AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1188340


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1188340 MtrunA17_Chr8g0353261 97.235 434 12 0 1 434 1 434 0.0 858
Msa1188340 MtrunA17_Chr1g0164401 82.692 416 71 1 19 434 15 429 0.0 693
Msa1188340 MtrunA17_Chr3g0082281 82.828 297 50 1 138 434 25 320 7.32e-167 471
Msa1188340 MtrunA17_Chr3g0133071 55.734 436 178 9 8 433 7 437 7.99e-146 422
Msa1188340 MtrunA17_Chr3g0130931 31.618 408 239 15 51 433 56 448 1.74e-53 185
Msa1188340 MtrunA17_Chr3g0099891 32.626 377 224 13 66 428 89 449 1.04e-49 175
Msa1188340 MtrunA17_Chr7g0275731 31.915 423 261 11 28 433 72 484 5.98e-49 173
Msa1188340 MtrunA17_Chr1g0212321 35.244 349 211 9 94 433 144 486 1.89e-48 172
Msa1188340 MtrunA17_Chr2g0291201 32.346 439 237 19 35 433 33 451 3.44e-48 171
Msa1188340 MtrunA17_Chr1g0210201 31.486 397 249 10 50 433 81 467 3.91e-48 171
Msa1188340 MtrunA17_Chr3g0082301 75.258 97 23 1 62 158 1 96 4.08e-46 155
Msa1188340 MtrunA17_Chr4g0001991 31.481 378 214 14 83 434 160 518 9.22e-45 163
Msa1188340 MtrunA17_Chr6g0484901 32.948 346 212 10 97 433 157 491 2.94e-41 152
Msa1188340 MtrunA17_Chr8g0390761 29.107 347 227 10 97 433 117 454 7.50e-41 151
Msa1188340 MtrunA17_Chr3g0095891 32.061 393 230 12 71 433 73 458 9.70e-41 150
Msa1188340 MtrunA17_Chr5g0442921 32.570 393 224 15 71 433 172 553 4.29e-40 150
Msa1188340 MtrunA17_Chr1g0165201 33.048 351 217 9 94 433 126 469 8.12e-40 148
Msa1188340 MtrunA17_Chr3g0099901 33.516 364 211 15 83 428 130 480 1.64e-38 145
Msa1188340 MtrunA17_Chr4g0056211 31.343 402 205 17 97 433 75 470 2.25e-38 144
Msa1188340 MtrunA17_Chr2g0310831 27.570 428 270 16 32 434 29 441 6.01e-38 143
Msa1188340 MtrunA17_Chr6g0457401 30.858 431 261 16 27 434 21 437 2.92e-37 140
Msa1188340 MtrunA17_Chr5g0415951 29.673 428 265 17 29 434 22 435 2.15e-34 133
Msa1188340 MtrunA17_Chr5g0395911 31.486 397 226 19 72 434 30 414 5.97e-34 131
Msa1188340 MtrunA17_Chr5g0399171 28.276 435 232 18 65 433 49 469 3.83e-33 130
Msa1188340 MtrunA17_Chr3g0110191 29.477 363 219 15 98 434 88 439 4.25e-33 129
Msa1188340 MtrunA17_Chr8g0386441 26.914 431 271 16 10 421 12 417 1.35e-32 128
Msa1188340 MtrunA17_Chr7g0239001 27.763 371 225 12 99 433 62 425 1.46e-32 127
Msa1188340 MtrunA17_Chr2g0307991 28.261 368 228 16 92 434 49 405 2.20e-32 127
Msa1188340 MtrunA17_Chr3g0087851 27.378 431 272 16 29 434 23 437 9.97e-32 125
Msa1188340 MtrunA17_Chr5g0434411 28.493 365 224 13 98 434 83 438 2.98e-31 124
Msa1188340 MtrunA17_Chr2g0308001 27.624 362 237 14 92 434 54 409 5.24e-31 123
Msa1188340 MtrunA17_Chr8g0352661 28.082 438 274 17 5 421 7 424 5.65e-31 123
Msa1188340 MtrunA17_Chr2g0310821 26.733 404 263 13 32 421 46 430 1.41e-30 122
Msa1188340 MtrunA17_Chr7g0267171 29.091 385 215 16 97 433 91 465 1.49e-30 122
Msa1188340 MtrunA17_Chr8g0352671 27.494 451 273 19 10 434 15 437 2.17e-30 122
Msa1188340 MtrunA17_Chr5g0435871 27.009 448 283 17 7 434 12 435 1.20e-29 119
Msa1188340 MtrunA17_Chr4g0027681 27.427 412 246 19 61 434 41 437 1.45e-29 120
Msa1188340 MtrunA17_Chr5g0395931 28.678 401 243 18 62 434 51 436 1.59e-29 119
Msa1188340 MtrunA17_Chr5g0435971 26.786 448 284 17 7 434 9 432 7.87e-29 117
Msa1188340 MtrunA17_Chr2g0320621 27.027 407 254 15 61 434 42 438 2.54e-28 116
Msa1188340 MtrunA17_Chr2g0310801 26.887 424 272 16 32 434 28 434 1.08e-27 114
Msa1188340 MtrunA17_Chr3g0112051 27.520 367 207 14 96 433 73 409 6.26e-27 112
Msa1188340 MtrunA17_Chr5g0419291 26.218 431 281 16 9 421 5 416 2.39e-26 110
Msa1188340 MtrunA17_Chr5g0434441 30.352 369 214 18 98 434 70 427 3.24e-26 110
Msa1188340 MtrunA17_Chr5g0401601 27.568 370 217 19 97 434 89 439 3.50e-25 108
Msa1188340 MtrunA17_Chr6g0487471 27.333 450 282 18 7 434 9 435 1.08e-24 105
Msa1188340 MtrunA17_Chr2g0333991 24.887 442 288 18 7 426 9 428 2.59e-24 104
Msa1188340 MtrunA17_Chr7g0265331 27.200 375 221 18 97 434 82 441 3.73e-24 104
Msa1188340 MtrunA17_Chr2g0307461 27.446 368 228 12 97 433 71 430 1.03e-23 102
Msa1188340 MtrunA17_Chr2g0312941 26.954 371 224 14 94 426 85 446 1.30e-23 102
Msa1188340 MtrunA17_Chr1g0179751 24.885 434 263 19 46 434 55 470 3.13e-23 102
Msa1188340 MtrunA17_Chr2g0311451 25.607 453 287 19 7 434 9 436 8.65e-23 100
Msa1188340 MtrunA17_Chr5g0406001 28.495 372 208 17 97 433 113 461 1.29e-22 100
Msa1188340 MtrunA17_Chr4g0023351 31.982 222 130 10 89 289 45 266 2.26e-22 96.7
Msa1188340 MtrunA17_Chr5g0395871 28.406 433 265 20 21 434 19 425 8.73e-22 97.1
Msa1188340 MtrunA17_Chr7g0249451 26.055 403 249 18 65 434 45 431 2.54e-21 95.9
Msa1188340 MtrunA17_Chr7g0221681 25.806 372 232 13 97 434 73 434 2.85e-21 95.9
Msa1188340 MtrunA17_Chr6g0486981 26.020 392 247 16 69 434 63 437 5.13e-21 94.7
Msa1188340 MtrunA17_Chr4g0053721 26.027 365 227 17 97 433 81 430 5.69e-21 95.5
Msa1188340 MtrunA17_Chr5g0425141 26.796 362 212 14 104 433 109 449 1.92e-19 90.5
Msa1188340 MtrunA17_Chr4g0061641 27.926 376 234 16 79 434 39 397 9.13e-19 87.8
Msa1188340 MtrunA17_Chr5g0395891 28.808 302 191 12 149 434 20 313 9.04e-18 84.0
Msa1188340 MtrunA17_Chr4g0010951 25.926 405 211 18 97 433 62 445 1.91e-17 84.3
Msa1188340 MtrunA17_Chr3g0130741 26.005 373 219 17 97 434 85 435 3.34e-17 83.6
Msa1188340 MtrunA17_Chr1g0179091 26.361 349 213 15 97 434 52 367 4.81e-17 82.4
Msa1188340 MtrunA17_Chr8g0384731 25.296 423 255 19 41 427 21 418 5.25e-17 82.8
Msa1188340 MtrunA17_Chr2g0287821 23.871 465 273 19 14 432 13 442 4.56e-15 77.0
Msa1188340 MtrunA17_Chr3g0124421 25.000 368 214 17 104 433 107 450 1.19e-14 75.9
Msa1188340 MtrunA17_Chr2g0287841 22.678 366 222 15 104 420 75 428 5.09e-14 73.6
Msa1188340 MtrunA17_Chr1g0185651 23.721 430 243 18 58 428 28 431 2.97e-13 71.2
Msa1188340 MtrunA17_Chr1g0185661 24.259 371 224 15 105 428 706 1066 3.35e-13 72.0
Msa1188340 MtrunA17_Chr1g0185661 23.174 397 239 16 82 428 34 414 1.66e-12 69.7
Msa1188340 MtrunA17_Chr5g0419151 27.211 294 183 11 154 434 93 368 3.48e-12 67.8
Msa1188340 MtrunA17_Chr2g0287811 23.670 376 235 15 97 427 40 408 7.25e-12 67.0
Msa1188340 MtrunA17_Chr1g0187841 22.365 389 231 14 94 427 44 416 4.44e-11 64.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1188340 AT5G07030.1 72.422 417 109 3 24 434 39 455 0.0 601
Msa1188340 AT3G54400.1 68.585 417 122 5 20 434 16 425 0.0 578
Msa1188340 AT1G09750.1 52.998 417 181 8 30 433 34 448 7.98e-143 416
Msa1188340 AT5G10770.1 32.867 429 247 16 33 434 60 474 7.10e-54 187
Msa1188340 AT3G25700.1 33.171 410 230 14 61 433 47 449 2.33e-50 177
Msa1188340 AT5G10760.1 32.458 419 248 12 33 433 63 464 2.60e-50 177
Msa1188340 AT2G03200.1 32.240 366 211 12 94 433 104 458 3.47e-49 174
Msa1188340 AT3G61820.1 33.989 356 215 7 94 433 132 483 7.53e-47 168
Msa1188340 AT1G01300.1 31.250 432 245 15 34 433 73 484 1.61e-45 164
Msa1188340 AT3G20015.1 30.693 404 252 9 53 433 72 470 5.07e-45 163
Msa1188340 AT1G25510.1 33.333 348 215 8 94 433 145 483 1.41e-43 159
Msa1188340 AT3G18490.1 33.056 360 222 11 84 433 150 500 1.55e-42 157
Msa1188340 AT1G79720.1 31.156 398 226 18 67 433 102 482 4.51e-42 155
Msa1188340 AT5G45120.1 30.424 401 210 17 97 433 83 478 2.47e-39 148
Msa1188340 AT1G66180.1 29.383 405 226 20 71 434 42 427 2.01e-37 141
Msa1188340 AT2G42980.1 30.311 386 232 13 80 433 144 524 7.04e-37 141
Msa1188340 AT3G52500.1 30.649 385 214 14 97 434 90 468 1.28e-36 140
Msa1188340 AT3G59080.1 28.995 438 245 14 58 433 99 532 9.74e-36 138
Msa1188340 AT5G37540.1 28.822 399 236 19 72 433 51 438 1.30e-33 131
Msa1188340 AT2G39710.1 30.000 370 214 15 96 428 64 425 7.88e-33 129
Msa1188340 AT3G02740.1 28.607 402 243 16 62 434 54 440 1.15e-32 129
Msa1188340 AT3G02740.2 29.428 367 219 16 97 434 10 365 5.98e-32 126
Msa1188340 AT5G22850.1 27.078 421 254 18 52 434 36 441 1.20e-30 124
Msa1188340 AT3G12700.1 28.708 418 246 18 51 434 62 461 2.26e-30 122
Msa1188340 AT5G02190.1 28.689 366 218 12 106 433 82 442 2.52e-30 122
Msa1188340 AT3G59080.2 28.140 430 223 14 58 433 99 496 2.90e-28 117
Msa1188340 AT2G23945.1 27.536 414 254 17 52 433 49 448 1.12e-27 114
Msa1188340 AT1G64830.1 26.761 426 270 15 31 434 24 429 6.16e-27 112
Msa1188340 AT4G30040.1 25.843 445 273 19 3 421 7 420 1.24e-26 111
Msa1188340 AT4G30030.1 28.531 354 224 15 97 433 78 419 3.37e-26 110
Msa1188340 AT1G08210.4 29.087 416 250 18 52 434 72 475 9.89e-26 109
Msa1188340 AT1G08210.1 29.087 416 250 18 52 434 38 441 1.03e-25 109
Msa1188340 AT5G33340.1 26.667 345 227 11 93 420 86 421 1.12e-25 108
Msa1188340 AT1G08210.3 29.087 416 250 18 52 434 86 489 1.35e-25 109
Msa1188340 AT5G43100.2 26.158 367 232 17 90 434 69 418 1.48e-25 108
Msa1188340 AT5G43100.1 26.158 367 232 17 90 434 69 418 1.65e-25 109
Msa1188340 AT2G36670.2 24.826 431 267 18 46 434 43 458 2.54e-25 108
Msa1188340 AT2G36670.1 24.658 438 264 19 46 434 43 463 1.98e-24 105
Msa1188340 AT2G36670.4 25.936 374 226 17 97 434 34 392 4.07e-24 104
Msa1188340 AT2G36670.3 25.936 374 226 17 97 434 34 392 4.07e-24 104
Msa1188340 AT1G08210.2 31.081 370 212 17 52 388 38 397 3.80e-23 102
Msa1188340 AT2G28040.2 26.648 349 207 14 91 420 50 368 1.84e-22 99.0
Msa1188340 AT3G50050.1 26.374 364 223 17 97 434 93 437 2.50e-22 100
Msa1188340 AT2G28040.1 26.648 349 207 14 91 420 59 377 2.88e-22 98.6
Msa1188340 AT5G36260.1 23.284 408 270 17 56 434 41 434 1.37e-21 97.4
Msa1188340 AT4G35880.1 26.796 362 197 18 97 420 107 438 3.22e-21 96.3
Msa1188340 AT2G28010.1 26.023 342 219 12 91 420 59 378 3.94e-20 92.0
Msa1188340 AT2G28030.1 25.519 337 215 12 97 420 61 374 6.67e-20 91.7
Msa1188340 AT1G65240.1 24.740 384 241 16 83 434 60 427 9.11e-20 91.7
Msa1188340 AT4G16563.1 26.464 427 228 16 83 433 75 491 1.43e-19 91.3
Msa1188340 AT4G33490.2 27.568 370 209 19 97 429 60 407 1.75e-19 90.5
Msa1188340 AT3G51350.1 27.249 378 207 18 97 433 102 452 5.46e-19 89.7
Msa1188340 AT1G77480.2 27.926 376 209 18 97 433 67 419 6.66e-19 89.0
Msa1188340 AT3G51340.2 26.486 370 214 16 97 433 103 447 8.98e-19 89.0
Msa1188340 AT1G77480.1 27.926 376 209 18 97 433 67 419 9.05e-19 88.6
Msa1188340 AT2G35615.1 26.685 371 228 15 97 434 85 444 8.60e-18 85.5
Msa1188340 AT1G31450.1 26.230 366 234 14 97 434 85 442 3.94e-17 83.6
Msa1188340 AT3G51360.9 25.124 402 250 15 62 433 65 445 4.85e-17 83.6
Msa1188340 AT3G51360.1 25.124 402 250 15 62 433 55 435 4.92e-17 83.6
Msa1188340 AT2G28225.1 27.195 353 204 17 97 426 67 389 6.80e-17 82.8
Msa1188340 AT3G51360.7 25.410 366 225 13 97 433 5 351 1.98e-16 81.3
Msa1188340 AT3G51330.2 27.374 358 195 18 104 421 109 441 5.42e-16 80.1
Msa1188340 AT4G33490.1 29.811 265 145 15 97 341 57 300 1.25e-15 79.0
Msa1188340 AT2G17760.1 24.682 393 231 17 80 433 83 449 8.37e-15 76.6
Msa1188340 AT3G25700.2 31.818 176 96 7 61 215 47 219 1.34e-14 75.1
Msa1188340 AT3G25700.2 37.594 133 71 4 309 433 219 347 7.73e-14 72.8
Msa1188340 AT3G51340.4 27.491 291 159 13 97 356 103 372 3.39e-14 74.3
Msa1188340 AT1G44130.1 27.441 379 207 20 97 434 49 400 4.17e-14 74.3
Msa1188340 AT3G51340.1 27.491 291 159 13 97 356 103 372 4.73e-14 74.3
Msa1188340 AT3G51360.2 27.517 298 171 13 62 335 65 341 1.27e-13 72.4
Msa1188340 AT3G42550.1 22.113 407 257 13 46 434 26 390 1.13e-12 69.7

Find 160 sgRNAs with CRISPR-Local

Find 307 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CAATAATAATCTTGTTAAAT+TGG 0.097354 8_1:+28554766 Msa1188340:three_prime_UTR
TCATCTTGGATGTCACATTT+TGG 0.163682 8_1:-28550525 None:intergenic
AGGAAAGGTGTTAGGAAAAT+TGG 0.168272 8_1:-28550465 None:intergenic
TCAATAAAACAACTTAATTA+AGG 0.173727 8_1:-28554973 None:intergenic
ATGTGGATTTGTAGAGATTT+TGG 0.242851 8_1:-28553076 None:intergenic
GAAGATGATTATTGAATTTA+CGG 0.253745 8_1:+28554994 Msa1188340:three_prime_UTR
AATAATAATCTTGTTAAATT+GGG 0.255666 8_1:+28554767 Msa1188340:three_prime_UTR
TTATTTATCTTCATGTCGTT+TGG 0.288508 8_1:+28554822 Msa1188340:three_prime_UTR
TGCACCTAATAAGTGGTTCT+TGG 0.288512 8_1:+28554721 Msa1188340:exon
CTAAAACTTGTGGACTTAAC+AGG 0.288816 8_1:-28550870 None:intergenic
GGGGTTATGAGTTAATTATT+TGG 0.291029 8_1:+28554787 Msa1188340:three_prime_UTR
CAAAGAGAATAGAGTATATA+GGG 0.295801 8_1:+28555093 Msa1188340:three_prime_UTR
GTTATAGTTGGTACAACTAT+TGG 0.305248 8_1:-28554493 None:intergenic
TCAACCAAGAACCACTTATT+AGG 0.305673 8_1:-28554725 None:intergenic
AGGGTTGTCACGGGTAGTTT+TGG 0.306603 8_1:-28554442 None:intergenic
GCTGCTTGGATTCCTTGTTC+TGG 0.307297 8_1:+28550813 Msa1188340:CDS
TAATAGAGTGATGATCTTCT+AGG 0.307781 8_1:-28553206 None:intergenic
CCAAAAGTGTACCTTGGAAT+TGG 0.323950 8_1:-28552966 None:intergenic
ACAAAGAGAATAGAGTATAT+AGG 0.325557 8_1:+28555092 Msa1188340:three_prime_UTR
TTTCTTACGGCGGTGTATAC+AGG 0.325812 8_1:-28554397 None:intergenic
TACATTGTTAAGGCTAAGTT+TGG 0.332559 8_1:+28550744 Msa1188340:CDS
TGTGCATTCAACTTCACTTA+TGG 0.334737 8_1:+28552888 Msa1188340:CDS
ACCACCTCAAACTTTGCTTT+TGG 0.339719 8_1:+28550770 Msa1188340:CDS
CAACACCGAGTTCACGTTAT+CGG 0.348267 8_1:-28554614 None:intergenic
CAATAAAACAACTTAATTAA+GGG 0.357378 8_1:-28554972 None:intergenic
GGGTTATGAGTTAATTATTT+GGG 0.359673 8_1:+28554788 Msa1188340:three_prime_UTR
GCACCACAACAGGGTCTATT+GGG 0.360076 8_1:+28553017 Msa1188340:CDS
TATTTATCTTCATGTCGTTT+GGG 0.362355 8_1:+28554823 Msa1188340:three_prime_UTR
GGAAAGGTGTTAGGAAAATT+GGG 0.362750 8_1:-28550464 None:intergenic
TTGGGGTTTGGGCTTGAACT+AGG 0.369719 8_1:-28550506 None:intergenic
GAGAACATTGGCTGAAGATA+TGG 0.376954 8_1:-28550569 None:intergenic
AGCACCACAACAGGGTCTAT+TGG 0.384446 8_1:+28553016 Msa1188340:CDS
TTATAGTTGGTACAACTATT+GGG 0.384549 8_1:-28554492 None:intergenic
GAGTTAATTATTTGGGTAGT+TGG 0.388556 8_1:+28554795 Msa1188340:three_prime_UTR
CGCCGGTAGCACCACATGTT+TGG 0.392098 8_1:+28554576 Msa1188340:CDS
GGTCTATTGGGCTTGGGCCG+AGG 0.393741 8_1:+28553029 Msa1188340:CDS
TGGGGTATACTTGATCCTCT+TGG 0.395670 8_1:-28553171 None:intergenic
ATGTCGTTTGGGCTTTGTAT+TGG 0.397523 8_1:+28554834 Msa1188340:three_prime_UTR
CTCAACGACCCACTAAAATT+AGG 0.398218 8_1:-28553128 None:intergenic
CCAATTCCAAGGTACACTTT+TGG 0.404889 8_1:+28552966 Msa1188340:CDS
GATGTGCCCAACTCAAGAAT+TGG 0.410152 8_1:+28554682 Msa1188340:CDS
AACACCGAGTTCACGTTATC+GGG 0.412131 8_1:-28554613 None:intergenic
GGCTGTGTTAACAAAACAAC+AGG 0.414272 8_1:+28552987 Msa1188340:CDS
TCAGTTGTACCAATTGCATC+AGG 0.418514 8_1:+28550696 Msa1188340:CDS
CGATATCCCTCCGGCTGCGC+TGG 0.418711 8_1:+28553268 Msa1188340:CDS
GGGGTATACTTGATCCTCTT+GGG 0.424317 8_1:-28553170 None:intergenic
AAGATGATTATTGAATTTAC+GGG 0.424704 8_1:+28554995 Msa1188340:three_prime_UTR
AGGAAGTTCAGCACCACAAC+AGG 0.431654 8_1:+28553007 Msa1188340:CDS
TTTAGTGGGTCGTTGAGACT+TGG 0.435249 8_1:+28553134 Msa1188340:CDS
TTCAACCCAACTACCGGTGC+TGG 0.436030 8_1:+28553293 Msa1188340:CDS
AACTTGGTTGCTATTAAAGT+TGG 0.437202 8_1:+28553233 Msa1188340:CDS
CTTCCACCGCAAGTGGGGTT+GGG 0.437902 8_1:-28552861 None:intergenic
ATGGTTCCAGCACCGGTAGT+TGG 0.439867 8_1:-28553299 None:intergenic
GGCAGAGAAGGAAAGGTGTT+AGG 0.445674 8_1:-28550473 None:intergenic
TGGGGTTTGGGCTTGAACTA+GGG 0.446889 8_1:-28550505 None:intergenic
GGGTTGAACGCCAGCGCAGC+CGG 0.450344 8_1:-28553278 None:intergenic
ATGAAGAGGCAGAGAAGGAA+AGG 0.453167 8_1:-28550480 None:intergenic
GTGATAATGGTGGCTTGTGA+TGG 0.453265 8_1:-28550429 None:intergenic
TGGTTCCAGCACCGGTAGTT+GGG 0.453469 8_1:-28553298 None:intergenic
GGCCAAACATGTGGTGCTAC+CGG 0.458811 8_1:-28554578 None:intergenic
ATCACTCTATTATGTTAACT+TGG 0.460738 8_1:+28553217 Msa1188340:CDS
CAAAAGTGTACCTTGGAATT+GGG 0.463126 8_1:-28552965 None:intergenic
CTTCTAGGGTTTCTGAGAAG+TGG 0.468084 8_1:-28553191 None:intergenic
GCTTCCACCGCAAGTGGGGT+TGG 0.468113 8_1:-28552862 None:intergenic
TGAGGATGTTGTCTGGTGGT+AGG 0.470698 8_1:-28554543 None:intergenic
AACAATACCAATTCTTGAGT+TGG 0.471847 8_1:-28554689 None:intergenic
TTCTAGGGTTTCTGAGAAGT+GGG 0.476620 8_1:-28553190 None:intergenic
AAATTAGGCGATTTAAAGCT+AGG 0.477945 8_1:-28553113 None:intergenic
ACAATACCAATTCTTGAGTT+GGG 0.478056 8_1:-28554688 None:intergenic
GTGGACTTAACAGGAGCAAA+AGG 0.478097 8_1:-28550861 None:intergenic
TGAGCTTTGCACCTAATAAG+TGG 0.478115 8_1:+28554714 Msa1188340:exon
ACTATAACATTCTTGTTCTC+CGG 0.478423 8_1:+28554508 Msa1188340:CDS
ACCACATGTTTGGCCATGGC+TGG 0.480852 8_1:+28554586 Msa1188340:CDS
ATTTGTCTCCCTGATGCAAT+TGG 0.484764 8_1:-28550705 None:intergenic
TCTCTTTGTATTCGCTCCAA+TGG 0.485759 8_1:-28555078 None:intergenic
ATCCTCTTGGGCTGATACAC+CGG 0.486552 8_1:-28553158 None:intergenic
ACTTGTCCAGCTTAGTTGCT+AGG 0.489142 8_1:+28550670 Msa1188340:CDS
ACAACAGGGTCTATTGGGCT+TGG 0.499921 8_1:+28553022 Msa1188340:CDS
CTTTGGGTCAAGAGCGACAA+TGG 0.501769 8_1:-28553053 None:intergenic
ACTATGTAGTAACATATGTA+AGG 0.502309 8_1:+28554873 Msa1188340:three_prime_UTR
CAACAGGGTCTATTGGGCTT+GGG 0.502732 8_1:+28553023 Msa1188340:CDS
AACCATCAAAACCAATGTCA+TGG 0.503013 8_1:+28550598 Msa1188340:CDS
ACAAGTATTGCATTCTAGCT+TGG 0.506286 8_1:-28550653 None:intergenic
TGATAATGGTGGCTTGTGAT+GGG 0.506813 8_1:-28550428 None:intergenic
AAGTCCAACATACATTGTTA+AGG 0.507953 8_1:+28550734 Msa1188340:CDS
ACTAACATTCCTAAAACTTG+TGG 0.509218 8_1:-28550880 None:intergenic
ATTCCTTGTTCTGGTTGTGT+TGG 0.509240 8_1:+28550822 Msa1188340:CDS
GAGGATGTTGTCTGGTGGTA+GGG 0.510247 8_1:-28554542 None:intergenic
CTTTGTGATGGTATTTGCCA+CGG 0.513971 8_1:+28554941 Msa1188340:three_prime_UTR
TCAAGAGCGACAATGGGCCT+CGG 0.514129 8_1:-28553046 None:intergenic
CTATGTATGAGGATGTTGTC+TGG 0.515277 8_1:-28554550 None:intergenic
AATAGAGTGATGATCTTCTA+GGG 0.515833 8_1:-28553205 None:intergenic
TGGTTCTCCTCAGTGCAAGC+AGG 0.516456 8_1:+28550905 Msa1188340:CDS
ATAATAATCTTGTTAAATTG+GGG 0.519365 8_1:+28554768 Msa1188340:three_prime_UTR
TTTATATTGTAGCTTTGTGA+TGG 0.520356 8_1:+28554929 Msa1188340:three_prime_UTR
TTAGCCTTAACAATGTATGT+TGG 0.520799 8_1:-28550738 None:intergenic
GGTCCTTAGCTTCTAGCTGT+AGG 0.521564 8_1:-28550632 None:intergenic
TTAGTGGGTCGTTGAGACTT+GGG 0.523029 8_1:+28553135 Msa1188340:CDS
TCGGCGAAACTCGTTTCTTA+CGG 0.530256 8_1:-28554410 None:intergenic
AAACTACCCGTGACAACCCT+AGG 0.530327 8_1:+28554445 Msa1188340:CDS
TGGCTAGAGTAAGTGTGTCT+TGG 0.530852 8_1:-28552938 None:intergenic
CACGCGCTTCCACCGCAAGT+GGG 0.533182 8_1:-28552867 None:intergenic
TGGGTCGTTGAGACTTGGGC+CGG 0.534117 8_1:+28553139 Msa1188340:CDS
GGGAGATGAAGAGGCAGAGA+AGG 0.534284 8_1:-28550485 None:intergenic
CTGGCGTTCAACCCAACTAC+CGG 0.536552 8_1:+28553287 Msa1188340:CDS
TGATTTCCTAGCAACTAAGC+TGG 0.540455 8_1:-28550676 None:intergenic
AAATGTGACATCCAAGATGA+TGG 0.542321 8_1:+28550528 Msa1188340:CDS
ATACTAGTAGTGATGCTGCT+TGG 0.543500 8_1:+28550799 Msa1188340:CDS
TTTGGGTCAAGAGCGACAAT+GGG 0.547119 8_1:-28553052 None:intergenic
TTCCTCCATTGCAGCTAGTG+TGG 0.551143 8_1:+28552914 Msa1188340:CDS
AACGAGTTTCGCCGACGAGT+TGG 0.552600 8_1:+28554418 Msa1188340:CDS
TTGGACCACACTAGCTGCAA+TGG 0.556729 8_1:-28552919 None:intergenic
ACCATCAAAACCAATGTCAT+GGG 0.556771 8_1:+28550599 Msa1188340:CDS
TGGTTGCTATTAAAGTTGGC+CGG 0.557965 8_1:+28553237 Msa1188340:CDS
ACACTTTCTTCCCATGACAT+TGG 0.559822 8_1:-28550609 None:intergenic
TGAGTGTTGAGCCATCATCT+TGG 0.560394 8_1:-28550539 None:intergenic
TTTGTGATGGTATTTGCCAC+GGG 0.566838 8_1:+28554942 Msa1188340:three_prime_UTR
GAGAACAAGAATGTTATAGT+TGG 0.568970 8_1:-28554505 None:intergenic
TGTCCTACAGCTAGAAGCTA+AGG 0.572859 8_1:+28550629 Msa1188340:CDS
TAGCACCACATGTTTGGCCA+TGG 0.574173 8_1:+28554582 Msa1188340:CDS
AGGCAAACAGTAAGAGAATG+TGG 0.579732 8_1:-28553093 None:intergenic
ACACAGCCAAAAGTGTACCT+TGG 0.590538 8_1:-28552972 None:intergenic
CAACCAACACAACCAGAACA+AGG 0.590941 8_1:-28550825 None:intergenic
TTGAACGCCAGCGCAGCCGG+AGG 0.592132 8_1:-28553275 None:intergenic
GAACCCACCTAGGGTTGTCA+CGG 0.594011 8_1:-28554452 None:intergenic
AAAGCCAAAAGCAAAGTTTG+AGG 0.597951 8_1:-28550774 None:intergenic
GTTATCGGGTGCTCCAGCCA+TGG 0.598642 8_1:-28554599 None:intergenic
GAAAATCGTCGATATCCCTC+CGG 0.600442 8_1:+28553259 Msa1188340:CDS
GCATGTGTCGAACCCACCTA+GGG 0.606828 8_1:-28554461 None:intergenic
ATCCTCATACATAGCACCGC+CGG 0.613653 8_1:+28554559 Msa1188340:CDS
TGAAACTTCAATTTGCAATG+TGG 0.613669 8_1:+28555043 Msa1188340:three_prime_UTR
ATGGTTTGAATGGAGAACAT+TGG 0.614704 8_1:-28550581 None:intergenic
TTTCATGGTTGTGATAATGG+TGG 0.616539 8_1:-28550439 None:intergenic
GACCACACTAGCTGCAATGG+AGG 0.619691 8_1:-28552916 None:intergenic
AACCCACCTAGGGTTGTCAC+GGG 0.621727 8_1:-28554451 None:intergenic
TGGTAGGGTTACATTCATGC+CGG 0.624318 8_1:-28554527 None:intergenic
GTACCTTGGAATTGGGTCAG+TGG 0.625290 8_1:-28552958 None:intergenic
AGCATGTGTCGAACCCACCT+AGG 0.627390 8_1:-28554462 None:intergenic
CTTGAACTAGGGAGATGAAG+AGG 0.631936 8_1:-28550494 None:intergenic
GTACCCAACCCCACTTGCGG+TGG 0.634233 8_1:+28552858 Msa1188340:CDS
CAGGTACCCAACCCCACTTG+CGG 0.634918 8_1:+28552855 Msa1188340:intron
TACCGGCGGTGCTATGTATG+AGG 0.638539 8_1:-28554561 None:intergenic
GCCAAAAGCAAAGTTTGAGG+TGG 0.640074 8_1:-28550771 None:intergenic
CAGTTGTACCAATTGCATCA+GGG 0.640171 8_1:+28550697 Msa1188340:CDS
AGCACCCGATAACGTGAACT+CGG 0.644037 8_1:+28554609 Msa1188340:CDS
TCCAGCCATGGCCAAACATG+TGG 0.650087 8_1:-28554587 None:intergenic
GCGAAACTCGTTTCTTACGG+CGG 0.651651 8_1:-28554407 None:intergenic
GGAAGTTCAGCACCACAACA+GGG 0.652373 8_1:+28553008 Msa1188340:CDS
GGCCGGTGTATCAGCCCAAG+AGG 0.653863 8_1:+28553156 Msa1188340:CDS
TCTAGGGTTTCTGAGAAGTG+GGG 0.654621 8_1:-28553189 None:intergenic
TAGCCACTGACCCAATTCCA+AGG 0.656080 8_1:+28552955 Msa1188340:CDS
AAGCCCAATAGACCCTGTTG+TGG 0.656487 8_1:-28553020 None:intergenic
CTACCCGTGACAACCCTAGG+TGG 0.658638 8_1:+28554448 Msa1188340:CDS
TGTATGAGGATGTTGTCTGG+TGG 0.659104 8_1:-28554547 None:intergenic
TACCCGTGACAACCCTAGGT+GGG 0.660272 8_1:+28554449 Msa1188340:CDS
CAAACATGTGGTGCTACCGG+CGG 0.675349 8_1:-28554575 None:intergenic
AATTAAGGGATATATGCCCG+TGG 0.711109 8_1:-28554958 None:intergenic
TGGGCACATCAAATAACACA+CGG 0.733394 8_1:-28554669 None:intergenic
TTACTAACCTGCTTGCACTG+AGG 0.771908 8_1:-28550912 None:intergenic
GCACATCAAATAACACACGG+TGG 0.779535 8_1:-28554666 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATTTAATGTTATATTGTATT+GGG - chr8_1:28551434-28551453 None:intergenic 10.0%
!! TATTTAATGTTATATTGTAT+TGG - chr8_1:28551435-28551454 None:intergenic 10.0%
!! AAGAAAAATGTATAAATAAA+GGG - chr8_1:28551499-28551518 None:intergenic 10.0%
!! TAAGAAAAATGTATAAATAA+AGG - chr8_1:28551500-28551519 None:intergenic 10.0%
!! TATTTCTTTAATGAAAAAAA+TGG - chr8_1:28553991-28554010 None:intergenic 10.0%
!!! ATTTTTTTCATTAAAGAAAT+AGG + chr8_1:28553990-28554009 Msa1188340:intron 10.0%
!! AATAATAATCTTGTTAAATT+GGG + chr8_1:28554767-28554786 Msa1188340:three_prime_UTR 10.0%
!! AAAATGTCAATTTCAAAAAA+AGG - chr8_1:28551001-28551020 None:intergenic 15.0%
!!! TTTTGAAATTGACATTTTTA+TGG + chr8_1:28551003-28551022 Msa1188340:intron 15.0%
!! AGAAAAATGTATAAATAAAG+GGG - chr8_1:28551498-28551517 None:intergenic 15.0%
!!! TTTTTGTTAATATTTCGTTA+TGG - chr8_1:28551872-28551891 None:intergenic 15.0%
!! TTAGAAAATTTAAACCTAAT+TGG + chr8_1:28551999-28552018 Msa1188340:intron 15.0%
!!! TGTTCAAATTTTTTTATAGT+TGG - chr8_1:28552068-28552087 None:intergenic 15.0%
!!! TGTCTAAAAATTTAAGATTT+TGG - chr8_1:28552103-28552122 None:intergenic 15.0%
!! TAGATGAATAATTTCTTAAT+TGG - chr8_1:28552559-28552578 None:intergenic 15.0%
!! TGTATAAATACAAAATAGAT+AGG - chr8_1:28553695-28553714 None:intergenic 15.0%
!! CAATAATAATCTTGTTAAAT+TGG + chr8_1:28554766-28554785 Msa1188340:three_prime_UTR 15.0%
!! ATAATAATCTTGTTAAATTG+GGG + chr8_1:28554768-28554787 Msa1188340:three_prime_UTR 15.0%
!! CAATAAAACAACTTAATTAA+GGG - chr8_1:28554975-28554994 None:intergenic 15.0%
!! TCAATAAAACAACTTAATTA+AGG - chr8_1:28554976-28554995 None:intergenic 15.0%
!! TACATATACACTTTATTAGA+AGG - chr8_1:28551153-28551172 None:intergenic 20.0%
!!! GACACTTTTTTTTAGAAAAT+GGG - chr8_1:28551365-28551384 None:intergenic 20.0%
!!! ATGAATTAACTCTTTTTTGA+TGG - chr8_1:28551646-28551665 None:intergenic 20.0%
!!! ATTTGATAATGAACCAAATT+TGG + chr8_1:28551775-28551794 Msa1188340:intron 20.0%
!!! ATAGTTGAAAAGTTGATATA+TGG + chr8_1:28551894-28551913 Msa1188340:intron 20.0%
!!! TAAACCTAATTGGATAATTT+TGG + chr8_1:28552009-28552028 Msa1188340:intron 20.0%
!! TTTACCAAAATTATCCAATT+AGG - chr8_1:28552016-28552035 None:intergenic 20.0%
!!! TAAAAAGGTGCTTATATATA+GGG - chr8_1:28552238-28552257 None:intergenic 20.0%
!!! ATAAAAAGGTGCTTATATAT+AGG - chr8_1:28552239-28552258 None:intergenic 20.0%
!!! TATAAGCACCTTTTTATTAT+AGG + chr8_1:28552242-28552261 Msa1188340:intron 20.0%
!!! TTAATTTGTTTTCTTGCTAT+AGG - chr8_1:28552341-28552360 None:intergenic 20.0%
!!! TTCATAGTTTTTAAAAGTGT+CGG - chr8_1:28552364-28552383 None:intergenic 20.0%
!!! TTTTGTTTTGAAAAAAGTGT+CGG - chr8_1:28552451-28552470 None:intergenic 20.0%
!!! AAATAGCTTTTGGTTTTTTT+GGG - chr8_1:28552763-28552782 None:intergenic 20.0%
!!! TAAATAGCTTTTGGTTTTTT+TGG - chr8_1:28552764-28552783 None:intergenic 20.0%
!!! GAAAAGTAATAAATAGCTTT+TGG - chr8_1:28552773-28552792 None:intergenic 20.0%
!!! TTTATGTTTTGTACTTTTTG+TGG - chr8_1:28552803-28552822 None:intergenic 20.0%
!!! CAAAAAGTACAAAACATAAA+CGG + chr8_1:28552803-28552822 Msa1188340:intron 20.0%
!!! ATCATTGTTATTTTCAACTT+TGG + chr8_1:28553421-28553440 Msa1188340:intron 20.0%
!! TTCTCAAACAAAAAAAACTT+TGG + chr8_1:28553456-28553475 Msa1188340:intron 20.0%
!! TTATTACAAAGTCATACATA+TGG - chr8_1:28553868-28553887 None:intergenic 20.0%
!! AATTACTATTGTTATATCCT+TGG - chr8_1:28554094-28554113 None:intergenic 20.0%
!! AAGGATATAACAATAGTAAT+TGG + chr8_1:28554093-28554112 Msa1188340:intron 20.0%
!! AACAATAGTAATTGGTTAAA+TGG + chr8_1:28554101-28554120 Msa1188340:intron 20.0%
!! TTAAATGGTTTATACAATGT+CGG + chr8_1:28554116-28554135 Msa1188340:intron 20.0%
!!! TTTACACTAATTTGTATTGA+AGG + chr8_1:28554274-28554293 Msa1188340:intron 20.0%
!!! TTTTCTTATTGAATATTACC+AGG + chr8_1:28554349-28554368 Msa1188340:intron 20.0%
!! GAAGATGATTATTGAATTTA+CGG + chr8_1:28554994-28555013 Msa1188340:three_prime_UTR 20.0%
!! AAGATGATTATTGAATTTAC+GGG + chr8_1:28554995-28555014 Msa1188340:three_prime_UTR 20.0%
!! AATTGACATTTTTATGGCAT+TGG + chr8_1:28551009-28551028 Msa1188340:intron 25.0%
!!! GATTATTAGTTTCTTTTCTC+TGG + chr8_1:28551304-28551323 Msa1188340:intron 25.0%
!!! GGACACTTTTTTTTAGAAAA+TGG - chr8_1:28551366-28551385 None:intergenic 25.0%
!!! TGAAATGAGTCAGTTATTTT+GGG - chr8_1:28551387-28551406 None:intergenic 25.0%
!! TTGAAATGAGTCAGTTATTT+TGG - chr8_1:28551388-28551407 None:intergenic 25.0%
! CATTATACATCAACCAAATT+TGG - chr8_1:28551791-28551810 None:intergenic 25.0%
! TGTTAATATTTCGTTATGGA+GGG - chr8_1:28551868-28551887 None:intergenic 25.0%
! TTGTTAATATTTCGTTATGG+AGG - chr8_1:28551869-28551888 None:intergenic 25.0%
! CTACTCTTACATGAAATATA+AGG - chr8_1:28551960-28551979 None:intergenic 25.0%
!!! GATAATTTTGGTAAAGACTA+GGG + chr8_1:28552021-28552040 Msa1188340:intron 25.0%
!! ACCTTTTTATTATAGGCAAA+GGG + chr8_1:28552249-28552268 Msa1188340:intron 25.0%
!!! TAAGTTGTTTTTGAAAGTGT+CGG - chr8_1:28552397-28552416 None:intergenic 25.0%
!! TCAAACATGTGATATTTTTC+AGG + chr8_1:28552836-28552855 Msa1188340:intron 25.0%
!! TTTAAATCGCCTAATTTTAG+TGG + chr8_1:28553119-28553138 Msa1188340:CDS 25.0%
!!! TTAAATCGCCTAATTTTAGT+GGG + chr8_1:28553120-28553139 Msa1188340:CDS 25.0%
! ATCACTCTATTATGTTAACT+TGG + chr8_1:28553217-28553236 Msa1188340:CDS 25.0%
! ATTAGTACCTGAATCAAAAA+TGG - chr8_1:28553321-28553340 None:intergenic 25.0%
!! AAAACTTTGGACATGTATTT+TGG + chr8_1:28553469-28553488 Msa1188340:intron 25.0%
! CTAACACTATCAAATAACTT+TGG + chr8_1:28553510-28553529 Msa1188340:intron 25.0%
! AAACACACATGCATTATTAT+TGG - chr8_1:28553581-28553600 None:intergenic 25.0%
! TATTATGCTTGATCAACAAA+GGG + chr8_1:28553609-28553628 Msa1188340:intron 25.0%
!! TGATACGATTAATTTTTCCT+AGG + chr8_1:28553652-28553671 Msa1188340:intron 25.0%
! AAATACACAACATAAAACCT+AGG - chr8_1:28553672-28553691 None:intergenic 25.0%
! TTATACATACCTTCAAAACA+TGG + chr8_1:28553708-28553727 Msa1188340:intron 25.0%
! TATACATACCTTCAAAACAT+GGG + chr8_1:28553709-28553728 Msa1188340:intron 25.0%
! TAATGAAAAAAATGGATGTG+CGG - chr8_1:28553983-28554002 None:intergenic 25.0%
! TTATTCTAACTATGTTACCA+AGG + chr8_1:28554074-28554093 Msa1188340:intron 25.0%
!! TTATAGTTGGTACAACTATT+GGG - chr8_1:28554495-28554514 None:intergenic 25.0%
! GGGTTATGAGTTAATTATTT+GGG + chr8_1:28554788-28554807 Msa1188340:three_prime_UTR 25.0%
! TTATTTATCTTCATGTCGTT+TGG + chr8_1:28554822-28554841 Msa1188340:three_prime_UTR 25.0%
!! TATTTATCTTCATGTCGTTT+GGG + chr8_1:28554823-28554842 Msa1188340:three_prime_UTR 25.0%
! ACTATGTAGTAACATATGTA+AGG + chr8_1:28554873-28554892 Msa1188340:three_prime_UTR 25.0%
!!! TTTATATTGTAGCTTTGTGA+TGG + chr8_1:28554929-28554948 Msa1188340:three_prime_UTR 25.0%
! ACAAAGAGAATAGAGTATAT+AGG + chr8_1:28555092-28555111 Msa1188340:three_prime_UTR 25.0%
! CAAAGAGAATAGAGTATATA+GGG + chr8_1:28555093-28555112 Msa1188340:three_prime_UTR 25.0%
! GTTTTTCATGGTTGTGATAA+TGG - chr8_1:28550445-28550464 None:intergenic 30.0%
! TAGGAAAATTGGGTTTTTCA+TGG - chr8_1:28550457-28550476 None:intergenic 30.0%
!!! ATTGGTTTTGATGGTTTGAA+TGG - chr8_1:28550594-28550613 None:intergenic 30.0%
AAGTCCAACATACATTGTTA+AGG + chr8_1:28550734-28550753 Msa1188340:CDS 30.0%
!! TTAGCCTTAACAATGTATGT+TGG - chr8_1:28550741-28550760 None:intergenic 30.0%
TACATTGTTAAGGCTAAGTT+TGG + chr8_1:28550744-28550763 Msa1188340:CDS 30.0%
ACTAACATTCCTAAAACTTG+TGG - chr8_1:28550883-28550902 None:intergenic 30.0%
!!! AGTTTTAGGAATGTTAGTTG+TGG + chr8_1:28550885-28550904 Msa1188340:CDS 30.0%
!! TTTTATGGCATTGGAATGTT+TGG + chr8_1:28551018-28551037 Msa1188340:intron 30.0%
TTCACTTAAGCTTATGCTAT+TGG + chr8_1:28551267-28551286 Msa1188340:intron 30.0%
TGTATAAATAAAGGGGAAAG+TGG - chr8_1:28551491-28551510 None:intergenic 30.0%
TGCAGATAGTATTATGTCTT+TGG - chr8_1:28551671-28551690 None:intergenic 30.0%
!! GGATAATTTTGGTAAAGACT+AGG + chr8_1:28552020-28552039 Msa1188340:intron 30.0%
! CACCTTTTTATTATAGGCAA+AGG + chr8_1:28552248-28552267 Msa1188340:intron 30.0%
ACCCTTTGCCTATAATAAAA+AGG - chr8_1:28552253-28552272 None:intergenic 30.0%
!!! TCTGCTGTTTTTATAAGTGT+CGG - chr8_1:28552310-28552329 None:intergenic 30.0%
!!! ATCTTTTTTGCCTTTAGGAA+AGG - chr8_1:28552730-28552749 None:intergenic 30.0%
!!! TTTGTAGAGATTTTGGCTTT+GGG - chr8_1:28553072-28553091 None:intergenic 30.0%
!!! ATTTGTAGAGATTTTGGCTT+TGG - chr8_1:28553073-28553092 None:intergenic 30.0%
! ATGTGGATTTGTAGAGATTT+TGG - chr8_1:28553079-28553098 None:intergenic 30.0%
! AAATTAGGCGATTTAAAGCT+AGG - chr8_1:28553116-28553135 None:intergenic 30.0%
AATAGAGTGATGATCTTCTA+GGG - chr8_1:28553208-28553227 None:intergenic 30.0%
TAATAGAGTGATGATCTTCT+AGG - chr8_1:28553209-28553228 None:intergenic 30.0%
! AACTTGGTTGCTATTAAAGT+TGG + chr8_1:28553233-28553252 Msa1188340:CDS 30.0%
CTATTATGCTTGATCAACAA+AGG + chr8_1:28553608-28553627 Msa1188340:intron 30.0%
ATACATACCTTCAAAACATG+GGG + chr8_1:28553710-28553729 Msa1188340:intron 30.0%
TAATCTTGATCTCAAAATGG+TGG - chr8_1:28553932-28553951 None:intergenic 30.0%
ACGTAATCTTGATCTCAAAA+TGG - chr8_1:28553935-28553954 None:intergenic 30.0%
! GTTATAGTTGGTACAACTAT+TGG - chr8_1:28554496-28554515 None:intergenic 30.0%
GAGAACAAGAATGTTATAGT+TGG - chr8_1:28554508-28554527 None:intergenic 30.0%
ACTATAACATTCTTGTTCTC+CGG + chr8_1:28554508-28554527 Msa1188340:CDS 30.0%
ACAATACCAATTCTTGAGTT+GGG - chr8_1:28554691-28554710 None:intergenic 30.0%
AACAATACCAATTCTTGAGT+TGG - chr8_1:28554692-28554711 None:intergenic 30.0%
! TGGTTGAGATCAATTTTCTT+AGG + chr8_1:28554741-28554760 Msa1188340:three_prime_UTR 30.0%
GGGGTTATGAGTTAATTATT+TGG + chr8_1:28554787-28554806 Msa1188340:three_prime_UTR 30.0%
GAGTTAATTATTTGGGTAGT+TGG + chr8_1:28554795-28554814 Msa1188340:three_prime_UTR 30.0%
TGAAACTTCAATTTGCAATG+TGG + chr8_1:28555043-28555062 Msa1188340:three_prime_UTR 30.0%
!! TTTCATGGTTGTGATAATGG+TGG - chr8_1:28550442-28550461 None:intergenic 35.0%
!! GGAAAGGTGTTAGGAAAATT+GGG - chr8_1:28550467-28550486 None:intergenic 35.0%
!! AGGAAAGGTGTTAGGAAAAT+TGG - chr8_1:28550468-28550487 None:intergenic 35.0%
! ATCTTGGATGTCACATTTTG+GGG - chr8_1:28550526-28550545 None:intergenic 35.0%
! CATCTTGGATGTCACATTTT+GGG - chr8_1:28550527-28550546 None:intergenic 35.0%
! TCATCTTGGATGTCACATTT+TGG - chr8_1:28550528-28550547 None:intergenic 35.0%
AAATGTGACATCCAAGATGA+TGG + chr8_1:28550528-28550547 Msa1188340:CDS 35.0%
ATGGTTTGAATGGAGAACAT+TGG - chr8_1:28550584-28550603 None:intergenic 35.0%
AACCATCAAAACCAATGTCA+TGG + chr8_1:28550598-28550617 Msa1188340:CDS 35.0%
ACCATCAAAACCAATGTCAT+GGG + chr8_1:28550599-28550618 Msa1188340:CDS 35.0%
! ACAAGTATTGCATTCTAGCT+TGG - chr8_1:28550656-28550675 None:intergenic 35.0%
AAAGCCAAAAGCAAAGTTTG+AGG - chr8_1:28550777-28550796 None:intergenic 35.0%
!!! TCAAACTTTGCTTTTGGCTT+TGG + chr8_1:28550776-28550795 Msa1188340:CDS 35.0%
CTAAAACTTGTGGACTTAAC+AGG - chr8_1:28550873-28550892 None:intergenic 35.0%
! CTGTTAAGTCCACAAGTTTT+AGG + chr8_1:28550871-28550890 Msa1188340:CDS 35.0%
AGAAAATGGGTCAGTTATTC+CGG - chr8_1:28551352-28551371 None:intergenic 35.0%
CCAAAGTAGGTCAATTATAC+CGG + chr8_1:28551534-28551553 Msa1188340:intron 35.0%
CAAAGTAGGTCAATTATACC+GGG + chr8_1:28551535-28551554 Msa1188340:intron 35.0%
! AAGGTGCTTATATATAGGGA+CGG - chr8_1:28552234-28552253 None:intergenic 35.0%
!! GCAAAGGGTGCTTATATATA+GGG + chr8_1:28552264-28552283 Msa1188340:intron 35.0%
ACTACACTTACCTTTCCTAA+AGG + chr8_1:28552717-28552736 Msa1188340:intron 35.0%
!!! TCGTGATCTTTTTTGCCTTT+AGG - chr8_1:28552735-28552754 None:intergenic 35.0%
TGTGCATTCAACTTCACTTA+TGG + chr8_1:28552888-28552907 Msa1188340:CDS 35.0%
! CAAAAGTGTACCTTGGAATT+GGG - chr8_1:28552968-28552987 None:intergenic 35.0%
TCACATTCTCAAGAAAACTG+AGG + chr8_1:28553758-28553777 Msa1188340:intron 35.0%
TCAAGAAAACTGAGGAAAGT+GGG + chr8_1:28553766-28553785 Msa1188340:intron 35.0%
AACGTGCGATGACAAAATTA+AGG + chr8_1:28553800-28553819 Msa1188340:intron 35.0%
!! TGCTTTTTGTACAAGACATG+TGG - chr8_1:28553904-28553923 None:intergenic 35.0%
TTGATCTCAAAATGGTGGTT+GGG - chr8_1:28553927-28553946 None:intergenic 35.0%
TCAACCAAGAACCACTTATT+AGG - chr8_1:28554728-28554747 None:intergenic 35.0%
GTGGAATAGAAAAACTCCAT+TGG + chr8_1:28555062-28555081 Msa1188340:three_prime_UTR 35.0%
!! TGATAATGGTGGCTTGTGAT+GGG - chr8_1:28550431-28550450 None:intergenic 40.0%
!!! GATGTCACATTTTGGGGTTT+GGG - chr8_1:28550520-28550539 None:intergenic 40.0%
! GAGAACATTGGCTGAAGATA+TGG - chr8_1:28550572-28550591 None:intergenic 40.0%
!!! TCCCATGACATTGGTTTTGA+TGG - chr8_1:28550603-28550622 None:intergenic 40.0%
ACACTTTCTTCCCATGACAT+TGG - chr8_1:28550612-28550631 None:intergenic 40.0%
TGATTTCCTAGCAACTAAGC+TGG - chr8_1:28550679-28550698 None:intergenic 40.0%
TCAGTTGTACCAATTGCATC+AGG + chr8_1:28550696-28550715 Msa1188340:CDS 40.0%
CAGTTGTACCAATTGCATCA+GGG + chr8_1:28550697-28550716 Msa1188340:CDS 40.0%
ATTTGTCTCCCTGATGCAAT+TGG - chr8_1:28550708-28550727 None:intergenic 40.0%
! ACCACCTCAAACTTTGCTTT+TGG + chr8_1:28550770-28550789 Msa1188340:CDS 40.0%
ATACTAGTAGTGATGCTGCT+TGG + chr8_1:28550799-28550818 Msa1188340:CDS 40.0%
! ATTCCTTGTTCTGGTTGTGT+TGG + chr8_1:28550822-28550841 Msa1188340:CDS 40.0%
! CTCAACACTACTTGTTAGCT+TGG + chr8_1:28550943-28550962 Msa1188340:intron 40.0%
GAAAATGGGTCAGTTATTCC+GGG - chr8_1:28551351-28551370 None:intergenic 40.0%
TCTGCGTGAAAAACCAAAGT+AGG + chr8_1:28551521-28551540 Msa1188340:intron 40.0%
CCGGTATAATTGACCTACTT+TGG - chr8_1:28551537-28551556 None:intergenic 40.0%
AGACTAGGGTAGATTCACAT+TGG + chr8_1:28552035-28552054 Msa1188340:intron 40.0%
GACTAGGGTAGATTCACATT+GGG + chr8_1:28552036-28552055 Msa1188340:intron 40.0%
TGCTTATATATAGGGACGGA+GGG - chr8_1:28552272-28552291 None:intergenic 40.0%
!! GGCAAAGGGTGCTTATATAT+AGG + chr8_1:28552263-28552282 Msa1188340:intron 40.0%
! AGGGTGCTTATATATAGGGA+CGG + chr8_1:28552268-28552287 Msa1188340:intron 40.0%
TGCTTATATATAGGGACGGA+GGG + chr8_1:28552272-28552291 Msa1188340:intron 40.0%
AAAGGTAAGTGTAGTGACGA+TGG - chr8_1:28552712-28552731 None:intergenic 40.0%
! CCAAAAGTGTACCTTGGAAT+TGG - chr8_1:28552969-28552988 None:intergenic 40.0%
! CCAATTCCAAGGTACACTTT+TGG + chr8_1:28552966-28552985 Msa1188340:CDS 40.0%
GGCTGTGTTAACAAAACAAC+AGG + chr8_1:28552987-28553006 Msa1188340:CDS 40.0%
AGGCAAACAGTAAGAGAATG+TGG - chr8_1:28553096-28553115 None:intergenic 40.0%
CTCAACGACCCACTAAAATT+AGG - chr8_1:28553131-28553150 None:intergenic 40.0%
!! TTCTAGGGTTTCTGAGAAGT+GGG - chr8_1:28553193-28553212 None:intergenic 40.0%
! TGGTTGCTATTAAAGTTGGC+CGG + chr8_1:28553237-28553256 Msa1188340:CDS 40.0%
ATCAAAAATGGTTCCAGCAC+CGG - chr8_1:28553309-28553328 None:intergenic 40.0%
!! GCTGGAACCATTTTTGATTC+AGG + chr8_1:28553311-28553330 Msa1188340:CDS 40.0%
GATCAACAAAGGGAACTAGT+AGG + chr8_1:28553619-28553638 Msa1188340:intron 40.0%
CTCAAGAAAACTGAGGAAAG+TGG + chr8_1:28553765-28553784 Msa1188340:intron 40.0%
TCAAAATCCTACACGTGACT+TGG + chr8_1:28553842-28553861 Msa1188340:intron 40.0%
CTTGATCTCAAAATGGTGGT+TGG - chr8_1:28553928-28553947 None:intergenic 40.0%
CTATGTATGAGGATGTTGTC+TGG - chr8_1:28554553-28554572 None:intergenic 40.0%
!!! GTGGTTTTGTTGTTGCATGT+TGG - chr8_1:28554650-28554669 None:intergenic 40.0%
TGGGCACATCAAATAACACA+CGG - chr8_1:28554672-28554691 None:intergenic 40.0%
TGAGCTTTGCACCTAATAAG+TGG + chr8_1:28554714-28554733 Msa1188340:exon 40.0%
TGCACCTAATAAGTGGTTCT+TGG + chr8_1:28554721-28554740 Msa1188340:exon 40.0%
! ATGTCGTTTGGGCTTTGTAT+TGG + chr8_1:28554834-28554853 Msa1188340:three_prime_UTR 40.0%
CTTTGTGATGGTATTTGCCA+CGG + chr8_1:28554941-28554960 Msa1188340:three_prime_UTR 40.0%
TTTGTGATGGTATTTGCCAC+GGG + chr8_1:28554942-28554961 Msa1188340:three_prime_UTR 40.0%
AATTAAGGGATATATGCCCG+TGG - chr8_1:28554961-28554980 None:intergenic 40.0%
TCTCTTTGTATTCGCTCCAA+TGG - chr8_1:28555081-28555100 None:intergenic 40.0%
!! GTGATAATGGTGGCTTGTGA+TGG - chr8_1:28550432-28550451 None:intergenic 45.0%
ATGAAGAGGCAGAGAAGGAA+AGG - chr8_1:28550483-28550502 None:intergenic 45.0%
CTTGAACTAGGGAGATGAAG+AGG - chr8_1:28550497-28550516 None:intergenic 45.0%
!!! GGATGTCACATTTTGGGGTT+TGG - chr8_1:28550521-28550540 None:intergenic 45.0%
!! TGAGTGTTGAGCCATCATCT+TGG - chr8_1:28550542-28550561 None:intergenic 45.0%
TGTCCTACAGCTAGAAGCTA+AGG + chr8_1:28550629-28550648 Msa1188340:CDS 45.0%
ACTTGTCCAGCTTAGTTGCT+AGG + chr8_1:28550670-28550689 Msa1188340:CDS 45.0%
GCCAAAAGCAAAGTTTGAGG+TGG - chr8_1:28550774-28550793 None:intergenic 45.0%
CAACCAACACAACCAGAACA+AGG - chr8_1:28550828-28550847 None:intergenic 45.0%
GTGGACTTAACAGGAGCAAA+AGG - chr8_1:28550864-28550883 None:intergenic 45.0%
TTACTAACCTGCTTGCACTG+AGG - chr8_1:28550915-28550934 None:intergenic 45.0%
GTAGGTCAATTATACCGGGA+CGG + chr8_1:28551539-28551558 Msa1188340:intron 45.0%
AACAAATACTACCTCCGTCC+CGG - chr8_1:28551556-28551575 None:intergenic 45.0%
GTGCTTATATATAGGGACGG+AGG - chr8_1:28552271-28552290 None:intergenic 45.0%
GTGCTTATATATAGGGACGG+AGG + chr8_1:28552271-28552290 Msa1188340:intron 45.0%
TGGCTAGAGTAAGTGTGTCT+TGG - chr8_1:28552941-28552960 None:intergenic 45.0%
! ACACAGCCAAAAGTGTACCT+TGG - chr8_1:28552975-28552994 None:intergenic 45.0%
TTTGGGTCAAGAGCGACAAT+GGG - chr8_1:28553055-28553074 None:intergenic 45.0%
! TTTAGTGGGTCGTTGAGACT+TGG + chr8_1:28553134-28553153 Msa1188340:CDS 45.0%
! TTAGTGGGTCGTTGAGACTT+GGG + chr8_1:28553135-28553154 Msa1188340:CDS 45.0%
GGGGTATACTTGATCCTCTT+GGG - chr8_1:28553173-28553192 None:intergenic 45.0%
TGGGGTATACTTGATCCTCT+TGG - chr8_1:28553174-28553193 None:intergenic 45.0%
! TCTAGGGTTTCTGAGAAGTG+GGG - chr8_1:28553192-28553211 None:intergenic 45.0%
!! CTTCTAGGGTTTCTGAGAAG+TGG - chr8_1:28553194-28553213 None:intergenic 45.0%
! GAGGGATATCGACGATTTTC+CGG - chr8_1:28553259-28553278 None:intergenic 45.0%
GAAAATCGTCGATATCCCTC+CGG + chr8_1:28553259-28553278 Msa1188340:CDS 45.0%
!! AATTGCGCCCCATGTTTTGA+AGG - chr8_1:28553720-28553739 None:intergenic 45.0%
AGTCGAGTGAATACAGTACC+TGG - chr8_1:28554370-28554389 None:intergenic 45.0%
TTTCTTACGGCGGTGTATAC+AGG - chr8_1:28554400-28554419 None:intergenic 45.0%
TCGGCGAAACTCGTTTCTTA+CGG - chr8_1:28554413-28554432 None:intergenic 45.0%
TGGTAGGGTTACATTCATGC+CGG - chr8_1:28554530-28554549 None:intergenic 45.0%
TGTATGAGGATGTTGTCTGG+TGG - chr8_1:28554550-28554569 None:intergenic 45.0%
AACACCGAGTTCACGTTATC+GGG - chr8_1:28554616-28554635 None:intergenic 45.0%
CAACACCGAGTTCACGTTAT+CGG - chr8_1:28554617-28554636 None:intergenic 45.0%
GCACATCAAATAACACACGG+TGG - chr8_1:28554669-28554688 None:intergenic 45.0%
GATGTGCCCAACTCAAGAAT+TGG + chr8_1:28554682-28554701 Msa1188340:CDS 45.0%
!!! ATTAAAACATTTATAAATTT+TGG + chr8_1:28552501-28552520 Msa1188340:intron 5.0%
!!! TTAAAACATTTATAAATTTT+GGG + chr8_1:28552502-28552521 Msa1188340:intron 5.0%
!!! ATTTAGATATAAATTTTAAT+AGG - chr8_1:28552626-28552645 None:intergenic 5.0%
!! GGCAGAGAAGGAAAGGTGTT+AGG - chr8_1:28550476-28550495 None:intergenic 50.0%
TGGGGTTTGGGCTTGAACTA+GGG - chr8_1:28550508-28550527 None:intergenic 50.0%
TTGGGGTTTGGGCTTGAACT+AGG - chr8_1:28550509-28550528 None:intergenic 50.0%
! GGTCCTTAGCTTCTAGCTGT+AGG - chr8_1:28550635-28550654 None:intergenic 50.0%
GCTGCTTGGATTCCTTGTTC+TGG + chr8_1:28550813-28550832 Msa1188340:CDS 50.0%
CAATATTACTCCCTCCGTCC+CGG + chr8_1:28551330-28551349 Msa1188340:intron 50.0%
ATGGGTCAGTTATTCCGGGA+CGG - chr8_1:28551347-28551366 None:intergenic 50.0%
TTCCTCCATTGCAGCTAGTG+TGG + chr8_1:28552914-28552933 Msa1188340:CDS 50.0%
TTGGACCACACTAGCTGCAA+TGG - chr8_1:28552922-28552941 None:intergenic 50.0%
TAGCCACTGACCCAATTCCA+AGG + chr8_1:28552955-28552974 Msa1188340:CDS 50.0%
GTACCTTGGAATTGGGTCAG+TGG - chr8_1:28552961-28552980 None:intergenic 50.0%
AGGAAGTTCAGCACCACAAC+AGG + chr8_1:28553007-28553026 Msa1188340:CDS 50.0%
GGAAGTTCAGCACCACAACA+GGG + chr8_1:28553008-28553027 Msa1188340:CDS 50.0%
AGCACCACAACAGGGTCTAT+TGG + chr8_1:28553016-28553035 Msa1188340:CDS 50.0%
GCACCACAACAGGGTCTATT+GGG + chr8_1:28553017-28553036 Msa1188340:CDS 50.0%
AAGCCCAATAGACCCTGTTG+TGG - chr8_1:28553023-28553042 None:intergenic 50.0%
ACAACAGGGTCTATTGGGCT+TGG + chr8_1:28553022-28553041 Msa1188340:CDS 50.0%
CAACAGGGTCTATTGGGCTT+GGG + chr8_1:28553023-28553042 Msa1188340:CDS 50.0%
CTTTGGGTCAAGAGCGACAA+TGG - chr8_1:28553056-28553075 None:intergenic 50.0%
ATCCTCTTGGGCTGATACAC+CGG - chr8_1:28553161-28553180 None:intergenic 50.0%
CATATGGCCAAGTCACGTGT+AGG - chr8_1:28553852-28553871 None:intergenic 50.0%
GCGAAACTCGTTTCTTACGG+CGG - chr8_1:28554410-28554429 None:intergenic 50.0%
!!! GTAGTTTTGGGCCAACTCGT+CGG - chr8_1:28554432-28554451 None:intergenic 50.0%
! GGGTTGTCACGGGTAGTTTT+GGG - chr8_1:28554444-28554463 None:intergenic 50.0%
! AGGGTTGTCACGGGTAGTTT+TGG - chr8_1:28554445-28554464 None:intergenic 50.0%
AAACTACCCGTGACAACCCT+AGG + chr8_1:28554445-28554464 Msa1188340:CDS 50.0%
GAGGATGTTGTCTGGTGGTA+GGG - chr8_1:28554545-28554564 None:intergenic 50.0%
TGAGGATGTTGTCTGGTGGT+AGG - chr8_1:28554546-28554565 None:intergenic 50.0%
ATCCTCATACATAGCACCGC+CGG + chr8_1:28554559-28554578 Msa1188340:CDS 50.0%
TAGCACCACATGTTTGGCCA+TGG + chr8_1:28554582-28554601 Msa1188340:CDS 50.0%
AGCACCCGATAACGTGAACT+CGG + chr8_1:28554609-28554628 Msa1188340:CDS 50.0%
GGGAGATGAAGAGGCAGAGA+AGG - chr8_1:28550488-28550507 None:intergenic 55.0%
TGGTTCTCCTCAGTGCAAGC+AGG + chr8_1:28550905-28550924 Msa1188340:CDS 55.0%
GTCAGTTATTCCGGGACGGA+GGG - chr8_1:28551343-28551362 None:intergenic 55.0%
GGTCAATTATACCGGGACGG+AGG + chr8_1:28551542-28551561 Msa1188340:intron 55.0%
GACCACACTAGCTGCAATGG+AGG - chr8_1:28552919-28552938 None:intergenic 55.0%
TCAAGAGCGACAATGGGCCT+CGG - chr8_1:28553049-28553068 None:intergenic 55.0%
CTGGCGTTCAACCCAACTAC+CGG + chr8_1:28553287-28553306 Msa1188340:CDS 55.0%
TTCAACCCAACTACCGGTGC+TGG + chr8_1:28553293-28553312 Msa1188340:CDS 55.0%
!! TGGTTCCAGCACCGGTAGTT+GGG - chr8_1:28553301-28553320 None:intergenic 55.0%
!! ATGGTTCCAGCACCGGTAGT+TGG - chr8_1:28553302-28553321 None:intergenic 55.0%
AACGAGTTTCGCCGACGAGT+TGG + chr8_1:28554418-28554437 Msa1188340:CDS 55.0%
TACCCGTGACAACCCTAGGT+GGG + chr8_1:28554449-28554468 Msa1188340:CDS 55.0%
AACCCACCTAGGGTTGTCAC+GGG - chr8_1:28554454-28554473 None:intergenic 55.0%
GAACCCACCTAGGGTTGTCA+CGG - chr8_1:28554455-28554474 None:intergenic 55.0%
GCATGTGTCGAACCCACCTA+GGG - chr8_1:28554464-28554483 None:intergenic 55.0%
AGCATGTGTCGAACCCACCT+AGG - chr8_1:28554465-28554484 None:intergenic 55.0%
!! TACCGGCGGTGCTATGTATG+AGG - chr8_1:28554564-28554583 None:intergenic 55.0%
!! CAAACATGTGGTGCTACCGG+CGG - chr8_1:28554578-28554597 None:intergenic 55.0%
!! GGCCAAACATGTGGTGCTAC+CGG - chr8_1:28554581-28554600 None:intergenic 55.0%
ACCACATGTTTGGCCATGGC+TGG + chr8_1:28554586-28554605 Msa1188340:CDS 55.0%
TCCAGCCATGGCCAAACATG+TGG - chr8_1:28554590-28554609 None:intergenic 55.0%
GGTCAGTTATTCCGGGACGG+AGG - chr8_1:28551344-28551363 None:intergenic 60.0%
CAGGTACCCAACCCCACTTG+CGG + chr8_1:28552855-28552874 Msa1188340:intron 60.0%
CTTCCACCGCAAGTGGGGTT+GGG - chr8_1:28552864-28552883 None:intergenic 60.0%
TGGGTCGTTGAGACTTGGGC+CGG + chr8_1:28553139-28553158 Msa1188340:CDS 60.0%
CTACCCGTGACAACCCTAGG+TGG + chr8_1:28554448-28554467 Msa1188340:CDS 60.0%
CGCCGGTAGCACCACATGTT+TGG + chr8_1:28554576-28554595 Msa1188340:CDS 60.0%
GTTATCGGGTGCTCCAGCCA+TGG - chr8_1:28554602-28554621 None:intergenic 60.0%
GTACCCAACCCCACTTGCGG+TGG + chr8_1:28552858-28552877 Msa1188340:CDS 65.0%
GCTTCCACCGCAAGTGGGGT+TGG - chr8_1:28552865-28552884 None:intergenic 65.0%
ACGCGCTTCCACCGCAAGTG+GGG - chr8_1:28552869-28552888 None:intergenic 65.0%
CACGCGCTTCCACCGCAAGT+GGG - chr8_1:28552870-28552889 None:intergenic 65.0%
ACACGCGCTTCCACCGCAAG+TGG - chr8_1:28552871-28552890 None:intergenic 65.0%
GGTCTATTGGGCTTGGGCCG+AGG + chr8_1:28553029-28553048 Msa1188340:CDS 65.0%
GGCCGGTGTATCAGCCCAAG+AGG + chr8_1:28553156-28553175 Msa1188340:CDS 65.0%
CGATATCCCTCCGGCTGCGC+TGG + chr8_1:28553268-28553287 Msa1188340:CDS 70.0%
TGAACGCCAGCGCAGCCGGA+GGG - chr8_1:28553277-28553296 None:intergenic 70.0%
TTGAACGCCAGCGCAGCCGG+AGG - chr8_1:28553278-28553297 None:intergenic 70.0%
GGGTTGAACGCCAGCGCAGC+CGG - chr8_1:28553281-28553300 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr8_1 gene 28550392 28555153 28550392 ID=Msa1188340;Name=Msa1188340
chr8_1 mRNA 28550392 28555153 28550392 ID=Msa1188340-mRNA-1;Parent=Msa1188340;Name=Msa1188340-mRNA-1;_AED=0.02;_eAED=0.02;_QI=64|1|1|1|1|1|3|424|434
chr8_1 exon 28550392 28550926 28550392 ID=Msa1188340-mRNA-1:exon:10025;Parent=Msa1188340-mRNA-1
chr8_1 exon 28552858 28553332 28552858 ID=Msa1188340-mRNA-1:exon:10026;Parent=Msa1188340-mRNA-1
chr8_1 exon 28554371 28555153 28554371 ID=Msa1188340-mRNA-1:exon:10027;Parent=Msa1188340-mRNA-1
chr8_1 five_prime_UTR 28550392 28550455 28550392 ID=Msa1188340-mRNA-1:five_prime_utr;Parent=Msa1188340-mRNA-1
chr8_1 CDS 28550456 28550926 28550456 ID=Msa1188340-mRNA-1:cds;Parent=Msa1188340-mRNA-1
chr8_1 CDS 28552858 28553332 28552858 ID=Msa1188340-mRNA-1:cds;Parent=Msa1188340-mRNA-1
chr8_1 CDS 28554371 28554729 28554371 ID=Msa1188340-mRNA-1:cds;Parent=Msa1188340-mRNA-1
chr8_1 three_prime_UTR 28554730 28555153 28554730 ID=Msa1188340-mRNA-1:three_prime_utr;Parent=Msa1188340-mRNA-1
Gene Sequence

>Msa1188340

ATGAAAAACCCAATTTTCCTAACACCTTTCCTTCTCTGCCTCTTCATCTCCCTAGTTCAAGCCCAAACCCCAAAATGTGACATCCAAGATGATGGCTCAACACTCAAAGTGTTCCATATCTTCAGCCAATGTTCTCCATTCAAACCATCAAAACCAATGTCATGGGAAGAAAGTGTCCTACAGCTAGAAGCTAAGGACCAAGCTAGAATGCAATACTTGTCCAGCTTAGTTGCTAGGAAATCAGTTGTACCAATTGCATCAGGGAGACAAATCATACAAAGTCCAACATACATTGTTAAGGCTAAGTTTGGTACACCACCTCAAACTTTGCTTTTGGCTTTGGATACTAGTAGTGATGCTGCTTGGATTCCTTGTTCTGGTTGTGTTGGTTGTTCAACATCAAAACCTTTTGCTCCTGTTAAGTCCACAAGTTTTAGGAATGTTAGTTGTGGTTCTCCTCAGTGCAAGCAGGTACCCAACCCCACTTGCGGTGGAAGCGCGTGTGCATTCAACTTCACTTATGGTAGTTCCTCCATTGCAGCTAGTGTGGTCCAAGACACACTTACTCTAGCCACTGACCCAATTCCAAGGTACACTTTTGGCTGTGTTAACAAAACAACAGGAAGTTCAGCACCACAACAGGGTCTATTGGGCTTGGGCCGAGGCCCATTGTCGCTCTTGACCCAAAGCCAAAATCTCTACAAATCCACATTCTCTTACTGTTTGCCTAGCTTTAAATCGCCTAATTTTAGTGGGTCGTTGAGACTTGGGCCGGTGTATCAGCCCAAGAGGATCAAGTATACCCCACTTCTCAGAAACCCTAGAAGATCATCACTCTATTATGTTAACTTGGTTGCTATTAAAGTTGGCCGGAAAATCGTCGATATCCCTCCGGCTGCGCTGGCGTTCAACCCAACTACCGGTGCTGGAACCATTTTTGATTCAGGTACTGTATTCACTCGACTAGCTGAACCTGTATACACCGCCGTAAGAAACGAGTTTCGCCGACGAGTTGGCCCAAAACTACCCGTGACAACCCTAGGTGGGTTCGACACATGCTACAATGTCCCAATAGTTGTACCAACTATAACATTCTTGTTCTCCGGCATGAATGTAACCCTACCACCAGACAACATCCTCATACATAGCACCGCCGGTAGCACCACATGTTTGGCCATGGCTGGAGCACCCGATAACGTGAACTCGGTGTTGAATGTGATAGCCAACATGCAACAACAAAACCACCGTGTGTTATTTGATGTGCCCAACTCAAGAATTGGTATTGTTCGTGAGCTTTGCACCTAA

Protein sequence

>Msa1188340

MKNPIFLTPFLLCLFISLVQAQTPKCDIQDDGSTLKVFHIFSQCSPFKPSKPMSWEESVLQLEAKDQARMQYLSSLVARKSVVPIASGRQIIQSPTYIVKAKFGTPPQTLLLALDTSSDAAWIPCSGCVGCSTSKPFAPVKSTSFRNVSCGSPQCKQVPNPTCGGSACAFNFTYGSSSIAASVVQDTLTLATDPIPRYTFGCVNKTTGSSAPQQGLLGLGRGPLSLLTQSQNLYKSTFSYCLPSFKSPNFSGSLRLGPVYQPKRIKYTPLLRNPRRSSLYYVNLVAIKVGRKIVDIPPAALAFNPTTGAGTIFDSGTVFTRLAEPVYTAVRNEFRRRVGPKLPVTTLGGFDTCYNVPIVVPTITFLFSGMNVTLPPDNILIHSTAGSTTCLAMAGAPDNVNSVLNVIANMQQQNHRVLFDVPNSRIGIVRELCT*