Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0921390 | XP_003619782.1 | 86.702 | 376 | 9 | 1 | 3 | 337 | 2 | 377 | 0.0 | 646 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0921390 | sp|Q8LEB2|ADHL6_ARATH | 69.291 | 381 | 73 | 2 | 1 | 337 | 1 | 381 | 0.0 | 537 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0013270 | Msa0921390 | 0.802182 | 6.332565e-49 | -8.615850e-47 |
| Msa0044530 | Msa0921390 | -0.804902 | 1.728122e-49 | -8.615850e-47 |
| Msa0045810 | Msa0921390 | 0.805738 | 1.154804e-49 | -8.615850e-47 |
| Msa0046870 | Msa0921390 | 0.821227 | 4.515452e-53 | -8.615850e-47 |
| Msa0091240 | Msa0921390 | -0.805912 | 1.061319e-49 | -8.615850e-47 |
| Msa0610700 | Msa0921390 | -0.812948 | 3.279232e-51 | -8.615850e-47 |
| Msa0716890 | Msa0921390 | 0.809750 | 1.621588e-50 | -8.615850e-47 |
| Msa0775660 | Msa0921390 | 0.809350 | 1.976136e-50 | -8.615850e-47 |
| Msa0799450 | Msa0921390 | 0.801202 | 1.006461e-48 | -8.615850e-47 |
| Msa0813160 | Msa0921390 | 0.816497 | 5.364320e-52 | -8.615850e-47 |
| Msa0837710 | Msa0921390 | 0.804830 | 1.789179e-49 | -8.615850e-47 |
| Msa0838620 | Msa0921390 | -0.823448 | 1.377778e-53 | -8.615850e-47 |
| Msa0139500 | Msa0921390 | 0.803464 | 3.443574e-49 | -8.615850e-47 |
| Msa0187540 | Msa0921390 | 0.817237 | 3.658766e-52 | -8.615850e-47 |
| Msa0386880 | Msa0921390 | 0.826005 | 3.439988e-54 | -8.615850e-47 |
| Msa0389690 | Msa0921390 | 0.808178 | 3.518414e-50 | -8.615850e-47 |
| Msa0437480 | Msa0921390 | 0.804057 | 2.592614e-49 | -8.615850e-47 |
| Msa0440350 | Msa0921390 | 0.807575 | 4.728370e-50 | -8.615850e-47 |
| Msa0444380 | Msa0921390 | 0.804358 | 2.244717e-49 | -8.615850e-47 |
| Msa0481630 | Msa0921390 | 0.815229 | 1.029059e-51 | -8.615850e-47 |
| Msa0276850 | Msa0921390 | 0.803985 | 2.683468e-49 | -8.615850e-47 |
| Msa0276860 | Msa0921390 | 0.807221 | 5.619406e-50 | -8.615850e-47 |
| Msa0326710 | Msa0921390 | 0.816542 | 5.241859e-52 | -8.615850e-47 |
| Msa0354840 | Msa0921390 | 0.815364 | 9.601572e-52 | -8.615850e-47 |
| Msa0484210 | Msa0921390 | -0.821991 | 3.008218e-53 | -8.615850e-47 |
| Msa0525880 | Msa0921390 | 0.811809 | 5.813636e-51 | -8.615850e-47 |
| Msa0565700 | Msa0921390 | 0.801422 | 9.071952e-49 | -8.615850e-47 |
| Msa0574900 | Msa0921390 | 0.802969 | 4.358926e-49 | -8.615850e-47 |
| Msa0601380 | Msa0921390 | 0.814579 | 1.434035e-51 | -8.615850e-47 |
| Msa0880910 | Msa0921390 | 0.800710 | 1.268728e-48 | -8.615850e-47 |
| Msa0903340 | Msa0921390 | 0.802793 | 4.739457e-49 | -8.615850e-47 |
| Msa0921390 | Msa0930770 | 0.818779 | 1.640310e-52 | -8.615850e-47 |
| Msa0921390 | Msa0960420 | 0.804500 | 2.097218e-49 | -8.615850e-47 |
| Msa0921390 | Msa0967780 | 0.802947 | 4.404581e-49 | -8.615850e-47 |
| Msa0921390 | Msa1022420 | 0.801281 | 9.696597e-49 | -8.615850e-47 |
| Msa0921390 | Msa1044250 | 0.806577 | 7.689994e-50 | -8.615850e-47 |
| Msa0921390 | Msa1106590 | 0.843527 | 1.326684e-58 | -8.615850e-47 |
| Msa0921390 | Msa1149910 | 0.818022 | 2.434921e-52 | -8.615850e-47 |
| Msa0921390 | Msa1165460 | 0.811791 | 5.868021e-51 | -8.615850e-47 |
| Msa0921390 | Msa1339990 | 0.814963 | 1.178804e-51 | -8.615850e-47 |
| Msa0921390 | Msa1365820 | 0.816220 | 6.187734e-52 | -8.615850e-47 |
| Msa0921390 | Msa1368390 | 0.831175 | 1.937742e-55 | -8.615850e-47 |
| Msa0921390 | Msa1402010 | 0.807794 | 4.247067e-50 | -8.615850e-47 |
| Msa0921390 | Msa1413130 | 0.817477 | 3.231241e-52 | -8.615850e-47 |
| Msa0921390 | Msa1421630 | 0.820604 | 6.282912e-53 | -8.615850e-47 |
| Msa0921390 | Msa1457770 | 0.810943 | 8.965497e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0921390 | MtrunA17_Chr6g0478081 | 86.702 | 376 | 9 | 1 | 3 | 337 | 2 | 377 | 0.0 | 646 |
| Msa0921390 | MtrunA17_Chr3g0125911 | 49.337 | 377 | 146 | 3 | 4 | 335 | 2 | 378 | 9.12e-130 | 375 |
| Msa0921390 | MtrunA17_Chr7g0262421 | 49.474 | 380 | 146 | 4 | 1 | 335 | 1 | 379 | 7.33e-129 | 373 |
| Msa0921390 | MtrunA17_Chr1g0183131 | 49.731 | 372 | 142 | 3 | 9 | 335 | 6 | 377 | 2.09e-128 | 372 |
| Msa0921390 | MtrunA17_Chr3g0125961 | 48.276 | 377 | 150 | 3 | 4 | 335 | 2 | 378 | 2.71e-128 | 372 |
| Msa0921390 | MtrunA17_Chr3g0125941 | 47.884 | 378 | 152 | 3 | 3 | 335 | 2 | 379 | 1.53e-126 | 367 |
| Msa0921390 | MtrunA17_Chr5g0440521 | 46.736 | 383 | 157 | 4 | 2 | 337 | 9 | 391 | 1.80e-114 | 337 |
| Msa0921390 | MtrunA17_Chr7g0242291 | 46.194 | 381 | 156 | 5 | 4 | 335 | 13 | 393 | 5.47e-111 | 328 |
| Msa0921390 | MtrunA17_Chr3g0118441 | 44.010 | 384 | 166 | 5 | 1 | 335 | 1 | 384 | 1.31e-107 | 319 |
| Msa0921390 | MtrunA17_Chr3g0132351 | 47.861 | 374 | 146 | 4 | 11 | 335 | 16 | 389 | 1.34e-102 | 306 |
| Msa0921390 | MtrunA17_Chr7g0242301 | 48.000 | 325 | 153 | 4 | 27 | 335 | 1 | 325 | 1.36e-96 | 289 |
| Msa0921390 | MtrunA17_Chr5g0419681 | 39.572 | 374 | 182 | 4 | 5 | 335 | 2 | 374 | 5.11e-90 | 274 |
| Msa0921390 | MtrunA17_Chr4g0021211 | 38.606 | 373 | 186 | 3 | 5 | 335 | 27 | 398 | 4.92e-88 | 270 |
| Msa0921390 | MtrunA17_Chr3g0118431 | 40.727 | 275 | 116 | 4 | 96 | 326 | 18 | 289 | 7.08e-66 | 209 |
| Msa0921390 | MtrunA17_Chr8g0385221 | 28.075 | 374 | 213 | 12 | 14 | 335 | 55 | 424 | 1.05e-30 | 120 |
| Msa0921390 | MtrunA17_Chr6g0474141 | 29.104 | 268 | 152 | 9 | 18 | 272 | 19 | 261 | 6.56e-17 | 80.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0921390 | AT5G24760.1 | 69.291 | 381 | 73 | 2 | 1 | 337 | 1 | 381 | 0.0 | 537 |
| Msa0921390 | AT5G24760.2 | 69.318 | 352 | 67 | 1 | 27 | 337 | 1 | 352 | 1.24e-180 | 504 |
| Msa0921390 | AT5G24760.3 | 69.318 | 352 | 67 | 1 | 27 | 337 | 1 | 352 | 1.24e-180 | 504 |
| Msa0921390 | AT1G77120.1 | 50.663 | 377 | 139 | 4 | 5 | 335 | 2 | 377 | 8.24e-133 | 384 |
| Msa0921390 | AT5G43940.1 | 50.000 | 374 | 142 | 3 | 9 | 337 | 6 | 379 | 5.61e-129 | 374 |
| Msa0921390 | AT5G24760.4 | 65.918 | 267 | 50 | 1 | 112 | 337 | 1 | 267 | 8.52e-127 | 364 |
| Msa0921390 | AT5G43940.2 | 48.187 | 386 | 143 | 4 | 9 | 337 | 6 | 391 | 1.03e-124 | 363 |
| Msa0921390 | AT1G64710.1 | 47.200 | 375 | 150 | 4 | 9 | 335 | 6 | 380 | 1.08e-120 | 353 |
| Msa0921390 | AT5G42250.1 | 45.812 | 382 | 159 | 5 | 2 | 335 | 8 | 389 | 3.31e-111 | 329 |
| Msa0921390 | AT1G64710.2 | 45.098 | 357 | 148 | 4 | 27 | 335 | 1 | 357 | 7.87e-109 | 322 |
| Msa0921390 | AT1G32780.1 | 41.406 | 384 | 170 | 4 | 9 | 337 | 7 | 390 | 9.43e-109 | 323 |
| Msa0921390 | AT1G22440.1 | 47.090 | 378 | 146 | 5 | 11 | 337 | 12 | 386 | 1.23e-108 | 322 |
| Msa0921390 | AT1G22430.2 | 45.995 | 387 | 151 | 6 | 4 | 337 | 7 | 388 | 1.36e-108 | 322 |
| Msa0921390 | AT1G22430.1 | 45.995 | 387 | 151 | 6 | 4 | 337 | 7 | 388 | 1.36e-108 | 322 |
| Msa0921390 | AT4G22110.2 | 47.090 | 378 | 146 | 5 | 11 | 337 | 15 | 389 | 5.82e-108 | 320 |
| Msa0921390 | AT4G22110.1 | 47.090 | 378 | 146 | 5 | 11 | 337 | 15 | 389 | 5.82e-108 | 320 |
| Msa0921390 | AT1G22430.3 | 50.534 | 281 | 122 | 5 | 4 | 272 | 7 | 282 | 9.17e-87 | 264 |
| Msa0921390 | AT1G64710.3 | 43.464 | 306 | 129 | 3 | 74 | 335 | 6 | 311 | 6.21e-86 | 261 |
| Msa0921390 | AT1G22430.4 | 50.588 | 255 | 110 | 4 | 4 | 247 | 7 | 256 | 2.52e-79 | 244 |
| Msa0921390 | AT1G22430.5 | 50.588 | 255 | 110 | 4 | 4 | 247 | 7 | 256 | 2.52e-79 | 244 |
| Msa0921390 | AT4G22110.3 | 52.439 | 246 | 105 | 3 | 11 | 247 | 15 | 257 | 1.24e-78 | 242 |
| Msa0921390 | AT5G63620.1 | 27.945 | 365 | 208 | 13 | 14 | 327 | 57 | 417 | 9.41e-29 | 115 |
| Msa0921390 | AT5G63620.2 | 27.945 | 365 | 208 | 13 | 14 | 327 | 57 | 417 | 1.09e-28 | 115 |
| Msa0921390 | AT5G63620.3 | 30.980 | 255 | 161 | 9 | 14 | 257 | 57 | 307 | 1.12e-25 | 105 |
| Msa0921390 | AT5G51970.1 | 24.189 | 339 | 183 | 11 | 37 | 326 | 41 | 354 | 9.20e-14 | 72.0 |
| Msa0921390 | AT5G51970.2 | 24.189 | 339 | 183 | 11 | 37 | 326 | 41 | 354 | 9.20e-14 | 72.0 |
Find 118 sgRNAs with CRISPR-Local
Find 349 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAGACAAGATTTACAGTAAA+AGG | 0.163487 | 6_2:-58654859 | Msa0921390:CDS |
| AACTAATATTTGTCAAGTTT+TGG | 0.171217 | 6_2:-58654917 | Msa0921390:CDS |
| GCCATATTTCCTCGCATATT+TGG | 0.189832 | 6_2:-58655722 | Msa0921390:CDS |
| ACCATTGGAGATTAGGATTA+AGG | 0.205928 | 6_2:-58656806 | Msa0921390:CDS |
| GCCAAATATGCGAGGAAATA+TGG | 0.248039 | 6_2:+58655721 | None:intergenic |
| CTGACAGGAAGAACTTTAAA+AGG | 0.257915 | 6_2:-58653435 | Msa0921390:intron |
| TACCACACAGCTAAATCTTT+TGG | 0.263883 | 6_2:-58653933 | Msa0921390:intron |
| AAGCAGGACAGAAGGGGATT+TGG | 0.279255 | 6_2:+58652456 | None:intergenic |
| GGATCCACGGTGGTTATATT+TGG | 0.291570 | 6_2:-58654337 | Msa0921390:CDS |
| AATTTCTGAGACGAATATAT+TGG | 0.302996 | 6_2:+58652524 | None:intergenic |
| GCGGATTAGCTTTAAACTTT+GGG | 0.303403 | 6_2:-58652601 | Msa0921390:three_prime_UTR |
| AGGGGTGCATCTAGAATAAT+TGG | 0.320329 | 6_2:-58654085 | Msa0921390:CDS |
| AATCCACAGAAGTGTGAAAA+TGG | 0.320595 | 6_2:-58654052 | Msa0921390:intron |
| GGAACTGCACTCACCTTTGC+AGG | 0.322567 | 6_2:+58656995 | None:intergenic |
| GAATACACAGTTGTTCATTC+TGG | 0.335258 | 6_2:-58654796 | Msa0921390:CDS |
| AGCAGGACAGAAGGGGATTT+GGG | 0.336173 | 6_2:+58652457 | None:intergenic |
| CTCCTCAACCATTGGAGATT+AGG | 0.340698 | 6_2:-58656813 | Msa0921390:CDS |
| TCTAGATGCACCCCTTAGTT+TGG | 0.343778 | 6_2:+58654093 | None:intergenic |
| ACTTTAAAAGGATCTTTATT+CGG | 0.356032 | 6_2:-58653423 | Msa0921390:CDS |
| ATTCCCATTCAAAATATAAT+CGG | 0.358738 | 6_2:-58652350 | Msa0921390:three_prime_UTR |
| GGCTTGTTTCTTTCATGAAA+GGG | 0.360348 | 6_2:-58652640 | Msa0921390:three_prime_UTR |
| TGTGTTTACGAGTTGGATTA+TGG | 0.373769 | 6_2:-58652487 | Msa0921390:three_prime_UTR |
| AGCGGATTAGCTTTAAACTT+TGG | 0.373931 | 6_2:-58652602 | Msa0921390:three_prime_UTR |
| TCATGCAGGCTGTGCAAATC+AGG | 0.386476 | 6_2:-58654943 | Msa0921390:CDS |
| TCGTAGTGATCTTTCTGCTT+GGG | 0.388667 | 6_2:-58656764 | Msa0921390:CDS |
| ATATTTGGCCACGAAGCATC+TGG | 0.392686 | 6_2:-58655707 | Msa0921390:CDS |
| ACATGCCAAGATAATTCCTT+TGG | 0.401386 | 6_2:-58652661 | Msa0921390:exon |
| GGCATTGGTGATGGAGGAAG+TGG | 0.403806 | 6_2:-58656845 | Msa0921390:CDS |
| CTTAGCTGTGGGGTTTCTGC+AGG | 0.404405 | 6_2:-58654724 | Msa0921390:intron |
| TTGCGCAAGGGGCCAAACTA+AGG | 0.404409 | 6_2:-58654105 | Msa0921390:CDS |
| CTTTGCAGGTTATGACTTGA+GGG | 0.413577 | 6_2:+58657009 | None:intergenic |
| ATATTTGGTCTTGGAACTGT+TGG | 0.421795 | 6_2:-58654322 | Msa0921390:CDS |
| GTGTTATGTAGTCATCAATC+TGG | 0.423973 | 6_2:+58652759 | None:intergenic |
| TGGCTTGTTTCTTTCATGAA+AGG | 0.424201 | 6_2:-58652641 | Msa0921390:three_prime_UTR |
| ACACCGCAATAATGATAAAC+AGG | 0.427206 | 6_2:+58654832 | None:intergenic |
| CCTTTGCAGGTTATGACTTG+AGG | 0.431283 | 6_2:+58657008 | None:intergenic |
| ACGGTGGTTATATTTGGTCT+TGG | 0.445170 | 6_2:-58654331 | Msa0921390:CDS |
| GTCGTAGTGATCTTTCTGCT+TGG | 0.448380 | 6_2:-58656765 | Msa0921390:CDS |
| CTCCACCTACCACTCCTAGA+TGG | 0.448743 | 6_2:-58657160 | Msa0921390:five_prime_UTR |
| CTCAGAAATTAAATTTCGTA+AGG | 0.451198 | 6_2:-58652511 | Msa0921390:three_prime_UTR |
| ACAAGCCAAAGGAATTATCT+TGG | 0.468138 | 6_2:+58652656 | None:intergenic |
| TGCGCAAGGGGCCAAACTAA+GGG | 0.472900 | 6_2:-58654104 | Msa0921390:CDS |
| GCTGCAGTAGCATGGGGAGC+TGG | 0.479502 | 6_2:-58656871 | Msa0921390:CDS |
| AGCTGGAGAGGCATTGGTGA+TGG | 0.483911 | 6_2:-58656854 | Msa0921390:CDS |
| AGACAAGATTTACAGTAAAA+GGG | 0.484730 | 6_2:-58654858 | Msa0921390:CDS |
| GGTGGTAGGTTCCTCCATCT+AGG | 0.486427 | 6_2:+58657146 | None:intergenic |
| AAGGATCTTTATTCGGAGGA+TGG | 0.488243 | 6_2:-58653416 | Msa0921390:CDS |
| ATGGGGAGCTGGAGAGGCAT+TGG | 0.489033 | 6_2:-58656860 | Msa0921390:CDS |
| TTGGTAGTAGTGGTGGTGGT+AGG | 0.489094 | 6_2:+58657132 | None:intergenic |
| AAATATGCATTCTTAGCTGT+GGG | 0.493066 | 6_2:-58654735 | Msa0921390:CDS |
| GTTGTTGTTGTTGGTAGTAG+TGG | 0.498583 | 6_2:+58657122 | None:intergenic |
| ACAAACAGCTGCAGTAGCAT+GGG | 0.502030 | 6_2:-58656878 | Msa0921390:intron |
| GCAGGATTGTTGAGAGCGTA+GGG | 0.505817 | 6_2:-58655029 | Msa0921390:intron |
| GTAAGGGTGTGTTTACGAGT+TGG | 0.507854 | 6_2:-58652494 | Msa0921390:three_prime_UTR |
| TGCAGGATTGTTGAGAGCGT+AGG | 0.508503 | 6_2:-58655030 | Msa0921390:intron |
| ATTGTTGAGAGCGTAGGGCT+AGG | 0.509736 | 6_2:-58655024 | Msa0921390:CDS |
| ATCCTAATCTCCAATGGTTG+AGG | 0.520022 | 6_2:+58656811 | None:intergenic |
| TAGGAGAATGCATGTCATGC+AGG | 0.520032 | 6_2:-58654957 | Msa0921390:CDS |
| AGTCAGTCCTCCTCAACCAT+TGG | 0.520494 | 6_2:-58656821 | Msa0921390:CDS |
| AACAAACAGCTGCAGTAGCA+TGG | 0.525473 | 6_2:-58656879 | Msa0921390:intron |
| CAATCAACACACAGTTATGA+AGG | 0.525477 | 6_2:+58652373 | None:intergenic |
| GAATAATCGACCTGCACGAT+AGG | 0.525925 | 6_2:+58653873 | None:intergenic |
| ATTAAGTGCATTACTGATGG+TGG | 0.526528 | 6_2:-58653759 | Msa0921390:CDS |
| ACATACTTCTCTACTAATGA+AGG | 0.534955 | 6_2:+58653375 | None:intergenic |
| CGGATTAGCTTTAAACTTTG+GGG | 0.537278 | 6_2:-58652600 | Msa0921390:three_prime_UTR |
| TAGATTACCCAGATGCTTCG+TGG | 0.537317 | 6_2:+58655699 | None:intergenic |
| GGAGTGACTGAATTCAAAGA+AGG | 0.538722 | 6_2:-58655003 | Msa0921390:CDS |
| TTAAGTGCATTACTGATGGT+GGG | 0.539038 | 6_2:-58653758 | Msa0921390:CDS |
| CTGTTTCTGTGTAAGAAGAA+AGG | 0.545601 | 6_2:+58657057 | None:intergenic |
| TTAAAAGGATCTTTATTCGG+AGG | 0.548166 | 6_2:-58653420 | Msa0921390:CDS |
| GCTTTCAATCTCATGAAAGA+AGG | 0.550205 | 6_2:-58652707 | Msa0921390:CDS |
| GTTATTAAGTGCATTACTGA+TGG | 0.552179 | 6_2:-58653762 | Msa0921390:CDS |
| AAAATATGCATTCTTAGCTG+TGG | 0.552327 | 6_2:-58654736 | Msa0921390:CDS |
| CCTATTCAATAGGTTGCGCA+AGG | 0.566472 | 6_2:-58654118 | Msa0921390:intron |
| GTTGTTGTTGGTAGTAGTGG+TGG | 0.567116 | 6_2:+58657125 | None:intergenic |
| GTTGTTGGTAGTAGTGGTGG+TGG | 0.567554 | 6_2:+58657128 | None:intergenic |
| TGATGATGATGATGCCATGA+TGG | 0.570891 | 6_2:+58657034 | None:intergenic |
| CTCCATCTAGGAGTGGTAGG+TGG | 0.571436 | 6_2:+58657158 | None:intergenic |
| CATCTAGGAGTGGTAGGTGG+AGG | 0.572927 | 6_2:+58657161 | None:intergenic |
| GCTTGTTTCTTTCATGAAAG+GGG | 0.572998 | 6_2:-58652639 | Msa0921390:three_prime_UTR |
| TTACACAGAAACAGCCATCA+TGG | 0.573259 | 6_2:-58657048 | Msa0921390:exon |
| GAGTGACTGAATTCAAAGAA+GGG | 0.576891 | 6_2:-58655002 | Msa0921390:CDS |
| GTACAAAGAACCTATCGTGC+AGG | 0.585896 | 6_2:-58653883 | Msa0921390:intron |
| AGTAGCATGGGGAGCTGGAG+AGG | 0.586768 | 6_2:-58656866 | Msa0921390:CDS |
| TGGAGAGGCATTGGTGATGG+AGG | 0.587850 | 6_2:-58656851 | Msa0921390:CDS |
| TAAGTGCATTACTGATGGTG+GGG | 0.591863 | 6_2:-58653757 | Msa0921390:CDS |
| TCAGAAATTAAATTTCGTAA+GGG | 0.593662 | 6_2:-58652510 | Msa0921390:three_prime_UTR |
| AAGCCTGTTTATCATTATTG+CGG | 0.594521 | 6_2:-58654835 | Msa0921390:CDS |
| TTCCTCCATCTAGGAGTGGT+AGG | 0.597890 | 6_2:+58657155 | None:intergenic |
| CCTCAAGTCATAACCTGCAA+AGG | 0.598569 | 6_2:-58657008 | Msa0921390:intron |
| ACCTTAATCCTAATCTCCAA+TGG | 0.599263 | 6_2:+58656805 | None:intergenic |
| AATGTTGCCGATGTGACAAA+AGG | 0.599429 | 6_2:-58654358 | Msa0921390:CDS |
| ATAGGTTCTTTGTACAAACT+CGG | 0.599694 | 6_2:+58653891 | None:intergenic |
| CTAATCTCCAATGGTTGAGG+AGG | 0.600166 | 6_2:+58656814 | None:intergenic |
| CTATTCAATAGGTTGCGCAA+GGG | 0.602243 | 6_2:-58654117 | Msa0921390:intron |
| CAATAGGTCTAGGTGCAGCA+TGG | 0.604039 | 6_2:-58654381 | Msa0921390:intron |
| CTATGAAAACTGTTAACACA+TGG | 0.605315 | 6_2:+58654977 | None:intergenic |
| TATTTGGCCACGAAGCATCT+GGG | 0.608176 | 6_2:-58655706 | Msa0921390:intron |
| TATTCAATAGGTTGCGCAAG+GGG | 0.610569 | 6_2:-58654116 | Msa0921390:intron |
| TTTGCAGGTTATGACTTGAG+GGG | 0.620062 | 6_2:+58657010 | None:intergenic |
| AAAGGAATTATCTTGGCATG+TGG | 0.620375 | 6_2:+58652663 | None:intergenic |
| CGATGTGACAAAAGGATCCA+CGG | 0.623181 | 6_2:-58654350 | Msa0921390:CDS |
| GCGCAAGGGGCCAAACTAAG+GGG | 0.624386 | 6_2:-58654103 | Msa0921390:CDS |
| GGGGAGAATTGCTGAAGTAG+CGG | 0.634808 | 6_2:-58652620 | Msa0921390:three_prime_UTR |
| ATCACTACGACAAAGAGAGG+TGG | 0.635585 | 6_2:+58656777 | None:intergenic |
| TCATGAAAGAAACAAGCCAA+AGG | 0.640150 | 6_2:+58652645 | None:intergenic |
| AAGATCACTACGACAAAGAG+AGG | 0.642771 | 6_2:+58656774 | None:intergenic |
| TAGGTTCCTCCATCTAGGAG+TGG | 0.645649 | 6_2:+58657151 | None:intergenic |
| AGTAGAGAAGTATGTCAACA+AGG | 0.658436 | 6_2:-58653367 | Msa0921390:intron |
| CACCTACCACTCCTAGATGG+AGG | 0.660876 | 6_2:-58657157 | Msa0921390:five_prime_UTR |
| AGTGACTGAATTCAAAGAAG+GGG | 0.664041 | 6_2:-58655001 | Msa0921390:CDS |
| AATATGCATTCTTAGCTGTG+GGG | 0.673736 | 6_2:-58654734 | Msa0921390:CDS |
| GTTGGTGTAGAAACAAAATG+TGG | 0.675898 | 6_2:-58652411 | Msa0921390:three_prime_UTR |
| CAAACAGCTGCAGTAGCATG+GGG | 0.680428 | 6_2:-58656877 | Msa0921390:intron |
| GCTTCGTGGCCAAATATGCG+AGG | 0.691472 | 6_2:+58655713 | None:intergenic |
| TTGGTGTAGAAACAAAATGT+GGG | 0.728639 | 6_2:-58652410 | Msa0921390:three_prime_UTR |
| AAGACCAAATATAACCACCG+TGG | 0.768180 | 6_2:+58654333 | None:intergenic |
| TGTGACAAAAGGATCCACGG+TGG | 0.840241 | 6_2:-58654347 | Msa0921390:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | GATATTGAAAATAATAAAAT+TGG | + | chr6_2:58653064-58653083 | None:intergenic | 10.0% |
| !! | AAAAATACTAAAAAGGAAAT+GGG | + | chr6_2:58652551-58652570 | None:intergenic | 15.0% |
| !! | AAAAAATACTAAAAAGGAAA+TGG | + | chr6_2:58652552-58652571 | None:intergenic | 15.0% |
| !! | TGATTTACTAATATATATCA+AGG | + | chr6_2:58652855-58652874 | None:intergenic | 15.0% |
| !! | AAAAATATTTACATTGAACA+TGG | + | chr6_2:58652882-58652901 | None:intergenic | 15.0% |
| !!! | GTTTAATTTTGATACATTAT+CGG | + | chr6_2:58653005-58653024 | None:intergenic | 15.0% |
| !! | TATCTATAGAAAACAAAAAA+GGG | + | chr6_2:58653293-58653312 | None:intergenic | 15.0% |
| !! | ATATCTATAGAAAACAAAAA+AGG | + | chr6_2:58653294-58653313 | None:intergenic | 15.0% |
| !! | ATACTGAATATAAAACTAAA+TGG | - | chr6_2:58653743-58653762 | Msa0921390:CDS | 15.0% |
| !! | TATAGTTAATAATAAACACT+TGG | + | chr6_2:58654833-58654852 | None:intergenic | 15.0% |
| !! | AAAATAAATTCAGAGTAATT+TGG | + | chr6_2:58655512-58655531 | None:intergenic | 15.0% |
| !!! | TTTATTTTTAAACCTTAGAA+CGG | - | chr6_2:58655524-58655543 | Msa0921390:intron | 15.0% |
| !! | TTATATTAAAAATTAAGGGT+AGG | + | chr6_2:58656588-58656607 | None:intergenic | 15.0% |
| !!! | TATGAAAGAGATTTTATTTT+TGG | - | chr6_2:58656611-58656630 | Msa0921390:intron | 15.0% |
| !! | ATATATTGGAAAAATAACAA+GGG | + | chr6_2:58656987-58657006 | None:intergenic | 15.0% |
| !! | AATATATTGGAAAAATAACA+AGG | + | chr6_2:58656988-58657007 | None:intergenic | 15.0% |
| !!! | TAAAAAGAAGTTTAAGACAA+TGG | + | chr6_2:58652439-58652458 | None:intergenic | 20.0% |
| !! | CATACATATCAAAACAAATA+TGG | + | chr6_2:58652585-58652604 | None:intergenic | 20.0% |
| !! | TTTGTTTGTTTCATAAACAA+TGG | + | chr6_2:58652629-58652648 | None:intergenic | 20.0% |
| !!! | TTTCTAAAGTCAAACATTAA+TGG | - | chr6_2:58652963-58652982 | Msa0921390:intron | 20.0% |
| !! | ATCTATAGAAAACAACTAAT+TGG | + | chr6_2:58653095-58653114 | None:intergenic | 20.0% |
| !!! | TTGTTTTCTATAGATATTGT+CGG | - | chr6_2:58653297-58653316 | Msa0921390:intron | 20.0% |
| !!! | ATTTTGTTTGACATGATTAA+TGG | - | chr6_2:58653408-58653427 | Msa0921390:CDS | 20.0% |
| !! | TCGATAATAATTTGAGAAAA+TGG | + | chr6_2:58653522-58653541 | None:intergenic | 20.0% |
| !! | AAGAATAAATATTCATTAGC+AGG | + | chr6_2:58653697-58653716 | None:intergenic | 20.0% |
| !! | TCTTCAAATAAAACAACTAA+AGG | + | chr6_2:58653890-58653909 | None:intergenic | 20.0% |
| !! | TTTAACCAAATTATTGCAAA+AGG | - | chr6_2:58654427-58654446 | Msa0921390:intron | 20.0% |
| !!! | AACTAATATTTGTCAAGTTT+TGG | - | chr6_2:58654605-58654624 | Msa0921390:intron | 20.0% |
| !!! | ACTAATATTTGTCAAGTTTT+GGG | - | chr6_2:58654606-58654625 | Msa0921390:intron | 20.0% |
| !! | CTATAAGAAATTGAAACATA+AGG | - | chr6_2:58654848-58654867 | Msa0921390:CDS | 20.0% |
| !! | AAATTGAAACATAAGGTTTA+AGG | - | chr6_2:58654855-58654874 | Msa0921390:CDS | 20.0% |
| !!! | TACTAGTTAGTTATTTTCAA+GGG | - | chr6_2:58655017-58655036 | Msa0921390:CDS | 20.0% |
| !! | AGAATATAAGATAGATATAG+TGG | + | chr6_2:58655251-58655270 | None:intergenic | 20.0% |
| !!! | ACTTTAAAAGGATCTTTATT+CGG | - | chr6_2:58656099-58656118 | Msa0921390:intron | 20.0% |
| !! | ATAAAATCATGCTTAGATAA+AGG | + | chr6_2:58656206-58656225 | None:intergenic | 20.0% |
| !!! | AGAGATTTTATTTTTGGATA+AGG | - | chr6_2:58656617-58656636 | Msa0921390:intron | 20.0% |
| !! | GATATGATAAATAAATATGC+AGG | - | chr6_2:58656736-58656755 | Msa0921390:intron | 20.0% |
| !! | TATATTGGAAAAATAACAAG+GGG | + | chr6_2:58656986-58657005 | None:intergenic | 20.0% |
| !! | TCAGAAATTAAATTTCGTAA+GGG | - | chr6_2:58657012-58657031 | Msa0921390:CDS | 20.0% |
| !!! | AACAGTAAAAAAAAGTATGA+GGG | + | chr6_2:58657094-58657113 | None:intergenic | 20.0% |
| !! | ATTCCCATTCAAAATATAAT+CGG | - | chr6_2:58657172-58657191 | Msa0921390:five_prime_UTR | 20.0% |
| !! | TAAATTGTTGTTGTTGTTGT+TGG | + | chr6_2:58652412-58652431 | None:intergenic | 25.0% |
| !!! | TTAGTTGTTTTCTATAGATG+AGG | - | chr6_2:58653096-58653115 | Msa0921390:intron | 25.0% |
| !!! | TAGTTGTTTTCTATAGATGA+GGG | - | chr6_2:58653097-58653116 | Msa0921390:intron | 25.0% |
| !! | TGTTTTCTATAGATATTGTC+GGG | - | chr6_2:58653298-58653317 | Msa0921390:intron | 25.0% |
| ! | ATGTCAAACAAAATGTTGAT+TGG | + | chr6_2:58653402-58653421 | None:intergenic | 25.0% |
| ! | TCTTAAGAACTGTAATATGT+AGG | + | chr6_2:58653619-58653638 | None:intergenic | 25.0% |
| ! | AATAAAAGCTAATGAAAGCT+TGG | - | chr6_2:58653663-58653682 | Msa0921390:intron | 25.0% |
| ! | ATGGAATTACATCTAACATA+AGG | - | chr6_2:58653762-58653781 | Msa0921390:CDS | 25.0% |
| !! | TCATTTTAAACTCGGTAAAT+CGG | + | chr6_2:58654108-58654127 | None:intergenic | 25.0% |
| !! | GATGATTCTCATTTTAAACT+CGG | + | chr6_2:58654116-58654135 | None:intergenic | 25.0% |
| ! | AATTATATTGTGAACCTTGA+TGG | + | chr6_2:58654381-58654400 | None:intergenic | 25.0% |
| !! | TTACACCTTTTGCAATAATT+TGG | + | chr6_2:58654435-58654454 | None:intergenic | 25.0% |
| ! | ACTATATTCAACATCTACTA+TGG | + | chr6_2:58654462-58654481 | None:intergenic | 25.0% |
| ! | AGATGTTGAATATAGTGTAA+TGG | - | chr6_2:58654466-58654485 | Msa0921390:intron | 25.0% |
| ! | AAGACAAGATTTACAGTAAA+AGG | - | chr6_2:58654663-58654682 | Msa0921390:intron | 25.0% |
| ! | AGACAAGATTTACAGTAAAA+GGG | - | chr6_2:58654664-58654683 | Msa0921390:intron | 25.0% |
| ! | AATAACTAACTAGTACTAGA+AGG | + | chr6_2:58655012-58655031 | None:intergenic | 25.0% |
| !!! | GTACTAGTTAGTTATTTTCA+AGG | - | chr6_2:58655016-58655035 | Msa0921390:CDS | 25.0% |
| !!! | CTCAAAGTTTTGTTTCTAAA+TGG | - | chr6_2:58655047-58655066 | Msa0921390:intron | 25.0% |
| ! | CAACTTTGCATTATAACAAT+AGG | - | chr6_2:58655125-58655144 | Msa0921390:intron | 25.0% |
| !! | TAATTTTCTTTTTGCTCTTG+AGG | - | chr6_2:58655329-58655348 | Msa0921390:intron | 25.0% |
| ! | ATTCATCTATTAAGATCATG+AGG | + | chr6_2:58655356-58655375 | None:intergenic | 25.0% |
| ! | TATAACAAAACATGACTTGA+GGG | + | chr6_2:58655873-58655892 | None:intergenic | 25.0% |
| !! | ATTAAGTTGTTTATCCAAAC+AGG | - | chr6_2:58655950-58655969 | Msa0921390:intron | 25.0% |
| !! | TTAAGTTGTTTATCCAAACA+GGG | - | chr6_2:58655951-58655970 | Msa0921390:intron | 25.0% |
| ! | AGTATGTTACAACAAGAAAA+GGG | + | chr6_2:58656283-58656302 | None:intergenic | 25.0% |
| ! | AAGTATGTTACAACAAGAAA+AGG | + | chr6_2:58656284-58656303 | None:intergenic | 25.0% |
| ! | ATGTCTTGCTTAAAAGTTAT+TGG | + | chr6_2:58656313-58656332 | None:intergenic | 25.0% |
| !! | ACTTTTAAGCAAGACATTTT+AGG | - | chr6_2:58656316-58656335 | Msa0921390:intron | 25.0% |
| !!! | TTTTGTTGTCTAAGTTATCA+TGG | - | chr6_2:58656383-58656402 | Msa0921390:intron | 25.0% |
| ! | TATTGATATTGTCTTATCGT+CGG | + | chr6_2:58656416-58656435 | None:intergenic | 25.0% |
| ! | ACGATAAGACAATATCAATA+GGG | - | chr6_2:58656416-58656435 | Msa0921390:intron | 25.0% |
| !!! | AATTTCTGAGACGAATATAT+TGG | + | chr6_2:58657001-58657020 | None:intergenic | 25.0% |
| ! | CTCAGAAATTAAATTTCGTA+AGG | - | chr6_2:58657011-58657030 | Msa0921390:CDS | 25.0% |
| !! | ACAGTAAAAAAAAGTATGAG+GGG | + | chr6_2:58657093-58657112 | None:intergenic | 25.0% |
| !! | CAACAGTAAAAAAAAGTATG+AGG | + | chr6_2:58657095-58657114 | None:intergenic | 25.0% |
| !!! | CTCATACTTTTTTTTACTGT+TGG | - | chr6_2:58657093-58657112 | Msa0921390:five_prime_UTR | 25.0% |
| TTGGAGACAAGAAGTAAAAA+GGG | + | chr6_2:58653045-58653064 | None:intergenic | 30.0% | |
| ATTGGAGACAAGAAGTAAAA+AGG | + | chr6_2:58653046-58653065 | None:intergenic | 30.0% | |
| !! | AGTTGTTTTCTATAGATGAG+GGG | - | chr6_2:58653098-58653117 | Msa0921390:intron | 30.0% |
| TATCCAATTACATCTCACAA+AGG | + | chr6_2:58653343-58653362 | None:intergenic | 30.0% | |
| !! | CAGTTTTAATCTGGAAGTAT+TGG | + | chr6_2:58653448-58653467 | None:intergenic | 30.0% |
| !! | CATAAGGTGTTTTTATATGC+AGG | - | chr6_2:58653778-58653797 | Msa0921390:intron | 30.0% |
| TACACTTAATGTTCTACTGT+TGG | - | chr6_2:58653844-58653863 | Msa0921390:intron | 30.0% | |
| CACTACAATAGATGAATCAT+TGG | - | chr6_2:58654053-58654072 | Msa0921390:CDS | 30.0% | |
| TTACGTATATGCATGAGAAT+GGG | - | chr6_2:58654266-58654285 | Msa0921390:intron | 30.0% | |
| !! | ATATAGTGTAATGGTTTTGC+AGG | - | chr6_2:58654475-58654494 | Msa0921390:intron | 30.0% |
| CTATGAAAACTGTTAACACA+TGG | + | chr6_2:58654548-58654567 | None:intergenic | 30.0% | |
| ! | CATGTGTTAACAGTTTTCAT+AGG | - | chr6_2:58654546-58654565 | Msa0921390:intron | 30.0% |
| !!! | TATTTGTCAAGTTTTGGGAT+TGG | - | chr6_2:58654611-58654630 | Msa0921390:intron | 30.0% |
| AAGCCTGTTTATCATTATTG+CGG | - | chr6_2:58654687-58654706 | Msa0921390:intron | 30.0% | |
| ! | AGAATGCATATTTTCTCAAG+AGG | + | chr6_2:58654780-58654799 | None:intergenic | 30.0% |
| AAAATATGCATTCTTAGCTG+TGG | - | chr6_2:58654786-58654805 | Msa0921390:CDS | 30.0% | |
| AAATATGCATTCTTAGCTGT+GGG | - | chr6_2:58654787-58654806 | Msa0921390:CDS | 30.0% | |
| !!! | AGTTTTGTTTCTAAATGGAC+AGG | - | chr6_2:58655052-58655071 | Msa0921390:intron | 30.0% |
| TGCATTATAACAATAGGTCT+AGG | - | chr6_2:58655131-58655150 | Msa0921390:intron | 30.0% | |
| ATAGGTTCTTTGTACAAACT+CGG | + | chr6_2:58655634-58655653 | None:intergenic | 30.0% | |
| ! | TGAAATTTTCAACGCACAAA+TGG | + | chr6_2:58655739-58655758 | None:intergenic | 30.0% |
| ATTTGTGCGTTGAAAATTTC+AGG | - | chr6_2:58655738-58655757 | Msa0921390:intron | 30.0% | |
| GTTATTAAGTGCATTACTGA+TGG | - | chr6_2:58655760-58655779 | Msa0921390:intron | 30.0% | |
| CTATAACAAAACATGACTTG+AGG | + | chr6_2:58655874-58655893 | None:intergenic | 30.0% | |
| ! | TATCTTTCCTTGTTTACAAC+AGG | - | chr6_2:58655993-58656012 | Msa0921390:intron | 30.0% |
| ! | ATCTTTCCTTGTTTACAACA+GGG | - | chr6_2:58655994-58656013 | Msa0921390:intron | 30.0% |
| TTAAAAGGATCTTTATTCGG+AGG | - | chr6_2:58656102-58656121 | Msa0921390:intron | 30.0% | |
| ! | AATGAAGGAAGATCAGTTTT+AGG | + | chr6_2:58656135-58656154 | None:intergenic | 30.0% |
| ACATACTTCTCTACTAATGA+AGG | + | chr6_2:58656150-58656169 | None:intergenic | 30.0% | |
| GACGATAAGACAATATCAAT+AGG | - | chr6_2:58656415-58656434 | Msa0921390:intron | 30.0% | |
| CGATAAGACAATATCAATAG+GGG | - | chr6_2:58656417-58656436 | Msa0921390:intron | 30.0% | |
| ! | TTCGAAACTGAATCTCTTTT+GGG | - | chr6_2:58656491-58656510 | Msa0921390:intron | 30.0% |
| CTAAGGAATAAAAATCCACA+AGG | + | chr6_2:58656680-58656699 | None:intergenic | 30.0% | |
| ! | CTTGTGGATTTTTATTCCTT+AGG | - | chr6_2:58656678-58656697 | Msa0921390:intron | 30.0% |
| TGCTTAATAAATACTGCCTA+AGG | + | chr6_2:58656697-58656716 | None:intergenic | 30.0% | |
| ! | CAGTAAAAAAAAGTATGAGG+GGG | + | chr6_2:58657092-58657111 | None:intergenic | 30.0% |
| TTGGTGTAGAAACAAAATGT+GGG | - | chr6_2:58657112-58657131 | Msa0921390:five_prime_UTR | 30.0% | |
| !! | CTGTTTCTGTGTAAGAAGAA+AGG | + | chr6_2:58652468-58652487 | None:intergenic | 35.0% |
| ACCATTGGAGATTAGGATTA+AGG | - | chr6_2:58652716-58652735 | Msa0921390:CDS | 35.0% | |
| ACCTTAATCCTAATCTCCAA+TGG | + | chr6_2:58652720-58652739 | None:intergenic | 35.0% | |
| !!! | TTACCCTGTTTTTACACAAG+AGG | + | chr6_2:58653194-58653213 | None:intergenic | 35.0% |
| TCTTGTGTAAAAACAGGGTA+AGG | - | chr6_2:58653193-58653212 | Msa0921390:intron | 35.0% | |
| TTCCAGATTAAAACTGTGTC+TGG | - | chr6_2:58653452-58653471 | Msa0921390:intron | 35.0% | |
| ACTGAAGTAACAACATGTGT+CGG | + | chr6_2:58653495-58653514 | None:intergenic | 35.0% | |
| AGAGTGACATTGATCAACTA+TGG | - | chr6_2:58654000-58654019 | Msa0921390:intron | 35.0% | |
| GAGTGACATTGATCAACTAT+GGG | - | chr6_2:58654001-58654020 | Msa0921390:intron | 35.0% | |
| ACATTGATCAACTATGGGAA+TGG | - | chr6_2:58654006-58654025 | Msa0921390:intron | 35.0% | |
| !!! | TGTGTGATATTTTGACCGTA+AGG | + | chr6_2:58654035-58654054 | None:intergenic | 35.0% |
| TCGGTAAATCGGATTTCAAA+CGG | + | chr6_2:58654097-58654116 | None:intergenic | 35.0% | |
| CAATCCAGGTCCATAAAAAA+TGG | - | chr6_2:58654198-58654217 | Msa0921390:intron | 35.0% | |
| CAGGTCCATAAAAAATGGTA+GGG | - | chr6_2:58654203-58654222 | Msa0921390:intron | 35.0% | |
| GTTACGTATATGCATGAGAA+TGG | - | chr6_2:58654265-58654284 | Msa0921390:intron | 35.0% | |
| AATTTACAGCTATGGCTAGT+TGG | + | chr6_2:58654302-58654321 | None:intergenic | 35.0% | |
| ! | TTGATGGTACAGCAAAATAC+AGG | + | chr6_2:58654365-58654384 | None:intergenic | 35.0% |
| !! | TGTATTTTGCTGTACCATCA+AGG | - | chr6_2:58654364-58654383 | Msa0921390:CDS | 35.0% |
| AGTCATGTCTATGTGAATTG+CGG | + | chr6_2:58654408-58654427 | None:intergenic | 35.0% | |
| GAGTGACTGAATTCAAAGAA+GGG | - | chr6_2:58654520-58654539 | Msa0921390:intron | 35.0% | |
| AGTGACTGAATTCAAAGAAG+GGG | - | chr6_2:58654521-58654540 | Msa0921390:intron | 35.0% | |
| !!! | AGTTTTGGGATTGGAAAGAA+AGG | - | chr6_2:58654620-58654639 | Msa0921390:intron | 35.0% |
| !!! | GTTTTGGGATTGGAAAGAAA+GGG | - | chr6_2:58654621-58654640 | Msa0921390:intron | 35.0% |
| ACACCGCAATAATGATAAAC+AGG | + | chr6_2:58654693-58654712 | None:intergenic | 35.0% | |
| GAATACACAGTTGTTCATTC+TGG | - | chr6_2:58654726-58654745 | Msa0921390:CDS | 35.0% | |
| !! | ATTTTCTCAAGAGGTACATG+AGG | + | chr6_2:58654771-58654790 | None:intergenic | 35.0% |
| AATATGCATTCTTAGCTGTG+GGG | - | chr6_2:58654788-58654807 | Msa0921390:CDS | 35.0% | |
| ACATAAAGTGACACTCAGTA+TGG | + | chr6_2:58654902-58654921 | None:intergenic | 35.0% | |
| ATTACTCAGAAGTAGTCCTA+CGG | + | chr6_2:58654943-58654962 | None:intergenic | 35.0% | |
| AACTAACTAGTACTAGAAGG+TGG | + | chr6_2:58655009-58655028 | None:intergenic | 35.0% | |
| !! | ATATTTGGTCTTGGAACTGT+TGG | - | chr6_2:58655200-58655219 | Msa0921390:intron | 35.0% |
| TTTCTGTAAGTCCAAGTACT+CGG | - | chr6_2:58655225-58655244 | Msa0921390:intron | 35.0% | |
| ! | GAATTCTCTTTGTGCTTTTG+CGG | + | chr6_2:58655282-58655301 | None:intergenic | 35.0% |
| TGAATAGGAGAGTCATGATT+TGG | + | chr6_2:58655392-58655411 | None:intergenic | 35.0% | |
| TCATGACTCTCCTATTCAAT+AGG | - | chr6_2:58655394-58655413 | Msa0921390:intron | 35.0% | |
| ! | AATCCACAGAAGTGTGAAAA+TGG | - | chr6_2:58655470-58655489 | Msa0921390:intron | 35.0% |
| ! | TTACCATTTTCACACTTCTG+TGG | + | chr6_2:58655476-58655495 | None:intergenic | 35.0% |
| ! | TACCACACAGCTAAATCTTT+TGG | - | chr6_2:58655589-58655608 | Msa0921390:intron | 35.0% |
| ! | ACCACACAGCTAAATCTTTT+GGG | - | chr6_2:58655590-58655609 | Msa0921390:intron | 35.0% |
| TGCAATTGTGCATGTGAAAT+TGG | + | chr6_2:58655692-58655711 | None:intergenic | 35.0% | |
| ATTAAGTGCATTACTGATGG+TGG | - | chr6_2:58655763-58655782 | Msa0921390:intron | 35.0% | |
| TTAAGTGCATTACTGATGGT+GGG | - | chr6_2:58655764-58655783 | Msa0921390:intron | 35.0% | |
| !! | GATTTCTGTTTTGAATGTGC+AGG | - | chr6_2:58655790-58655809 | Msa0921390:intron | 35.0% |
| ! | TCTTTCCTTGTTTACAACAG+GGG | - | chr6_2:58655995-58656014 | Msa0921390:intron | 35.0% |
| !!! | CTTTTAAAGTTCTTCCTGTC+AGG | + | chr6_2:58656089-58656108 | None:intergenic | 35.0% |
| CTGACAGGAAGAACTTTAAA+AGG | - | chr6_2:58656087-58656106 | Msa0921390:intron | 35.0% | |
| ! | AGTAGAGAAGTATGTCAACA+AGG | - | chr6_2:58656155-58656174 | Msa0921390:intron | 35.0% |
| GTCTAAGTTATCATGGTCAT+TGG | - | chr6_2:58656390-58656409 | Msa0921390:intron | 35.0% | |
| AGAGATTCAGTTTCGAACAT+TGG | + | chr6_2:58656488-58656507 | None:intergenic | 35.0% | |
| ! | GTTCGAAACTGAATCTCTTT+TGG | - | chr6_2:58656490-58656509 | Msa0921390:intron | 35.0% |
| GTGTTATGTAGTCATCAATC+TGG | + | chr6_2:58656766-58656785 | None:intergenic | 35.0% | |
| GCTTTCAATCTCATGAAAGA+AGG | - | chr6_2:58656815-58656834 | Msa0921390:CDS | 35.0% | |
| AAAGGAATTATCTTGGCATG+TGG | + | chr6_2:58656862-58656881 | None:intergenic | 35.0% | |
| ACATGCCAAGATAATTCCTT+TGG | - | chr6_2:58656861-58656880 | Msa0921390:CDS | 35.0% | |
| ACAAGCCAAAGGAATTATCT+TGG | + | chr6_2:58656869-58656888 | None:intergenic | 35.0% | |
| TCATGAAAGAAACAAGCCAA+AGG | + | chr6_2:58656880-58656899 | None:intergenic | 35.0% | |
| !! | TGGCTTGTTTCTTTCATGAA+AGG | - | chr6_2:58656881-58656900 | Msa0921390:intron | 35.0% |
| ! | GGCTTGTTTCTTTCATGAAA+GGG | - | chr6_2:58656882-58656901 | Msa0921390:intron | 35.0% |
| ! | GCTTGTTTCTTTCATGAAAG+GGG | - | chr6_2:58656883-58656902 | Msa0921390:intron | 35.0% |
| !! | AGCGGATTAGCTTTAAACTT+TGG | - | chr6_2:58656920-58656939 | Msa0921390:intron | 35.0% |
| !! | GCGGATTAGCTTTAAACTTT+GGG | - | chr6_2:58656921-58656940 | Msa0921390:intron | 35.0% |
| !! | CGGATTAGCTTTAAACTTTG+GGG | - | chr6_2:58656922-58656941 | Msa0921390:intron | 35.0% |
| !! | AGAGAGCACCAAAAAATAGT+GGG | + | chr6_2:58656962-58656981 | None:intergenic | 35.0% |
| !! | AAGAGAGCACCAAAAAATAG+TGG | + | chr6_2:58656963-58656982 | None:intergenic | 35.0% |
| ! | TGTGTTTACGAGTTGGATTA+TGG | - | chr6_2:58657035-58657054 | Msa0921390:exon | 35.0% |
| GTTGGTGTAGAAACAAAATG+TGG | - | chr6_2:58657111-58657130 | Msa0921390:five_prime_UTR | 35.0% | |
| CAATCAACACACAGTTATGA+AGG | + | chr6_2:58657152-58657171 | None:intergenic | 35.0% | |
| !! | GTTGTTGTTGTTGGTAGTAG+TGG | + | chr6_2:58652403-58652422 | None:intergenic | 40.0% |
| TTACACAGAAACAGCCATCA+TGG | - | chr6_2:58652474-58652493 | Msa0921390:three_prime_UTR | 40.0% | |
| ! | TGATGATGATGATGCCATGA+TGG | + | chr6_2:58652491-58652510 | None:intergenic | 40.0% |
| TTTGCAGGTTATGACTTGAG+GGG | + | chr6_2:58652515-58652534 | None:intergenic | 40.0% | |
| CTTTGCAGGTTATGACTTGA+GGG | + | chr6_2:58652516-58652535 | None:intergenic | 40.0% | |
| ATCCTAATCTCCAATGGTTG+AGG | + | chr6_2:58652714-58652733 | None:intergenic | 40.0% | |
| AAGATCACTACGACAAAGAG+AGG | + | chr6_2:58652751-58652770 | None:intergenic | 40.0% | |
| TCGTAGTGATCTTTCTGCTT+GGG | - | chr6_2:58652758-58652777 | Msa0921390:CDS | 40.0% | |
| AGACAAGAAGTAAAAAGGGC+AGG | + | chr6_2:58653041-58653060 | None:intergenic | 40.0% | |
| GTTGTTGTCATGTGACTGTA+AGG | - | chr6_2:58653143-58653162 | Msa0921390:intron | 40.0% | |
| ACAGCCTCTTGTGTAAAAAC+AGG | - | chr6_2:58653187-58653206 | Msa0921390:intron | 40.0% | |
| CAGCCTCTTGTGTAAAAACA+GGG | - | chr6_2:58653188-58653207 | Msa0921390:intron | 40.0% | |
| CGTACAATACACCAAATGGT+CGG | - | chr6_2:58653219-58653238 | Msa0921390:intron | 40.0% | |
| GAAAACAAAAAAGGGCAACC+CGG | + | chr6_2:58653285-58653304 | None:intergenic | 40.0% | |
| TCGGGTCATCATACAAGAAT+TGG | - | chr6_2:58653316-58653335 | Msa0921390:intron | 40.0% | |
| GGTCCTTTGTGAGATGTAAT+TGG | - | chr6_2:58653337-58653356 | Msa0921390:intron | 40.0% | |
| TGAAGTAACAACATGTGTCG+GGG | + | chr6_2:58653493-58653512 | None:intergenic | 40.0% | |
| CTGAAGTAACAACATGTGTC+GGG | + | chr6_2:58653494-58653513 | None:intergenic | 40.0% | |
| GCCATATTTCCTCGCATATT+TGG | - | chr6_2:58653800-58653819 | Msa0921390:intron | 40.0% | |
| GCCAAATATGCGAGGAAATA+TGG | + | chr6_2:58653804-58653823 | None:intergenic | 40.0% | |
| ! | CTATGGGAATGGATTCCTTA+CGG | - | chr6_2:58654017-58654036 | Msa0921390:intron | 40.0% |
| CGGTAAATCGGATTTCAAAC+GGG | + | chr6_2:58654096-58654115 | None:intergenic | 40.0% | |
| ATTTACTGCAGATAGTAGGC+TGG | + | chr6_2:58654157-58654176 | None:intergenic | 40.0% | |
| ACGCATTTACTGCAGATAGT+AGG | + | chr6_2:58654161-58654180 | None:intergenic | 40.0% | |
| ATGCGTGATACTATGACTGA+AGG | - | chr6_2:58654175-58654194 | Msa0921390:intron | 40.0% | |
| !!! | CCTACCATTTTTTATGGACC+TGG | + | chr6_2:58654205-58654224 | None:intergenic | 40.0% |
| CCAGGTCCATAAAAAATGGT+AGG | - | chr6_2:58654202-58654221 | Msa0921390:intron | 40.0% | |
| !!! | CTGCACCCTACCATTTTTTA+TGG | + | chr6_2:58654211-58654230 | None:intergenic | 40.0% |
| CTAGCCATAGCTGTAAATTG+CGG | - | chr6_2:58654303-58654322 | Msa0921390:intron | 40.0% | |
| GGAGTGACTGAATTCAAAGA+AGG | - | chr6_2:58654519-58654538 | Msa0921390:intron | 40.0% | |
| AGTATGGACGAAGAGATTAC+TGG | + | chr6_2:58654886-58654905 | None:intergenic | 40.0% | |
| TTACTCAGAAGTAGTCCTAC+GGG | + | chr6_2:58654942-58654961 | None:intergenic | 40.0% | |
| TAACTAGTACTAGAAGGTGG+TGG | + | chr6_2:58655006-58655025 | None:intergenic | 40.0% | |
| AATGTTGCCGATGTGACAAA+AGG | - | chr6_2:58655164-58655183 | Msa0921390:intron | 40.0% | |
| AAGACCAAATATAACCACCG+TGG | + | chr6_2:58655192-58655211 | None:intergenic | 40.0% | |
| ACGGTGGTTATATTTGGTCT+TGG | - | chr6_2:58655191-58655210 | Msa0921390:intron | 40.0% | |
| GAGTACTTGGACTTACAGAA+AGG | + | chr6_2:58655226-58655245 | None:intergenic | 40.0% | |
| CTATTCAATAGGTTGCGCAA+GGG | - | chr6_2:58655405-58655424 | Msa0921390:intron | 40.0% | |
| TATTCAATAGGTTGCGCAAG+GGG | - | chr6_2:58655406-58655425 | Msa0921390:intron | 40.0% | |
| ! | AGGGGTGCATCTAGAATAAT+TGG | - | chr6_2:58655437-58655456 | Msa0921390:intron | 40.0% |
| AGAGATTATGAGCCGTTCTA+AGG | + | chr6_2:58655539-58655558 | None:intergenic | 40.0% | |
| TCCCAAAAGATTTAGCTGTG+TGG | + | chr6_2:58655594-58655613 | None:intergenic | 40.0% | |
| ! | TAAGTGCATTACTGATGGTG+GGG | - | chr6_2:58655765-58655784 | Msa0921390:intron | 40.0% |
| AATTCAAGTCAGACCCTGTT+TGG | + | chr6_2:58655967-58655986 | None:intergenic | 40.0% | |
| ! | CATTATGGACTATTCCTGAC+AGG | - | chr6_2:58656072-58656091 | Msa0921390:intron | 40.0% |
| AAGGATCTTTATTCGGAGGA+TGG | - | chr6_2:58656106-58656125 | Msa0921390:intron | 40.0% | |
| GACAATATCAATAGGGGTTG+AGG | - | chr6_2:58656423-58656442 | Msa0921390:intron | 40.0% | |
| GATTCAGTTTCGAACATTGG+TGG | + | chr6_2:58656485-58656504 | None:intergenic | 40.0% | |
| ACATCTATGTGAGACATCGT+CGG | + | chr6_2:58656538-58656557 | None:intergenic | 40.0% | |
| ! | TTCATGTGCTTTTCTCCTTG+TGG | - | chr6_2:58656662-58656681 | Msa0921390:intron | 40.0% |
| !!! | TTTGCACCCCCACTATTTTT+TGG | - | chr6_2:58656951-58656970 | Msa0921390:intron | 40.0% |
| ! | AGAGCACCAAAAAATAGTGG+GGG | + | chr6_2:58656960-58656979 | None:intergenic | 40.0% |
| !! | GAGAGCACCAAAAAATAGTG+GGG | + | chr6_2:58656961-58656980 | None:intergenic | 40.0% |
| !! | GTTGTTGTTGGTAGTAGTGG+TGG | + | chr6_2:58652400-58652419 | None:intergenic | 45.0% |
| CCTTTGCAGGTTATGACTTG+AGG | + | chr6_2:58652517-58652536 | None:intergenic | 45.0% | |
| CCTCAAGTCATAACCTGCAA+AGG | - | chr6_2:58652514-58652533 | Msa0921390:three_prime_UTR | 45.0% | |
| AACAAACAGCTGCAGTAGCA+TGG | - | chr6_2:58652643-58652662 | Msa0921390:three_prime_UTR | 45.0% | |
| ACAAACAGCTGCAGTAGCAT+GGG | - | chr6_2:58652644-58652663 | Msa0921390:three_prime_UTR | 45.0% | |
| CTAATCTCCAATGGTTGAGG+AGG | + | chr6_2:58652711-58652730 | None:intergenic | 45.0% | |
| CTCCTCAACCATTGGAGATT+AGG | - | chr6_2:58652709-58652728 | Msa0921390:CDS | 45.0% | |
| ATCACTACGACAAAGAGAGG+TGG | + | chr6_2:58652748-58652767 | None:intergenic | 45.0% | |
| GTCGTAGTGATCTTTCTGCT+TGG | - | chr6_2:58652757-58652776 | Msa0921390:CDS | 45.0% | |
| CTATAGATGAGGGGTAACCT+TGG | - | chr6_2:58653107-58653126 | Msa0921390:intron | 45.0% | |
| CAACTTTACCAGTTGTGCCA+AGG | + | chr6_2:58653127-58653146 | None:intergenic | 45.0% | |
| GTCATGTGACTGTAAGGTCA+CGG | - | chr6_2:58653149-58653168 | Msa0921390:intron | 45.0% | |
| TCATGTGACTGTAAGGTCAC+GGG | - | chr6_2:58653150-58653169 | Msa0921390:intron | 45.0% | |
| ! | TTACACAAGAGGCTGTTTCC+AGG | + | chr6_2:58653183-58653202 | None:intergenic | 45.0% |
| GCTGCGTACAATACACCAAA+TGG | - | chr6_2:58653215-58653234 | Msa0921390:intron | 45.0% | |
| !! | CGCCAGACACAGTTTTAATC+TGG | + | chr6_2:58653457-58653476 | None:intergenic | 45.0% |
| ! | ATATTTGGCCACGAAGCATC+TGG | - | chr6_2:58653815-58653834 | Msa0921390:intron | 45.0% |
| ! | TATTTGGCCACGAAGCATCT+GGG | - | chr6_2:58653816-58653835 | Msa0921390:intron | 45.0% |
| TAGATTACCCAGATGCTTCG+TGG | + | chr6_2:58653826-58653845 | None:intergenic | 45.0% | |
| ATGTCACTCTAACTGAGCGT+TGG | + | chr6_2:58653990-58654009 | None:intergenic | 45.0% | |
| AGATAGTAGGCTGGAATCGT+TGG | + | chr6_2:58654148-58654167 | None:intergenic | 45.0% | |
| ACTATGACTGAAGGCAATCC+AGG | - | chr6_2:58654184-58654203 | Msa0921390:intron | 45.0% | |
| CAGACCGCAATTTACAGCTA+TGG | + | chr6_2:58654310-58654329 | None:intergenic | 45.0% | |
| CAAATGCAATTGCGGCACAT+TGG | - | chr6_2:58654330-58654349 | Msa0921390:CDS | 45.0% | |
| TAGGAGAATGCATGTCATGC+AGG | - | chr6_2:58654565-58654584 | Msa0921390:intron | 45.0% | |
| ! | AGTCCTACGGGTTACACAAT+GGG | + | chr6_2:58654930-58654949 | None:intergenic | 45.0% |
| ! | TAGTCCTACGGGTTACACAA+TGG | + | chr6_2:58654931-58654950 | None:intergenic | 45.0% |
| !! | AAGGTGGTGGAAATTCGCTA+TGG | + | chr6_2:58654993-58655012 | None:intergenic | 45.0% |
| ! | CGTGGATCCTTTTGTCACAT+CGG | + | chr6_2:58655174-58655193 | None:intergenic | 45.0% |
| CGATGTGACAAAAGGATCCA+CGG | - | chr6_2:58655172-58655191 | Msa0921390:intron | 45.0% | |
| GGATCCACGGTGGTTATATT+TGG | - | chr6_2:58655185-58655204 | Msa0921390:intron | 45.0% | |
| AGATATAGTGGCCGAGTACT+TGG | + | chr6_2:58655239-58655258 | None:intergenic | 45.0% | |
| CCTTGCGCAACCTATTGAAT+AGG | + | chr6_2:58655407-58655426 | None:intergenic | 45.0% | |
| CCTATTCAATAGGTTGCGCA+AGG | - | chr6_2:58655404-58655423 | Msa0921390:intron | 45.0% | |
| TCTAGATGCACCCCTTAGTT+TGG | + | chr6_2:58655432-58655451 | None:intergenic | 45.0% | |
| GTACAAAGAACCTATCGTGC+AGG | - | chr6_2:58655639-58655658 | Msa0921390:intron | 45.0% | |
| GAATAATCGACCTGCACGAT+AGG | + | chr6_2:58655652-58655671 | None:intergenic | 45.0% | |
| ACAGCATGATTGCAATGCAG+TGG | + | chr6_2:58655833-58655852 | None:intergenic | 45.0% | |
| ! | TTCCTTGTTTACAACAGGGG+TGG | - | chr6_2:58655998-58656017 | Msa0921390:intron | 45.0% |
| ! | TCCTTGTTTACAACAGGGGT+GGG | - | chr6_2:58655999-58656018 | Msa0921390:intron | 45.0% |
| !! | TGTAACACTTGGTGTGCCAA+AGG | - | chr6_2:58656029-58656048 | Msa0921390:intron | 45.0% |
| CCATAATGAGCTGACATCTC+AGG | + | chr6_2:58656060-58656079 | None:intergenic | 45.0% | |
| CCTGAGATGTCAGCTCATTA+TGG | - | chr6_2:58656057-58656076 | Msa0921390:intron | 45.0% | |
| AGGACTAATCTCCCACAATG+TGG | - | chr6_2:58656455-58656474 | Msa0921390:intron | 45.0% | |
| ! | TTGGTGGTTTGCCACATTGT+GGG | + | chr6_2:58656469-58656488 | None:intergenic | 45.0% |
| ! | ATTGGTGGTTTGCCACATTG+TGG | + | chr6_2:58656470-58656489 | None:intergenic | 45.0% |
| ACATCGTCGGACATTCAATG+TGG | + | chr6_2:58656525-58656544 | None:intergenic | 45.0% | |
| ! | GTAAGGGTGTGTTTACGAGT+TGG | - | chr6_2:58657028-58657047 | Msa0921390:CDS | 45.0% |
| ! | AAAAAGTATGAGGGGGAAGC+AGG | + | chr6_2:58657085-58657104 | None:intergenic | 45.0% |
| !! | ATAAAAAAAAAATACTAAAA+AGG | + | chr6_2:58652558-58652577 | None:intergenic | 5.0% |
| !!! | TTTTATATATTTTTACTTTA+TGG | - | chr6_2:58656220-58656239 | Msa0921390:intron | 5.0% |
| !! | ATGTTTATATTAAAAATTAA+GGG | + | chr6_2:58656592-58656611 | None:intergenic | 5.0% |
| !! | TATGTTTATATTAAAAATTA+AGG | + | chr6_2:58656593-58656612 | None:intergenic | 5.0% |
| TTCCTCCATCTAGGAGTGGT+AGG | + | chr6_2:58652370-58652389 | None:intergenic | 50.0% | |
| TAGGTTCCTCCATCTAGGAG+TGG | + | chr6_2:58652374-58652393 | None:intergenic | 50.0% | |
| !! | TTGGTAGTAGTGGTGGTGGT+AGG | + | chr6_2:58652393-58652412 | None:intergenic | 50.0% |
| !! | GTTGTTGGTAGTAGTGGTGG+TGG | + | chr6_2:58652397-58652416 | None:intergenic | 50.0% |
| CAAACAGCTGCAGTAGCATG+GGG | - | chr6_2:58652645-58652664 | Msa0921390:three_prime_UTR | 50.0% | |
| AGTCAGTCCTCCTCAACCAT+TGG | - | chr6_2:58652701-58652720 | Msa0921390:CDS | 50.0% | |
| CTAAAGCTCCCGCATACACA+GGG | + | chr6_2:58653258-58653277 | None:intergenic | 50.0% | |
| ACTAAAGCTCCCGCATACAC+AGG | + | chr6_2:58653259-58653278 | None:intergenic | 50.0% | |
| AGTAGGCTGGAATCGTTGGA+CGG | + | chr6_2:58654144-58654163 | None:intergenic | 50.0% | |
| GCGGTCTGCAAATGCAATTG+CGG | - | chr6_2:58654322-58654341 | Msa0921390:CDS | 50.0% | |
| ! | TGCAGGATTGTTGAGAGCGT+AGG | - | chr6_2:58654492-58654511 | Msa0921390:intron | 50.0% |
| ! | GCAGGATTGTTGAGAGCGTA+GGG | - | chr6_2:58654493-58654512 | Msa0921390:intron | 50.0% |
| ! | ATTGTTGAGAGCGTAGGGCT+AGG | - | chr6_2:58654498-58654517 | Msa0921390:intron | 50.0% |
| TCATGCAGGCTGTGCAAATC+AGG | - | chr6_2:58654579-58654598 | Msa0921390:intron | 50.0% | |
| TGTCCCATTGTGTAACCCGT+AGG | - | chr6_2:58654924-58654943 | Msa0921390:CDS | 50.0% | |
| GTGTGTTCTGCAGGTTTCTG+AGG | + | chr6_2:58654971-58654990 | None:intergenic | 50.0% | |
| TTCGCTATGGTGTGTTCTGC+AGG | + | chr6_2:58654980-58654999 | None:intergenic | 50.0% | |
| CAATAGGTCTAGGTGCAGCA+TGG | - | chr6_2:58655141-58655160 | Msa0921390:intron | 50.0% | |
| TGTGACAAAAGGATCCACGG+TGG | - | chr6_2:58655175-58655194 | Msa0921390:intron | 50.0% | |
| ! | CCTTGTTTACAACAGGGGTG+GGG | - | chr6_2:58656000-58656019 | Msa0921390:intron | 50.0% |
| TGGGGCTTGACTGTAACACT+TGG | - | chr6_2:58656018-58656037 | Msa0921390:intron | 50.0% | |
| GACATCTCAGGCTTCACCTT+TGG | + | chr6_2:58656048-58656067 | None:intergenic | 50.0% | |
| AGGGGTTGAGGCTAGAAGAA+AGG | - | chr6_2:58656435-58656454 | Msa0921390:intron | 50.0% | |
| GGGGAGAATTGCTGAAGTAG+CGG | - | chr6_2:58656902-58656921 | Msa0921390:intron | 50.0% | |
| AGCAGGACAGAAGGGGATTT+GGG | + | chr6_2:58657068-58657087 | None:intergenic | 50.0% | |
| AAGCAGGACAGAAGGGGATT+TGG | + | chr6_2:58657069-58657088 | None:intergenic | 50.0% | |
| CATCTAGGAGTGGTAGGTGG+AGG | + | chr6_2:58652364-58652383 | None:intergenic | 55.0% | |
| CTCCACCTACCACTCCTAGA+TGG | - | chr6_2:58652362-58652381 | Msa0921390:three_prime_UTR | 55.0% | |
| CTCCATCTAGGAGTGGTAGG+TGG | + | chr6_2:58652367-58652386 | None:intergenic | 55.0% | |
| CACCTACCACTCCTAGATGG+AGG | - | chr6_2:58652365-58652384 | Msa0921390:three_prime_UTR | 55.0% | |
| GGTGGTAGGTTCCTCCATCT+AGG | + | chr6_2:58652379-58652398 | None:intergenic | 55.0% | |
| GGAACTGCACTCACCTTTGC+AGG | + | chr6_2:58652530-58652549 | None:intergenic | 55.0% | |
| !! | AGCTGGAGAGGCATTGGTGA+TGG | - | chr6_2:58652668-58652687 | Msa0921390:exon | 55.0% |
| !! | TGGAGAGGCATTGGTGATGG+AGG | - | chr6_2:58652671-58652690 | Msa0921390:CDS | 55.0% |
| !! | GGCATTGGTGATGGAGGAAG+TGG | - | chr6_2:58652677-58652696 | Msa0921390:CDS | 55.0% |
| AGGGGTAACCTTGGCACAAC+TGG | - | chr6_2:58653116-58653135 | Msa0921390:intron | 55.0% | |
| AAGGTCACGGGTTCAAGTCC+TGG | - | chr6_2:58653162-58653181 | Msa0921390:intron | 55.0% | |
| ! | ATGCGGGAGCTTTAGTGCAC+CGG | - | chr6_2:58653263-58653282 | Msa0921390:intron | 55.0% |
| TGTGTCGGGGTAGTGAGTGT+TGG | + | chr6_2:58653480-58653499 | None:intergenic | 55.0% | |
| GCTTCGTGGCCAAATATGCG+AGG | + | chr6_2:58653812-58653831 | None:intergenic | 55.0% | |
| CTTAGCTGTGGGGTTTCTGC+AGG | - | chr6_2:58654798-58654817 | Msa0921390:CDS | 55.0% | |
| TTGCGCAAGGGGCCAAACTA+AGG | - | chr6_2:58655417-58655436 | Msa0921390:intron | 55.0% | |
| TGCGCAAGGGGCCAAACTAA+GGG | - | chr6_2:58655418-58655437 | Msa0921390:intron | 55.0% | |
| CCCCACCCCTGTTGTAAACA+AGG | + | chr6_2:58656003-58656022 | None:intergenic | 55.0% | |
| AGTAGCATGGGGAGCTGGAG+AGG | - | chr6_2:58652656-58652675 | Msa0921390:exon | 60.0% | |
| ! | ATGGGGAGCTGGAGAGGCAT+TGG | - | chr6_2:58652662-58652681 | Msa0921390:exon | 60.0% |
| CAAATGGTCGGACCCCTTCC+CGG | - | chr6_2:58653231-58653250 | Msa0921390:intron | 60.0% | |
| CATACACAGGGTCCGGGAAG+GGG | + | chr6_2:58653246-58653265 | None:intergenic | 60.0% | |
| GCATACACAGGGTCCGGGAA+GGG | + | chr6_2:58653247-58653266 | None:intergenic | 60.0% | |
| CTTCCCGGACCCTGTGTATG+CGG | - | chr6_2:58653246-58653265 | Msa0921390:intron | 60.0% | |
| TTCCCGGACCCTGTGTATGC+GGG | - | chr6_2:58653247-58653266 | Msa0921390:intron | 60.0% | |
| ! | TGCGGGAGCTTTAGTGCACC+GGG | - | chr6_2:58653264-58653283 | Msa0921390:intron | 60.0% |
| GCGCAAGGGGCCAAACTAAG+GGG | - | chr6_2:58655419-58655438 | Msa0921390:intron | 60.0% | |
| AGGGGGAAGCAGGACAGAAG+GGG | + | chr6_2:58657075-58657094 | None:intergenic | 60.0% | |
| GAGGGGGAAGCAGGACAGAA+GGG | + | chr6_2:58657076-58657095 | None:intergenic | 60.0% | |
| TGAGGGGGAAGCAGGACAGA+AGG | + | chr6_2:58657077-58657096 | None:intergenic | 60.0% | |
| GCTGCAGTAGCATGGGGAGC+TGG | - | chr6_2:58652651-58652670 | Msa0921390:exon | 65.0% | |
| CGGGAAGGGGTCCGACCATT+TGG | + | chr6_2:58653233-58653252 | None:intergenic | 65.0% | |
| CGCATACACAGGGTCCGGGA+AGG | + | chr6_2:58653248-58653267 | None:intergenic | 65.0% | |
| CTCCCGCATACACAGGGTCC+GGG | + | chr6_2:58653252-58653271 | None:intergenic | 65.0% | |
| GCTCCCGCATACACAGGGTC+CGG | + | chr6_2:58653253-58653272 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6_2 | gene | 58652349 | 58657195 | 58652349 | ID=Msa0921390;Name=Msa0921390 |
| chr6_2 | mRNA | 58652349 | 58657195 | 58652349 | ID=Msa0921390-mRNA-1;Parent=Msa0921390;Name=Msa0921390-mRNA-1;_AED=0.12;_eAED=0.12;_QI=144|0.88|0.8|1|1|1|10|321|337 |
| chr6_2 | exon | 58652349 | 58652786 | 58652349 | ID=Msa0921390-mRNA-1:exon:8760;Parent=Msa0921390-mRNA-1 |
| chr6_2 | exon | 58653368 | 58653450 | 58653368 | ID=Msa0921390-mRNA-1:exon:8759;Parent=Msa0921390-mRNA-1 |
| chr6_2 | exon | 58653733 | 58653784 | 58653733 | ID=Msa0921390-mRNA-1:exon:8758;Parent=Msa0921390-mRNA-1 |
| chr6_2 | exon | 58653884 | 58653945 | 58653884 | ID=Msa0921390-mRNA-1:exon:8757;Parent=Msa0921390-mRNA-1 |
| chr6_2 | exon | 58654053 | 58654128 | 58654053 | ID=Msa0921390-mRNA-1:exon:8756;Parent=Msa0921390-mRNA-1 |
| chr6_2 | exon | 58654315 | 58654397 | 58654315 | ID=Msa0921390-mRNA-1:exon:8755;Parent=Msa0921390-mRNA-1 |
| chr6_2 | exon | 58654725 | 58655047 | 58654725 | ID=Msa0921390-mRNA-1:exon:8754;Parent=Msa0921390-mRNA-1 |
| chr6_2 | exon | 58655707 | 58655744 | 58655707 | ID=Msa0921390-mRNA-1:exon:8753;Parent=Msa0921390-mRNA-1 |
| chr6_2 | exon | 58656756 | 58656892 | 58656756 | ID=Msa0921390-mRNA-1:exon:8752;Parent=Msa0921390-mRNA-1 |
| chr6_2 | exon | 58657009 | 58657195 | 58657009 | ID=Msa0921390-mRNA-1:exon:8751;Parent=Msa0921390-mRNA-1 |
| chr6_2 | five_prime_UTR | 58657052 | 58657195 | 58657052 | ID=Msa0921390-mRNA-1:five_prime_utr;Parent=Msa0921390-mRNA-1 |
| chr6_2 | CDS | 58657009 | 58657051 | 58657009 | ID=Msa0921390-mRNA-1:cds;Parent=Msa0921390-mRNA-1 |
| chr6_2 | CDS | 58656756 | 58656892 | 58656756 | ID=Msa0921390-mRNA-1:cds;Parent=Msa0921390-mRNA-1 |
| chr6_2 | CDS | 58655707 | 58655744 | 58655707 | ID=Msa0921390-mRNA-1:cds;Parent=Msa0921390-mRNA-1 |
| chr6_2 | CDS | 58654725 | 58655047 | 58654725 | ID=Msa0921390-mRNA-1:cds;Parent=Msa0921390-mRNA-1 |
| chr6_2 | CDS | 58654315 | 58654397 | 58654315 | ID=Msa0921390-mRNA-1:cds;Parent=Msa0921390-mRNA-1 |
| chr6_2 | CDS | 58654053 | 58654128 | 58654053 | ID=Msa0921390-mRNA-1:cds;Parent=Msa0921390-mRNA-1 |
| chr6_2 | CDS | 58653884 | 58653945 | 58653884 | ID=Msa0921390-mRNA-1:cds;Parent=Msa0921390-mRNA-1 |
| chr6_2 | CDS | 58653733 | 58653784 | 58653733 | ID=Msa0921390-mRNA-1:cds;Parent=Msa0921390-mRNA-1 |
| chr6_2 | CDS | 58653368 | 58653450 | 58653368 | ID=Msa0921390-mRNA-1:cds;Parent=Msa0921390-mRNA-1 |
| chr6_2 | CDS | 58652670 | 58652786 | 58652670 | ID=Msa0921390-mRNA-1:cds;Parent=Msa0921390-mRNA-1 |
| chr6_2 | three_prime_UTR | 58652349 | 58652669 | 58652349 | ID=Msa0921390-mRNA-1:three_prime_utr;Parent=Msa0921390-mRNA-1 |
| Gene Sequence |
| Protein sequence |
