Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0965370 | XP_003620614.2 | 93.617 | 94 | 6 | 0 | 46 | 139 | 34 | 127 | 5.08e-60 | 191 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0965370 | sp|O02414|DYL1_HELCR | 44.444 | 90 | 48 | 1 | 47 | 136 | 1 | 88 | 7.15e-21 | 83.6 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0015140 | Msa0965370 | 0.808849 | 2.529915e-50 | -8.615850e-47 |
| Msa0035130 | Msa0965370 | 0.816017 | 6.867754e-52 | -8.615850e-47 |
| Msa0042550 | Msa0965370 | 0.842125 | 3.130031e-58 | -8.615850e-47 |
| Msa0043500 | Msa0965370 | 0.819832 | 9.441553e-53 | -8.615850e-47 |
| Msa0043650 | Msa0965370 | 0.809041 | 2.302204e-50 | -8.615850e-47 |
| Msa0054820 | Msa0965370 | 0.806519 | 7.909212e-50 | -8.615850e-47 |
| Msa0055070 | Msa0965370 | 0.810805 | 9.603132e-51 | -8.615850e-47 |
| Msa0056450 | Msa0965370 | 0.812704 | 3.707676e-51 | -8.615850e-47 |
| Msa0080830 | Msa0965370 | 0.800275 | 1.555751e-48 | -8.615850e-47 |
| Msa0087800 | Msa0965370 | 0.807653 | 4.551418e-50 | -8.615850e-47 |
| Msa0096580 | Msa0965370 | 0.804483 | 2.114109e-49 | -8.615850e-47 |
| Msa0100160 | Msa0965370 | 0.819052 | 1.422262e-52 | -8.615850e-47 |
| Msa0101020 | Msa0965370 | 0.807525 | 4.843320e-50 | -8.615850e-47 |
| Msa0103250 | Msa0965370 | 0.809316 | 2.009354e-50 | -8.615850e-47 |
| Msa0106620 | Msa0965370 | 0.822813 | 1.937899e-53 | -8.615850e-47 |
| Msa0106710 | Msa0965370 | 0.815949 | 7.113006e-52 | -8.615850e-47 |
| Msa0641730 | Msa0965370 | 0.807441 | 5.047641e-50 | -8.615850e-47 |
| Msa0652690 | Msa0965370 | 0.813372 | 2.646289e-51 | -8.615850e-47 |
| Msa0661320 | Msa0965370 | 0.803483 | 3.411908e-49 | -8.615850e-47 |
| Msa0679550 | Msa0965370 | 0.805028 | 1.626993e-49 | -8.615850e-47 |
| Msa0705190 | Msa0965370 | 0.801924 | 7.157918e-49 | -8.615850e-47 |
| Msa0705990 | Msa0965370 | 0.814213 | 1.727727e-51 | -8.615850e-47 |
| Msa0710270 | Msa0965370 | 0.805928 | 1.053141e-49 | -8.615850e-47 |
| Msa0712560 | Msa0965370 | 0.811807 | 5.818845e-51 | -8.615850e-47 |
| Msa0732600 | Msa0965370 | 0.808646 | 2.796556e-50 | -8.615850e-47 |
| Msa0741070 | Msa0965370 | 0.808782 | 2.614673e-50 | -8.615850e-47 |
| Msa0749440 | Msa0965370 | 0.812854 | 3.437788e-51 | -8.615850e-47 |
| Msa0750250 | Msa0965370 | 0.818386 | 2.014070e-52 | -8.615850e-47 |
| Msa0751850 | Msa0965370 | 0.813036 | 3.136052e-51 | -8.615850e-47 |
| Msa0797250 | Msa0965370 | 0.813327 | 2.707918e-51 | -8.615850e-47 |
| Msa0807070 | Msa0965370 | -0.801169 | 1.022284e-48 | -8.615850e-47 |
| Msa0831850 | Msa0965370 | 0.806998 | 6.264591e-50 | -8.615850e-47 |
| Msa0145110 | Msa0965370 | 0.802831 | 4.654495e-49 | -8.615850e-47 |
| Msa0154920 | Msa0965370 | 0.802588 | 5.225744e-49 | -8.615850e-47 |
| Msa0178510 | Msa0965370 | 0.844829 | 5.933728e-59 | -8.615850e-47 |
| Msa0187030 | Msa0965370 | 0.808425 | 3.117062e-50 | -8.615850e-47 |
| Msa0192640 | Msa0965370 | 0.814507 | 1.487690e-51 | -8.615850e-47 |
| Msa0193540 | Msa0965370 | 0.804377 | 2.224169e-49 | -8.615850e-47 |
| Msa0205010 | Msa0965370 | 0.825079 | 5.699416e-54 | -8.615850e-47 |
| Msa0207350 | Msa0965370 | 0.800708 | 1.269517e-48 | -8.615850e-47 |
| Msa0218350 | Msa0965370 | 0.809913 | 1.495517e-50 | -8.615850e-47 |
| Msa0223120 | Msa0965370 | 0.811384 | 7.191932e-51 | -8.615850e-47 |
| Msa0378970 | Msa0965370 | 0.802636 | 5.107508e-49 | -8.615850e-47 |
| Msa0387050 | Msa0965370 | 0.812108 | 5.003525e-51 | -8.615850e-47 |
| Msa0389910 | Msa0965370 | 0.825367 | 4.872870e-54 | -8.615850e-47 |
| Msa0394260 | Msa0965370 | 0.813173 | 2.927240e-51 | -8.615850e-47 |
| Msa0394690 | Msa0965370 | 0.805484 | 1.305481e-49 | -8.615850e-47 |
| Msa0410300 | Msa0965370 | 0.810078 | 1.378499e-50 | -8.615850e-47 |
| Msa0422180 | Msa0965370 | 0.823133 | 1.632150e-53 | -8.615850e-47 |
| Msa0432160 | Msa0965370 | 0.804413 | 2.185931e-49 | -8.615850e-47 |
| Msa0461590 | Msa0965370 | 0.810912 | 9.104928e-51 | -8.615850e-47 |
| Msa0468320 | Msa0965370 | 0.811316 | 7.440613e-51 | -8.615850e-47 |
| Msa0473330 | Msa0965370 | 0.802298 | 5.994967e-49 | -8.615850e-47 |
| Msa0476680 | Msa0965370 | 0.805775 | 1.134506e-49 | -8.615850e-47 |
| Msa0480780 | Msa0965370 | 0.814684 | 1.359160e-51 | -8.615850e-47 |
| Msa0241140 | Msa0965370 | 0.802950 | 4.398065e-49 | -8.615850e-47 |
| Msa0241190 | Msa0965370 | 0.803082 | 4.129841e-49 | -8.615850e-47 |
| Msa0307310 | Msa0965370 | 0.809362 | 1.964681e-50 | -8.615850e-47 |
| Msa0312910 | Msa0965370 | 0.811424 | 7.048766e-51 | -8.615850e-47 |
| Msa0322680 | Msa0965370 | 0.806578 | 7.686091e-50 | -8.615850e-47 |
| Msa0328070 | Msa0965370 | 0.815359 | 9.624871e-52 | -8.615850e-47 |
| Msa0339740 | Msa0965370 | 0.800298 | 1.538959e-48 | -8.615850e-47 |
| Msa0342010 | Msa0965370 | 0.804886 | 1.741915e-49 | -8.615850e-47 |
| Msa0347950 | Msa0965370 | 0.804333 | 2.271802e-49 | -8.615850e-47 |
| Msa0347990 | Msa0965370 | 0.800821 | 1.204183e-48 | -8.615850e-47 |
| Msa0349700 | Msa0965370 | 0.804043 | 2.610030e-49 | -8.615850e-47 |
| Msa0514610 | Msa0965370 | 0.805898 | 1.068881e-49 | -8.615850e-47 |
| Msa0517640 | Msa0965370 | 0.805896 | 1.069741e-49 | -8.615850e-47 |
| Msa0518440 | Msa0965370 | 0.821697 | 3.518667e-53 | -8.615850e-47 |
| Msa0521010 | Msa0965370 | 0.802582 | 5.239047e-49 | -8.615850e-47 |
| Msa0521670 | Msa0965370 | 0.832418 | 9.559841e-56 | -8.615850e-47 |
| Msa0532930 | Msa0965370 | 0.801600 | 8.342286e-49 | -8.615850e-47 |
| Msa0532980 | Msa0965370 | 0.808951 | 2.406255e-50 | -8.615850e-47 |
| Msa0579660 | Msa0965370 | 0.804684 | 1.919502e-49 | -8.615850e-47 |
| Msa0844110 | Msa0965370 | 0.816807 | 4.571568e-52 | -8.615850e-47 |
| Msa0853950 | Msa0965370 | 0.811538 | 6.658139e-51 | -8.615850e-47 |
| Msa0866400 | Msa0965370 | 0.811809 | 5.812757e-51 | -8.615850e-47 |
| Msa0868160 | Msa0965370 | 0.807199 | 5.680534e-50 | -8.615850e-47 |
| Msa0873860 | Msa0965370 | 0.817591 | 3.045559e-52 | -8.615850e-47 |
| Msa0892570 | Msa0965370 | 0.808728 | 2.685099e-50 | -8.615850e-47 |
| Msa0899990 | Msa0965370 | 0.962780 | 2.752857e-121 | -8.615850e-47 |
| Msa0902830 | Msa0965370 | 0.807361 | 5.248879e-50 | -8.615850e-47 |
| Msa0936390 | Msa0965370 | 0.821643 | 3.620404e-53 | -8.615850e-47 |
| Msa0945240 | Msa0965370 | 0.813964 | 1.960443e-51 | -8.615850e-47 |
| Msa0962840 | Msa0965370 | 0.807216 | 5.634098e-50 | -8.615850e-47 |
| Msa0965370 | Msa0975940 | 0.804645 | 1.955884e-49 | -8.615850e-47 |
| Msa0965370 | Msa0992600 | 0.803812 | 2.915242e-49 | -8.615850e-47 |
| Msa0965370 | Msa0999860 | 0.941596 | 3.157563e-101 | -8.615850e-47 |
| Msa0965370 | Msa1001990 | 0.943134 | 2.079440e-102 | -8.615850e-47 |
| Msa0965370 | Msa1008750 | 0.814385 | 1.582406e-51 | -8.615850e-47 |
| Msa0965370 | Msa1031820 | 0.804306 | 2.301220e-49 | -8.615850e-47 |
| Msa0965370 | Msa1034280 | 0.800410 | 1.460354e-48 | -8.615850e-47 |
| Msa0965370 | Msa1034500 | 0.817457 | 3.264593e-52 | -8.615850e-47 |
| Msa0965370 | Msa1038080 | 0.804731 | 1.876986e-49 | -8.615850e-47 |
| Msa0965370 | Msa1050740 | 0.809107 | 2.228363e-50 | -8.615850e-47 |
| Msa0965370 | Msa1063420 | 0.823698 | 1.203742e-53 | -8.615850e-47 |
| Msa0965370 | Msa1064250 | 0.811833 | 5.745139e-51 | -8.615850e-47 |
| Msa0965370 | Msa1076960 | 0.801718 | 7.889461e-49 | -8.615850e-47 |
| Msa0965370 | Msa1096060 | 0.808537 | 2.949507e-50 | -8.615850e-47 |
| Msa0965370 | Msa1098250 | 0.800858 | 1.183357e-48 | -8.615850e-47 |
| Msa0965370 | Msa1098270 | 0.805045 | 1.613156e-49 | -8.615850e-47 |
| Msa0965370 | Msa1118760 | 0.813297 | 2.748549e-51 | -8.615850e-47 |
| Msa0965370 | Msa1130530 | 0.820057 | 8.387037e-53 | -8.615850e-47 |
| Msa0965370 | Msa1143020 | 0.823781 | 1.151554e-53 | -8.615850e-47 |
| Msa0965370 | Msa1158660 | 0.806488 | 8.028378e-50 | -8.615850e-47 |
| Msa0965370 | Msa1163540 | 0.827737 | 1.326308e-54 | -8.615850e-47 |
| Msa0965370 | Msa1270660 | 0.803029 | 4.237090e-49 | -8.615850e-47 |
| Msa0965370 | Msa1286550 | 0.812414 | 4.291526e-51 | -8.615850e-47 |
| Msa0965370 | Msa1341490 | 0.806195 | 9.255699e-50 | -8.615850e-47 |
| Msa0965370 | Msa1357080 | 0.806995 | 6.273675e-50 | -8.615850e-47 |
| Msa0965370 | Msa1359560 | 0.818781 | 1.638444e-52 | -8.615850e-47 |
| Msa0965370 | Msa1359920 | 0.803226 | 3.856846e-49 | -8.615850e-47 |
| Msa0965370 | Msa1368430 | 0.808006 | 3.828681e-50 | -8.615850e-47 |
| Msa0965370 | Msa1371940 | 0.812503 | 4.102177e-51 | -8.615850e-47 |
| Msa0965370 | Msa1372150 | 0.830822 | 2.364617e-55 | -8.615850e-47 |
| Msa0965370 | Msa1381480 | 0.819940 | 8.917712e-53 | -8.615850e-47 |
| Msa0965370 | Msa1382790 | 0.807183 | 5.725208e-50 | -8.615850e-47 |
| Msa0965370 | Msa1383230 | 0.803372 | 3.598092e-49 | -8.615850e-47 |
| Msa0965370 | Msa1388960 | 0.937074 | 6.251649e-98 | -8.615850e-47 |
| Msa0965370 | Msa1407190 | 0.831713 | 1.428036e-55 | -8.615850e-47 |
| Msa0965370 | Msa1416370 | 0.817555 | 3.103736e-52 | -8.615850e-47 |
| Msa0965370 | Msa1424350 | 0.800760 | 1.238940e-48 | -8.615850e-47 |
| Msa0965370 | Msa1426570 | 0.818931 | 1.514858e-52 | -8.615850e-47 |
| Msa0965370 | Msa1432130 | 0.826379 | 2.802354e-54 | -8.615850e-47 |
| Msa0965370 | Msa1437270 | 0.806728 | 7.145820e-50 | -8.615850e-47 |
| Msa0965370 | Msa1446780 | 0.802818 | 4.684215e-49 | -8.615850e-47 |
| Msa0965370 | Msa1447180 | 0.817801 | 2.730627e-52 | -8.615850e-47 |
| Msa0965370 | Msa1457160 | 0.811111 | 8.244781e-51 | -8.615850e-47 |
| Msa0965370 | Msa1462360 | 0.809367 | 1.959492e-50 | -8.615850e-47 |
| Msa0965370 | Msa1465570 | 0.801866 | 7.356656e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0965370 | MtrunA17_Chr6g0485891 | 93.617 | 94 | 6 | 0 | 46 | 139 | 34 | 127 | 4.67e-64 | 191 |
| Msa0965370 | MtrunA17_Chr2g0331651 | 74.444 | 90 | 23 | 0 | 47 | 136 | 1 | 90 | 9.27e-50 | 154 |
| Msa0965370 | MtrunA17_Chr8g0360861 | 51.087 | 92 | 45 | 0 | 47 | 138 | 1 | 92 | 4.46e-30 | 104 |
| Msa0965370 | MtrunA17_Chr4g0063491 | 45.570 | 79 | 43 | 0 | 57 | 135 | 159 | 237 | 1.15e-19 | 81.6 |
| Msa0965370 | MtrunA17_Chr4g0059791 | 44.444 | 81 | 44 | 1 | 58 | 137 | 222 | 302 | 1.06e-16 | 74.7 |
| Msa0965370 | MtrunA17_Chr8g0391451 | 36.905 | 84 | 51 | 1 | 54 | 135 | 56 | 139 | 2.69e-16 | 70.9 |
| Msa0965370 | MtrunA17_Chr4g0067531 | 36.471 | 85 | 52 | 1 | 51 | 135 | 46 | 128 | 3.01e-16 | 70.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0965370 | AT1G52245.1 | 76.344 | 93 | 22 | 0 | 47 | 139 | 1 | 93 | 9.47e-52 | 159 |
| Msa0965370 | AT3G16120.2 | 72.826 | 92 | 25 | 0 | 47 | 138 | 1 | 92 | 3.47e-47 | 148 |
| Msa0965370 | AT3G16120.1 | 72.826 | 92 | 25 | 0 | 47 | 138 | 1 | 92 | 3.47e-47 | 148 |
| Msa0965370 | AT4G27360.1 | 53.846 | 91 | 42 | 0 | 47 | 137 | 1 | 91 | 1.26e-31 | 108 |
| Msa0965370 | AT5G20110.1 | 46.154 | 78 | 42 | 0 | 58 | 135 | 123 | 200 | 3.12e-18 | 77.4 |
| Msa0965370 | AT4G15930.1 | 38.824 | 85 | 50 | 1 | 51 | 135 | 39 | 121 | 1.93e-17 | 73.6 |
| Msa0965370 | AT1G23220.1 | 36.471 | 85 | 53 | 1 | 54 | 137 | 38 | 122 | 2.68e-17 | 73.2 |
Find 23 sgRNAs with CRISPR-Local
Find 295 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCTTATAGATTAGAAAATTA+AGG | 0.208962 | 6_3:+92714571 | None:intergenic |
| CAGGAGTTTGATAAGAATTA+TGG | 0.245035 | 6_3:-92714681 | Msa0965370:CDS |
| TGTGTAGTAGGTTCCAATTT+TGG | 0.285821 | 6_3:-92714645 | Msa0965370:CDS |
| CTTATAGATTAGAAAATTAA+GGG | 0.370499 | 6_3:+92714572 | None:intergenic |
| TGTGATTGTAGATCAATTGC+TGG | 0.417111 | 6_3:-92715269 | Msa0965370:CDS |
| TGTGATTGTAGATCAATTGC+TGG | 0.453871 | 6_3:-92720254 | Msa0965370:CDS |
| TTGATAAGAATTATGGAAGT+GGG | 0.454204 | 6_3:-92714674 | Msa0965370:CDS |
| ATATAAAGGTCCCTGGTGTA+TGG | 0.455885 | 6_3:+92714610 | None:intergenic |
| CTAAAGATGTTGGAAGGAAA+AGG | 0.470654 | 6_3:-92720362 | None:intergenic |
| CTCAAGATGTTGGAAGGAAA+AGG | 0.486434 | 6_3:-92715377 | Msa0965370:intron |
| TTTGATAAGAATTATGGAAG+TGG | 0.490477 | 6_3:-92714675 | Msa0965370:CDS |
| AGTGGGTGGCAATGTGTAGT+AGG | 0.509524 | 6_3:-92714657 | Msa0965370:CDS |
| GCTTGAATTTGCATCTTCAA+AGG | 0.513495 | 6_3:+92715332 | None:intergenic |
| GCTTGAATTTGCATCTTCAA+AGG | 0.513495 | 6_3:+92720317 | None:intergenic |
| GAGCAACTCAAGATGTTGGA+AGG | 0.579416 | 6_3:-92715383 | Msa0965370:intron |
| AAGCAACTAAAGATGTTGGA+AGG | 0.603964 | 6_3:-92720368 | None:intergenic |
| AATTGCTGGTAATATCAAGA+AGG | 0.615321 | 6_3:-92720240 | Msa0965370:intron |
| ATAAGAATTATGGAAGTGGG+TGG | 0.626217 | 6_3:-92714671 | Msa0965370:CDS |
| AGCTTGAGAAGCAAATGACA+TGG | 0.664039 | 6_3:+92715310 | None:intergenic |
| AGCTTGAGAAGCAAATGACA+TGG | 0.664039 | 6_3:+92720295 | None:intergenic |
| GCTCAAGGAGAACAATCAAG+AGG | 0.668274 | 6_3:+92714542 | None:intergenic |
| GATGTTGGAAGGAAAAGGTG+TGG | 0.730714 | 6_3:-92720357 | Msa0965370:CDS |
| GATGTTGGAAGGAAAAGGTG+TGG | 0.758385 | 6_3:-92715372 | Msa0965370:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTATTATTTTTTATTTAAT+AGG | - | chr6_3:92720055-92720074 | Msa0965370:intron | 0.0% |
| !! | AATAATTAGCATAAATTAAA+AGG | + | chr6_3:92715089-92715108 | None:intergenic | 10.0% |
| !!! | GTCAATAAAAATAAAAATTT+TGG | - | chr6_3:92715181-92715200 | Msa0965370:intron | 10.0% |
| !!! | CAATAAAAATAAAAATTTTG+GGG | - | chr6_3:92715183-92715202 | Msa0965370:intron | 10.0% |
| !! | TTTATATTAGCATATAAAAT+TGG | + | chr6_3:92718120-92718139 | None:intergenic | 10.0% |
| !! | TATGTGAAAAAAAATAAAAA+TGG | + | chr6_3:92718459-92718478 | None:intergenic | 10.0% |
| !! | GTTTATAAATACAAATAAAA+TGG | + | chr6_3:92718561-92718580 | None:intergenic | 10.0% |
| !! | TTCCAATTAATAATTAAATA+AGG | - | chr6_3:92720193-92720212 | Msa0965370:intron | 10.0% |
| !!! | AACCTTATTTAATTATTAAT+TGG | + | chr6_3:92720198-92720217 | None:intergenic | 10.0% |
| !! | TGAAAATATTAGAATGAATT+TGG | + | chr6_3:92714778-92714797 | None:intergenic | 15.0% |
| !! | CTAAACAAATTATTTGTATT+TGG | + | chr6_3:92714929-92714948 | None:intergenic | 15.0% |
| !!! | CAAATACAAATAATTTGTTT+AGG | - | chr6_3:92714927-92714946 | Msa0965370:intron | 15.0% |
| !! | TAATTATTTGCAAATGAATT+TGG | - | chr6_3:92715101-92715120 | Msa0965370:intron | 15.0% |
| !! | GTAGCTAAAAAAATATTATT+GGG | - | chr6_3:92715129-92715148 | Msa0965370:intron | 15.0% |
| !! | TAGCTAAAAAAATATTATTG+GGG | - | chr6_3:92715130-92715149 | Msa0965370:intron | 15.0% |
| !!! | TTTATTTTTATTGACTCATT+AGG | + | chr6_3:92715176-92715195 | None:intergenic | 15.0% |
| !! | ATTAAACTATATCATATCTA+AGG | - | chr6_3:92716764-92716783 | Msa0965370:intron | 15.0% |
| !! | GTGAAAAATTGTAATATATT+TGG | - | chr6_3:92716851-92716870 | Msa0965370:intron | 15.0% |
| !!! | AAACTAAAAACTTTTTTTAG+AGG | - | chr6_3:92718072-92718091 | Msa0965370:intron | 15.0% |
| !! | TGAAAAAAAATAAAAATGGT+TGG | + | chr6_3:92718455-92718474 | None:intergenic | 15.0% |
| !! | TTATTCAAGAATAACAAAAT+TGG | - | chr6_3:92718769-92718788 | Msa0965370:intron | 15.0% |
| !! | TATATCCTTATCAAAAAATT+CGG | - | chr6_3:92719334-92719353 | Msa0965370:intron | 15.0% |
| !! | AATATTTAAATTGAACTTTG+CGG | + | chr6_3:92719945-92719964 | None:intergenic | 15.0% |
| !! | AATTTAAATATTCCAAAACA+TGG | - | chr6_3:92719953-92719972 | Msa0965370:intron | 15.0% |
| !! | ATTTAAATATTCCAAAACAT+GGG | - | chr6_3:92719954-92719973 | Msa0965370:intron | 15.0% |
| !!! | TTTTTTATTTAATAGGATGA+AGG | - | chr6_3:92720062-92720081 | Msa0965370:intron | 15.0% |
| !!! | TTTTTATTTAATAGGATGAA+GGG | - | chr6_3:92720063-92720082 | Msa0965370:intron | 15.0% |
| !! | CTTATAGATTAGAAAATTAA+GGG | + | chr6_3:92720344-92720363 | None:intergenic | 15.0% |
| !!! | CTTAATTTTCTAATCTATAA+GGG | - | chr6_3:92720343-92720362 | Msa0965370:CDS | 15.0% |
| !!! | GAAAATCACTCAATTTTTTT+GGG | + | chr6_3:92714739-92714758 | None:intergenic | 20.0% |
| !! | AATGTACAATTAGTATAAAC+AGG | + | chr6_3:92714862-92714881 | None:intergenic | 20.0% |
| !! | GGTAGCTAAAAAAATATTAT+TGG | - | chr6_3:92715128-92715147 | Msa0965370:intron | 20.0% |
| !!! | TTTAACTAATAATTTTGTCC+TGG | - | chr6_3:92715454-92715473 | Msa0965370:intron | 20.0% |
| !! | ATTTGAATAGAATGGATAAA+TGG | - | chr6_3:92715516-92715535 | Msa0965370:intron | 20.0% |
| !!! | TTCATGTTTTACTTGAATTT+GGG | + | chr6_3:92715706-92715725 | None:intergenic | 20.0% |
| !!! | TTTCATGTTTTACTTGAATT+TGG | + | chr6_3:92715707-92715726 | None:intergenic | 20.0% |
| !! | AGTAGATAATGAAAAGTAAA+TGG | - | chr6_3:92715742-92715761 | Msa0965370:intron | 20.0% |
| !! | TATTATTCGTTATAATCTAG+TGG | + | chr6_3:92716199-92716218 | None:intergenic | 20.0% |
| !! | TGAATAAAAATCTTTGTCAT+TGG | + | chr6_3:92716521-92716540 | None:intergenic | 20.0% |
| !!! | TGATTGAAGTTTGTATATTT+TGG | + | chr6_3:92716956-92716975 | None:intergenic | 20.0% |
| !!! | TTTTTAACTGAAACATGAAT+TGG | + | chr6_3:92717123-92717142 | None:intergenic | 20.0% |
| !! | AAGCTGAAAATAAACTATAA+AGG | - | chr6_3:92717208-92717227 | Msa0965370:intron | 20.0% |
| !!! | CCACAAATTATATTTTTTAG+AGG | + | chr6_3:92717881-92717900 | None:intergenic | 20.0% |
| !!! | CCTCTAAAAAATATAATTTG+TGG | - | chr6_3:92717878-92717897 | Msa0965370:intron | 20.0% |
| !! | TGCTTATGAAAAATAATTGA+AGG | - | chr6_3:92717991-92718010 | Msa0965370:intron | 20.0% |
| !! | TAATATAAATTAACCCATCT+GGG | - | chr6_3:92718131-92718150 | Msa0965370:intron | 20.0% |
| !!! | TAGTAATTGACTTAAGATTT+TGG | - | chr6_3:92718160-92718179 | Msa0965370:intron | 20.0% |
| !!! | GATTCATGACTATATTTTAA+TGG | - | chr6_3:92718533-92718552 | Msa0965370:intron | 20.0% |
| !!! | TTTGAAAAGGTATGTAATAA+GGG | + | chr6_3:92718663-92718682 | None:intergenic | 20.0% |
| !!! | TTTTGAAAAGGTATGTAATA+AGG | + | chr6_3:92718664-92718683 | None:intergenic | 20.0% |
| !!! | ATCACACTAAAATTTTGAAA+AGG | + | chr6_3:92718676-92718695 | None:intergenic | 20.0% |
| !! | TGTTATTCTTGAATAAACTT+TGG | + | chr6_3:92718765-92718784 | None:intergenic | 20.0% |
| !!! | ATTTTTTTTTCTCTTCAAAG+TGG | + | chr6_3:92719234-92719253 | None:intergenic | 20.0% |
| !! | ATATCCTTATCAAAAAATTC+GGG | - | chr6_3:92719335-92719354 | Msa0965370:intron | 20.0% |
| !! | TTGAATTGAATGAATGATTA+AGG | + | chr6_3:92719392-92719411 | None:intergenic | 20.0% |
| !! | ATCATTCATTCAATTCAAAA+TGG | - | chr6_3:92719394-92719413 | Msa0965370:intron | 20.0% |
| !! | GGAAAATAACTCAAATTTAA+GGG | + | chr6_3:92719720-92719739 | None:intergenic | 20.0% |
| !! | TGGAAAATAACTCAAATTTA+AGG | + | chr6_3:92719721-92719740 | None:intergenic | 20.0% |
| !! | GAAAATATTAGAGATGAATT+TGG | + | chr6_3:92719758-92719777 | None:intergenic | 20.0% |
| !!! | TATTTTATGAGTTTGAAGTT+TGG | - | chr6_3:92720164-92720183 | Msa0965370:intron | 20.0% |
| !! | TAATTAAATAAGGTTGTGTT+TGG | - | chr6_3:92720203-92720222 | Msa0965370:intron | 20.0% |
| !! | CTCAAGAGAAAAATATATAA+AGG | + | chr6_3:92720320-92720339 | None:intergenic | 20.0% |
| !! | CCTTATAGATTAGAAAATTA+AGG | + | chr6_3:92720345-92720364 | None:intergenic | 20.0% |
| !!! | CCTTAATTTTCTAATCTATA+AGG | - | chr6_3:92720342-92720361 | Msa0965370:CDS | 20.0% |
| !!! | GGAAAATCACTCAATTTTTT+TGG | + | chr6_3:92714740-92714759 | None:intergenic | 25.0% |
| ! | TGAATTTGGATTTATGAGAT+TGG | + | chr6_3:92714764-92714783 | None:intergenic | 25.0% |
| ! | ACTAATTGTACATTTCTTTG+TGG | - | chr6_3:92714868-92714887 | Msa0965370:intron | 25.0% |
| ! | AAATTGTGTTGTGAGTAAAT+AGG | + | chr6_3:92715313-92715332 | None:intergenic | 25.0% |
| ! | TTTCTATTCAATAAAGCAAG+AGG | - | chr6_3:92715429-92715448 | Msa0965370:intron | 25.0% |
| ! | ATTCTATTCAAATGAACAAG+AGG | + | chr6_3:92715509-92715528 | None:intergenic | 25.0% |
| ! | TCTTGTTCATTTGAATAGAA+TGG | - | chr6_3:92715508-92715527 | Msa0965370:intron | 25.0% |
| ! | TCTTGTTCATTTGAATAGAA+CGG | - | chr6_3:92715508-92715527 | Msa0965370:intron | 25.0% |
| ! | AAAGTAAAAGGTGATTTACT+AGG | + | chr6_3:92715619-92715638 | None:intergenic | 25.0% |
| !! | AGTAAATCACCTTTTACTTT+AGG | - | chr6_3:92715619-92715638 | Msa0965370:intron | 25.0% |
| !! | TCATGTTTTACTTGAATTTG+GGG | + | chr6_3:92715705-92715724 | None:intergenic | 25.0% |
| ! | TAAATGGCTCAGAAAATAAT+GGG | - | chr6_3:92715758-92715777 | Msa0965370:intron | 25.0% |
| ! | AAAATCATCATACAAGAAGT+TGG | - | chr6_3:92715924-92715943 | Msa0965370:intron | 25.0% |
| !!! | ATGATGTTATTTTCCTTCTT+TGG | + | chr6_3:92715959-92715978 | None:intergenic | 25.0% |
| ! | CAATGTATCATCATATTCAT+TGG | - | chr6_3:92716027-92716046 | Msa0965370:intron | 25.0% |
| ! | CATATTCATTGGATAATTAC+AGG | - | chr6_3:92716038-92716057 | Msa0965370:intron | 25.0% |
| !! | TGGTTTGTATAATGTATCAA+TGG | + | chr6_3:92716172-92716191 | None:intergenic | 25.0% |
| ! | AGCCTTAAATTTATCATCAT+CGG | - | chr6_3:92716334-92716353 | Msa0965370:intron | 25.0% |
| !! | ATGTGTTTTGTGTCAAATTT+TGG | + | chr6_3:92716746-92716765 | None:intergenic | 25.0% |
| ! | ACTATAAAGGTAAAATCAAG+AGG | - | chr6_3:92717221-92717240 | Msa0965370:intron | 25.0% |
| ! | TATTCTTCAATTACCATCTT+AGG | + | chr6_3:92717257-92717276 | None:intergenic | 25.0% |
| ! | AAGATGGTAATTGAAGAATA+TGG | - | chr6_3:92717257-92717276 | Msa0965370:intron | 25.0% |
| !! | TAGAATTATTGGTGTTTGAT+AGG | + | chr6_3:92717344-92717363 | None:intergenic | 25.0% |
| ! | ACCAATAATTCTACGAAATT+AGG | - | chr6_3:92717351-92717370 | Msa0965370:intron | 25.0% |
| ! | TCCTAATTTCGTAGAATTAT+TGG | + | chr6_3:92717355-92717374 | None:intergenic | 25.0% |
| ! | GATTTATAGAGTTGAGTTTA+GGG | - | chr6_3:92717421-92717440 | Msa0965370:intron | 25.0% |
| ! | GAACAAAATTTAACTGTCAT+TGG | - | chr6_3:92717712-92717731 | Msa0965370:intron | 25.0% |
| ! | CTAATATAAATTAACCCATC+TGG | - | chr6_3:92718130-92718149 | Msa0965370:intron | 25.0% |
| ! | AAAACTATAGACTATGTGTA+CGG | + | chr6_3:92718327-92718346 | None:intergenic | 25.0% |
| ! | CTAAGAATAATCATTTGAGT+TGG | + | chr6_3:92718599-92718618 | None:intergenic | 25.0% |
| ! | TTCTTGAATAAACTTTGGAT+CGG | + | chr6_3:92718760-92718779 | None:intergenic | 25.0% |
| !! | TTGATCATGTTTTACTAAGA+GGG | + | chr6_3:92718966-92718985 | None:intergenic | 25.0% |
| !! | TTTGATCATGTTTTACTAAG+AGG | + | chr6_3:92718967-92718986 | None:intergenic | 25.0% |
| ! | GAAAAGGTAACATCAATATT+TGG | - | chr6_3:92719048-92719067 | Msa0965370:intron | 25.0% |
| ! | GAATGAATGATTAAGGAATT+TGG | + | chr6_3:92719385-92719404 | None:intergenic | 25.0% |
| ! | CAATAACAATAGAGAGAATT+TGG | - | chr6_3:92719477-92719496 | Msa0965370:intron | 25.0% |
| ! | TGAATTTGGATTTATGAGAT+TGG | + | chr6_3:92714764-92714783 | None:intergenic | 25.0% |
| !! | TTGAATTTATACCCATGTTT+TGG | + | chr6_3:92719968-92719987 | None:intergenic | 25.0% |
| !!! | CTATTTTTAGTATGACGAAT+CGG | - | chr6_3:92720007-92720026 | Msa0965370:intron | 25.0% |
| ! | ATTATCCTAACATTTGACTA+TGG | - | chr6_3:92720126-92720145 | Msa0965370:intron | 25.0% |
| ! | AAAAACCATAGTCAAATGTT+AGG | + | chr6_3:92720134-92720153 | None:intergenic | 25.0% |
| ! | TTTGATAAGAATTATGGAAG+TGG | - | chr6_3:92720238-92720257 | Msa0965370:intron | 25.0% |
| ! | TTGATAAGAATTATGGAAGT+GGG | - | chr6_3:92720239-92720258 | Msa0965370:intron | 25.0% |
| AATTGCTGGTAATATCAAGA+AGG | - | chr6_3:92714673-92714692 | Msa0965370:CDS | 30.0% | |
| ATTTGGATTTATGAGATTGG+TGG | + | chr6_3:92714761-92714780 | None:intergenic | 30.0% | |
| ! | AAGCTAGAGAAATTTTTACG+AGG | - | chr6_3:92714900-92714919 | Msa0965370:intron | 30.0% |
| ! | AGCTAGAGAAATTTTTACGA+GGG | - | chr6_3:92714901-92714920 | Msa0965370:intron | 30.0% |
| TTTGCAAATGAATTTGGTTG+AGG | - | chr6_3:92715107-92715126 | Msa0965370:intron | 30.0% | |
| GAATATTACGAAGATTCTTG+AGG | + | chr6_3:92715260-92715279 | None:intergenic | 30.0% | |
| ! | ACAATCCTTTGTTTCTCATA+TGG | - | chr6_3:92715338-92715357 | Msa0965370:CDS | 30.0% |
| ! | CAATCCTTTGTTTCTCATAT+GGG | - | chr6_3:92715339-92715358 | Msa0965370:CDS | 30.0% |
| TTCTTAATCTACCTTCTCAT+TGG | - | chr6_3:92715573-92715592 | Msa0965370:intron | 30.0% | |
| GTAAATGGCTCAGAAAATAA+TGG | - | chr6_3:92715757-92715776 | Msa0965370:intron | 30.0% | |
| TTCACTGAAATTGTGCATAT+CGG | - | chr6_3:92716087-92716106 | Msa0965370:intron | 30.0% | |
| ACATACATAAGACACTAGAT+TGG | - | chr6_3:92716127-92716146 | Msa0965370:intron | 30.0% | |
| GACCGATGATGATAAATTTA+AGG | + | chr6_3:92716339-92716358 | None:intergenic | 30.0% | |
| CTAATCTAATCTTCTCAATG+AGG | + | chr6_3:92716877-92716896 | None:intergenic | 30.0% | |
| ACCAACAATGAAAAATCAAG+AGG | - | chr6_3:92717000-92717019 | Msa0965370:intron | 30.0% | |
| ! | TCCTCTTGATTTTTCATTGT+TGG | + | chr6_3:92717004-92717023 | None:intergenic | 30.0% |
| ! | ACATTGATGATATCTGTGAT+AGG | + | chr6_3:92717100-92717119 | None:intergenic | 30.0% |
| AGGAATTGAAAAACCTAAGA+TGG | - | chr6_3:92717241-92717260 | Msa0965370:intron | 30.0% | |
| CATATCATATTGATGCGAAT+TGG | + | chr6_3:92717302-92717321 | None:intergenic | 30.0% | |
| GGATTTATAGAGTTGAGTTT+AGG | - | chr6_3:92717420-92717439 | Msa0965370:intron | 30.0% | |
| ! | GATTTCAAGAGTATAGTAAC+CGG | - | chr6_3:92717495-92717514 | Msa0965370:intron | 30.0% |
| ! | ATTTCAAGAGTATAGTAACC+GGG | - | chr6_3:92717496-92717515 | Msa0965370:intron | 30.0% |
| !!! | CCACTAACGTTTTTTCTTTT+GGG | + | chr6_3:92717532-92717551 | None:intergenic | 30.0% |
| !!! | ACCACTAACGTTTTTTCTTT+TGG | + | chr6_3:92717533-92717552 | None:intergenic | 30.0% |
| AAGAAAAAACGTTAGTGGTA+AGG | - | chr6_3:92717534-92717553 | Msa0965370:intron | 30.0% | |
| AGAAAAAACGTTAGTGGTAA+GGG | - | chr6_3:92717535-92717554 | Msa0965370:intron | 30.0% | |
| ! | TTTTGCTCTGACTTTTAACA+GGG | - | chr6_3:92718217-92718236 | Msa0965370:intron | 30.0% |
| AGATTCATCAGTGTTTGAAT+CGG | - | chr6_3:92718267-92718286 | Msa0965370:intron | 30.0% | |
| TAATTCTATACCATGTGACA+TGG | - | chr6_3:92718480-92718499 | Msa0965370:intron | 30.0% | |
| !! | GAATAATCATTTGAGTTGGA+GGG | + | chr6_3:92718595-92718614 | None:intergenic | 30.0% |
| !! | AGAATAATCATTTGAGTTGG+AGG | + | chr6_3:92718596-92718615 | None:intergenic | 30.0% |
| ! | ACAAAATTGGTTAGAAGTAC+TGG | - | chr6_3:92718782-92718801 | Msa0965370:intron | 30.0% |
| ATCTATCAACTTGTCTAAAG+TGG | + | chr6_3:92718902-92718921 | None:intergenic | 30.0% | |
| TCATAGACAAAAGAATTGAC+CGG | + | chr6_3:92719095-92719114 | None:intergenic | 30.0% | |
| !!! | GTAACCCGAATTTTTTGATA+AGG | + | chr6_3:92719342-92719361 | None:intergenic | 30.0% |
| !!! | AATTGCTGGTTTTATCAAGA+AGG | - | chr6_3:92719658-92719677 | Msa0965370:intron | 30.0% |
| ATTTGGATTTATGAGATTGG+TGG | + | chr6_3:92714761-92714780 | None:intergenic | 30.0% | |
| TGTTGAAATTTCAACGAGTT+CGG | + | chr6_3:92719801-92719820 | None:intergenic | 30.0% | |
| CGATTCGTCATACTAAAAAT+AGG | + | chr6_3:92720009-92720028 | None:intergenic | 30.0% | |
| TAATAGGATGAAGGGTAATT+AGG | - | chr6_3:92720071-92720090 | Msa0965370:intron | 30.0% | |
| AATAGGATGAAGGGTAATTA+GGG | - | chr6_3:92720072-92720091 | Msa0965370:intron | 30.0% | |
| ! | TATGAGTTTGAAGTTTGGTT+TGG | - | chr6_3:92720169-92720188 | Msa0965370:intron | 30.0% |
| CAGGAGTTTGATAAGAATTA+TGG | - | chr6_3:92720232-92720251 | Msa0965370:intron | 30.0% | |
| GAAAAATATATAAAGGTCCC+TGG | + | chr6_3:92720313-92720332 | None:intergenic | 30.0% | |
| GCTTGAATTTGCATCTTCAA+AGG | + | chr6_3:92714599-92714618 | None:intergenic | 35.0% | |
| TGTGATTGTAGATCAATTGC+TGG | - | chr6_3:92714659-92714678 | Msa0965370:CDS | 35.0% | |
| CCATGGATACAAAAGTTTGT+TGG | + | chr6_3:92714835-92714854 | None:intergenic | 35.0% | |
| ! | CCAACAAACTTTTGTATCCA+TGG | - | chr6_3:92714832-92714851 | Msa0965370:intron | 35.0% |
| TAGTATAAACAGGAGATCCA+TGG | + | chr6_3:92714852-92714871 | None:intergenic | 35.0% | |
| ! | GCTAGAGAAATTTTTACGAG+GGG | - | chr6_3:92714902-92714921 | Msa0965370:intron | 35.0% |
| ! | CTAGAGAAATTTTTACGAGG+GGG | - | chr6_3:92714903-92714922 | Msa0965370:intron | 35.0% |
| GTAACCCATATGAGAAACAA+AGG | + | chr6_3:92715346-92715365 | None:intergenic | 35.0% | |
| ATAACGAATAGAATGACCAG+AGG | + | chr6_3:92715372-92715391 | None:intergenic | 35.0% | |
| ! | TCACCTTTTACTTTAGGCTT+TGG | - | chr6_3:92715625-92715644 | Msa0965370:intron | 35.0% |
| CATCCAAAGCCTAAAGTAAA+AGG | + | chr6_3:92715631-92715650 | None:intergenic | 35.0% | |
| TTGGCATTAACATCCAAAGA+AGG | - | chr6_3:92715943-92715962 | Msa0965370:intron | 35.0% | |
| CGTTATAATCTAGTGGCTTA+TGG | + | chr6_3:92716192-92716211 | None:intergenic | 35.0% | |
| !!! | TATGCTGTTTTATCCTTCCT+TGG | + | chr6_3:92716605-92716624 | None:intergenic | 35.0% |
| TGTCTGTGATGATATCTTGA+AGG | + | chr6_3:92716692-92716711 | None:intergenic | 35.0% | |
| AATCAAGAGGACTCAGAATA+TGG | - | chr6_3:92717013-92717032 | Msa0965370:intron | 35.0% | |
| ATCAAGAGGACTCAGAATAT+GGG | - | chr6_3:92717014-92717033 | Msa0965370:intron | 35.0% | |
| TGGTGATATAACAGAATGGT+CGG | - | chr6_3:92717037-92717056 | Msa0965370:intron | 35.0% | |
| CCCAAAAGAAAAAACGTTAG+TGG | - | chr6_3:92717529-92717548 | Msa0965370:intron | 35.0% | |
| ATAAATTAACCCATCTGGGT+TGG | - | chr6_3:92718135-92718154 | Msa0965370:intron | 35.0% | |
| ! | GTTTTGCTCTGACTTTTAAC+AGG | - | chr6_3:92718216-92718235 | Msa0965370:intron | 35.0% |
| ! | TTTGCTCTGACTTTTAACAG+GGG | - | chr6_3:92718218-92718237 | Msa0965370:intron | 35.0% |
| !! | CATAGTCTATAGTTTTGCCT+TGG | - | chr6_3:92718331-92718350 | Msa0965370:intron | 35.0% |
| !! | CAAATAAGATTAGCTCTAGC+AGG | + | chr6_3:92718395-92718414 | None:intergenic | 35.0% |
| TCTGCTTAACCCACTAAAAA+TGG | - | chr6_3:92718842-92718861 | Msa0965370:intron | 35.0% | |
| !!! | CTCATCGTTCCATTTTTAGT+GGG | + | chr6_3:92718854-92718873 | None:intergenic | 35.0% |
| !! | TCTCATCGTTCCATTTTTAG+TGG | + | chr6_3:92718855-92718874 | None:intergenic | 35.0% |
| ACTTGTACCAGGATAAGAAA+AGG | - | chr6_3:92719032-92719051 | Msa0965370:intron | 35.0% | |
| ! | GATGTTACCTTTTCTTATCC+TGG | + | chr6_3:92719042-92719061 | None:intergenic | 35.0% |
| CATAGACAAAAGAATTGACC+GGG | + | chr6_3:92719094-92719113 | None:intergenic | 35.0% | |
| !!! | TTATTTTGACCAGTGGAGAA+AGG | + | chr6_3:92719202-92719221 | None:intergenic | 35.0% |
| TTAAGGAATTTGGCAGCTTA+TGG | + | chr6_3:92719375-92719394 | None:intergenic | 35.0% | |
| GCTTGAATTTGCATCTTCAA+AGG | + | chr6_3:92714599-92714618 | None:intergenic | 35.0% | |
| TGTGATTGTAGATCAATTGC+TGG | - | chr6_3:92714659-92714678 | Msa0965370:CDS | 35.0% | |
| TAGCAAAGTTGAATTTGAGC+TGG | + | chr6_3:92719907-92719926 | None:intergenic | 35.0% | |
| AGGGTAATTAGGGAAATTCA+TGG | - | chr6_3:92720082-92720101 | Msa0965370:intron | 35.0% | |
| ! | AGGGAAATTCATGGTTTTTG+TGG | - | chr6_3:92720091-92720110 | Msa0965370:intron | 35.0% |
| ! | ATTCATGGTTTTTGTGGTGT+AGG | - | chr6_3:92720097-92720116 | Msa0965370:intron | 35.0% |
| !!! | AGGTTGTGTTTGGTTTTTTC+AGG | - | chr6_3:92720213-92720232 | Msa0965370:intron | 35.0% |
| ATAAGAATTATGGAAGTGGG+TGG | - | chr6_3:92720242-92720261 | Msa0965370:CDS | 35.0% | |
| ! | TGTGTAGTAGGTTCCAATTT+TGG | - | chr6_3:92720268-92720287 | Msa0965370:CDS | 35.0% |
| ! | GTGTAGTAGGTTCCAATTTT+GGG | - | chr6_3:92720269-92720288 | Msa0965370:CDS | 35.0% |
| !! | GCTAAAAAAGCACCCAAAAT+TGG | + | chr6_3:92720284-92720303 | None:intergenic | 35.0% |
| AGCTTGAGAAGCAAATGACA+TGG | + | chr6_3:92714621-92714640 | None:intergenic | 40.0% | |
| GTACATTTCTTTGTGGACAG+CGG | - | chr6_3:92714875-92714894 | Msa0965370:intron | 40.0% | |
| ! | TCATATGGGTTACAAACCTC+TGG | - | chr6_3:92715353-92715372 | Msa0965370:CDS | 40.0% |
| AATTAGACCTCAGACATCCA+AGG | - | chr6_3:92716231-92716250 | Msa0965370:intron | 40.0% | |
| AATGCTGCTATATCCTTCCT+TGG | + | chr6_3:92716251-92716270 | None:intergenic | 40.0% | |
| GTTTCTCAAAACATTCGCAG+TGG | + | chr6_3:92716313-92716332 | None:intergenic | 40.0% | |
| GTTTCTCAAAACATTCGCAG+TGG | + | chr6_3:92716313-92716332 | None:intergenic | 40.0% | |
| TGGGTGGTGATATAACAGAA+TGG | - | chr6_3:92717033-92717052 | Msa0965370:intron | 40.0% | |
| ATATAACAGAATGGTCGGCA+AGG | - | chr6_3:92717042-92717061 | Msa0965370:intron | 40.0% | |
| TGAGTGAATTTGTGAAGGTG+AGG | - | chr6_3:92717393-92717412 | Msa0965370:intron | 40.0% | |
| GAGTGAATTTGTGAAGGTGA+GGG | - | chr6_3:92717394-92717413 | Msa0965370:intron | 40.0% | |
| AATTTGTGAAGGTGAGGGTT+AGG | - | chr6_3:92717399-92717418 | Msa0965370:intron | 40.0% | |
| ! | TATAGTAACCGGGTTGAGTT+TGG | - | chr6_3:92717506-92717525 | Msa0965370:intron | 40.0% |
| GTAAGGGCTTTCTCATATGT+GGG | - | chr6_3:92717551-92717570 | Msa0965370:intron | 40.0% | |
| GAACAGCGTTTAACTGTCAT+TGG | + | chr6_3:92717668-92717687 | None:intergenic | 40.0% | |
| ATTACTAGTCCAACCCAGAT+GGG | + | chr6_3:92718147-92718166 | None:intergenic | 40.0% | |
| AATTACTAGTCCAACCCAGA+TGG | + | chr6_3:92718148-92718167 | None:intergenic | 40.0% | |
| !! | GTCTATAGTTTTGCCTTGGT+TGG | - | chr6_3:92718335-92718354 | Msa0965370:intron | 40.0% |
| CTCTAACACCTGAGTTCTTA+AGG | + | chr6_3:92718362-92718381 | None:intergenic | 40.0% | |
| !! | ATAAGATTAGCTCTAGCAGG+AGG | + | chr6_3:92718392-92718411 | None:intergenic | 40.0% |
| CAGATCAACTTGAGTGGTAA+TGG | + | chr6_3:92718821-92718840 | None:intergenic | 40.0% | |
| GTGGAAAGAGCAAACTAGAT+AGG | + | chr6_3:92718883-92718902 | None:intergenic | 40.0% | |
| TCCAAATTCACACTTGTACC+AGG | - | chr6_3:92719021-92719040 | Msa0965370:intron | 40.0% | |
| TCCTGGTACAAGTGTGAATT+TGG | + | chr6_3:92719025-92719044 | None:intergenic | 40.0% | |
| TACCATAATCCTTTCTCCAC+TGG | - | chr6_3:92719190-92719209 | Msa0965370:intron | 40.0% | |
| !!! | CATGGTCTTATTTTGACCAG+TGG | + | chr6_3:92719209-92719228 | None:intergenic | 40.0% |
| TTTCTCTTCAAAGTGGAGCA+TGG | + | chr6_3:92719227-92719246 | None:intergenic | 40.0% | |
| AAGAGAGCAACTCAAGATGT+TGG | - | chr6_3:92719526-92719545 | Msa0965370:intron | 40.0% | |
| AGCTTGAGAAGCAAATGACA+TGG | + | chr6_3:92714621-92714640 | None:intergenic | 40.0% | |
| !!! | TGCTTTTTTAGCCATACACC+AGG | - | chr6_3:92720292-92720311 | Msa0965370:CDS | 40.0% |
| !!! | GCTTTTTTAGCCATACACCA+GGG | - | chr6_3:92720293-92720312 | Msa0965370:CDS | 40.0% |
| ATATAAAGGTCCCTGGTGTA+TGG | + | chr6_3:92720306-92720325 | None:intergenic | 40.0% | |
| TGTTGGAATCTCAGCGAGTT+CGG | + | chr6_3:92714818-92714837 | None:intergenic | 45.0% | |
| TTGAAAGGATGGGGTAGCTT+TGG | + | chr6_3:92715212-92715231 | None:intergenic | 45.0% | |
| AAGCTACCCCATCCTTTCAA+AGG | - | chr6_3:92715212-92715231 | Msa0965370:intron | 45.0% | |
| AGCTACCCCATCCTTTCAAA+GGG | - | chr6_3:92715213-92715232 | Msa0965370:intron | 45.0% | |
| ! | CGATTCCCTTTGAAAGGATG+GGG | + | chr6_3:92715221-92715240 | None:intergenic | 45.0% |
| ! | GCGATTCCCTTTGAAAGGAT+GGG | + | chr6_3:92715222-92715241 | None:intergenic | 45.0% |
| ! | TCTTGAGGTGTCCACAAACA+GGG | + | chr6_3:92715245-92715264 | None:intergenic | 45.0% |
| ! | TTCTTGAGGTGTCCACAAAC+AGG | + | chr6_3:92715246-92715265 | None:intergenic | 45.0% |
| GACATACTTTCTTCAGCACC+AGG | + | chr6_3:92715475-92715494 | None:intergenic | 45.0% | |
| ATCTACCTTCTCATTGGCGT+TGG | - | chr6_3:92715579-92715598 | Msa0965370:intron | 45.0% | |
| AAACACCAACGCCAATGAGA+AGG | + | chr6_3:92715587-92715606 | None:intergenic | 45.0% | |
| ! | TCAGCACTGAAACATCAGAG+TGG | - | chr6_3:92715794-92715813 | Msa0965370:intron | 45.0% |
| ! | ACATCATTAGCTCTCAAGCC+TGG | - | chr6_3:92715972-92715991 | Msa0965370:intron | 45.0% |
| TATCCTTCCTTGGATGTCTG+AGG | + | chr6_3:92716241-92716260 | None:intergenic | 45.0% | |
| ATCGTTGTCTCAGACATCCA+AGG | - | chr6_3:92716585-92716604 | Msa0965370:intron | 45.0% | |
| TTGTCTCAGACATCCAAGGA+AGG | - | chr6_3:92716589-92716608 | Msa0965370:intron | 45.0% | |
| ACAGCATAAACTCTCAAGCC+TGG | - | chr6_3:92716617-92716636 | Msa0965370:intron | 45.0% | |
| AAGAGGACTCAGAATATGGG+TGG | - | chr6_3:92717017-92717036 | Msa0965370:intron | 45.0% | |
| ATAGGTCTCGTTCGTCGTAA+TGG | + | chr6_3:92717082-92717101 | None:intergenic | 45.0% | |
| GCAGCTGAGTGAATTTGTGA+AGG | - | chr6_3:92717388-92717407 | Msa0965370:intron | 45.0% | |
| CATACGCGTAGGTTAATTCG+CGG | + | chr6_3:92717475-92717494 | None:intergenic | 45.0% | |
| CTCTTGAAATCCATACGCGT+AGG | + | chr6_3:92717486-92717505 | None:intergenic | 45.0% | |
| GGTAAGGGCTTTCTCATATG+TGG | - | chr6_3:92717550-92717569 | Msa0965370:intron | 45.0% | |
| GAGTTCTTAAGGACCAACCA+AGG | + | chr6_3:92718351-92718370 | None:intergenic | 45.0% | |
| ! | TGGTTGGTCCTTAAGAACTC+AGG | - | chr6_3:92718351-92718370 | Msa0965370:intron | 45.0% |
| GCAGATCAGATCAACTTGAG+TGG | + | chr6_3:92718827-92718846 | None:intergenic | 45.0% | |
| AAAAGAATTGACCGGGTGGT+TGG | + | chr6_3:92719087-92719106 | None:intergenic | 45.0% | |
| AGACAAAAGAATTGACCGGG+TGG | + | chr6_3:92719091-92719110 | None:intergenic | 45.0% | |
| GACCAGTGGAGAAAGGATTA+TGG | + | chr6_3:92719195-92719214 | None:intergenic | 45.0% | |
| GAGCAACTCAAGATGTTGGA+AGG | - | chr6_3:92719530-92719549 | Msa0965370:intron | 45.0% | |
| GTATGACGAATCGGAAGTCA+TGG | - | chr6_3:92720016-92720035 | Msa0965370:intron | 45.0% | |
| !!! | TCAATAAAAATAAAAATTTT+GGG | - | chr6_3:92715182-92715201 | Msa0965370:intron | 5.0% |
| !!! | AAAGTTAATTAAAATTTTAT+TGG | + | chr6_3:92715849-92715868 | None:intergenic | 5.0% |
| !!! | ATTTTAAATATTATAATCAT+TGG | - | chr6_3:92716930-92716949 | Msa0965370:intron | 5.0% |
| !!! | TTTTTTAAAGATTTTAAATT+CGG | + | chr6_3:92718296-92718315 | None:intergenic | 5.0% |
| ! | GGCGATTCCCTTTGAAAGGA+TGG | + | chr6_3:92715223-92715242 | None:intergenic | 50.0% |
| ! | CTTGAGGTGTCCACAAACAG+GGG | + | chr6_3:92715244-92715263 | None:intergenic | 50.0% |
| ! | TTAGCTCTCAAGCCTGGCAA+AGG | - | chr6_3:92715978-92715997 | Msa0965370:intron | 50.0% |
| CATTTGCCTTTGCCTTTGCC+AGG | + | chr6_3:92715993-92716012 | None:intergenic | 50.0% | |
| AGACCTCAGACATCCAAGGA+AGG | - | chr6_3:92716235-92716254 | Msa0965370:intron | 50.0% | |
| GCAGCATTAACTCTCAAGCC+TGG | - | chr6_3:92716263-92716282 | Msa0965370:intron | 50.0% | |
| TAACTCTCAAGCCTGGCGAA+AGG | - | chr6_3:92716270-92716289 | Msa0965370:intron | 50.0% | |
| AAGAACTTTCGCCTTTCGCC+AGG | + | chr6_3:92716284-92716303 | None:intergenic | 50.0% | |
| TGGCGAAAGGCGAAAGTTCT+TGG | - | chr6_3:92716283-92716302 | Msa0965370:intron | 50.0% | |
| GGCGAAAGGCGAAAGTTCTT+GGG | - | chr6_3:92716284-92716303 | Msa0965370:intron | 50.0% | |
| GAAAGGCGAAAGTTCTTGGG+CGG | - | chr6_3:92716287-92716306 | Msa0965370:intron | 50.0% | |
| TAAACTCTCAAGCCTGGCGA+AGG | - | chr6_3:92716623-92716642 | Msa0965370:intron | 50.0% | |
| TAAGAACTTTCGCCTTCGCC+AGG | + | chr6_3:92716638-92716657 | None:intergenic | 50.0% | |
| TGGCGAAGGCGAAAGTTCTT+AGG | - | chr6_3:92716637-92716656 | Msa0965370:intron | 50.0% | |
| CGAAGGCGAAAGTTCTTAGG+CGG | - | chr6_3:92716640-92716659 | Msa0965370:intron | 50.0% | |
| TTAATTCGCGGCGCAACTCT+TGG | + | chr6_3:92717463-92717482 | None:intergenic | 50.0% | |
| CGCGAATTAACCTACGCGTA+TGG | - | chr6_3:92717473-92717492 | Msa0965370:intron | 50.0% | |
| ! | CTTTTGGGCCAAACTCAACC+CGG | + | chr6_3:92717517-92717536 | None:intergenic | 50.0% |
| ! | TGACTTTTAACAGGGGCCCT+GGG | - | chr6_3:92718225-92718244 | Msa0965370:intron | 50.0% |
| TCAGTCAATCCTACAGCCCA+GGG | + | chr6_3:92718244-92718263 | None:intergenic | 50.0% | |
| ATCAGTCAATCCTACAGCCC+AGG | + | chr6_3:92718245-92718264 | None:intergenic | 50.0% | |
| CGTACTCGAGTTCGATTACG+AGG | + | chr6_3:92719000-92719019 | None:intergenic | 50.0% | |
| AGTGGGTGGCAATGTGTAGT+AGG | - | chr6_3:92720256-92720275 | Msa0965370:CDS | 50.0% | |
| CAGGGGCGATTCCCTTTGAA+AGG | + | chr6_3:92715227-92715246 | None:intergenic | 55.0% | |
| AAGGGAATCGCCCCTGTTTG+TGG | - | chr6_3:92715231-92715250 | Msa0965370:intron | 55.0% | |
| CTCAAGCCTGGCAAAGGCAA+AGG | - | chr6_3:92715984-92716003 | Msa0965370:intron | 55.0% | |
| ! | CTGACTTTTAACAGGGGCCC+TGG | - | chr6_3:92718224-92718243 | Msa0965370:intron | 55.0% |
| ATGTGACATGGCCTCGCGAA+GGG | - | chr6_3:92718492-92718511 | Msa0965370:intron | 55.0% | |
| CTTCGCGAGGCCATGTCACA+TGG | + | chr6_3:92718493-92718512 | None:intergenic | 60.0% | |
| CATGTGACATGGCCTCGCGA+AGG | - | chr6_3:92718491-92718510 | Msa0965370:intron | 60.0% | |
| GATCCTCTGATCCCTTCGCG+AGG | + | chr6_3:92718506-92718525 | None:intergenic | 60.0% | |
| GCGCTAAGCTTCCAACCACC+CGG | - | chr6_3:92719073-92719092 | Msa0965370:intron | 60.0% | |
| TAACAGGGGCCCTGGGCTGT+AGG | - | chr6_3:92718232-92718251 | Msa0965370:intron | 65.0% | |
| TGGCCTCGCGAAGGGATCAG+AGG | - | chr6_3:92718500-92718519 | Msa0965370:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6_3 | gene | 92714557 | 92720378 | 92714557 | ID=Msa0965370;Name=Msa0965370 |
| chr6_3 | mRNA | 92714557 | 92720378 | 92714557 | ID=Msa0965370-mRNA-1;Parent=Msa0965370;Name=Msa0965370-mRNA-1;_AED=0.01;_eAED=0.01;_QI=0|0|0|1|0.5|1|3|0|139 |
| chr6_3 | exon | 92720241 | 92720378 | 92720241 | ID=Msa0965370-mRNA-1:exon:16925;Parent=Msa0965370-mRNA-1 |
| chr6_3 | exon | 92715256 | 92715393 | 92715256 | ID=Msa0965370-mRNA-1:exon:16924;Parent=Msa0965370-mRNA-1 |
| chr6_3 | exon | 92714557 | 92714700 | 92714557 | ID=Msa0965370-mRNA-1:exon:16923;Parent=Msa0965370-mRNA-1 |
| chr6_3 | CDS | 92720241 | 92720378 | 92720241 | ID=Msa0965370-mRNA-1:cds;Parent=Msa0965370-mRNA-1 |
| chr6_3 | CDS | 92715256 | 92715393 | 92715256 | ID=Msa0965370-mRNA-1:cds;Parent=Msa0965370-mRNA-1 |
| chr6_3 | CDS | 92714557 | 92714700 | 92714557 | ID=Msa0965370-mRNA-1:cds;Parent=Msa0965370-mRNA-1 |
| Gene Sequence |
| Protein sequence |
