACCTGTT+CGG - tig0018646:65038-65057 None:intergenic 40.0%
ATACATCTACTGCCGAATCA+GGG + tig0018646:65056-65075 Msa1368390:CDS 40.0%
ACTAATCTGACAGGACATTG+TGG + tig0018646:65210-65229 Msa1368390:intron 40.0%
ACTGCAACAAACAACAACCA+AGG - tig0018646:65278-65297 None:intergenic 40.0%
ATTTGTCAGGCTAAGATAGC+AGG + tig0018646:65414-65433 Msa1368390:intron 40.0%
GGAAGTTATGCTAACATGTC+TGG + tig0018646:65441-65460 Msa1368390:CDS 40.0%
TCAACAGGTTTGTCTACCAT+TGG - tig0018646:65483-65502 None:intergenic 40.0%
ACAAACCTGTTGATGCTGAA+TGG + tig0018646:65490-65509 Msa1368390:CDS 40.0%
! AAGAAGCCACCAACCTTTTA+AGG - tig0018646:65547-65566 None:intergenic 40.0%
!! TTAAAAGGTTGGTGGCTTCT+TGG + tig0018646:65546-65565 Msa1368390:intron 40.0%
! CAACCTCAATTTTGCATTCG+TGG + tig0018646:65727-65746 Msa1368390:intron 40.0%
CAACCACGAATGCAAAATTG+AGG - tig0018646:65733-65752 None:intergenic 40.0%
! TCCACGCTGATTGACAATTA+TGG + tig0018646:65801-65820 Msa1368390:intron 40.0%
TCCATAATTGTCAATCAGCG+TGG - tig0018646:65805-65824 None:intergenic 40.0%
! CAAAAAGGCTTTTGATGAGG+GGG + tig0018646:65865-65884 Msa1368390:intron 40.0%
! TAGTGCTTGATAGCATTGCT+TGG + tig0018646:65949-65968 Msa1368390:intron 40.0%
!! ATGTTTGTTGTCTCGAGAGT+TGG - tig0018646:66213-66232 None:intergenic 40.0%
AACTCTCGAGACAACAAACA+TGG + tig0018646:66212-66231 Msa1368390:CDS 40.0%
! TTCTCGTAAGGCATTTCAGA+TGG - tig0018646:66345-66364 None:intergenic 40.0%
! ATCTGAAATGCCTTACGAGA+AGG + tig0018646:66344-66363 Msa1368390:CDS 40.0%
GTCACCTCTTCTTGCTAAAA+TGG + tig0018646:66569-66588 Msa1368390:intron 40.0%
!!! CATGCCATTTTAGCAAGAAG+AGG - tig0018646:66576-66595 None:intergenic 40.0%
CTCTTCTTGCTAAAATGGCA+TGG + tig0018646:66574-66593 Msa1368390:intron 40.0%
GAGTTACAACATGGGTACAA+CGG - tig0018646:66963-66982 None:intergenic 40.0%
CAGTGGATAGAGTTACAACA+TGG - tig0018646:66972-66991 None:intergenic 40.0%
AGCTAGCAAAGATGCTATTC+TGG - tig0018646:67052-67071 None:intergenic 40.0%
TTCTTGCTTATCTTGTCCAC+TGG + tig0018646:67158-67177 Msa1368390:three_prime_UTR 40.0%
AGAGAGAAAAAGGAAGAGAG+AGG + tig0018646:67274-67293 Msa1368390:intron 40.0%
TTGCCTCATTCTTCATTCCC+TGG - tig0018646:62464-62483 None:intergenic 45.0%
!! TGTGGGTCCCACTTTAGTTT+TGG - tig0018646:62590-62609 None:intergenic 45.0%
AAAAGAGGAGGAGCAGTTGT+GGG - tig0018646:62607-62626 None:intergenic 45.0%
TAAAAGAGGAGGAGCAGTTG+TGG - tig0018646:62608-62627 None:intergenic 45.0%
TTTACCCTTTCATCAGCTGC+AGG + tig0018646:62624-62643 Msa1368390:five_prime_UTR 45.0%
AGGTCTAGCGAAACGATCAA+GGG - tig0018646:62879-62898 None:intergenic 45.0%
AAGGTCTAGCGAAACGATCA+AGG - tig0018646:62880-62899 None:intergenic 45.0%
!!! TCAGGTTTTGAGGGGTTTTC+TGG + tig0018646:62980-62999 Msa1368390:intron 45.0%
AGTGGTAGGAGAAAGAGTGA+TGG + tig0018646:63133-63152 Msa1368390:CDS 45.0%
CTGACATGCTACAATGGAGA+AGG + tig0018646:63433-63452 Msa1368390:CDS 45.0%
CTACAATGGAGAAGGGAGTT+TGG + tig0018646:63441-63460 Msa1368390:CDS 45.0%
TCAGGGTATGCTCAAATCCA+GGG - tig0018646:63625-63644 None:intergenic 45.0%
TTCAGGGTATGCTCAAATCC+AGG - tig0018646:63626-63645 None:intergenic 45.0%
TATTACCCACATGGCCATCA+TGG + tig0018646:63723-63742 Msa1368390:CDS 45.0%
CTTCCTTGTCTACACCATGA+TGG - tig0018646:63740-63759 None:intergenic 45.0%
CATCATGGTGTAGACAAGGA+AGG + tig0018646:63738-63757 Msa1368390:CDS 45.0%
ATGGTGTAGACAAGGAAGGA+AGG + tig0018646:63742-63761 Msa1368390:CDS 45.0%
TGATCCGAACAAACTGATGC+AGG + tig0018646:63794-63813 Msa1368390:CDS 45.0%
TTTGCAGCAATAGTGCAAGC+AGG - tig0018646:63888-63907 None:intergenic 45.0%
CTTGCACTATTGCTGCAAAG+AGG + tig0018646:63889-63908 Msa1368390:CDS 45.0%
GCTTTCAGTTGAACGCAAAG+AGG - tig0018646:63977-63996 None:intergenic 45.0%
TTGCGTTCAACTGAAAGCCA+AGG + tig0018646:63979-63998 Msa1368390:intron 45.0%
ACAATGAGATATCGCACCTC+GGG - tig0018646:64126-64145 None:intergenic 45.0%
GACAATGAGATATCGCACCT+CGG - tig0018646:64127-64146 None:intergenic 45.0%
TTTATCATAAATGCCGGCCC+TGG + tig0018646:64316-64335 Msa1368390:CDS 45.0%
CTCCACAACAGTCTAAATCC+AGG - tig0018646:64337-64356 None:intergenic 45.0%
TCATGGAGCCATAATGTACC+TGG - tig0018646:64546-64565 None:intergenic 45.0%
AGTGAGTTGCCGGAATTTCT+CGG + tig0018646:64633-64652 Msa1368390:intron 45.0%
CAGCCTATTACAAGTCAGAC+GGG - tig0018646:64773-64792 None:intergenic 45.0%
! AGAGTTACCATTGGGTATCG+TGG - tig0018646:64909-64928 None:intergenic 45.0%
CCATGCGAAGAGTTACCATT+GGG - tig0018646:64917-64936 None:intergenic 45.0%
ACTCTCACCGAACAGGTAAA+AGG + tig0018646:65028-65047 Msa1368390:intron 45.0%
GATACATCTACTGCCGAATC+AGG + tig0018646:65055-65074 Msa1368390:CDS 45.0%
TTCAGCTTCTGACCCTGATT+CGG - tig0018646:65071-65090 None:intergenic 45.0%
ACTTACTTCCTCACGAACAG+GGG - tig0018646:65143-65162 None:intergenic 45.0%
GACTTACTTCCTCACGAACA+GGG - tig0018646:65144-65163 None:intergenic 45.0%
AGACTTACTTCCTCACGAAC+AGG - tig0018646:65145-65164 None:intergenic 45.0%
TCAGGCTAAGATAGCAGGAA+AGG + tig0018646:65419-65438 Msa1368390:intron 45.0%
CAGGCTAAGATAGCAGGAAA+GGG + tig0018646:65420-65439 Msa1368390:intron 45.0%
CTCTTCCATTCAGCATCAAC+AGG - tig0018646:65498-65517 None:intergenic 45.0%
CTGTTGATGCTGAATGGAAG+AGG + tig0018646:65496-65515 Msa1368390:CDS 45.0%
AGAGGCAAACATCTCTACAG+AGG + tig0018646:65514-65533 Msa1368390:CDS 45.0%
CAGAGGTCTCACACCTTAAA+AGG + tig0018646:65531-65550 Msa1368390:CDS 45.0%
GGTCTCACACCTTAAAAGGT+TGG + tig0018646:65535-65554 Msa1368390:intron 45.0%
CTCACACCTTAAAAGGTTGG+TGG + tig0018646:65538-65557 Msa1368390:intron 45.0%
TTGCATTCGTGGTTGCAGTA+CGG + tig0018646:65738-65757 Msa1368390:intron 45.0%
!!! TGCTATAGCCTTTTTGGGGT+TGG + tig0018646:65774-65793 Msa1368390:intron 45.0%
AAGAGGACGTGTTCCTGTAT+TGG - tig0018646:66031-66050 None:intergenic 45.0%
CTCCAGAAGGAGTTAAAGCT+CGG + tig0018646:66067-66086 Msa1368390:CDS 45.0%
TCCAGAAGGAGTTAAAGCTC+GGG + tig0018646:66068-66087 Msa1368390:CDS 45.0%
AAGGAGTTAAAGCTCGGGTT+TGG + tig0018646:66073-66092 Msa1368390:CDS 45.0%
AGGAGTTAAAGCTCGGGTTT+GGG + tig0018646:66074-66093 Msa1368390:CDS 45.0%
!! CAGGAAGTTTGTTGGTCATG+CGG - tig0018646:66155-66174 None:intergenic 45.0%
! GATTTTCCTCTGTCTGTGCT+TGG - tig0018646:66257-66276 None:intergenic 45.0%
TCTTTCCCTCCTTGCTGAAA+AGG + tig0018646:66277-66296 Msa1368390:CDS 45.0%
! CCTAACCTTTTCAGCAAGGA+GGG - tig0018646:66285-66304 None:intergenic 45.0%
! ACCTAACCTTTTCAGCAAGG+AGG - tig0018646:66286-66305 None:intergenic 45.0%
! CTCACCTAACCTTTTCAGCA+AGG - tig0018646:66289-66308 None:intergenic 45.0%
GTTAGGTGAGCTTGAAGAGA+AGG + tig0018646:66299-66318 Msa1368390:CDS 45.0%
TGAAATGCCTTACGAGAAGG+CGG + tig0018646:66347-66366 Msa1368390:CDS 45.0%
AACAATTCCGCCTTCTCGTA+AGG - tig0018646:66357-66376 None:intergenic 45.0%
CCGTCTTCGGTAACAAATCT+GGG - tig0018646:66632-66651 None:intergenic 45.0%
!! CCCAGATTTGTTACCGAAGA+CGG + tig0018646:66629-66648 Msa1368390:intron 45.0%
!! CCAGATTTGTTACCGAAGAC+GGG + tig0018646:66630-66649 Msa1368390:intron 45.0%
! CTCTCTACGAAGCGTTAATG+AGG + tig0018646:66687-66706 Msa1368390:CDS 45.0%
AAGCCAAGTTGCGAGTAAGT+TGG + tig0018646:66747-66766 Msa1368390:intron 45.0%
ATGCCAACTTACTCGCAACT+TGG - tig0018646:66753-66772 None:intergenic 45.0%
GATAGAAAGATGCTCCACAG+AGG + tig0018646:66891-66910 Msa1368390:three_prime_UTR 45.0%
AGTACAACTGTGATCGTGCT+GGG - tig0018646:66928-66947 None:intergenic 45.0%
AAGTACAACTGTGATCGTGC+TGG - tig0018646:66929-66948 None:intergenic 45.0%
TTGAGAAAACGTCCCACCCA+AGG + tig0018646:62429-62448 Msa1368390:five_prime_UTR 50.0%
TGAGAAAACGTCCCACCCAA+GGG + tig0018646:62430-62449 Msa1368390:five_prime_UTR 50.0%
CCTCATTCTTCATTCCCTGG+CGG - tig0018646:62461-62480 None:intergenic 50.0%
ACTGCCTGCAGCTGATGAAA+GGG - tig0018646:62631-62650 None:intergenic 50.0%
CAACTCCCTCCTACAATGTC+TGG + tig0018646:62851-62870 Msa1368390:exon 50.0%
TCAAGGGGTCCAGACATTGT+AGG - tig0018646:62863-62882 None:intergenic 50.0%
GGTCTAGCGAAACGATCAAG+GGG - tig0018646:62878-62897 None:intergenic 50.0%
! TGTGGGCTGACATGCTACAA+TGG + tig0018646:63427-63446 Msa1368390:CDS 50.0%
!! TGGTGCTGACACCATTATGC+AGG + tig0018646:63461-63480 Msa1368390:CDS 50.0%
AGCTTCCCTTTCCAAATCCC+TGG + tig0018646:63605-63624 Msa1368390:intron 50.0%
CTACACCATGATGGCCATGT+GGG - tig0018646:63731-63750 None:intergenic 50.0%
TCTACACCATGATGGCCATG+TGG - tig0018646:63732-63751 None:intergenic 50.0%
TGGCCATCATGGTGTAGACA+AGG + tig0018646:63734-63753 Msa1368390:CDS 50.0%
CAACCGCTGAATGAGTTCAC+GGG - tig0018646:64079-64098 None:intergenic 50.0%
GCAACCGCTGAATGAGTTCA+CGG - tig0018646:64080-64099 None:intergenic 50.0%
ACTCATTCAGCGGTTGCAGA+AGG + tig0018646:64083-64102 Msa1368390:CDS 50.0%
CAATGAGATATCGCACCTCG+GGG - tig0018646:64125-64144 None:intergenic 50.0%
CAACAGTCTAAATCCAGGGC+CGG - tig0018646:64332-64351 None:intergenic 50.0%
GCCCTGGATTTAGACTGTTG+TGG + tig0018646:64332-64351 Msa1368390:CDS 50.0%
CAGGTACCTCCGAGAAATTC+CGG - tig0018646:64645-64664 None:intergenic 50.0%
TGGTTCTCAATGGCGAACCA+CGG + tig0018646:64823-64842 Msa1368390:CDS 50.0%
GCGGGCAAGACAAGTAGTAA+AGG + tig0018646:64845-64864 Msa1368390:CDS 50.0%
GGTTCTCAACAGTGAAGGGA+AGG + tig0018646:64866-64885 Msa1368390:CDS 50.0%
CCCAATGGTAACTCTTCGCA+TGG + tig0018646:64914-64933 Msa1368390:intron 50.0%
GCCATGCGAAGAGTTACCAT+TGG - tig0018646:64918-64937 None:intergenic 50.0%
TGGAGTAGCCAACCCCAAAA+AGG - tig0018646:65785-65804 None:intergenic 50.0%
TTGATGAGGGGGTCTGTTAG+AGG + tig0018646:65876-65895 Msa1368390:intron 50.0%
! ACCCGAGCTTTAACTCCTTC+TGG - tig0018646:66072-66091 None:intergenic 50.0%
TCATGCGGCAAGCAACTTGA+CGG - tig0018646:66140-66159 None:intergenic 50.0%
!! GTCTGTGCTTGGCTTGTTGA+AGG - tig0018646:66246-66265 None:intergenic 50.0%
AACAAGCCAAGCACAGACAG+AGG + tig0018646:66248-66267 Msa1368390:CDS 50.0%
CCCTCCTTGCTGAAAAGGTT+AGG + tig0018646:66282-66301 Msa1368390:CDS 50.0%
GGCGGAATTGTTGAATGCTG+CGG + tig0018646:66365-66384 Msa1368390:CDS 50.0%
CCCGTCTTCGGTAACAAATC+TGG - tig0018646:66633-66652 None:intergenic 50.0%
CAAATGTTAGGGCCCGTCTT+CGG - tig0018646:66645-66664 None:intergenic 50.0%
AGAAAGATGCTCCACAGAGG+AGG + tig0018646:66894-66913 Msa1368390:three_prime_UTR 50.0%
CCGCCAGGGAATGAAGAATG+AGG + tig0018646:62458-62477 Msa1368390:five_prime_UTR 55.0%
CACTGCCTGCAGCTGATGAA+AGG - tig0018646:62632-62651 None:intergenic 55.0%
GGGGTCCAGACATTGTAGGA+GGG - tig0018646:62859-62878 None:intergenic 55.0%
AGGGGTCCAGACATTGTAGG+AGG - tig0018646:62860-62879 None:intergenic 55.0%
CAGCCCGTGAACTCATTCAG+CGG + tig0018646:64073-64092 Msa1368390:CDS 55.0%
TGCTGACATTGCCCGATGCT+TGG + tig0018646:64457-64476 Msa1368390:intron 55.0%
GACATTGCCCGATGCTTGGT+TGG + tig0018646:64461-64480 Msa1368390:intron 55.0%
GAGTTGCCGGAATTTCTCGG+AGG + tig0018646:64636-64655 Msa1368390:CDS 55.0%
TACCTGCTCTTGTGCAGACG+AGG + tig0018646:64659-64678 Msa1368390:CDS 55.0%
ACCTGCTCTTGTGCAGACGA+GGG + tig0018646:64660-64679 Msa1368390:CDS 55.0%
TTCTCAATGGCGAACCACGG+CGG + tig0018646:64826-64845 Msa1368390:CDS 55.0%
TGCGAAGCCACGATACCCAA+TGG + tig0018646:64899-64918 Msa1368390:CDS 55.0%
CACGAACAGGGGTCAGTCTA+AGG - tig0018646:65132-65151 None:intergenic 55.0%
TAGACTGACCCCTGTTCGTG+AGG + tig0018646:65132-65151 Msa1368390:CDS 55.0%
CATCAGGAAGAAGGCAGCCA+GGG - tig0018646:66103-66122 None:intergenic 55.0%
ACATCAGGAAGAAGGCAGCC+AGG - tig0018646:66104-66123 None:intergenic 55.0%
TGTTGAATGCTGCGGTCTGC+CGG + tig0018646:66373-66392 Msa1368390:CDS 55.0%
! CTGCTTCCAAAGCATCCACC+CGG - tig0018646:66395-66414 None:intergenic 55.0%
GCTTGCTTACATAGACCGCC+AGG + tig0018646:66721-66740 Msa1368390:CDS 55.0%
GCAACTTGGCTTCTTCCTGG+CGG - tig0018646:66739-66758 None:intergenic 55.0%
CTCGCAACTTGGCTTCTTCC+TGG - tig0018646:66742-66761 None:intergenic 55.0%
GGGAGAAACATCCTCCTCTG+TGG - tig0018646:66908-66927 None:intergenic 55.0%
GAACGCGTGCTTCAACACAC+CGG - tig0018646:67443-67462 None:intergenic 55.0%
AAACGTCCCACCCAAGGGCA+AGG + tig0018646:62435-62454 Msa1368390:five_prime_UTR 60.0%
CAGCGGTTGCAGAAGGTCGA+CGG + tig0018646:64090-64109 Msa1368390:CDS 60.0%
CGACGGTGACAATTACCCCG+AGG + tig0018646:64107-64126 Msa1368390:CDS 60.0%
TCCCTCGTCTGCACAAGAGC+AGG - tig0018646:64664-64683 None:intergenic 60.0%
TGCTCTTGTGCAGACGAGGG+AGG + tig0018646:64663-64682 Msa1368390:CDS 60.0%
TCTCAATGGCGAACCACGGC+GGG + tig0018646:64827-64846 Msa1368390:CDS 60.0%
ACTACTTGTCTTGCCCGCCG+TGG - tig0018646:64843-64862 None:intergenic 60.0%
GTTGAATGCTGCGGTCTGCC+GGG + tig0018646:66374-66393 Msa1368390:CDS 60.0%
AGCTCGGGTTTGGGTAGCCC+TGG + tig0018646:66083-66102 Msa1368390:CDS 65.0%
GGTCTGCCGGGTGGATGCTT+TGG + tig0018646:66386-66405 Msa1368390:CDS 65.0%
TGGCGGCCTTGCCCTTGGGT+GGG - tig0018646:62444-62463 None:intergenic 70.0%
ACCCAAGGGCAAGGCCGCCA+GGG + tig0018646:62444-62463 Msa1368390:five_prime_UTR 70.0%
TCCCTGGCGGCCTTGCCCTT+GGG - tig0018646:62448-62467 None:intergenic 70.0%
TTCCCTGGCGGCCTTGCCCT+TGG - tig0018646:62449-62468 None:intergenic 70.0%
GAATGCTGCGGTCTGCCGGG+TGG + tig0018646:66377-66396 Msa1368390:CDS 70.0%
CTGGCGGCCTTGCCCTTGGG+TGG - tig0018646:62445-62464 None:intergenic 75.0%
CACCCAAGGGCAAGGCCGCC+AGG + tig0018646:62443-62462 Msa1368390:five_prime_UTR 75.0%
Chromosome Type Strat End Strand Name
tig0018646 gene 62384 67488 62384 ID=Msa1368390;Name=Msa1368390
tig0018646 mRNA 62384 67488 62384 ID=Msa1368390-mRNA-1;Parent=Msa1368390;Name=Msa1368390-mRNA-1;_AED=0.14;_eAED=0.14;_QI=482|1|1|1|0.92|0.86|15|416|623
tig0018646 exon 62384 62899 62384 ID=Msa1368390-mRNA-1:exon:404;Parent=Msa1368390-mRNA-1
tig0018646 exon 62984 63287 62984 ID=Msa1368390-mRNA-1:exon:405;Parent=Msa1368390-mRNA-1
tig0018646 exon 63383 63482 63383 ID=Msa1368390-mRNA-1:exon:406;Parent=Msa1368390-mRNA-1
tig0018646 exon 63687 63953 63687 ID=Msa1368390-mRNA-1:exon:407;Parent=Msa1368390-mRNA-1
tig0018646 exon 64051 64128 64051 ID=Msa1368390-mRNA-1:exon:408;Parent=Msa1368390-mRNA-1
tig0018646 exon 64301 64402 64301 ID=Msa1368390-mRNA-1:exon:409;Parent=Msa1368390-mRNA-1
tig0018646 exon 64497 64546 64497 ID=Msa1368390-mRNA-1:exon:410;Parent=Msa1368390-mRNA-1
tig0018646 exon 64635 64734 64635 ID=Msa1368390-mRNA-1:exon:411;Parent=Msa1368390-mRNA-1
tig0018646 exon 64822 64920 64822 ID=Msa1368390-mRNA-1:exon:412;Parent=Msa1368390-mRNA-1
tig0018646 exon 65043 65156 65043 ID=Msa1368390-mRNA-1:exon:413;Parent=Msa1368390-mRNA-1
tig0018646 exon 65423 65552 65423 ID=Msa1368390-mRNA-1:exon:414;Parent=Msa1368390-mRNA-1
tig0018646 exon 66037 66434 66037 ID=Msa1368390-mRNA-1:exon:415;Parent=Msa1368390-mRNA-1
tig0018646 exon 66686 66760 66686 ID=Msa1368390-mRNA-1:exon:416;Parent=Msa1368390-mRNA-1
tig0018646 exon 66859 67189 66859 ID=Msa1368390-mRNA-1:exon:417;Parent=Msa1368390-mRNA-1
tig0018646 exon 67383 67488 67383 ID=Msa1368390-mRNA-1:exon:418;Parent=Msa1368390-mRNA-1
tig0018646 five_prime_UTR 62384 62865 62384 ID=Msa1368390-mRNA-1:five_prime_utr;Parent=Msa1368390-mRNA-1
tig0018646 CDS 62866 62899 62866 ID=Msa1368390-mRNA-1:cds;Parent=Msa1368390-mRNA-1
tig0018646 CDS 62984 63287 62984 ID=Msa1368390-mRNA-1:cds;Parent=Msa1368390-mRNA-1
tig0018646 CDS 63383 63482 63383 ID=Msa1368390-mRNA-1:cds;Parent=Msa1368390-mRNA-1
tig0018646 CDS 63687 63953 63687 ID=Msa1368390-mRNA-1:cds;Parent=Msa1368390-mRNA-1
tig0018646 CDS 64051 64128 64051 ID=Msa1368390-mRNA-1:cds;Parent=Msa1368390-mRNA-1
tig0018646 CDS 64301 64402 64301 ID=Msa1368390-mRNA-1:cds;Parent=Msa1368390-mRNA-1
tig0018646 CDS 64497 64546 64497 ID=Msa1368390-mRNA-1:cds;Parent=Msa1368390-mRNA-1
tig0018646 CDS 64635 64734 64635 ID=Msa1368390-mRNA-1:cds;Parent=Msa1368390-mRNA-1
tig0018646 CDS 64822 64920 64822 ID=Msa1368390-mRNA-1:cds;Parent=Msa1368390-mRNA-1
tig0018646 CDS 65043 65156 65043 ID=Msa1368390-mRNA-1:cds;Parent=Msa1368390-mRNA-1
tig0018646 CDS 65423 65552 65423 ID=Msa1368390-mRNA-1:cds;Parent=Msa1368390-mRNA-1
tig0018646 CDS 66037 66434 66037 ID=Msa1368390-mRNA-1:cds;Parent=Msa1368390-mRNA-1
tig0018646 CDS 66686 66760 66686 ID=Msa1368390-mRNA-1:cds;Parent=Msa1368390-mRNA-1
tig0018646 CDS 66859 66879 66859 ID=Msa1368390-mRNA-1:cds;Parent=Msa1368390-mRNA-1
tig0018646 three_prime_UTR 66880 67189 66880 ID=Msa1368390-mRNA-1:three_prime_utr;Parent=Msa1368390-mRNA-1
tig0018646 three_prime_UTR 67383 67488 67383 ID=Msa1368390-mRNA-1:three_prime_utr;Parent=Msa1368390-mRNA-1
Gene Sequence

>Msa1368390

ATGTCTGGACCCCTTGATCGTTTCGCTAGACCTTGTTTTGAGGGGTTTTCTGGCAGTGATGAGAAGCGAGAGAGAAGATCTGATTTTGAGAATTCAGAAGATGAAAGGAGAACCAGAATTGGATCCTTAAAAAAGAAAGCTTTAAGTGCATCAACCAAGTTTAAGCATTCTCTTAGAAAGAAGAGTGGTAGGAGAAAGAGTGATGGACGTGTTAGCTCTGTTTCTATTGAGGATGTTAGAGATGTTGAGGAGCTTCAAGCTGTTGATGCTTTTCGTCAGTCTTTGATCATGGATGAGTTGCTTCCTGAAGCTTTTGATGATTACCATATGATGTTAAGATTTCTGAAAGCAAGGAAATTTGATATTGAAAAAGCAAAGCATATGTGGGCTGACATGCTACAATGGAGAAGGGAGTTTGGTGCTGACACCATTATGCAGGATTTTGAGTTCAAGGAGTTAAATGAAGTTGTGAAGTATTACCCACATGGCCATCATGGTGTAGACAAGGAAGGAAGGCCTGTTTATATTGAAAGACTTGGAAAAGTTGATCCGAACAAACTGATGCAGGTTACAACTATGGATAGATATGTTAAGTACCATGTGCAAGAGTTTGAGAAATCTTTTGCAATAAAGTTTCCTGCTTGCACTATTGCTGCAAAGAGGCACATAGATTCAAGCACCACAATCTTAGATGTTCAAGGAGTGGGCCTTAAGAATTTTACAAAGTCAGCCCGTGAACTCATTCAGCGGTTGCAGAAGGTCGACGGTGACAATTACCCCGAGACACTCTGCCAAATGTTTATCATAAATGCCGGCCCTGGATTTAGACTGTTGTGGAGCACCGTCAAGTCTTTTCTTGATCCTAAAACAACCTCAAAGATCCACGTTCTTGGAAACAAGTATCAGAGCAAATTACTTGAAGTAATTGATGCCAGTGAGTTGCCGGAATTTCTCGGAGGTACCTGCTCTTGTGCAGACGAGGGAGGATGCCTTAGATCTGATAAAGGGCCATGGAAAAATCCTGAAATATTGAAGATGGTTCTCAATGGCGAACCACGGCGGGCAAGACAAGTAGTAAAGGTTCTCAACAGTGAAGGGAAGGTTATTGCATATGCGAAGCCACGATACCCAATGGTAAAAGGAAGCGATACATCTACTGCCGAATCAGGGTCAGAAGCTGAAGATATAGCTTCTCCAAAAGCAATGAAGAGCTATTCACACCTTAGACTGACCCCTGTTCGTGAGGAAGCTAAGATAGCAGGAAAGGGAAGTTATGCTAACATGTCTGGGTATGATGAATATGTTCCAATGGTAGACAAACCTGTTGATGCTGAATGGAAGAGGCAAACATCTCTACAGAGGTCTCACACCTTAAAAGGAACACGTCCTCTTCCTAACATACAAAACACTCCAGAAGGAGTTAAAGCTCGGGTTTGGGTAGCCCTGGCTGCCTTCTTCCTGATGTTATTTGCTCTTTTCCGTCAAGTTGCTTGCCGCATGACCAACAAACTTCCTGCAATATCATCTAATGATGATCAGAGAATTTCAGAACCAACTCTCGAGACAACAAACATGGAAGTTCTTCCTTCAACAAGCCAAGCACAGACAGAGGAAAATCTCTTTCCCTCCTTGCTGAAAAGGTTAGGTGAGCTTGAAGAGAAGGTTGACACACTACAATCTAAGCCATCTGAAATGCCTTACGAGAAGGCGGAATTGTTGAATGCTGCGGTCTGCCGGGTGGATGCTTTGGAAGCAGAGTTAATTGCTACTAAAAAGGCTCTCTACGAAGCGTTAATGAGGCAAGAAGAGCTGCTTGCTTACATAGACCGCCAGGAAGAAGCCAAGTTGCGAAAAAAGAAGTTTTGCTGGTGA
Protein sequence

>Msa1368390

MSGPLDRFARPCFEGFSGSDEKRERRSDFENSEDERRTRIGSLKKKALSASTKFKHSLRKKSGRRKSDGRVSSVSIEDVRDVEELQAVDAFRQSLIMDELLPEAFDDYHMMLRFLKARKFDIEKAKHMWADMLQWRREFGADTIMQDFEFKELNEVVKYYPHGHHGVDKEGRPVYIERLGKVDPNKLMQVTTMDRYVKYHVQEFEKSFAIKFPACTIAAKRHIDSSTTILDVQGVGLKNFTKSARELIQRLQKVDGDNYPETLCQMFIINAGPGFRLLWSTVKSFLDPKTTSKIHVLGNKYQSKLLEVIDASELPEFLGGTCSCADEGGCLRSDKGPWKNPEILKMVLNGEPRRARQVVKVLNSEGKVIAYAKPRYPMVKGSDTSTAESGSEAEDIASPKAMKSYSHLRLTPVREEAKIAGKGSYANMSGYDEYVPMVDKPVDAEWKRQTSLQRSHTLKGTRPLPNIQNTPEGVKARVWVALAAFFLMLFALFRQVACRMTNKLPAISSNDDQRISEPTLETTNMEVLPSTSQAQTEENLFPSLLKRLGELEEKVDTLQSKPSEMPYEKAELLNAAVCRVDALEAELIATKKALYEALMRQEELLAYIDRQEEAKLRKKKFCW*