Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1388960 | XP_003620614.2 | 93.617 | 94 | 6 | 0 | 46 | 139 | 34 | 127 | 5.08e-60 | 191 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1388960 | sp|O02414|DYL1_HELCR | 44.444 | 90 | 48 | 1 | 47 | 136 | 1 | 88 | 7.15e-21 | 83.6 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1388960 | A0A396HHX3 | 93.617 | 94 | 6 | 0 | 46 | 139 | 34 | 127 | 2.43e-60 | 191 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0015140 | Msa1388960 | 0.801945 | 7.085503e-49 | -8.615850e-47 |
| Msa0080830 | Msa1388960 | 0.805442 | 1.332351e-49 | -8.615850e-47 |
| Msa0100160 | Msa1388960 | 0.809206 | 2.121370e-50 | -8.615850e-47 |
| Msa0103250 | Msa1388960 | 0.802595 | 5.206138e-49 | -8.615850e-47 |
| Msa0106620 | Msa1388960 | 0.804158 | 2.470139e-49 | -8.615850e-47 |
| Msa1359560 | Msa1388960 | 0.815315 | 9.846101e-52 | -8.615850e-47 |
| Msa1381480 | Msa1388960 | 0.800864 | 1.179763e-48 | -8.615850e-47 |
| Msa1388960 | Msa1407190 | 0.808000 | 3.839664e-50 | -8.615850e-47 |
| Msa1388960 | Msa1416370 | 0.809091 | 2.245219e-50 | -8.615850e-47 |
| Msa1388960 | Msa1426570 | 0.801643 | 8.173517e-49 | -8.615850e-47 |
| Msa1388960 | Msa1432130 | 0.804079 | 2.565672e-49 | -8.615850e-47 |
| Msa0652690 | Msa1388960 | 0.804077 | 2.568946e-49 | -8.615850e-47 |
| Msa0178510 | Msa1388960 | 0.801883 | 7.297398e-49 | -8.615850e-47 |
| Msa0192640 | Msa1388960 | 0.802249 | 6.134826e-49 | -8.615850e-47 |
| Msa0218350 | Msa1388960 | 0.804432 | 2.166434e-49 | -8.615850e-47 |
| Msa0378970 | Msa1388960 | 0.804234 | 2.382678e-49 | -8.615850e-47 |
| Msa0394690 | Msa1388960 | 0.804986 | 1.660087e-49 | -8.615850e-47 |
| Msa0480780 | Msa1388960 | 0.806260 | 8.966159e-50 | -8.615850e-47 |
| Msa0999860 | Msa1388960 | 0.967761 | 1.003112e-127 | -8.615850e-47 |
| Msa1001990 | Msa1388960 | 0.965831 | 4.068580e-125 | -8.615850e-47 |
| Msa1130530 | Msa1388960 | 0.803876 | 2.827516e-49 | -8.615850e-47 |
| Msa1163540 | Msa1388960 | 0.816929 | 4.292032e-52 | -8.615850e-47 |
| Msa0518440 | Msa1388960 | 0.801950 | 7.069901e-49 | -8.615850e-47 |
| Msa0521670 | Msa1388960 | 0.805478 | 1.309567e-49 | -8.615850e-47 |
| Msa0532980 | Msa1388960 | 0.809153 | 2.177849e-50 | -8.615850e-47 |
| Msa0866400 | Msa1388960 | 0.812367 | 4.394346e-51 | -8.615850e-47 |
| Msa0899990 | Msa1388960 | 0.914825 | 1.216636e-84 | -8.615850e-47 |
| Msa0945240 | Msa1388960 | 0.804862 | 1.761800e-49 | -8.615850e-47 |
| Msa0965370 | Msa1388960 | 0.937074 | 6.251649e-98 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1388960 | MtrunA17_Chr6g0485891 | 93.617 | 94 | 6 | 0 | 46 | 139 | 34 | 127 | 4.67e-64 | 191 |
| Msa1388960 | MtrunA17_Chr2g0331651 | 74.444 | 90 | 23 | 0 | 47 | 136 | 1 | 90 | 9.27e-50 | 154 |
| Msa1388960 | MtrunA17_Chr8g0360861 | 51.087 | 92 | 45 | 0 | 47 | 138 | 1 | 92 | 4.46e-30 | 104 |
| Msa1388960 | MtrunA17_Chr4g0063491 | 45.570 | 79 | 43 | 0 | 57 | 135 | 159 | 237 | 1.15e-19 | 81.6 |
| Msa1388960 | MtrunA17_Chr4g0059791 | 44.444 | 81 | 44 | 1 | 58 | 137 | 222 | 302 | 1.06e-16 | 74.7 |
| Msa1388960 | MtrunA17_Chr8g0391451 | 36.905 | 84 | 51 | 1 | 54 | 135 | 56 | 139 | 2.69e-16 | 70.9 |
| Msa1388960 | MtrunA17_Chr4g0067531 | 36.471 | 85 | 52 | 1 | 51 | 135 | 46 | 128 | 3.01e-16 | 70.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1388960 | AT1G52245.1 | 76.344 | 93 | 22 | 0 | 47 | 139 | 1 | 93 | 9.47e-52 | 159 |
| Msa1388960 | AT3G16120.2 | 72.826 | 92 | 25 | 0 | 47 | 138 | 1 | 92 | 3.47e-47 | 148 |
| Msa1388960 | AT3G16120.1 | 72.826 | 92 | 25 | 0 | 47 | 138 | 1 | 92 | 3.47e-47 | 148 |
| Msa1388960 | AT4G27360.1 | 53.846 | 91 | 42 | 0 | 47 | 137 | 1 | 91 | 1.26e-31 | 108 |
| Msa1388960 | AT5G20110.1 | 46.154 | 78 | 42 | 0 | 58 | 135 | 123 | 200 | 3.12e-18 | 77.4 |
| Msa1388960 | AT4G15930.1 | 38.824 | 85 | 50 | 1 | 51 | 135 | 39 | 121 | 1.93e-17 | 73.6 |
| Msa1388960 | AT1G23220.1 | 36.471 | 85 | 53 | 1 | 54 | 137 | 38 | 122 | 2.68e-17 | 73.2 |
Find 23 sgRNAs with CRISPR-Local
Find 295 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCTTATAGATTAGAAAATTA+AGG | 0.208962 | tig0021200:-65763 | None:intergenic |
| CAGGAGTTTGATAAGAATTA+TGG | 0.245035 | tig0021200:+65653 | Msa1388960:intron |
| TGTGTAGTAGGTTCCAATTT+TGG | 0.285821 | tig0021200:+65689 | Msa1388960:CDS |
| CTTATAGATTAGAAAATTAA+GGG | 0.370499 | tig0021200:-65762 | None:intergenic |
| TGTGATTGTAGATCAATTGC+TGG | 0.417111 | tig0021200:+65065 | Msa1388960:CDS |
| TGTGATTGTAGATCAATTGC+TGG | 0.453871 | tig0021200:+60081 | Msa1388960:CDS |
| TTGATAAGAATTATGGAAGT+GGG | 0.454204 | tig0021200:+65660 | Msa1388960:CDS |
| ATATAAAGGTCCCTGGTGTA+TGG | 0.455885 | tig0021200:-65724 | None:intergenic |
| CTAAAGATGTTGGAAGGAAA+AGG | 0.470654 | tig0021200:+59973 | None:intergenic |
| CTCAAGATGTTGGAAGGAAA+AGG | 0.486434 | tig0021200:+64957 | Msa1388960:intron |
| TTTGATAAGAATTATGGAAG+TGG | 0.490477 | tig0021200:+65659 | Msa1388960:CDS |
| AGTGGGTGGCAATGTGTAGT+AGG | 0.509524 | tig0021200:+65677 | Msa1388960:CDS |
| GCTTGAATTTGCATCTTCAA+AGG | 0.513495 | tig0021200:-60018 | None:intergenic |
| GCTTGAATTTGCATCTTCAA+AGG | 0.513495 | tig0021200:-65002 | None:intergenic |
| GAGCAACTCAAGATGTTGGA+AGG | 0.579416 | tig0021200:+64951 | Msa1388960:intron |
| AAGCAACTAAAGATGTTGGA+AGG | 0.603964 | tig0021200:+59967 | None:intergenic |
| AATTGCTGGTAATATCAAGA+AGG | 0.615321 | tig0021200:+60095 | Msa1388960:CDS |
| ATAAGAATTATGGAAGTGGG+TGG | 0.626217 | tig0021200:+65663 | Msa1388960:CDS |
| AGCTTGAGAAGCAAATGACA+TGG | 0.664039 | tig0021200:-60040 | None:intergenic |
| AGCTTGAGAAGCAAATGACA+TGG | 0.664039 | tig0021200:-65024 | None:intergenic |
| GCTCAAGGAGAACAATCAAG+AGG | 0.668274 | tig0021200:-65792 | None:intergenic |
| GATGTTGGAAGGAAAAGGTG+TGG | 0.730714 | tig0021200:+59978 | None:intergenic |
| GATGTTGGAAGGAAAAGGTG+TGG | 0.758385 | tig0021200:+64962 | Msa1388960:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTATTATTTTTTATTTAAT+AGG | + | tig0021200:65476-65495 | Msa1388960:intron | 0.0% |
| !! | AATAATTAGCATAAATTAAA+AGG | - | tig0021200:60511-60530 | None:intergenic | 10.0% |
| !!! | GTCAATAAAAATAAAAATTT+TGG | + | tig0021200:60603-60622 | Msa1388960:intron | 10.0% |
| !!! | CAATAAAAATAAAAATTTTG+GGG | + | tig0021200:60605-60624 | Msa1388960:intron | 10.0% |
| !! | TTTATATTAGCATATAAAAT+TGG | - | tig0021200:63541-63560 | None:intergenic | 10.0% |
| !! | TATGTGAAAAAAAATAAAAA+TGG | - | tig0021200:63880-63899 | None:intergenic | 10.0% |
| !! | GTTTATAAATACAAATAAAA+TGG | - | tig0021200:63982-64001 | None:intergenic | 10.0% |
| !! | TTCCAATTAATAATTAAATA+AGG | + | tig0021200:65614-65633 | Msa1388960:intron | 10.0% |
| !!! | AACCTTATTTAATTATTAAT+TGG | - | tig0021200:65619-65638 | None:intergenic | 10.0% |
| !! | TGAAAATATTAGAATGAATT+TGG | - | tig0021200:60200-60219 | None:intergenic | 15.0% |
| !! | CTAAACAAATTATTTGTATT+TGG | - | tig0021200:60351-60370 | None:intergenic | 15.0% |
| !!! | CAAATACAAATAATTTGTTT+AGG | + | tig0021200:60349-60368 | Msa1388960:intron | 15.0% |
| !! | TAATTATTTGCAAATGAATT+TGG | + | tig0021200:60523-60542 | Msa1388960:intron | 15.0% |
| !! | GTAGCTAAAAAAATATTATT+GGG | + | tig0021200:60551-60570 | Msa1388960:intron | 15.0% |
| !! | TAGCTAAAAAAATATTATTG+GGG | + | tig0021200:60552-60571 | Msa1388960:intron | 15.0% |
| !!! | TTTATTTTTATTGACTCATT+AGG | - | tig0021200:60598-60617 | None:intergenic | 15.0% |
| !! | ATTAAACTATATCATATCTA+AGG | + | tig0021200:62186-62205 | Msa1388960:intron | 15.0% |
| !! | GTGAAAAATTGTAATATATT+TGG | + | tig0021200:62273-62292 | Msa1388960:intron | 15.0% |
| !!! | AAACTAAAAACTTTTTTTAG+AGG | + | tig0021200:63493-63512 | Msa1388960:intron | 15.0% |
| !! | TGAAAAAAAATAAAAATGGT+TGG | - | tig0021200:63876-63895 | None:intergenic | 15.0% |
| !! | TTATTCAAGAATAACAAAAT+TGG | + | tig0021200:64190-64209 | Msa1388960:intron | 15.0% |
| !! | TATATCCTTATCAAAAAATT+CGG | + | tig0021200:64755-64774 | Msa1388960:intron | 15.0% |
| !! | AATATTTAAATTGAACTTTG+CGG | - | tig0021200:65366-65385 | None:intergenic | 15.0% |
| !! | AATTTAAATATTCCAAAACA+TGG | + | tig0021200:65374-65393 | Msa1388960:intron | 15.0% |
| !! | ATTTAAATATTCCAAAACAT+GGG | + | tig0021200:65375-65394 | Msa1388960:intron | 15.0% |
| !!! | TTTTTTATTTAATAGGATGA+AGG | + | tig0021200:65483-65502 | Msa1388960:intron | 15.0% |
| !!! | TTTTTATTTAATAGGATGAA+GGG | + | tig0021200:65484-65503 | Msa1388960:intron | 15.0% |
| !! | CTTATAGATTAGAAAATTAA+GGG | - | tig0021200:65765-65784 | None:intergenic | 15.0% |
| !!! | CTTAATTTTCTAATCTATAA+GGG | + | tig0021200:65764-65783 | Msa1388960:CDS | 15.0% |
| !!! | GAAAATCACTCAATTTTTTT+GGG | - | tig0021200:60161-60180 | None:intergenic | 20.0% |
| !! | AATGTACAATTAGTATAAAC+AGG | - | tig0021200:60284-60303 | None:intergenic | 20.0% |
| !! | GGTAGCTAAAAAAATATTAT+TGG | + | tig0021200:60550-60569 | Msa1388960:intron | 20.0% |
| !!! | TTTAACTAATAATTTTGTCC+TGG | + | tig0021200:60876-60895 | Msa1388960:intron | 20.0% |
| !! | ATTTGAATAGAATGGATAAA+TGG | + | tig0021200:60938-60957 | Msa1388960:intron | 20.0% |
| !!! | TTCATGTTTTACTTGAATTT+GGG | - | tig0021200:61128-61147 | None:intergenic | 20.0% |
| !!! | TTTCATGTTTTACTTGAATT+TGG | - | tig0021200:61129-61148 | None:intergenic | 20.0% |
| !! | AGTAGATAATGAAAAGTAAA+TGG | + | tig0021200:61164-61183 | Msa1388960:intron | 20.0% |
| !! | TATTATTCGTTATAATCTAG+TGG | - | tig0021200:61621-61640 | None:intergenic | 20.0% |
| !! | TGAATAAAAATCTTTGTCAT+TGG | - | tig0021200:61943-61962 | None:intergenic | 20.0% |
| !!! | TGATTGAAGTTTGTATATTT+TGG | - | tig0021200:62378-62397 | None:intergenic | 20.0% |
| !!! | TTTTTAACTGAAACATGAAT+TGG | - | tig0021200:62545-62564 | None:intergenic | 20.0% |
| !! | AAGCTGAAAATAAACTATAA+AGG | + | tig0021200:62629-62648 | Msa1388960:intron | 20.0% |
| !!! | CCACAAATTATATTTTTTAG+AGG | - | tig0021200:63302-63321 | None:intergenic | 20.0% |
| !!! | CCTCTAAAAAATATAATTTG+TGG | + | tig0021200:63299-63318 | Msa1388960:intron | 20.0% |
| !! | TGCTTATGAAAAATAATTGA+AGG | + | tig0021200:63412-63431 | Msa1388960:intron | 20.0% |
| !! | TAATATAAATTAACCCATCT+GGG | + | tig0021200:63552-63571 | Msa1388960:intron | 20.0% |
| !!! | TAGTAATTGACTTAAGATTT+TGG | + | tig0021200:63581-63600 | Msa1388960:intron | 20.0% |
| !!! | GATTCATGACTATATTTTAA+TGG | + | tig0021200:63954-63973 | Msa1388960:intron | 20.0% |
| !!! | TTTGAAAAGGTATGTAATAA+GGG | - | tig0021200:64084-64103 | None:intergenic | 20.0% |
| !!! | TTTTGAAAAGGTATGTAATA+AGG | - | tig0021200:64085-64104 | None:intergenic | 20.0% |
| !!! | ATCACACTAAAATTTTGAAA+AGG | - | tig0021200:64097-64116 | None:intergenic | 20.0% |
| !! | TGTTATTCTTGAATAAACTT+TGG | - | tig0021200:64186-64205 | None:intergenic | 20.0% |
| !!! | ATTTTTTTTTCTCTTCAAAG+TGG | - | tig0021200:64655-64674 | None:intergenic | 20.0% |
| !! | ATATCCTTATCAAAAAATTC+GGG | + | tig0021200:64756-64775 | Msa1388960:intron | 20.0% |
| !! | TTGAATTGAATGAATGATTA+AGG | - | tig0021200:64813-64832 | None:intergenic | 20.0% |
| !! | ATCATTCATTCAATTCAAAA+TGG | + | tig0021200:64815-64834 | Msa1388960:intron | 20.0% |
| !! | GGAAAATAACTCAAATTTAA+GGG | - | tig0021200:65141-65160 | None:intergenic | 20.0% |
| !! | TGGAAAATAACTCAAATTTA+AGG | - | tig0021200:65142-65161 | None:intergenic | 20.0% |
| !! | GAAAATATTAGAGATGAATT+TGG | - | tig0021200:65179-65198 | None:intergenic | 20.0% |
| !!! | TATTTTATGAGTTTGAAGTT+TGG | + | tig0021200:65585-65604 | Msa1388960:intron | 20.0% |
| !! | TAATTAAATAAGGTTGTGTT+TGG | + | tig0021200:65624-65643 | Msa1388960:intron | 20.0% |
| !! | CTCAAGAGAAAAATATATAA+AGG | - | tig0021200:65741-65760 | None:intergenic | 20.0% |
| !! | CCTTATAGATTAGAAAATTA+AGG | - | tig0021200:65766-65785 | None:intergenic | 20.0% |
| !!! | CCTTAATTTTCTAATCTATA+AGG | + | tig0021200:65763-65782 | Msa1388960:CDS | 20.0% |
| !!! | GGAAAATCACTCAATTTTTT+TGG | - | tig0021200:60162-60181 | None:intergenic | 25.0% |
| ! | TGAATTTGGATTTATGAGAT+TGG | - | tig0021200:60186-60205 | None:intergenic | 25.0% |
| ! | ACTAATTGTACATTTCTTTG+TGG | + | tig0021200:60290-60309 | Msa1388960:intron | 25.0% |
| ! | AAATTGTGTTGTGAGTAAAT+AGG | - | tig0021200:60735-60754 | None:intergenic | 25.0% |
| ! | TTTCTATTCAATAAAGCAAG+AGG | + | tig0021200:60851-60870 | Msa1388960:intron | 25.0% |
| ! | ATTCTATTCAAATGAACAAG+AGG | - | tig0021200:60931-60950 | None:intergenic | 25.0% |
| ! | TCTTGTTCATTTGAATAGAA+TGG | + | tig0021200:60930-60949 | Msa1388960:intron | 25.0% |
| ! | TCTTGTTCATTTGAATAGAA+CGG | + | tig0021200:60930-60949 | Msa1388960:intron | 25.0% |
| ! | AAAGTAAAAGGTGATTTACT+AGG | - | tig0021200:61041-61060 | None:intergenic | 25.0% |
| !! | AGTAAATCACCTTTTACTTT+AGG | + | tig0021200:61041-61060 | Msa1388960:intron | 25.0% |
| !! | TCATGTTTTACTTGAATTTG+GGG | - | tig0021200:61127-61146 | None:intergenic | 25.0% |
| ! | TAAATGGCTCAGAAAATAAT+GGG | + | tig0021200:61180-61199 | Msa1388960:intron | 25.0% |
| ! | AAAATCATCATACAAGAAGT+TGG | + | tig0021200:61346-61365 | Msa1388960:intron | 25.0% |
| !!! | ATGATGTTATTTTCCTTCTT+TGG | - | tig0021200:61381-61400 | None:intergenic | 25.0% |
| ! | CAATGTATCATCATATTCAT+TGG | + | tig0021200:61449-61468 | Msa1388960:intron | 25.0% |
| ! | CATATTCATTGGATAATTAC+AGG | + | tig0021200:61460-61479 | Msa1388960:intron | 25.0% |
| !! | TGGTTTGTATAATGTATCAA+TGG | - | tig0021200:61594-61613 | None:intergenic | 25.0% |
| ! | AGCCTTAAATTTATCATCAT+CGG | + | tig0021200:61756-61775 | Msa1388960:intron | 25.0% |
| !! | ATGTGTTTTGTGTCAAATTT+TGG | - | tig0021200:62168-62187 | None:intergenic | 25.0% |
| ! | ACTATAAAGGTAAAATCAAG+AGG | + | tig0021200:62642-62661 | Msa1388960:intron | 25.0% |
| ! | TATTCTTCAATTACCATCTT+AGG | - | tig0021200:62678-62697 | None:intergenic | 25.0% |
| ! | AAGATGGTAATTGAAGAATA+TGG | + | tig0021200:62678-62697 | Msa1388960:intron | 25.0% |
| !! | TAGAATTATTGGTGTTTGAT+AGG | - | tig0021200:62765-62784 | None:intergenic | 25.0% |
| ! | ACCAATAATTCTACGAAATT+AGG | + | tig0021200:62772-62791 | Msa1388960:intron | 25.0% |
| ! | TCCTAATTTCGTAGAATTAT+TGG | - | tig0021200:62776-62795 | None:intergenic | 25.0% |
| ! | GATTTATAGAGTTGAGTTTA+GGG | + | tig0021200:62842-62861 | Msa1388960:intron | 25.0% |
| ! | GAACAAAATTTAACTGTCAT+TGG | + | tig0021200:63133-63152 | Msa1388960:intron | 25.0% |
| ! | CTAATATAAATTAACCCATC+TGG | + | tig0021200:63551-63570 | Msa1388960:intron | 25.0% |
| ! | AAAACTATAGACTATGTGTA+CGG | - | tig0021200:63748-63767 | None:intergenic | 25.0% |
| ! | CTAAGAATAATCATTTGAGT+TGG | - | tig0021200:64020-64039 | None:intergenic | 25.0% |
| ! | TTCTTGAATAAACTTTGGAT+CGG | - | tig0021200:64181-64200 | None:intergenic | 25.0% |
| !! | TTGATCATGTTTTACTAAGA+GGG | - | tig0021200:64387-64406 | None:intergenic | 25.0% |
| !! | TTTGATCATGTTTTACTAAG+AGG | - | tig0021200:64388-64407 | None:intergenic | 25.0% |
| ! | GAAAAGGTAACATCAATATT+TGG | + | tig0021200:64469-64488 | Msa1388960:intron | 25.0% |
| ! | GAATGAATGATTAAGGAATT+TGG | - | tig0021200:64806-64825 | None:intergenic | 25.0% |
| ! | CAATAACAATAGAGAGAATT+TGG | + | tig0021200:64898-64917 | Msa1388960:intron | 25.0% |
| ! | TGAATTTGGATTTATGAGAT+TGG | - | tig0021200:60186-60205 | None:intergenic | 25.0% |
| !! | TTGAATTTATACCCATGTTT+TGG | - | tig0021200:65389-65408 | None:intergenic | 25.0% |
| !!! | CTATTTTTAGTATGACGAAT+CGG | + | tig0021200:65428-65447 | Msa1388960:intron | 25.0% |
| ! | ATTATCCTAACATTTGACTA+TGG | + | tig0021200:65547-65566 | Msa1388960:intron | 25.0% |
| ! | AAAAACCATAGTCAAATGTT+AGG | - | tig0021200:65555-65574 | None:intergenic | 25.0% |
| ! | TTTGATAAGAATTATGGAAG+TGG | + | tig0021200:65659-65678 | Msa1388960:CDS | 25.0% |
| ! | TTGATAAGAATTATGGAAGT+GGG | + | tig0021200:65660-65679 | Msa1388960:CDS | 25.0% |
| AATTGCTGGTAATATCAAGA+AGG | + | tig0021200:60095-60114 | Msa1388960:CDS | 30.0% | |
| ATTTGGATTTATGAGATTGG+TGG | - | tig0021200:60183-60202 | None:intergenic | 30.0% | |
| ! | AAGCTAGAGAAATTTTTACG+AGG | + | tig0021200:60322-60341 | Msa1388960:intron | 30.0% |
| ! | AGCTAGAGAAATTTTTACGA+GGG | + | tig0021200:60323-60342 | Msa1388960:intron | 30.0% |
| TTTGCAAATGAATTTGGTTG+AGG | + | tig0021200:60529-60548 | Msa1388960:intron | 30.0% | |
| GAATATTACGAAGATTCTTG+AGG | - | tig0021200:60682-60701 | None:intergenic | 30.0% | |
| ! | ACAATCCTTTGTTTCTCATA+TGG | + | tig0021200:60760-60779 | Msa1388960:intron | 30.0% |
| ! | CAATCCTTTGTTTCTCATAT+GGG | + | tig0021200:60761-60780 | Msa1388960:intron | 30.0% |
| TTCTTAATCTACCTTCTCAT+TGG | + | tig0021200:60995-61014 | Msa1388960:intron | 30.0% | |
| GTAAATGGCTCAGAAAATAA+TGG | + | tig0021200:61179-61198 | Msa1388960:intron | 30.0% | |
| TTCACTGAAATTGTGCATAT+CGG | + | tig0021200:61509-61528 | Msa1388960:intron | 30.0% | |
| ACATACATAAGACACTAGAT+TGG | + | tig0021200:61549-61568 | Msa1388960:intron | 30.0% | |
| GACCGATGATGATAAATTTA+AGG | - | tig0021200:61761-61780 | None:intergenic | 30.0% | |
| CTAATCTAATCTTCTCAATG+AGG | - | tig0021200:62299-62318 | None:intergenic | 30.0% | |
| ACCAACAATGAAAAATCAAG+AGG | + | tig0021200:62422-62441 | Msa1388960:intron | 30.0% | |
| ! | TCCTCTTGATTTTTCATTGT+TGG | - | tig0021200:62426-62445 | None:intergenic | 30.0% |
| ! | ACATTGATGATATCTGTGAT+AGG | - | tig0021200:62522-62541 | None:intergenic | 30.0% |
| AGGAATTGAAAAACCTAAGA+TGG | + | tig0021200:62662-62681 | Msa1388960:intron | 30.0% | |
| CATATCATATTGATGCGAAT+TGG | - | tig0021200:62723-62742 | None:intergenic | 30.0% | |
| GGATTTATAGAGTTGAGTTT+AGG | + | tig0021200:62841-62860 | Msa1388960:intron | 30.0% | |
| ! | GATTTCAAGAGTATAGTAAC+CGG | + | tig0021200:62916-62935 | Msa1388960:intron | 30.0% |
| ! | ATTTCAAGAGTATAGTAACC+GGG | + | tig0021200:62917-62936 | Msa1388960:intron | 30.0% |
| !!! | CCACTAACGTTTTTTCTTTT+GGG | - | tig0021200:62953-62972 | None:intergenic | 30.0% |
| !!! | ACCACTAACGTTTTTTCTTT+TGG | - | tig0021200:62954-62973 | None:intergenic | 30.0% |
| AAGAAAAAACGTTAGTGGTA+AGG | + | tig0021200:62955-62974 | Msa1388960:intron | 30.0% | |
| AGAAAAAACGTTAGTGGTAA+GGG | + | tig0021200:62956-62975 | Msa1388960:intron | 30.0% | |
| ! | TTTTGCTCTGACTTTTAACA+GGG | + | tig0021200:63638-63657 | Msa1388960:intron | 30.0% |
| AGATTCATCAGTGTTTGAAT+CGG | + | tig0021200:63688-63707 | Msa1388960:intron | 30.0% | |
| TAATTCTATACCATGTGACA+TGG | + | tig0021200:63901-63920 | Msa1388960:intron | 30.0% | |
| !! | GAATAATCATTTGAGTTGGA+GGG | - | tig0021200:64016-64035 | None:intergenic | 30.0% |
| !! | AGAATAATCATTTGAGTTGG+AGG | - | tig0021200:64017-64036 | None:intergenic | 30.0% |
| ! | ACAAAATTGGTTAGAAGTAC+TGG | + | tig0021200:64203-64222 | Msa1388960:intron | 30.0% |
| ATCTATCAACTTGTCTAAAG+TGG | - | tig0021200:64323-64342 | None:intergenic | 30.0% | |
| TCATAGACAAAAGAATTGAC+CGG | - | tig0021200:64516-64535 | None:intergenic | 30.0% | |
| !!! | GTAACCCGAATTTTTTGATA+AGG | - | tig0021200:64763-64782 | None:intergenic | 30.0% |
| !!! | AATTGCTGGTTTTATCAAGA+AGG | + | tig0021200:65079-65098 | Msa1388960:CDS | 30.0% |
| ATTTGGATTTATGAGATTGG+TGG | - | tig0021200:60183-60202 | None:intergenic | 30.0% | |
| TGTTGAAATTTCAACGAGTT+CGG | - | tig0021200:65222-65241 | None:intergenic | 30.0% | |
| CGATTCGTCATACTAAAAAT+AGG | - | tig0021200:65430-65449 | None:intergenic | 30.0% | |
| TAATAGGATGAAGGGTAATT+AGG | + | tig0021200:65492-65511 | Msa1388960:intron | 30.0% | |
| AATAGGATGAAGGGTAATTA+GGG | + | tig0021200:65493-65512 | Msa1388960:intron | 30.0% | |
| ! | TATGAGTTTGAAGTTTGGTT+TGG | + | tig0021200:65590-65609 | Msa1388960:intron | 30.0% |
| CAGGAGTTTGATAAGAATTA+TGG | + | tig0021200:65653-65672 | Msa1388960:intron | 30.0% | |
| GAAAAATATATAAAGGTCCC+TGG | - | tig0021200:65734-65753 | None:intergenic | 30.0% | |
| GCTTGAATTTGCATCTTCAA+AGG | - | tig0021200:60021-60040 | None:intergenic | 35.0% | |
| TGTGATTGTAGATCAATTGC+TGG | + | tig0021200:60081-60100 | Msa1388960:CDS | 35.0% | |
| CCATGGATACAAAAGTTTGT+TGG | - | tig0021200:60257-60276 | None:intergenic | 35.0% | |
| ! | CCAACAAACTTTTGTATCCA+TGG | + | tig0021200:60254-60273 | Msa1388960:intron | 35.0% |
| TAGTATAAACAGGAGATCCA+TGG | - | tig0021200:60274-60293 | None:intergenic | 35.0% | |
| ! | GCTAGAGAAATTTTTACGAG+GGG | + | tig0021200:60324-60343 | Msa1388960:intron | 35.0% |
| ! | CTAGAGAAATTTTTACGAGG+GGG | + | tig0021200:60325-60344 | Msa1388960:intron | 35.0% |
| GTAACCCATATGAGAAACAA+AGG | - | tig0021200:60768-60787 | None:intergenic | 35.0% | |
| ATAACGAATAGAATGACCAG+AGG | - | tig0021200:60794-60813 | None:intergenic | 35.0% | |
| ! | TCACCTTTTACTTTAGGCTT+TGG | + | tig0021200:61047-61066 | Msa1388960:intron | 35.0% |
| CATCCAAAGCCTAAAGTAAA+AGG | - | tig0021200:61053-61072 | None:intergenic | 35.0% | |
| TTGGCATTAACATCCAAAGA+AGG | + | tig0021200:61365-61384 | Msa1388960:intron | 35.0% | |
| CGTTATAATCTAGTGGCTTA+TGG | - | tig0021200:61614-61633 | None:intergenic | 35.0% | |
| !!! | TATGCTGTTTTATCCTTCCT+TGG | - | tig0021200:62027-62046 | None:intergenic | 35.0% |
| TGTCTGTGATGATATCTTGA+AGG | - | tig0021200:62114-62133 | None:intergenic | 35.0% | |
| AATCAAGAGGACTCAGAATA+TGG | + | tig0021200:62435-62454 | Msa1388960:intron | 35.0% | |
| ATCAAGAGGACTCAGAATAT+GGG | + | tig0021200:62436-62455 | Msa1388960:intron | 35.0% | |
| TGGTGATATAACAGAATGGT+CGG | + | tig0021200:62459-62478 | Msa1388960:intron | 35.0% | |
| CCCAAAAGAAAAAACGTTAG+TGG | + | tig0021200:62950-62969 | Msa1388960:intron | 35.0% | |
| ATAAATTAACCCATCTGGGT+TGG | + | tig0021200:63556-63575 | Msa1388960:intron | 35.0% | |
| ! | GTTTTGCTCTGACTTTTAAC+AGG | + | tig0021200:63637-63656 | Msa1388960:intron | 35.0% |
| ! | TTTGCTCTGACTTTTAACAG+GGG | + | tig0021200:63639-63658 | Msa1388960:intron | 35.0% |
| !! | CATAGTCTATAGTTTTGCCT+TGG | + | tig0021200:63752-63771 | Msa1388960:intron | 35.0% |
| !! | CAAATAAGATTAGCTCTAGC+AGG | - | tig0021200:63816-63835 | None:intergenic | 35.0% |
| TCTGCTTAACCCACTAAAAA+TGG | + | tig0021200:64263-64282 | Msa1388960:intron | 35.0% | |
| !!! | CTCATCGTTCCATTTTTAGT+GGG | - | tig0021200:64275-64294 | None:intergenic | 35.0% |
| !! | TCTCATCGTTCCATTTTTAG+TGG | - | tig0021200:64276-64295 | None:intergenic | 35.0% |
| ACTTGTACCAGGATAAGAAA+AGG | + | tig0021200:64453-64472 | Msa1388960:intron | 35.0% | |
| ! | GATGTTACCTTTTCTTATCC+TGG | - | tig0021200:64463-64482 | None:intergenic | 35.0% |
| CATAGACAAAAGAATTGACC+GGG | - | tig0021200:64515-64534 | None:intergenic | 35.0% | |
| !!! | TTATTTTGACCAGTGGAGAA+AGG | - | tig0021200:64623-64642 | None:intergenic | 35.0% |
| TTAAGGAATTTGGCAGCTTA+TGG | - | tig0021200:64796-64815 | None:intergenic | 35.0% | |
| GCTTGAATTTGCATCTTCAA+AGG | - | tig0021200:60021-60040 | None:intergenic | 35.0% | |
| TGTGATTGTAGATCAATTGC+TGG | + | tig0021200:60081-60100 | Msa1388960:CDS | 35.0% | |
| TAGCAAAGTTGAATTTGAGC+TGG | - | tig0021200:65328-65347 | None:intergenic | 35.0% | |
| AGGGTAATTAGGGAAATTCA+TGG | + | tig0021200:65503-65522 | Msa1388960:intron | 35.0% | |
| ! | AGGGAAATTCATGGTTTTTG+TGG | + | tig0021200:65512-65531 | Msa1388960:intron | 35.0% |
| ! | ATTCATGGTTTTTGTGGTGT+AGG | + | tig0021200:65518-65537 | Msa1388960:intron | 35.0% |
| !!! | AGGTTGTGTTTGGTTTTTTC+AGG | + | tig0021200:65634-65653 | Msa1388960:intron | 35.0% |
| ATAAGAATTATGGAAGTGGG+TGG | + | tig0021200:65663-65682 | Msa1388960:CDS | 35.0% | |
| ! | TGTGTAGTAGGTTCCAATTT+TGG | + | tig0021200:65689-65708 | Msa1388960:CDS | 35.0% |
| ! | GTGTAGTAGGTTCCAATTTT+GGG | + | tig0021200:65690-65709 | Msa1388960:CDS | 35.0% |
| !! | GCTAAAAAAGCACCCAAAAT+TGG | - | tig0021200:65705-65724 | None:intergenic | 35.0% |
| AGCTTGAGAAGCAAATGACA+TGG | - | tig0021200:60043-60062 | None:intergenic | 40.0% | |
| GTACATTTCTTTGTGGACAG+CGG | + | tig0021200:60297-60316 | Msa1388960:intron | 40.0% | |
| ! | TCATATGGGTTACAAACCTC+TGG | + | tig0021200:60775-60794 | Msa1388960:intron | 40.0% |
| AATTAGACCTCAGACATCCA+AGG | + | tig0021200:61653-61672 | Msa1388960:intron | 40.0% | |
| AATGCTGCTATATCCTTCCT+TGG | - | tig0021200:61673-61692 | None:intergenic | 40.0% | |
| GTTTCTCAAAACATTCGCAG+TGG | - | tig0021200:61735-61754 | None:intergenic | 40.0% | |
| GTTTCTCAAAACATTCGCAG+TGG | - | tig0021200:61735-61754 | None:intergenic | 40.0% | |
| TGGGTGGTGATATAACAGAA+TGG | + | tig0021200:62455-62474 | Msa1388960:intron | 40.0% | |
| ATATAACAGAATGGTCGGCA+AGG | + | tig0021200:62464-62483 | Msa1388960:intron | 40.0% | |
| TGAGTGAATTTGTGAAGGTG+AGG | + | tig0021200:62814-62833 | Msa1388960:intron | 40.0% | |
| GAGTGAATTTGTGAAGGTGA+GGG | + | tig0021200:62815-62834 | Msa1388960:intron | 40.0% | |
| AATTTGTGAAGGTGAGGGTT+AGG | + | tig0021200:62820-62839 | Msa1388960:intron | 40.0% | |
| ! | TATAGTAACCGGGTTGAGTT+TGG | + | tig0021200:62927-62946 | Msa1388960:intron | 40.0% |
| GTAAGGGCTTTCTCATATGT+GGG | + | tig0021200:62972-62991 | Msa1388960:intron | 40.0% | |
| GAACAGCGTTTAACTGTCAT+TGG | - | tig0021200:63089-63108 | None:intergenic | 40.0% | |
| ATTACTAGTCCAACCCAGAT+GGG | - | tig0021200:63568-63587 | None:intergenic | 40.0% | |
| AATTACTAGTCCAACCCAGA+TGG | - | tig0021200:63569-63588 | None:intergenic | 40.0% | |
| !! | GTCTATAGTTTTGCCTTGGT+TGG | + | tig0021200:63756-63775 | Msa1388960:intron | 40.0% |
| CTCTAACACCTGAGTTCTTA+AGG | - | tig0021200:63783-63802 | None:intergenic | 40.0% | |
| !! | ATAAGATTAGCTCTAGCAGG+AGG | - | tig0021200:63813-63832 | None:intergenic | 40.0% |
| CAGATCAACTTGAGTGGTAA+TGG | - | tig0021200:64242-64261 | None:intergenic | 40.0% | |
| GTGGAAAGAGCAAACTAGAT+AGG | - | tig0021200:64304-64323 | None:intergenic | 40.0% | |
| TCCAAATTCACACTTGTACC+AGG | + | tig0021200:64442-64461 | Msa1388960:intron | 40.0% | |
| TCCTGGTACAAGTGTGAATT+TGG | - | tig0021200:64446-64465 | None:intergenic | 40.0% | |
| TACCATAATCCTTTCTCCAC+TGG | + | tig0021200:64611-64630 | Msa1388960:intron | 40.0% | |
| !!! | CATGGTCTTATTTTGACCAG+TGG | - | tig0021200:64630-64649 | None:intergenic | 40.0% |
| TTTCTCTTCAAAGTGGAGCA+TGG | - | tig0021200:64648-64667 | None:intergenic | 40.0% | |
| AAGAGAGCAACTCAAGATGT+TGG | + | tig0021200:64947-64966 | Msa1388960:intron | 40.0% | |
| AGCTTGAGAAGCAAATGACA+TGG | - | tig0021200:60043-60062 | None:intergenic | 40.0% | |
| !!! | TGCTTTTTTAGCCATACACC+AGG | + | tig0021200:65713-65732 | Msa1388960:CDS | 40.0% |
| !!! | GCTTTTTTAGCCATACACCA+GGG | + | tig0021200:65714-65733 | Msa1388960:CDS | 40.0% |
| ATATAAAGGTCCCTGGTGTA+TGG | - | tig0021200:65727-65746 | None:intergenic | 40.0% | |
| TGTTGGAATCTCAGCGAGTT+CGG | - | tig0021200:60240-60259 | None:intergenic | 45.0% | |
| TTGAAAGGATGGGGTAGCTT+TGG | - | tig0021200:60634-60653 | None:intergenic | 45.0% | |
| AAGCTACCCCATCCTTTCAA+AGG | + | tig0021200:60634-60653 | Msa1388960:intron | 45.0% | |
| AGCTACCCCATCCTTTCAAA+GGG | + | tig0021200:60635-60654 | Msa1388960:intron | 45.0% | |
| ! | CGATTCCCTTTGAAAGGATG+GGG | - | tig0021200:60643-60662 | None:intergenic | 45.0% |
| ! | GCGATTCCCTTTGAAAGGAT+GGG | - | tig0021200:60644-60663 | None:intergenic | 45.0% |
| ! | TCTTGAGGTGTCCACAAACA+GGG | - | tig0021200:60667-60686 | None:intergenic | 45.0% |
| ! | TTCTTGAGGTGTCCACAAAC+AGG | - | tig0021200:60668-60687 | None:intergenic | 45.0% |
| GACATACTTTCTTCAGCACC+AGG | - | tig0021200:60897-60916 | None:intergenic | 45.0% | |
| ATCTACCTTCTCATTGGCGT+TGG | + | tig0021200:61001-61020 | Msa1388960:intron | 45.0% | |
| AAACACCAACGCCAATGAGA+AGG | - | tig0021200:61009-61028 | None:intergenic | 45.0% | |
| ! | TCAGCACTGAAACATCAGAG+TGG | + | tig0021200:61216-61235 | Msa1388960:intron | 45.0% |
| ! | ACATCATTAGCTCTCAAGCC+TGG | + | tig0021200:61394-61413 | Msa1388960:intron | 45.0% |
| TATCCTTCCTTGGATGTCTG+AGG | - | tig0021200:61663-61682 | None:intergenic | 45.0% | |
| ATCGTTGTCTCAGACATCCA+AGG | + | tig0021200:62007-62026 | Msa1388960:intron | 45.0% | |
| TTGTCTCAGACATCCAAGGA+AGG | + | tig0021200:62011-62030 | Msa1388960:intron | 45.0% | |
| ACAGCATAAACTCTCAAGCC+TGG | + | tig0021200:62039-62058 | Msa1388960:intron | 45.0% | |
| AAGAGGACTCAGAATATGGG+TGG | + | tig0021200:62439-62458 | Msa1388960:intron | 45.0% | |
| ATAGGTCTCGTTCGTCGTAA+TGG | - | tig0021200:62504-62523 | None:intergenic | 45.0% | |
| GCAGCTGAGTGAATTTGTGA+AGG | + | tig0021200:62809-62828 | Msa1388960:intron | 45.0% | |
| CATACGCGTAGGTTAATTCG+CGG | - | tig0021200:62896-62915 | None:intergenic | 45.0% | |
| CTCTTGAAATCCATACGCGT+AGG | - | tig0021200:62907-62926 | None:intergenic | 45.0% | |
| GGTAAGGGCTTTCTCATATG+TGG | + | tig0021200:62971-62990 | Msa1388960:intron | 45.0% | |
| GAGTTCTTAAGGACCAACCA+AGG | - | tig0021200:63772-63791 | None:intergenic | 45.0% | |
| ! | TGGTTGGTCCTTAAGAACTC+AGG | + | tig0021200:63772-63791 | Msa1388960:intron | 45.0% |
| GCAGATCAGATCAACTTGAG+TGG | - | tig0021200:64248-64267 | None:intergenic | 45.0% | |
| AAAAGAATTGACCGGGTGGT+TGG | - | tig0021200:64508-64527 | None:intergenic | 45.0% | |
| AGACAAAAGAATTGACCGGG+TGG | - | tig0021200:64512-64531 | None:intergenic | 45.0% | |
| GACCAGTGGAGAAAGGATTA+TGG | - | tig0021200:64616-64635 | None:intergenic | 45.0% | |
| GAGCAACTCAAGATGTTGGA+AGG | + | tig0021200:64951-64970 | Msa1388960:intron | 45.0% | |
| GTATGACGAATCGGAAGTCA+TGG | + | tig0021200:65437-65456 | Msa1388960:intron | 45.0% | |
| !!! | TCAATAAAAATAAAAATTTT+GGG | + | tig0021200:60604-60623 | Msa1388960:intron | 5.0% |
| !!! | AAAGTTAATTAAAATTTTAT+TGG | - | tig0021200:61271-61290 | None:intergenic | 5.0% |
| !!! | ATTTTAAATATTATAATCAT+TGG | + | tig0021200:62352-62371 | Msa1388960:intron | 5.0% |
| !!! | TTTTTTAAAGATTTTAAATT+CGG | - | tig0021200:63717-63736 | None:intergenic | 5.0% |
| ! | GGCGATTCCCTTTGAAAGGA+TGG | - | tig0021200:60645-60664 | None:intergenic | 50.0% |
| ! | CTTGAGGTGTCCACAAACAG+GGG | - | tig0021200:60666-60685 | None:intergenic | 50.0% |
| ! | TTAGCTCTCAAGCCTGGCAA+AGG | + | tig0021200:61400-61419 | Msa1388960:intron | 50.0% |
| CATTTGCCTTTGCCTTTGCC+AGG | - | tig0021200:61415-61434 | None:intergenic | 50.0% | |
| AGACCTCAGACATCCAAGGA+AGG | + | tig0021200:61657-61676 | Msa1388960:intron | 50.0% | |
| GCAGCATTAACTCTCAAGCC+TGG | + | tig0021200:61685-61704 | Msa1388960:intron | 50.0% | |
| TAACTCTCAAGCCTGGCGAA+AGG | + | tig0021200:61692-61711 | Msa1388960:intron | 50.0% | |
| AAGAACTTTCGCCTTTCGCC+AGG | - | tig0021200:61706-61725 | None:intergenic | 50.0% | |
| TGGCGAAAGGCGAAAGTTCT+TGG | + | tig0021200:61705-61724 | Msa1388960:intron | 50.0% | |
| GGCGAAAGGCGAAAGTTCTT+GGG | + | tig0021200:61706-61725 | Msa1388960:intron | 50.0% | |
| GAAAGGCGAAAGTTCTTGGG+CGG | + | tig0021200:61709-61728 | Msa1388960:intron | 50.0% | |
| TAAACTCTCAAGCCTGGCGA+AGG | + | tig0021200:62045-62064 | Msa1388960:intron | 50.0% | |
| TAAGAACTTTCGCCTTCGCC+AGG | - | tig0021200:62060-62079 | None:intergenic | 50.0% | |
| TGGCGAAGGCGAAAGTTCTT+AGG | + | tig0021200:62059-62078 | Msa1388960:intron | 50.0% | |
| CGAAGGCGAAAGTTCTTAGG+CGG | + | tig0021200:62062-62081 | Msa1388960:intron | 50.0% | |
| TTAATTCGCGGCGCAACTCT+TGG | - | tig0021200:62884-62903 | None:intergenic | 50.0% | |
| CGCGAATTAACCTACGCGTA+TGG | + | tig0021200:62894-62913 | Msa1388960:intron | 50.0% | |
| ! | CTTTTGGGCCAAACTCAACC+CGG | - | tig0021200:62938-62957 | None:intergenic | 50.0% |
| ! | TGACTTTTAACAGGGGCCCT+GGG | + | tig0021200:63646-63665 | Msa1388960:intron | 50.0% |
| TCAGTCAATCCTACAGCCCA+GGG | - | tig0021200:63665-63684 | None:intergenic | 50.0% | |
| ATCAGTCAATCCTACAGCCC+AGG | - | tig0021200:63666-63685 | None:intergenic | 50.0% | |
| CGTACACGAGTTCGATTACG+AGG | - | tig0021200:64421-64440 | None:intergenic | 50.0% | |
| AGTGGGTGGCAATGTGTAGT+AGG | + | tig0021200:65677-65696 | Msa1388960:CDS | 50.0% | |
| CAGGGGCGATTCCCTTTGAA+AGG | - | tig0021200:60649-60668 | None:intergenic | 55.0% | |
| AAGGGAATCGCCCCTGTTTG+TGG | + | tig0021200:60653-60672 | Msa1388960:intron | 55.0% | |
| CTCAAGCCTGGCAAAGGCAA+AGG | + | tig0021200:61406-61425 | Msa1388960:intron | 55.0% | |
| ! | CTGACTTTTAACAGGGGCCC+TGG | + | tig0021200:63645-63664 | Msa1388960:intron | 55.0% |
| ATGTGACATGGCCTCGCGAA+GGG | + | tig0021200:63913-63932 | Msa1388960:intron | 55.0% | |
| CTTCGCGAGGCCATGTCACA+TGG | - | tig0021200:63914-63933 | None:intergenic | 60.0% | |
| CATGTGACATGGCCTCGCGA+AGG | + | tig0021200:63912-63931 | Msa1388960:intron | 60.0% | |
| GATCCTCTGATCCCTTCGCG+AGG | - | tig0021200:63927-63946 | None:intergenic | 60.0% | |
| GCGCTAAGCTTCCAACCACC+CGG | + | tig0021200:64494-64513 | Msa1388960:intron | 60.0% | |
| TAACAGGGGCCCTGGGCTGT+AGG | + | tig0021200:63653-63672 | Msa1388960:intron | 65.0% | |
| TGGCCTCGCGAAGGGATCAG+AGG | + | tig0021200:63921-63940 | Msa1388960:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0021200 | gene | 59979 | 65799 | 59979 | ID=Msa1388960;Name=Msa1388960 |
| tig0021200 | mRNA | 59979 | 65799 | 59979 | ID=Msa1388960-mRNA-1;Parent=Msa1388960;Name=Msa1388960-mRNA-1;_AED=0.01;_eAED=0.01;_QI=0|0|0|1|0.5|1|3|0|139 |
| tig0021200 | exon | 59979 | 60116 | 59979 | ID=Msa1388960-mRNA-1:exon:11371;Parent=Msa1388960-mRNA-1 |
| tig0021200 | exon | 64963 | 65100 | 64963 | ID=Msa1388960-mRNA-1:exon:11372;Parent=Msa1388960-mRNA-1 |
| tig0021200 | exon | 65656 | 65799 | 65656 | ID=Msa1388960-mRNA-1:exon:11373;Parent=Msa1388960-mRNA-1 |
| tig0021200 | CDS | 59979 | 60116 | 59979 | ID=Msa1388960-mRNA-1:cds;Parent=Msa1388960-mRNA-1 |
| tig0021200 | CDS | 64963 | 65100 | 64963 | ID=Msa1388960-mRNA-1:cds;Parent=Msa1388960-mRNA-1 |
| tig0021200 | CDS | 65656 | 65799 | 65656 | ID=Msa1388960-mRNA-1:cds;Parent=Msa1388960-mRNA-1 |
| Gene Sequence |
| Protein sequence |
